View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19791_low_9 (Length: 334)

Name: NF19791_low_9
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19791_low_9
NF19791_low_9
[»] chr8 (39 HSPs)
chr8 (1-315)||(15047036-15047350)
chr8 (1-101)||(4809108-4809208)
chr8 (7-106)||(33299004-33299103)
chr8 (1-101)||(2656014-2656114)
chr8 (1-101)||(27746955-27747054)
chr8 (1-101)||(37565719-37565819)
chr8 (1-101)||(43889964-43890064)
chr8 (1-80)||(44578174-44578253)
chr8 (1-94)||(34611948-34612041)
chr8 (1-101)||(11464315-11464415)
chr8 (5-101)||(23851334-23851430)
chr8 (1-101)||(43135419-43135519)
chr8 (9-80)||(42447888-42447959)
chr8 (3-101)||(11725826-11725924)
chr8 (1-102)||(33342578-33342679)
chr8 (1-101)||(9619197-9619297)
chr8 (1-101)||(14906763-14906863)
chr8 (1-101)||(28239985-28240085)
chr8 (9-101)||(44099776-44099868)
chr8 (1-100)||(43192188-43192287)
chr8 (11-101)||(11267162-11267252)
chr8 (1-101)||(9498439-9498539)
chr8 (1-101)||(11197027-11197127)
chr8 (1-101)||(29777363-29777463)
chr8 (1-102)||(33896226-33896331)
chr8 (1-80)||(9072862-9072941)
chr8 (1-80)||(32724342-32724421)
chr8 (1-80)||(35580600-35580679)
chr8 (14-106)||(16794448-16794540)
chr8 (1-101)||(39152982-39153083)
chr8 (1-101)||(8441329-8441428)
chr8 (1-44)||(19876354-19876397)
chr8 (5-79)||(15597030-15597104)
chr8 (29-101)||(3240540-3240611)
chr8 (10-101)||(24186519-24186609)
chr8 (31-74)||(43431913-43431956)
chr8 (5-58)||(17949383-17949434)
chr8 (106-135)||(9637194-9637223)
chr8 (106-135)||(17426995-17427024)
[»] chr6 (35 HSPs)
chr6 (1-101)||(33110748-33110848)
chr6 (1-101)||(10228816-10228916)
chr6 (1-101)||(16419295-16419395)
chr6 (1-101)||(4088597-4088697)
chr6 (1-101)||(4984407-4984507)
chr6 (1-101)||(8027958-8028058)
chr6 (1-101)||(16892656-16892756)
chr6 (1-101)||(17237126-17237226)
chr6 (1-101)||(17334890-17334990)
chr6 (1-101)||(35001727-35001827)
chr6 (1-95)||(12653081-12653175)
chr6 (1-101)||(12059613-12059713)
chr6 (3-101)||(28634953-28635051)
chr6 (1-70)||(7880973-7881042)
chr6 (1-102)||(8196246-8196347)
chr6 (1-101)||(8497104-8497205)
chr6 (1-101)||(23947157-23947258)
chr6 (1-65)||(4468695-4468759)
chr6 (9-101)||(25064381-25064473)
chr6 (5-101)||(33740418-33740514)
chr6 (1-61)||(7028000-7028060)
chr6 (1-100)||(25337702-25337801)
chr6 (1-70)||(7875915-7875984)
chr6 (16-101)||(30608375-30608459)
chr6 (1-65)||(34489358-34489421)
chr6 (1-60)||(20619604-20619663)
chr6 (1-89)||(1704004-1704091)
chr6 (1-33)||(12165976-12166008)
chr6 (11-44)||(4351902-4351935)
chr6 (31-100)||(7976048-7976117)
chr6 (106-135)||(19164838-19164867)
chr6 (106-135)||(31297093-31297122)
chr6 (106-134)||(12170742-12170770)
chr6 (17-101)||(29319737-29319821)
chr6 (12-80)||(33543485-33543553)
[»] chr4 (48 HSPs)
chr4 (1-101)||(25274032-25274132)
chr4 (1-98)||(10359391-10359488)
chr4 (1-101)||(9528717-9528817)
chr4 (1-101)||(44947561-44947661)
chr4 (1-80)||(43153875-43153954)
chr4 (1-101)||(4644007-4644107)
chr4 (1-101)||(9645364-9645464)
chr4 (5-101)||(38706550-38706646)
chr4 (1-101)||(51318134-51318234)
chr4 (1-93)||(52097764-52097856)
chr4 (1-101)||(53616490-53616590)
chr4 (1-80)||(27593690-27593769)
chr4 (8-80)||(12265618-12265690)
chr4 (1-101)||(34024278-34024378)
chr4 (1-101)||(43444541-43444641)
chr4 (1-101)||(45227881-45227981)
chr4 (1-101)||(49410372-49410472)
chr4 (9-100)||(1532065-1532156)
chr4 (1-80)||(10389615-10389694)
chr4 (1-80)||(18138775-18138854)
chr4 (1-80)||(49125988-49126067)
chr4 (7-101)||(9284066-9284160)
chr4 (1-65)||(868311-868376)
chr4 (1-70)||(6972959-6973028)
chr4 (1-101)||(21090291-21090391)
chr4 (1-65)||(50766388-50766452)
chr4 (1-101)||(56199245-56199345)
chr4 (1-100)||(2115429-2115528)
chr4 (1-66)||(32952626-32952691)
chr4 (8-101)||(46990971-46991064)
chr4 (1-65)||(1931627-1931691)
chr4 (1-101)||(3336004-3336104)
chr4 (5-101)||(35261345-35261441)
chr4 (7-74)||(35964843-35964910)
chr4 (5-80)||(49680690-49680765)
chr4 (8-65)||(47417818-47417875)
chr4 (1-101)||(20569404-20569506)
chr4 (1-44)||(29965784-29965827)
chr4 (1-99)||(37188437-37188535)
chr4 (12-44)||(7273711-7273743)
chr4 (3-35)||(31381578-31381610)
chr4 (106-138)||(56040430-56040462)
chr4 (1-44)||(14183951-14183993)
chr4 (106-135)||(2521072-2521101)
chr4 (106-135)||(26633458-26633487)
chr4 (106-135)||(56156435-56156464)
chr4 (103-135)||(35964750-35964782)
chr4 (103-135)||(47417945-47417977)
[»] chr1 (55 HSPs)
chr1 (1-101)||(11709547-11709647)
chr1 (5-101)||(45425906-45426002)
chr1 (1-101)||(25406124-25406224)
chr1 (1-101)||(38520375-38520475)
chr1 (1-95)||(50271986-50272080)
chr1 (1-74)||(30818218-30818291)
chr1 (1-101)||(5701400-5701500)
chr1 (1-101)||(7997930-7998030)
chr1 (1-101)||(9687045-9687145)
chr1 (1-93)||(18569159-18569251)
chr1 (1-101)||(19715735-19715835)
chr1 (1-102)||(50148511-50148612)
chr1 (1-101)||(40880853-40880953)
chr1 (1-101)||(50165939-50166039)
chr1 (1-101)||(51868485-51868585)
chr1 (1-101)||(51872004-51872104)
chr1 (1-80)||(28035280-28035359)
chr1 (5-79)||(5324420-5324494)
chr1 (5-101)||(19723458-19723554)
chr1 (1-101)||(33291258-33291358)
chr1 (5-80)||(3871553-3871628)
chr1 (2-101)||(20266444-20266543)
chr1 (5-98)||(7311949-7312042)
chr1 (1-101)||(7342863-7342963)
chr1 (1-101)||(9172631-9172731)
chr1 (1-101)||(9180613-9180713)
chr1 (8-100)||(39927396-39927488)
chr1 (1-101)||(11454076-11454178)
chr1 (19-102)||(48217596-48217679)
chr1 (1-67)||(14545658-14545724)
chr1 (1-102)||(9919530-9919630)
chr1 (12-101)||(27872889-27872978)
chr1 (2-102)||(31130432-31130532)
chr1 (1-101)||(32676975-32677070)
chr1 (1-101)||(34519269-34519369)
chr1 (1-101)||(41081544-41081644)
chr1 (1-101)||(45805669-45805768)
chr1 (1-80)||(33817029-33817108)
chr1 (1-80)||(33876499-33876578)
chr1 (1-101)||(35584462-35584558)
chr1 (1-80)||(40646815-40646894)
chr1 (1-65)||(39987529-39987592)
chr1 (1-80)||(27914965-27915044)
chr1 (15-102)||(31836989-31837076)
chr1 (1-94)||(30879216-30879309)
chr1 (1-80)||(48365627-48365706)
chr1 (31-100)||(19061071-19061140)
chr1 (16-101)||(47133051-47133135)
chr1 (16-95)||(32679007-32679085)
chr1 (101-135)||(24597109-24597143)
chr1 (106-135)||(3228548-3228577)
chr1 (106-135)||(21687654-21687683)
chr1 (52-101)||(27456667-27456716)
chr1 (16-101)||(37720009-37720093)
chr1 (52-93)||(39888365-39888406)
[»] chr5 (40 HSPs)
chr5 (1-102)||(43148866-43148967)
chr5 (1-95)||(781527-781621)
chr5 (1-102)||(4954131-4954232)
chr5 (7-100)||(34881862-34881955)
chr5 (1-101)||(7247098-7247198)
chr5 (1-101)||(27752064-27752164)
chr5 (1-80)||(19259673-19259752)
chr5 (1-95)||(15571046-15571140)
chr5 (1-95)||(18677311-18677405)
chr5 (1-101)||(27266699-27266799)
chr5 (1-101)||(30298983-30299083)
chr5 (10-101)||(7241932-7242023)
chr5 (8-102)||(28235731-28235827)
chr5 (1-101)||(3271242-3271342)
chr5 (1-94)||(16981429-16981524)
chr5 (1-101)||(20257536-20257636)
chr5 (1-101)||(41184280-41184380)
chr5 (1-80)||(2057699-2057778)
chr5 (1-80)||(42886617-42886696)
chr5 (1-74)||(10649783-10649856)
chr5 (6-95)||(11768143-11768232)
chr5 (1-74)||(21060150-21060223)
chr5 (13-101)||(7612898-7612986)
chr5 (5-65)||(26578395-26578455)
chr5 (1-80)||(19280807-19280885)
chr5 (1-74)||(35475205-35475278)
chr5 (5-101)||(22978764-22978860)
chr5 (1-74)||(30298346-30298421)
chr5 (1-65)||(42580027-42580091)
chr5 (5-80)||(7150196-7150271)
chr5 (18-101)||(43008155-43008238)
chr5 (1-101)||(7886779-7886878)
chr5 (1-44)||(43261716-43261759)
chr5 (1-58)||(41418605-41418662)
chr5 (8-100)||(13468744-13468835)
chr5 (17-102)||(11976794-11976878)
chr5 (16-101)||(13422077-13422161)
chr5 (17-93)||(25980302-25980377)
chr5 (103-135)||(37483320-37483352)
chr5 (17-93)||(38597942-38598017)
[»] scaffold0495 (1 HSPs)
scaffold0495 (1-101)||(5535-5635)
[»] chr2 (45 HSPs)
chr2 (1-101)||(9986182-9986282)
chr2 (1-102)||(8971467-8971568)
chr2 (1-69)||(4192978-4193046)
chr2 (1-101)||(8806007-8806107)
chr2 (1-101)||(27248991-27249091)
chr2 (1-100)||(32678952-32679050)
chr2 (5-102)||(27477293-27477390)
chr2 (5-106)||(32913385-32913486)
chr2 (1-70)||(34600355-34600424)
chr2 (1-101)||(84021-84121)
chr2 (1-101)||(41431169-41431269)
chr2 (1-100)||(38575326-38575425)
chr2 (1-79)||(2808334-2808412)
chr2 (1-102)||(4228263-4228365)
chr2 (1-94)||(7015558-7015651)
chr2 (1-93)||(21570256-21570348)
chr2 (1-75)||(33229006-33229080)
chr2 (1-101)||(3725321-3725421)
chr2 (1-101)||(17319461-17319561)
chr2 (1-101)||(40659772-40659872)
chr2 (1-102)||(41712628-41712729)
chr2 (1-101)||(20046922-20047022)
chr2 (1-101)||(27949567-27949667)
chr2 (1-60)||(6173773-6173832)
chr2 (1-80)||(45128345-45128424)
chr2 (7-72)||(459144-459209)
chr2 (1-101)||(25087178-25087277)
chr2 (1-44)||(36234149-36234192)
chr2 (1-101)||(22421869-22421969)
chr2 (1-101)||(40625897-40625997)
chr2 (30-101)||(31580495-31580566)
chr2 (16-102)||(30399889-30399974)
chr2 (8-70)||(37613997-37614059)
chr2 (16-106)||(37994439-37994528)
chr2 (9-58)||(9374450-9374499)
chr2 (104-135)||(17319590-17319621)
chr2 (27-92)||(3268684-3268749)
chr2 (106-135)||(4903933-4903962)
chr2 (106-135)||(31193124-31193153)
chr2 (52-93)||(32190854-32190895)
chr2 (106-135)||(38445449-38445478)
chr2 (17-101)||(7646634-7646717)
chr2 (106-138)||(17994505-17994537)
chr2 (46-102)||(30420855-30420911)
chr2 (5-65)||(37876503-37876562)
[»] chr3 (44 HSPs)
chr3 (1-102)||(25631365-25631466)
chr3 (1-101)||(25162570-25162670)
chr3 (1-101)||(39917238-39917338)
chr3 (1-101)||(49552064-49552164)
chr3 (1-102)||(29503595-29503696)
chr3 (1-101)||(36906256-36906356)
chr3 (1-101)||(38854876-38854976)
chr3 (1-101)||(44907239-44907339)
chr3 (7-80)||(12116238-12116311)
chr3 (1-101)||(3848759-3848859)
chr3 (1-101)||(22803164-22803264)
chr3 (1-101)||(32607603-32607703)
chr3 (1-80)||(17237939-17238018)
chr3 (1-70)||(4178699-4178768)
chr3 (1-98)||(42719651-42719748)
chr3 (7-95)||(21488233-21488321)
chr3 (1-101)||(46178702-46178802)
chr3 (5-100)||(30648560-30648655)
chr3 (1-101)||(46934776-46934873)
chr3 (2-95)||(14464645-14464738)
chr3 (1-101)||(35499040-35499138)
chr3 (1-70)||(50611289-50611358)
chr3 (5-65)||(36734569-36734629)
chr3 (1-44)||(2342597-2342640)
chr3 (4-44)||(51202151-51202191)
chr3 (5-102)||(21916611-21916708)
chr3 (12-65)||(37169374-37169427)
chr3 (29-101)||(50194195-50194267)
chr3 (1-96)||(25849943-25850038)
chr3 (52-101)||(51628988-51629037)
chr3 (103-135)||(38859922-38859954)
chr3 (17-100)||(4711627-4711709)
chr3 (52-102)||(6903105-6903155)
chr3 (31-101)||(43017046-43017116)
chr3 (106-135)||(953332-953361)
chr3 (106-135)||(19339447-19339476)
chr3 (106-135)||(23799735-23799764)
chr3 (16-101)||(27856309-27856393)
chr3 (51-100)||(30293348-30293397)
chr3 (1-70)||(31794204-31794272)
chr3 (106-135)||(40487597-40487626)
chr3 (106-135)||(46304308-46304337)
chr3 (17-93)||(40487470-40487545)
chr3 (17-93)||(44959841-44959916)
[»] chr7 (48 HSPs)
chr7 (1-101)||(433531-433631)
chr7 (1-101)||(32684805-32684905)
chr7 (1-100)||(17222841-17222940)
chr7 (1-100)||(35261434-35261533)
chr7 (1-74)||(1448697-1448770)
chr7 (1-102)||(13592348-13592449)
chr7 (1-102)||(22927709-22927810)
chr7 (1-101)||(42311417-42311515)
chr7 (1-101)||(26492502-26492602)
chr7 (1-101)||(46822152-46822252)
chr7 (1-102)||(20083475-20083576)
chr7 (1-101)||(26583846-26583947)
chr7 (1-94)||(31235631-31235724)
chr7 (9-106)||(32521764-32521861)
chr7 (1-101)||(48208037-48208138)
chr7 (1-101)||(2843081-2843181)
chr7 (1-101)||(7640615-7640715)
chr7 (1-101)||(20116719-20116818)
chr7 (1-101)||(34773848-34773948)
chr7 (5-80)||(35496036-35496111)
chr7 (1-65)||(19560135-19560199)
chr7 (5-101)||(21266531-21266627)
chr7 (1-101)||(23085658-23085758)
chr7 (1-101)||(23786712-23786812)
chr7 (1-101)||(35667072-35667172)
chr7 (1-101)||(45198873-45198973)
chr7 (1-101)||(1485096-1485197)
chr7 (1-70)||(6559014-6559083)
chr7 (1-74)||(17499548-17499621)
chr7 (1-74)||(17553593-17553666)
chr7 (1-74)||(42066929-42067002)
chr7 (1-80)||(46818279-46818359)
chr7 (1-83)||(6002166-6002246)
