View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19791_low_19 (Length: 266)
Name: NF19791_low_19
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19791_low_19 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 28685540 - 28685276
Alignment:
| Q |
1 |
atctggttagctaaatagataaagtacatcaaagttatcgtgattactctatcaaaagtaaattacaaaataaaaacaatatgcttcagtatcagacaac |
100 |
Q |
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| T |
28685540 |
atctggttagctaaatagataaagtacatcagagttatcgtgattactctgtcaaaagtaaattataaaataaaaacaatatgcttcagtatcagacaac |
28685441 |
T |
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| Q |
101 |
tggtaataacaaaacaataaaagctactaaatatacaggctaacaacatccaattgaacaaaacagataatatgtttagtattctcaagaaaacatgtcc |
200 |
Q |
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| T |
28685440 |
tggtaataacaaaataataaaagcaactaaatatacaggctaacaacatccaattgaacaaaacagataatatgtttagtgttct-aagacaacatgtcc |
28685342 |
T |
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| Q |
201 |
gatgtacaactcgttgtgtcatttcattcaattaggtgaatttctcaaataattaatggtgtgtgt |
266 |
Q |
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|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
28685341 |
gatgtacaactcattgtgtcatttcattcaattatgtgaatttctcaaataattaatggtgtgtgt |
28685276 |
T |
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