chr7 (7-70)||(23425244-23425307)
chr7 (1-101)||(46339191-46339291)
chr7 (1-43)||(14627777-14627819)
chr7 (5-58)||(17611250-17611303)
chr7 (16-93)||(38798928-38799004)
chr7 (104-135)||(46244038-46244069)
chr7 (10-80)||(27341691-27341760)
chr7 (101-135)||(42978876-42978910)
chr7 (101-135)||(42979049-42979083)
chr7 (7-101)||(43369614-43369707)
chr7 (106-135)||(4999805-4999834)
chr7 (31-80)||(5348473-5348522)
chr7 (106-135)||(12141094-12141123)
chr7 (106-135)||(46821528-46821557)
chr7 (106-135)||(48061697-48061726)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-65)||(8828-8892)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-80)||(16181-16260)
[»] scaffold0022 (1 HSPs)
scaffold0022 (2-101)||(83276-83377)
[»] scaffold0426 (1 HSPs)
scaffold0426 (3-80)||(6444-6521)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-62)||(201252-201313)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-74)||(361666-361733)
[»] scaffold0445 (1 HSPs)
scaffold0445 (17-93)||(1490-1565)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-45)||(454056-454094)
[»] scaffold0136 (1 HSPs)
scaffold0136 (106-135)||(38333-38362)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-101)||(57948-58032)


Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 15047036 - 15047350
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||| ||||||||||||    
T  15047036 attccgattactttaattttatcatatatttttgtaggcattataccgttatatgctattaacttgaatgttgtaagtttgttcgcagattcatctttta 15047135  T
Q  101 caatttgaatgaatatcgttttgtttttgtaaaaacaagggtagagcaggtataccatttaaaatacatttcacaaggttctcgtgaagtattgtttatt 200  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15047136 cgatttgaatgaatatcgttttgtttttgtaaaaacaggggtagagcaggtataccatttagaatacatttcacaaggttctcgtgaagtattgtttatt 15047235  T
Q  201 gcaattgtgttattttgtaaaatattaaacaaaacttcctaactataaataatacagtagctggttaagaacaatactttcatgctaataattgtgttct 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15047236 gcaattgtgttattttgtaaaatattaaacaaaacttcctagctataaataatactgtagctggttaagaacaatactttcatgctaataattgtgttct 15047335  T
Q  301 cctctaatggcttca 315  Q
    |||||||||||||||    
T  15047336 cctctaatggcttca 15047350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4809108 - 4809208
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| || ||| ||||||| ||||    
T  4809108 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatccttta 4809207  T
Q  101 c 101  Q
    |    
T  4809208 c 4809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 33299004 - 33299103
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttacaattt 106  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| || ||| ||||||| ||||||||||    
T  33299004 gtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcatttacaattt 33299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2656014 - 2656114
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || ||||||||||||||| |||| ||| ||||| || ||||||||||| ||||    
T  2656014 attccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcattta 2656113  T
Q  101 c 101  Q
    |    
T  2656114 c 2656114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27747054 - 27746955
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||| |||| ||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||| ||||||| ||||    
T  27747054 attccggtcacttttattt-atcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtaaatttatttgcagattcatcattta 27746956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37565819 - 37565719
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||||| |||| ||| ||||| || ||||||||||| ||||    
T  37565819 attccggtcactttgattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatccttta 37565720  T
Q  101 c 101  Q
    |    
T  37565719 c 37565719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43890064 - 43889964
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| | ||| |||||| ||||||| ||||    
T  43890064 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgattttgtttgcagattcatccttta 43889965  T
Q  101 c 101  Q
    |    
T  43889964 c 43889964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44578174 - 44578253
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| |||||||||    
T  44578174 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtaagttt 44578253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34611948 - 34612041
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcat 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||| |||||||| ||||| || ||| ||||||    
T  34611948 attccggtcactttaattttatcatatatttttgtaggcattatcttgttatatgctattaacttggatgttgtgagtttgttcgcagattcat 34612041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11464315 - 11464415
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || | | ||||||| ||||    
T  11464315 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatccttta 11464414  T
Q  101 c 101  Q
    |    
T  11464415 c 11464415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 23851430 - 23851334
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||| || ||| ||| |||||||||    
T  23851430 cggtaactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttagatgttgtgagtttgttcgcagatttatcttttac 23851334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43135519 - 43135419
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||| |||||||| ||| | || ||||||||||| ||||    
T  43135519 attctggtcactttaattttatcatatattttcgtaggcattatgccgttatatgttattaacttggatgttgtgagtatgttcgcaaattcatcattta 43135420  T
Q  101 c 101  Q
    |    
T  43135419 c 43135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 42447959 - 42447888
Alignment:
Q  9 cactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||    
T  42447959 cactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagttt 42447888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 11725826 - 11725924
Alignment:
Q  3 tccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| ||  || ||||||| |||||    
T  11725826 tccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttac 11725924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33342578 - 33342679
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||  ||| ||| ||||| || ||| ||||||| ||||    
T  33342578 attcaggtcactttaattttatcatatatatttgtaggcattatgccgttatatgctattaacttgaatgctgtgagtttgttcgcagattcatcattta 33342677  T
Q  101 ca 102  Q
    ||    
T  33342678 ca 33342679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9619297 - 9619197
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||| | ||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  9619297 attccggtcactttaatttcatcatatatttttgtaagtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 9619198  T
Q  101 c 101  Q
    |    
T  9619197 c 9619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14906863 - 14906763
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||| |||  ||| ||||| || ||| ||||||| ||||    
T  14906863 attccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgcagattcatccttta 14906764  T
Q  101 c 101  Q
    |    
T  14906763 c 14906763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28239985 - 28240085
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||| |||| ||||||||||||||| ||| ||||| ||  || ||||||| ||||    
T  28239985 attccggtcactttaattttatcatttatttttgtaagcattatgccgttatattctattaacttagatgctgtgagtttgttcacagattcatccttta 28240084  T
Q  101 c 101  Q
    |    
T  28240085 c 28240085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 44099868 - 44099776
Alignment:
Q  9 cactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| |||||    
T  44099868 cactttaattttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttac 44099776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43192287 - 43192188
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| |||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||| |||||| | ||||| || ||| ||||||| ||||    
T  43192287 attccgatcactttaattttatcatatatttttgtatccattatgccgttatatgctattaacttggatgttctgagtttgttcgcagattcatccttta 43192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 11267162 - 11267252
Alignment:
Q  11 ctttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || |||  |||||| |||||    
T  11267162 ctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagtttcatcctttac 11267252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9498539 - 9498439
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| || | ||||||||||||||| |||| ||| ||||| ||  || ||||||| ||||    
T  9498539 attcctgtcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacttggatgctgtgagtttgttcacagattcatccttta 9498440  T
Q  101 c 101  Q
    |    
T  9498439 c 9498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11197027 - 11197127
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| | || ||||||||||||||| |||| ||| ||||| ||| || ||| ||| ||||    
T  11197027 attccgatcactttaattttattatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgtttacagatttatcattta 11197126  T
Q  101 c 101  Q
    |    
T  11197127 c 11197127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29777363 - 29777463
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||| |||||||||||||||| |||||||||  ||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  29777363 attccggtgactttaatattatcatatatttttggaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 29777462  T
Q  101 c 101  Q
    |    
T  29777463 c 29777463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33896226 - 33896331
Alignment:
Q  1 attccggtcactttaattttatc----atatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatct 96  Q
    |||||||| ||||||||||||||    ||||||||||||||||||||| | || ||||||||||||||| |||||||| ||||| || ||| |||||||     
T  33896226 attccggtgactttaattttatctatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagttttttcgcagattcatcc 33896325  T
Q  97 tttaca 102  Q
    ||||||    
T  33896326 tttaca 33896331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9072862 - 9072941
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||| | ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||| ||| |||||    
T  9072862 attccgatgactttaattttatcatatatttttgtatgcattattccgttatatgctattaacttggatgctgtgagttt 9072941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32724421 - 32724342
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  ||| |||| |||||||||| |||||||| |||||    
T  32724421 attccggtcactttaatcttatcttatatttttgtaggcattatgtcgttatatactattaacttggatgttgtgagttt 32724342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35580600 - 35580679
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || | ||| |||||||| |||||||| || |||||    
T  35580600 attccggtcactttagttttatcatatatttttgtaggcattatgccattatacgctattaatttagatgtagtgagttt 35580679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 16794448 - 16794540
Alignment:
Q  14 taattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttacaattt 106  Q
    |||||||||||||||||||||||| ||||||  ||| ||||| ||||||||| |||||||| ||||| || ||| ||||||| ||||| ||||    
T  16794448 taattttatcatatatttttgtagacattatgacgttatatggtattaacttggatgttgtgagtttgttcgcagattcatcctttactattt 16794540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39153083 - 39152982
Alignment:
Q  1 attccggtcactttaattttatcatatat-ttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    |||||| |||||||||||||||||||||| |||||||||||||||   || || |||||||||||||||||||   ||||| || ||| ||||||| |||    
T  39153083 attccgatcactttaattttatcatatattttttgtaggcattatgttgttatgtgctattaacttagatgttaagagtttgttcgcagattcatccttt 39152984  T
Q  100 ac 101  Q
    ||    
T  39152983 ac 39152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8441329 - 8441428
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| | |||||||||||||||||| | |||| ||| ||| || |||  ||||||||||| ||||||| | | |||||||||||||||||||||||||    
T  8441329 attccgataactttaattttatcatat-tatttgcaggtattttatcgttgtatgctattaatttagatgatatgagtttatttgcaaattcatctttta 8441427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19876354 - 19876397
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19876354 attccggtcactttaatttgatcatatatttttgtaggcattat 19876397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 15597104 - 15597030
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtt 79  Q
    |||||||||||||||| ||||||| ||||||| |||||||  ||  ||||||||||||||  |||||||||||||    
T  15597104 cggtcactttaattttctcatatacttttgtatgcattatgtcgatatatgctattaactcggatgttgtaagtt 15597030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 3240540 - 3240611
Alignment:
Q  29 tttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||| |||| | |||| ||||||||||||||| |||||||| |||||||| ||| ||||||| |||||    
T  3240540 tttttgtag-cattttgccgttatatgctattaacttggatgttgtgagtttattcgcagattcatcctttac 3240611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 24186609 - 24186519
Alignment:
Q  10 actttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| ||||||||||||| | ||| |||||||| | ||||| ||| |||||||||||| |||| | ||||| || ||| |||||||||||||    
T  24186609 acttaaattttatcatat-tatttataggcattttgccgtcgtatactattaacttaggtgttatgagtttgttagcagattcatcttttac 24186519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 43431913 - 43431956
Alignment:
Q  31 tttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||    
T  43431913 tttgtaagcattttaccgtcatatgctattaacttggatgttgt 43431956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 17949383 - 17949434
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgcta 58  Q
    ||||||||||||||||||||||||  |||||||||||||| | || ||||||||    
T  17949383 cggtcactttaattttatcatata--tttgtaggcattatgctgttatatgcta 17949434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 9637223 - 9637194
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  9637223 tgaatgaatatcgttttgtttttgtaaaaa 9637194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 17427024 - 17426995
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  17427024 tgaatgaatatcgttttgtttttgtaaaaa 17426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33110748 - 33110848
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  33110748 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttatttgcatattcatccttta 33110847  T
Q  101 c 101  Q
    |    
T  33110848 c 33110848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10228816 - 10228916
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||  ||||||||| || ||||||||||| ||||    
T  10228816 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatccttta 10228915  T
Q  101 c 101  Q
    |    
T  10228916 c 10228916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16419295 - 16419395
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||| ||||| || ||| ||||||||||||    
T  16419295 attccggtgactttaattttatcatatatttttgtaggcattatgccgtcatatgctattaacttgattgttgtgagtttgttcgcagattcatctttta 16419394  T
Q  101 c 101  Q
    |    
T  16419395 c 16419395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4088597 - 4088697
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  4088597 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgccattaacttggatgctgtgagtttgttcgcagattcatccttta 4088696  T
Q  101 c 101  Q
    |    
T  4088697 c 4088697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4984507 - 4984407
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||| ||||||||| || ||| ||||||| ||||    
T  4984507 attccgatcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgcagattcatccttta 4984408  T
Q  101 c 101  Q
    |    
T  4984407 c 4984407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8028058 - 8027958
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||| |||| ||| ||||| || ||||||||||| ||||    
T  8028058 attccagtcactttaattttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgcaaattcatccttta 8027959  T
Q  101 c 101  Q
    |    
T  8027958 c 8027958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16892756 - 16892656
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||||||| || ||| | ||||| ||||    
T  16892756 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtcgtaagtttgttcgcagaatcatcattta 16892657  T
Q  101 c 101  Q
    |    
T  16892656 c 16892656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17237226 - 17237126
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||| | || ||| ||||||| ||||    
T  17237226 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatccttta 17237127  T
Q  101 c 101  Q
    |    
T  17237126 c 17237126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17334890 - 17334990
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  17334890 attccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcattta 17334989  T
Q  101 c 101  Q
    |    
T  17334990 c 17334990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35001727 - 35001827
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||| ||| ||||    
T  35001727 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattaatccttta 35001826  T
Q  101 c 101  Q
    |    
T  35001827 c 35001827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12653081 - 12653175
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||| ||||| || ||| |||||||    
T  12653081 attccggtcgctttaattttatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatc 12653175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12059713 - 12059613
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||| |||||||||| |||||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  12059713 attccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 12059614  T
Q  101 c 101  Q
    |    
T  12059613 c 12059613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 28635051 - 28634953
Alignment:
Q  3 tccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||| |||||||| ||||| ||  || ||||||| |||||    
T  28635051 tccggtcactttaattttatcatgtatttttgtaggcattatgccgttatatgcgattaacttggatgttgtgagtttgttcacagattcatcctttac 28634953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7881042 - 7880973
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  7881042 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatg 7880973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8196347 - 8196246
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||  ||| ||||||||||||||| |||| ||| ||| | || ||||||||||| ||||    
T  8196347 attccggtcactttaattttatcgcatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtgtgttcgcaaattcatccttta 8196248  T
Q  101 ca 102  Q
    ||    
T  8196247 ca 8196246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8497104 - 8497205
Alignment:
Q  1 attccggtcactttaattttatcatatatttt-tgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| |||    
T  8497104 attccggtcactttaatttcatcatatattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 8497203  T
Q  100 ac 101  Q
    ||    
T  8497204 ac 8497205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23947258 - 23947157
Alignment:
Q  1 attccggtcactttaa-ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| || | | ||||||| |||    
T  23947258 attctggtcactttaaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgtagattcatccttt 23947159  T
Q  100 ac 101  Q
    ||    
T  23947158 ac 23947157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4468695 - 4468759
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  4468695 attccggccactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactt 4468759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 25064381 - 25064473
Alignment:
Q  9 cactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| |||||    
T  25064381 cactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 25064473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 33740514 - 33740418
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||  ||| ||||| || ||| ||||||| |||||    
T  33740514 cggtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttac 33740418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7028000 - 7028060
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctatta 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  7028000 attccggtcactttaattttatcatatatttttgtaggcattatggcgttatatgctatta 7028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25337702 - 25337801
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||  || ||||| |||||||||  ||| ||||||||| || ||| ||||||| ||||    
T  25337702 attccagtcaccttaattttatcatatatttttgtaggcattatattgttatatgatattaacttgaatggtgtaagtttgttcgcacattcatcattta 25337801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7875984 - 7875915
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    |||||| |||||||||||| |||||||||||||||||||||||| | || ||||||||||||||| ||||    
T  7875984 attccgatcactttaatttcatcatatatttttgtaggcattatgcagttatatgctattaacttggatg 7875915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 30608459 - 30608375
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||| | |||||||||||| ||||||  |||||||||||||| |||||||| || || |||||||||||||| |||||    
T  30608459 attttatcatat-tatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttac 30608375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34489358 - 34489421
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||||    
T  34489358 attccggtcactttaattttatc-tatatttttgtagccattatgtcgttatatgctattaactt 34489421  T

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Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20619604 - 20619663
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctatt 60  Q
    |||||||||||||||||||||||||||||||||||| | |||||  ||| ||||||||||    
T  20619604 attccggtcactttaattttatcatatatttttgtatgaattatgtcgttatatgctatt 20619663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1704091 - 1704004
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaa 89  Q
    ||||| |||||||||||| |||||||| | ||| ||| |||| |  |||  || |||||||||||| ||||||||||||||||||||||    
T  1704091 attccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaa 1704004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12165976 - 12166008
Alignment:
Q  1 attccggtcactttaattttatcatatattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  12165976 attccggtcactttaattttatcatatattttt 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 4351935 - 4351902
Alignment:
Q  11 ctttaattttatcatatatttttgtaggcattat 44  Q
    ||||||| ||||||||||||||||||||||||||    
T  4351935 ctttaatgttatcatatatttttgtaggcattat 4351902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 7976117 - 7976048
Alignment:
Q  31 tttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||| | ||||  |||||||||||||||| |||||| ||||| || ||| ||||||| ||||    
T  7976117 tttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatccttta 7976048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 19164838 - 19164867
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  19164838 tgaatgaatatcgttttgtttttgtaaaaa 19164867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 31297093 - 31297122
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  31297093 tgaatgaatatcgttttgtttttgtaaaaa 31297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 12170742 - 12170770
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaa 134  Q
    |||||||||||||||||||||||||||||    
T  12170742 tgaatgaatatcgttttgtttttgtaaaa 12170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 29319821 - 29319737
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||  ||||||| ||||| ||||||  |||||||||||||| | |||| | ||||| || ||| ||||| |||||||    
T  29319821 ttttatcatattattttgtaagcattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttac 29319737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 33543553 - 33543485
Alignment:
Q  12 tttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||| |||||||||||||| |||||||  |  |||| |||||||||  |||||||| |||||    
T  33543553 tttaattttattatatatttttgtagacattatattgctatatactattaactcggatgttgtgagttt 33543485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25274032 - 25274132
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| ||||| || ||| ||||||| ||||    
T  25274032 attccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttagatgttgtgagtttgttcgcagattcatccttta 25274131  T
Q  101 c 101  Q
    |    
T  25274132 c 25274132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10359488 - 10359391
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttt 98  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||||||||||||||    
T  10359488 attccagtcactttatttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcaaattcatcttt 10359391  T

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Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9528817 - 9528717
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||| || ||| ||||||| ||||    
T  9528817 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttgaatgttgtgagtttgttcgcagattcatccttta 9528718  T
Q  101 c 101  Q
    |    
T  9528717 c 9528717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44947561 - 44947661
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  44947561 attccggtcactttaattttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcagattcatccttta 44947660  T
Q  101 c 101  Q
    |    
T  44947661 c 44947661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43153954 - 43153875
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| |||||||| |||||    
T  43153954 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctgttaacttggatgttgtgagttt 43153875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4644007 - 4644107
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||| || || || ||| ||||||| ||||    
T  4644007 attccggtcaatttaattttatcatatattattgtaggcattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatccttta 4644106  T
Q  101 c 101  Q
    |    
T  4644107 c 4644107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9645464 - 9645364
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  9645464 attccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 9645365  T
Q  101 c 101  Q
    |    
T  9645364 c 9645364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 38706646 - 38706550
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||||| |||| ||| ||||| || ||| |||||||||||||    
T  38706646 cggtcactttaattttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcttttac 38706550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51318134 - 51318234
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||| ||||| ||  || ||||||| ||||    
T  51318134 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcacagattcatccttta 51318233  T
Q  101 c 101  Q
    |    
T  51318234 c 51318234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 52097856 - 52097764
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||| ||||||||| |||||||| |||||||| ||| |||||    
T  52097856 attccggtcactttaattttatcatatatctttgtaggcattatgacgttatatggtattaacttggatgttgtgagtttattcgcatattca 52097764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 53616590 - 53616490
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  53616590 attccggtcactttaatttcattatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatccttta 53616491  T
Q  101 c 101  Q
    |    
T  53616490 c 53616490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27593769 - 27593690
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||| |||||    
T  27593769 attcctgtcactttaattttatcatatatttttgtaggaattatgccgttatatgctattaacttggatgttgtgagttt 27593690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 12265618 - 12265690
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||| |||||    
T  12265618 tcactttaattttatcatatatttttttaggcattatgccgttatatgctattaactttgatgttgtgagttt 12265690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34024378 - 34024278
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||||   || ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  34024378 attccggtcattttaattttatcatatatttttgtaagcattatgttgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 34024279  T
Q  101 c 101  Q
    |    
T  34024278 c 34024278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43444541 - 43444641
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||  ||| ||| ||||| || ||| ||||||| ||||    
T  43444541 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaatttgaatgctgtgagtttgttcgcagattcatccttta 43444640  T
Q  101 c 101  Q
    |    
T  43444641 c 43444641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45227981 - 45227881
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | || ||||| ||||||||| |||||||| ||||| || | | ||||||| ||||    
T  45227981 attccggtcactttaattttatcatatatttttgtgggcattatgcggttatatgttattaacttggatgttgtgagtttgttcgtagattcatccttta 45227882  T
Q  101 c 101  Q
    |    
T  45227881 c 45227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 49410372 - 49410472
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||| ||| ||||| || ||  ||||||| ||||    
T  49410372 attcctgtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgctgattcatccttta 49410471  T
Q  101 c 101  Q
    |    
T  49410472 c 49410472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 1532065 - 1532156
Alignment:
Q  9 cactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||||| || || || ||| ||||||| ||||    
T  1532065 cactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatccttta 1532156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10389694 - 10389615
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||| ||| |||||    
T  10389694 attccgatcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagttt 10389615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18138854 - 18138775
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||| |||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||||| |||||    
T  18138854 attccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagttt 18138775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 49126067 - 49125988
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||| |||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||||| |||||    
T  49126067 attccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagttt 49125988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 9284066 - 9284160
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | | |||||||| ||||| || | | |||||||||||||    
T  9284066 gtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattatcatggatgttgtgagtttgttcgtagattcatcttttac 9284160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 868311 - 868376
Alignment:
Q  1 attccggtcactttaattttatcatatattttt-gtaggcattataccgtcatatgctattaactt 65  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  868311 attccggtcactttaattttatcatatatttttggtaggcattatgccgttatatgctattaactt 868376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6972959 - 6973028
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||    
T  6972959 attccggtgactttaattttatcatatatttttgtaggtattatgccgttatatgctattaacttggatg 6973028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21090291 - 21090391
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||| || |||||||||||||||  ||| ||||| ||||||||| |||  ||| ||||| |||||| ||||||| ||||    
T  21090291 attccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgtttgcagattcatccttta 21090390  T
Q  101 c 101  Q
    |    
T  21090391 c 21090391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50766452 - 50766388
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||    
T  50766452 attccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaactt 50766388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 56199245 - 56199345
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| | |||||||||||||||||||||||||||| |||||| |||| | ||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  56199245 attccgatgactttaattttatcatatatttttgtagacattatgccgttacatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 56199344  T
Q  101 c 101  Q
    |    
T  56199345 c 56199345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2115528 - 2115429
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||| |||  ||| ||||| || ||| ||||||| ||||    
T  2115528 attccagtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatactgtgagtttgttcgcagattcatccttta 2115429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32952691 - 32952626
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactta 66  Q
    |||||||||| |||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||    
T  32952691 attccggtcaatttaattttatcttatatttttgtaggcattatgtcgttatatgctattaactta 32952626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 46991064 - 46990971
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||||||||||||||||||||||||||||  |||  |||||| |||||||  ||||||| ||||| || ||| ||||||| |||||    
T  46991064 tcactttaattttatcatatatttttgtaggcattatgtcgttctatgctgttaacttgaatgttgtgagtttgttcgcagattcatcatttac 46990971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1931691 - 1931627
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||    
T  1931691 attccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 1931627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3336104 - 3336004
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| ||| |||||||||||||||||| |||||||||||||  |||| |||||||| ||||||  ||||| | ||||| |||||| ||||||| ||||    
T  3336104 attccgatcattttaattttatcatatatatttgtaggcattacgccgttatatgctaataacttgaatgttttgagtttgtttgcagattcatccttta 3336005  T
Q  101 c 101  Q
    |    
T  3336004 c 3336004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 35261345 - 35261441
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||| ||||||||||||| |||| ||||||| |||||| |  | ||||||||||||||| |||||||| ||||| |||||| ||||||| |||||    
T  35261345 cggtcattttaattttatcagatatgtttgtagacattatgcacttatatgctattaacttggatgttgtgagtttgtttgcagattcatcctttac 35261441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 35964910 - 35964843
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    |||||||||||||||||||||||||||||||| |||||   || ||||||||||||||| ||||||||    
T  35964910 gtcactttaattttatcatatatttttgtaggaattatgttgttatatgctattaacttggatgttgt 35964843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 49680690 - 49680765
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||| ||||| |||||||||  ||||||| |||||    
T  49680690 cggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgttattaacttgaatgttgtgagttt 49680765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 47417818 - 47417875
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||    
T  47417818 tcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaactt 47417875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20569404 - 20569506
Alignment:
Q  1 attccggtcactttaattttatcatat--atttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttt 98  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||   || ||||||||||||||| |||  ||| ||||| || ||| ||||||| ||    
T  20569404 attccggtcactttaatttcatcatatatatttttgtaggcattatgttgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctt 20569503  T
Q  99 tac 101  Q
    |||    
T  20569504 tac 20569506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29965784 - 29965827
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  29965784 attccggtcactttaatttcatcatatatttttgtaggcattat 29965827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37188535 - 37188437
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |  | | ||||||||||||||| |||| ||| ||| | || ||| ||| |||||||    
T  37188535 attcctgtcactttaattttatcatataattttgtaggcattgtgtcattatatgctattaacttggatgctgtgagtgtgttcgcagatttatctttt 37188437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 7273743 - 7273711
Alignment:
Q  12 tttaattttatcatatatttttgtaggcattat 44  Q
    |||||||||||||||||||||||||||||||||    
T  7273743 tttaattttatcatatatttttgtaggcattat 7273711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 31381610 - 31381578
Alignment:
Q  3 tccggtcactttaattttatcatatatttttgt 35  Q
    |||||||||||||||||||||||||||||||||    
T  31381610 tccggtcactttaattttatcatatatttttgt 31381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 56040462 - 56040430
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaacaa 138  Q
    |||||||||||||||||||||||||||||||||    
T  56040462 tgaatgaatatcgttttgtttttgtaaaaacaa 56040430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14183951 - 14183993
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  14183951 attccggtcactttaattttatcaaat-tttttgtaggcattat 14183993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 2521072 - 2521101
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  2521072 tgaatgaatatcgttttgtttttgtaaaaa 2521101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 26633487 - 26633458
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  26633487 tgaatgaatatcgttttgtttttgtaaaaa 26633458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 56156464 - 56156435
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  56156464 tgaatgaatatcgttttgtttttgtaaaaa 56156435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 35964782 - 35964750
Alignment:
Q  103 atttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    |||||||||||||||||||||||||||| ||||    
T  35964782 atttgaatgaatatcgttttgtttttgtcaaaa 35964750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 47417945 - 47417977
Alignment:
Q  103 atttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||| |||||||||||||||||    
T  47417945 atttgaatgaatatcattttgtttttgtaaaaa 47417977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11709647 - 11709547
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| || ||| ||||||| ||||    
T  11709647 attccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctattaatttagatgttgtgagtttgttcgcagattcatccttta 11709548  T
Q  101 c 101  Q
    |    
T  11709547 c 11709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 45426002 - 45425906
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||| ||| ||||||| |||||    
T  45426002 cggtcactttaattttatcatatatttttgtaggcattataccgttatatgctattaacttggatgctgtgagtttattcgcagattcatcatttac 45425906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25406224 - 25406124
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||||||||    
T  25406224 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatctttta 25406125  T
Q  101 c 101  Q
    |    
T  25406124 c 25406124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38520475 - 38520375
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||  |||||||||| ||||    
T  38520475 attccagtcactttaattttatcgtatatttttgtaggcattataccgttatatgctattaacttggatgttgtgagtttgttcacaaattcatccttta 38520376  T
Q  101 c 101  Q
    |    
T  38520375 c 38520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 50272080 - 50271986
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| || ||| |||||||    
T  50272080 attccagtcactttaattttgtcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatc 50271986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30818291 - 30818218
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  30818291 attccggtcactttaattttatcatatatttttgtaggcattatagcgttatatgctattaacttggatgttgt 30818218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5701400 - 5701500
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  5701400 attccggtcactttaatttcatcatatatttgtgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 5701499  T
Q  101 c 101  Q
    |    
T  5701500 c 5701500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7997930 - 7998030
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||| |||| ||| ||||| |||||| ||||||| ||||    
T  7997930 attccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtttgcagattcatccttta 7998029  T
Q  101 c 101  Q
    |    
T  7998030 c 7998030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9687145 - 9687045
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  9687145 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatccttta 9687046  T
Q  101 c 101  Q
    |    
T  9687045 c 9687045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18569251 - 18569159
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| |||||||||||| || |||||||| |||||||| |||||||||    
T  18569251 attccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttattcgcaaattca 18569159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19715835 - 19715735
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || ||||||||||||||| |||| ||| |||||||| ||| ||||||| ||||    
T  19715835 attccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttattcgcagattcatccttta 19715736  T
Q  101 c 101  Q
    |    
T  19715735 c 19715735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50148511 - 50148612
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||  || ||| ||||||| ||||    
T  50148511 attccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttgtttcgcagattcatccttta 50148610  T
Q  101 ca 102  Q
    ||    
T  50148611 ca 50148612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40880953 - 40880853
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||||| ||||| || ||| || |||| ||||    
T  40880953 attctggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagatgcatcattta 40880854  T
Q  101 c 101  Q
    |    
T  40880853 c 40880853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50166039 - 50165939
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| ||  || ||||||| ||||    
T  50166039 attctggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatccttta 50165940  T
Q  101 c 101  Q
    |    
T  50165939 c 50165939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 51868585 - 51868485
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| | ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||| ||| ||||| || ||||||||||| ||||    
T  51868585 attccgatgactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgtgagtttgttcgcaaattcatccttta 51868486  T
Q  101 c 101  Q
    |    
T  51868485 c 51868485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51872004 - 51872104
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  51872004 attccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 51872103  T
Q  101 c 101  Q
    |    
T  51872104 c 51872104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28035280 - 28035359
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||| |||||||| |||||    
T  28035280 attccggtcactttaattttatcataaatttttgtaggcattatgccgttatatgttattaactttgatgttgtgagttt 28035359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 5324494 - 5324420
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtt 79  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||    
T  5324494 cggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtt 5324420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 19723458 - 19723554
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| |||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||| |||| ||| |||||||| ||| ||||||| |||||    
T  19723458 cggttactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgctgtgagtttattcgcagattcatcctttac 19723554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33291358 - 33291258
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || ||||||| ||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  33291358 attccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctgttaacttggatgctgtgagtttgttagcagattcatcattta 33291259  T
Q  101 c 101  Q
    |    
T  33291258 c 33291258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 3871553 - 3871628
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||    
T  3871553 cggtcactataattttaacatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagttt 3871628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 20266444 - 20266543
Alignment:
Q  2 ttccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| ||||||||||||| |||||||| |||||||| |||||| |||| |||||| |||||||| |||||||| |||||||| ||| ||||||| |||||    
T  20266444 ttccagtcactttaatttcatcatatacttttgtagacattatgccgttatatgcaattaacttggatgttgtgagtttattcgcagattcatcctttac 20266543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 7312042 - 7311949
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttt 98  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||||||| ||| || ||||||| || ||| ||| ||||||    
T  7312042 cggtcactttagttttatcatatatttttgtaggcattatgccgttatatactattaacttggatattataagtttgttcgcagatttatcttt 7311949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7342863 - 7342963
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||   || ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  7342863 attccggtgactttaattttatcatatatttttataggcattatgatgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 7342962  T
Q  101 c 101  Q
    |    
T  7342963 c 7342963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9172631 - 9172731
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||  || |||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  9172631 attccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatccttta 9172730  T
Q  101 c 101  Q
    |    
T  9172731 c 9172731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9180613 - 9180713
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||  || |||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  9180613 attccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatccttta 9180712  T
Q  101 c 101  Q
    |    
T  9180713 c 9180713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 39927488 - 39927396
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| || |||||||| ||||| || ||| ||||||| ||||    
T  39927488 tcactttaattttatcatatatttttgtaggcattatgccgttatatcttattaatttggatgttgtgagtttgttcgcatattcatccttta 39927396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11454076 - 11454178
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgt--catatgctattaacttagatgttgtaagtttatttgcaaattcatcttt 98  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || |   ||||||||||||||| |||||||| ||||| || ||| ||||||| ||    
T  11454076 attctggtcactttaattttatcatatatttatgtaggcattatgccattatatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 11454175  T
Q  99 tac 101  Q
    |||    
T  11454176 tac 11454178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 48217596 - 48217679
Alignment:
Q  19 ttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    ||||||||||||||||||||||||||   || ||||||||||||||| |||||||| ||||| || ||||||||||| ||||||    
T  48217596 ttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgttgtgagtttgttcgcaaattcatcctttaca 48217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14545658 - 14545724
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttag 67  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  14545658 attccgatcattttaattttatcatatatttttgtaggcattatgccgttatacgctattaacttag 14545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9919530 - 9919630
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||| ||| ||||    
T  9919530 attccggtgactttaatttgatcatatatttttgta-gcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatccttta 9919628  T
Q  101 ca 102  Q
    ||    
T  9919629 ca 9919630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 27872889 - 27872978
Alignment:
Q  12 tttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||  ||||||| ||||| || ||| ||||||| |||||    
T  27872889 tttaattttatcatatatttttgtaagcattatgccgttatatgttattaacttgaatgttgtgagtttgttcgcagattcatcatttac 27872978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 31130532 - 31130432
Alignment:
Q  2 ttccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||| || ||||||||||||||||||  ||| |||| |||||||||| |||| ||| ||||| ||  || ||||||| |||||    
T  31130532 ttccggtcactttaattttattatgtatttttgtaggcattatgtcgttatattctattaacttggatgctgtgagtttgttcacatattcatcctttac 31130433  T
Q  102 a 102  Q
    |    
T  31130432 a 31130432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32677070 - 32676975
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |     ||||||||| |||| ||| ||||| || ||| ||||||||||||    
T  32677070 attccagtcactttaattttatcatatatttttgtaggcattatgccgtta-----tattaacttggatgatgtgagtttgttcgcagattcatctttta 32676976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34519269 - 34519369
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||  | | || |||||||||||| |||  ||| ||||| || ||| ||||||| ||||    
T  34519269 attccggtcactttaattttatcatatatttttgtatgcattatgtcattatttgctattaacttggatcctgtgagtttgttcgcagattcatccttta 34519368  T
Q  101 c 101  Q
    |    
T  34519369 c 34519369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41081644 - 41081544
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| | || ||||| ||||||||  |||||||| ||||| ||  || |||||| |||||    
T  41081644 attctggtcattttaattttatcatatatttttgtaggcattatgcagttatatgttattaactcggatgttgtgagtttgttcacagattcatgtttta 41081545  T
Q  101 c 101  Q
    |    
T  41081544 c 41081544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45805768 - 45805669
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||| |||||  ||| ||||| ||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  45805768 attccggtgactttaattttatcatatatttttgtaggtattatgtcgttatatg-tattaacttggatgatgtgagtttgttcgcagattcatccttta 45805670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33817108 - 33817029
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | | ||||| ||||||||| |||| ||| |||||    
T  33817108 attccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttattaacttggatgatgtgagttt 33817029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33876578 - 33876499
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | | ||||| ||||||||| |||| ||| |||||    
T  33876578 attccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttattaacttggatgatgtgagttt 33876499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35584558 - 35584462
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || |||    |||||||| |||| ||| ||||| || ||||||||||| ||||    
T  35584558 attccggtcactttaatttcatcatatatttttgtaggcattatgctgttata----attaacttggatgctgtgagtttgttcgcaaattcatccttta 35584463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40646815 - 40646894
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||  ||| ||||||||||| ||| |||||||| |||||    
T  40646815 attctggtcactataatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagttt 40646894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39987529 - 39987592
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||||||||||||||||||||||||||| |||| |||||||||| | || |||||||||||||||    
T  39987529 attccggtcactttaattttatcatata-ttttataggcattatgctgttatatgctattaactt 39987592  T

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Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27915044 - 27914965
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |  ||| |||||||||||| || |||| ||| |||||    
T  27915044 attccggtcactttaatttcatcatatatttttgtaggtattttgtcgttatatgctattaatttggatgctgtgagttt 27914965  T

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Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 31836989 - 31837076
Alignment:
Q  15 aattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    ||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||  ||| ||||| || ||| ||| ||| ||||||    
T  31836989 aatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtgagtttgttcgcagatttatcctttaca 31837076  T

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Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30879216 - 30879309
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcat 94  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||   || |||| |||||||||  |||||||| ||||| || ||| ||||||    
T  30879216 attccgatcactttaatttcatcatatatttttgtagacattatgttgttatatactattaactatgatgttgtgagtttgttcgcagattcat 30879309  T

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Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48365706 - 48365627
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||| | ||||||||||||||||||||||||||||| |||||  ||| ||| | ||||||||| |||| ||| |||||    
T  48365706 attccgattactttaattttatcatatatttttgtaggaattatgtcgttataagttattaacttggatgctgtgagttt 48365627  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 19061071 - 19061140
Alignment:
Q  31 tttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||| | ||||  |||||||||||||| |||||||| ||||| || ||| ||||||||||||    
T  19061071 tttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatctttta 19061140  T

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Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 47133051 - 47133135
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| ||||||| |||||||||||||| | |||| ||||||||||||||| |||||||| ||||| || ||| ||| ||| |||||    
T  47133051 atttcatcatat-tttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttac 47133135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 32679085 - 32679007
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    |||| ||||||| |||||||||||||| | |||| |||||| |||||||| |||||||| ||||| || ||| |||||||    
T  32679085 atttcatcatat-tttttgtaggcattttgccgttatatgccattaacttggatgttgtgagtttgttcgcagattcatc 32679007  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 24597143 - 24597109
Alignment:
Q  101 caatttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    |||||||||||||||||||||| ||||||||||||    
T  24597143 caatttgaatgaatatcgttttatttttgtaaaaa 24597109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 3228548 - 3228577
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  3228548 tgaatgaatatcgttttgtttttgtaaaaa 3228577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 21687654 - 21687683
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  21687654 tgaatgaatatcgttttgtttttgtaaaaa 21687683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 27456667 - 27456716
Alignment:
Q  52 tatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||||| | |||||| ||||| || |||||||||||||||||    
T  27456667 tatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttac 27456716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 37720093 - 37720009
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||| | |||||||||||| | | ||   ||||||||||||| | |||||| ||||| |||||||||||| |||||||    
T  37720093 attttatcatat-tatttgtaggcatttttctgtggaatgctattaacttgggtgttgtgagtttgtttgcaaattcaccttttac 37720009  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 39888365 - 39888406
Alignment:
Q  52 tatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||||||||||||||| |||||||| ||| |||||    
T  39888365 tatgctattaacttagatgttgtgagtttattcgcagattca 39888406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43148866 - 43148967
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  43148866 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 43148965  T
Q  101 ca 102  Q
    ||    
T  43148966 ca 43148967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 781527 - 781621
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||||| ||| |||| ||| |||||||    
T  781527 attccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagtatattcgcagattcatc 781621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4954131 - 4954232
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| ||  || ||||||| ||||    
T  4954131 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacatattcatccttta 4954230  T
Q  101 ca 102  Q
    ||    
T  4954231 ca 4954232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 34881862 - 34881955
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| |||||| ||||||| ||||    
T  34881862 gtcactttaattatatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgcagattcatccttta 34881955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7247098 - 7247198
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  7247098 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 7247197  T
Q  101 c 101  Q
    |    
T  7247198 c 7247198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27752064 - 27752164
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||| ||| | || | | ||||||||||||    
T  27752064 attccggtcactttaattttatcatatatttttgtaggcattataccattatatgctattaacttggatgctgtgagtatgttcgtagattcatctttta 27752163  T
Q  101 c 101  Q
    |    
T  27752164 c 27752164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19259752 - 19259673
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| |||||    
T  19259752 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagttt 19259673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15571046 - 15571140
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||| || ||| |||||||    
T  15571046 attccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatc 15571140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18677405 - 18677311
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||  |||| || ||| |||||||    
T  18677405 attccggtcactttaattttatcatatatttttgtaagcattatgccgttatatgctattaacttggatgttgtgtgtttgttcgcagattcatc 18677311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27266799 - 27266699
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  27266799 attccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcattta 27266700  T
Q  101 c 101  Q
    |    
T  27266699 c 27266699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30298983 - 30299083
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| | ||| | || ||| ||||||| ||||    
T  30298983 attctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttctgagtatgttcgcagattcatccttta 30299082  T
Q  101 c 101  Q
    |    
T  30299083 c 30299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 7241932 - 7242023
Alignment:
Q  10 actttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| |||||    
T  7241932 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttac 7242023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28235731 - 28235827
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgt--catatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||||    
T  28235731 tcactttaattttatcatatatttttgtaggcattatgccgttatatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttaca 28235827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3271342 - 3271242
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| ||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||| |||||| | ||||| || ||| ||||||| ||||    
T  3271342 attccgatcactttaattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgcagattcatccttta 3271243  T
Q  101 c 101  Q
    |    
T  3271242 c 3271242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16981429 - 16981524
Alignment:
Q  1 attccggtcactttaattttatcatat--atttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcat 94  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||| || ||| ||||||    
T  16981429 attccggtgactttaattttatcatatatatttttgtaggcattatatcgttatatgctattaacttggatgttgtgagtttgttcgcagattcat 16981524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20257636 - 20257536
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||| |||| ||| ||||| ||  || ||||||| ||||    
T  20257636 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcattta 20257537  T
Q  101 c 101  Q
    |    
T  20257536 c 20257536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41184380 - 41184280
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||||||||||||||||||  |||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  41184380 attccagtcactttaattttatcatatatttttgccggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 41184281  T
Q  101 c 101  Q
    |    
T  41184280 c 41184280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2057778 - 2057699
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||  |||||||||||||||| |||||    
T  2057778 attccggtcactataattttatcatatatttttgtaggcattatgtcgttatatgcagttaacttagatgttgtgagttt 2057699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42886617 - 42886696
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||  ||||||| |||||    
T  42886617 attccggtcaatttaattttataatatatttttgtaggcattatgccgttatatgctattaacttgaatgttgtgagttt 42886696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10649783 - 10649856
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| |||||| || ||||||||    
T  10649783 attccggtcactttaattttatcatatgtttttgtaggcattatgccgttatatggtattaaattggatgttgt 10649856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 11768143 - 11768232
Alignment:
Q  6 ggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||| |||| ||| ||||| || ||| |||||||    
T  11768143 ggtcactttaattttatcatatatttttgtagccattatgccgttatatgctattatcttggatgatgtgagtttgttcgcagattcatc 11768232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21060223 - 21060150
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||| ||||| ||||||||    
T  21060223 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatattctatcaacttggatgttgt 21060150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 7612986 - 7612898
Alignment:
Q  13 ttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||||||||||  |||  ||||||||||| ||  ||||||| ||||| || |||||||||||||||||    
T  7612986 ttaattttatcatatatttttgtaggcattatgtcgttctatgctattaaattgaatgttgtgagtttgttcgcaaattcatcttttac 7612898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 26578395 - 26578455
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  26578395 cggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaactt 26578455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19280885 - 19280807
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||| |||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| |||||    
T  19280885 attccggtgactttaatattatcatatatttttgtaggcattat-gcgttatatgctattaacttggatgttgtgagttt 19280807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35475278 - 35475205
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||| ||||||||||||||| ||||||||    
T  35475278 attccagtcactttaattttatcatatatttttgtaggcataacgtcgttatatgctattaacttggatgttgt 35475205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 22978860 - 22978764
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||| ||||||| | |||||||||||| |||||| |||| |||||||||||  || |||| | |||||||||| ||||||||||| |||||    
T  22978860 cggtcactttcattttataaaatatttttgtagccattatgccgttatatgctattagtttggatgatttaagtttattcgcaaattcatcctttac 22978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30298346 - 30298421
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgt--catatgctattaacttagatgttgt 74  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||   ||||||||||||||| ||||||||    
T  30298346 attccggccactttaattttatcatatatttttgtaggcattatgctgttatatatgctattaacttggatgttgt 30298421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42580027 - 42580091
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||||||||||||||||||||||||||||||||| ||  ||||| |||| |||||||||||||||    
T  42580027 attccggtcactttaattttatcatatatttttgcagatattatgccgttatatgctattaactt 42580091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 7150271 - 7150196
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||| |||||||||||||||||||||||||||| |||||| |||| |||||||||||| || |||| ||| |||||    
T  7150271 cggtgactttaattttatcatatatttttgtagtcattatgccgttatatgctattaatttggatgctgtgagttt 7150196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 43008238 - 43008155
Alignment:
Q  18 tttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| | ||||| ||  |||||| ||| |||||    
T  43008238 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttatgagtttgttctcaaatttatcctttac 43008155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7886878 - 7886779
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||| || ||||||||||| |||||||||||||||| | || ||||||||||||||| |||  ||| ||||| ||  || ||||||||||||    
T  7886878 attccggtcactatagttttatcatat-tttttgtaggcattattctgttatatgctattaacttggatactgtgagtttgttcacagattcatctttta 7886780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43261759 - 43261716
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  43261759 attccggtcactttaatgttatcatatatttttgtaggcattat 43261716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41418662 - 41418605
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgcta 58  Q
    |||||| |||||||||||||||||||||||||||| | ||||||  ||| ||||||||    
T  41418662 attccgctcactttaattttatcatatatttttgtggacattatgtcgttatatgcta 41418605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 13468744 - 13468835
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||| | | |||||||||| |  ||||||||||||||||||| ||| |||| ||||| || | ||||||||| ||||    
T  13468744 tcactttagttttatcatat-tatgtgtaggcattttgtcgtcatatgctattaactttgattttgtgagtttgttcgtaaattcatcattta 13468835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 11976878 - 11976794
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    ||||||||||| | |||||||||||| | ||||  |||| ||||||||| |||||||| ||||| || ||| ||||||| ||||||    
T  11976878 ttttatcatat-tatttgtaggcattttcccgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttaca 11976794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 13422077 - 13422161
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||| | | |||||||||| | ||||  |||||||||||||| |||||||| ||||| || ||| ||||||| |||||    
T  13422077 attttatcatat-tatatgtaggcatttttccgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttac 13422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 25980302 - 25980377
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||| | |||||||||||| | |||| ||||||||||||||| | || ||| ||||| |||||| |||||    
T  25980302 ttttatcatat-tatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattca 25980377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 37483320 - 37483352
Alignment:
Q  103 atttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||| |||||||||||||||||    
T  37483320 atttgaatgaatatcattttgtttttgtaaaaa 37483352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 38597942 - 38598017
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||| | |||||||||||| | ||||  |||||||||||||| | |||||| ||||| || |||||||||    
T  38597942 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattca 38598017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5535 - 5635
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||  ||||||||| || ||||||||||| ||||    
T  5535 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatccttta 5634  T
Q  101 c 101  Q
    |    
T  5635 c 5635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9986282 - 9986182
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  9986282 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 9986183  T
Q  101 c 101  Q
    |    
T  9986182 c 9986182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8971568 - 8971467
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  8971568 attccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgcatattcatccttta 8971469  T
Q  101 ca 102  Q
    ||    
T  8971468 ca 8971467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4192978 - 4193046
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagat 69  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  4192978 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttagat 4193046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8806007 - 8806107
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||| |||||||| || || || ||| ||||||| ||||    
T  8806007 attccggtcactttaattttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatccttta 8806106  T
Q  101 c 101  Q
    |    
T  8806107 c 8806107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27249091 - 27248991
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  27249091 attccggtcactttaatttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 27248992  T
Q  101 c 101  Q
    |    
T  27248991 c 27248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32679050 - 32678952
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  32679050 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactt-gatgttgtgagtttgttcgcagattcatcattta 32678952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 27477293 - 27477390
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| ||| | || ||| ||||||| ||||||    
T  27477293 cggtcactttaattttatcatatatttttgtaggcattataccgttaaatactattaacttggatgttgtgagtatgttcgcagattcatcatttaca 27477390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 32913385 - 32913486
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttacaat 104  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||| ||| | || ||| ||||||| ||||| ||    
T  32913385 cggtcactttaattttatcatatatttttgtatgcattatgccgttatatgctattaacttggatgttgtgagtatgttcgcagattcatcctttacgat 32913484  T
Q  105 tt 106  Q
    ||    
T  32913485 tt 32913486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34600355 - 34600424
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  34600355 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatg 34600424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 84121 - 84021
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  84121 attccggccactttaattttatcatatattttcgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 84022  T
Q  101 c 101  Q
    |    
T  84021 c 84021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41431169 - 41431269
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| | ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||| |||||||| ||| ||| ||| ||||    
T  41431169 attccgatgactttaattttatcatatatttttgtaggcattatgccgttatatactattaacttggatgttgtgagtttattcgcagatttatccttta 41431268  T
Q  101 c 101  Q
    |    
T  41431269 c 41431269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 38575425 - 38575326
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||| ||| |||||||| ||||| || ||| ||||||| ||||    
T  38575425 attccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagtttgttcgcagattcatccttta 38575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2808412 - 2808334
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtt 79  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||    
T  2808412 attccgatcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtt 2808334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4228263 - 4228365
Alignment:
Q  1 attccggtcactttaatttt-atcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| |||    
T  4228263 attccgatcactttaatttttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 4228362  T
Q  100 aca 102  Q
    |||    
T  4228363 aca 4228365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7015651 - 7015558
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcat 94  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||    
T  7015651 attcccgtcgctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcat 7015558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21570348 - 21570256
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||  ||| ||||||||| || ||| |||||    
T  21570348 attccgttcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcagattca 21570256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33229080 - 33229006
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgta 75  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||    
T  33229080 attccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgta 33229006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3725321 - 3725421
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| ||||||||||||| ||||||||||||||||||||||  |||| |||||||||||  || |||| ||||||||| ||| || ||||||| ||||    
T  3725321 attccgatcactttaattttttcatatatttttgtaggcattacgccgttatatgctattagtttggatgatgtaagtttgtttacagattcatccttta 3725420  T
Q  101 c 101  Q
    |    
T  3725421 c 3725421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17319461 - 17319561
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||| | ||||||||||  ||| ||||| ||||||||| ||||| || ||||| || ||| ||||||| ||||    
T  17319461 attccggtcactttaattttatcatatatttgtataggcattatgtcgttatatgttattaacttggatgtcgtgagtttgttcgcagattcatccttta 17319560  T
Q  101 c 101  Q
    |    
T  17319561 c 17319561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40659872 - 40659772
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| || || ||||| ||||| |||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  40659872 attccggtcactttaatttcataatttatttctgtagccattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 40659773  T
Q  101 c 101  Q
    |    
T  40659772 c 40659772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41712729 - 41712628
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| | || ||||| |||||||||| || |||| ||||| || ||| ||| ||| ||||    
T  41712729 attccggtcattttaattttatcatatatttttgtaggtattatgcagttatatgttattaacttatatattgtgagtttgttcgcagatttatcattta 41712630  T
Q  101 ca 102  Q
    ||    
T  41712629 ca 41712628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20047022 - 20046922
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||| ||||  ||||||||| |||| ||| | ||| || ||| ||||||| ||||    
T  20047022 attccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatcttattaacttggatgctgtgattttgttcgcagattcatccttta 20046923  T
Q  101 c 101  Q
    |    
T  20046922 c 20046922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27949567 - 27949667
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||  |||  |||||||||||||| |||||||| ||||| || | | ||||||| ||||    
T  27949567 attccagtcactttaattttatcatatatttttatagacattatgacgttgtatgctattaacttggatgttgtgagtttgttcggagattcatcattta 27949666  T
Q  101 c 101  Q
    |    
T  27949667 c 27949667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6173773 - 6173832
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctatt 60  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  6173773 attccggtgactttaattttatcatatatttttgtaggcattatgcagttatatgctatt 6173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45128345 - 45128424
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||| |||||||||||||||||||||||||||| ||||||   || |||||||||||| || |||||||| |||||    
T  45128345 attccggtgactttaattttatcatatatttttgtagacattatgttgttatatgctattaatttggatgttgtgagttt 45128424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 459209 - 459144
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgtt 72  Q
    |||| |||||||||||||||||||||||||| |||||| || | ||||||||||||||| ||||||    
T  459209 gtcattttaattttatcatatatttttgtagacattatgccattatatgctattaactttgatgtt 459144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25087178 - 25087277
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||  |||| ||||||||||||||| |||| ||| ||||| ||  || ||||||| ||||    
T  25087178 attccagtcactttaatcttatcatatatttt-gtaggcattaagccgttatatgctattaacttggatgatgtgagtttgttcccagattcatccttta 25087276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36234149 - 36234192
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  36234149 attccggtcactttaatttcatcatatatttttgtaggcattat 36234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22421869 - 22421969
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||| ||||||||||||||||||||| || ||| |  | |||||| |||||||| |||| ||| ||||| ||  || ||||||| ||||    
T  22421869 attccggtcactttagttttatcatatatttttgtagacactatgctattatatgcaattaacttggatgctgtgagtttgttcacagattcatccttta 22421968  T
Q  101 c 101  Q
    |    
T  22421969 c 22421969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40625997 - 40625897
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||    | |||||||||||||||  ||||| | ||||| || ||| ||||||| ||||    
T  40625997 attccggtcactttaattttatgttatgtttttgtaggcattatctttttatatgctattaacttgaatgttatgagtttgttcgcagattcatcattta 40625898  T
Q  101 c 101  Q
    |    
T  40625897 c 40625897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 31580566 - 31580495
Alignment:
Q  30 ttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| |||||    
T  31580566 ttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcatttac 31580495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 30399974 - 30399889
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    |||||||||||| | |||||||||||| | ||||| ||||  |||||||||| |||||||||||| || ||| ||||||| ||||||    
T  30399974 attttatcatat-tatttgtaggcattttgccgtcgtatgtcattaacttaggtgttgtaagtttgttcgcagattcatcctttaca 30399889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 37614059 - 37613997
Alignment:
Q  8 tcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    ||||||||||||||||||||||||||||| |||||||   || ||||| ||||||||| ||||    
T  37614059 tcactttaattttatcatatatttttgtatgcattatgttgttatatgttattaacttggatg 37613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 37994439 - 37994528
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttacaattt 106  Q
    |||||||||||| | |||||||||||| | | || ||||||||||||||| | |||||| ||||| || ||| ||||||||||||| ||||    
T  37994439 attttatcatat-tatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacgattt 37994528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 9374499 - 9374450
Alignment:
Q  9 cactttaattttatcatatatttttgtaggcattataccgtcatatgcta 58  Q
    ||||||||||||||||| ||||||||||||||||||  ||| ||||||||    
T  9374499 cactttaattttatcatgtatttttgtaggcattatgtcgttatatgcta 9374450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 135
Target Start/End: Original strand, 17319590 - 17319621
Alignment:
Q  104 tttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||||    
T  17319590 tttgaatgaatatcgttttgtttttgtaaaaa 17319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 3268749 - 3268684
Alignment:
Q  27 tatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattc 92  Q
    |||||||||||||||||| || | ||||| ||||||||| |||| ||| ||||| |||||| ||||    
T  3268749 tatttttgtaggcattatgcctttatatggtattaacttggatgctgtgagtttgtttgcagattc 3268684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 4903962 - 4903933
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  4903962 tgaatgaatatcgttttgtttttgtaaaaa 4903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 31193153 - 31193124
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  31193153 tgaatgaatatcgttttgtttttgtaaaaa 31193124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 32190854 - 32190895
Alignment:
Q  52 tatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||||||| ||||||| |||||||||||| |||||    
T  32190854 tatgctattaacttaaatgttgtgagtttatttgcagattca 32190895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 38445449 - 38445478
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  38445449 tgaatgaatatcgttttgtttttgtaaaaa 38445478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 7646634 - 7646717
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||| | |||||||||||| | ||||  |||||||||||||| | |||||| ||||| || ||| ||||| |||||||    
T  7646634 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttac 7646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 17994537 - 17994505
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaacaa 138  Q
    ||||||| |||||||||||||||||||||||||    
T  17994537 tgaatgattatcgttttgtttttgtaaaaacaa 17994505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 30420855 - 30420911
Alignment:
Q  46 ccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||||    
T  30420855 ccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttaca 30420911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 37876562 - 37876503
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||| |||| ||||||||||||| | |||||||||||| | ||||| ||||||||||||||    
T  37876562 cggtgacttaaattttatcatat-tatttgtaggcattttgccgtcgtatgctattaactt 37876503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25631466 - 25631365
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  25631466 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgcagattcatccttta 25631367  T
Q  101 ca 102  Q
    ||    
T  25631366 ca 25631365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25162570 - 25162670
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||| || ||  ||||||| ||||    
T  25162570 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatccttta 25162669  T
Q  101 c 101  Q
    |    
T  25162670 c 25162670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39917338 - 39917238
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||| |||||||| ||||||||  || ||||||| ||||    
T  39917338 attccagtcactttaattttatcatatatttttgtaggcattatgcctttatatgctattaacttggatgttgtgagtttattcacagattcatccttta 39917239  T
Q  101 c 101  Q
    |    
T  39917238 c 39917238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49552164 - 49552064
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||| || ||| ||||||| ||||    
T  49552164 attccggtgactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgcagattcatccttta 49552065  T
Q  101 c 101  Q
    |    
T  49552064 c 49552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29503595 - 29503696
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||  ||| ||| | || ||| ||||||| ||||    
T  29503595 attccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggattctgtgagtatgttcgcatattcatccttta 29503694  T
Q  101 ca 102  Q
    ||    
T  29503695 ca 29503696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36906256 - 36906356
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  36906256 attccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatccttta 36906355  T
Q  101 c 101  Q
    |    
T  36906356 c 36906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38854976 - 38854876
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  38854976 attccgggcactttaattttatcatatatttttgtagtcattataccgttatatgttattaacttggatgatgtgagttttttcgcatattcatccttta 38854877  T
Q  101 c 101  Q
    |    
T  38854876 c 38854876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44907339 - 44907239
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||| || |||||||| ||||| || ||| ||||||| ||||    
T  44907339 attccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgcagattcatccttta 44907240  T
Q  101 c 101  Q
    |    
T  44907239 c 44907239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 12116238 - 12116311
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||    
T  12116238 gtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagttt 12116311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3848859 - 3848759
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||  ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  3848859 attccggtgactttaattttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 3848760  T
Q  101 c 101  Q
    |    
T  3848759 c 3848759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22803164 - 22803264
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| ||  |||||| ||| ||||    
T  22803164 attccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaatttatccttta 22803263  T
Q  101 c 101  Q
    |    
T  22803264 c 22803264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32607603 - 32607703
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| |||||||||||| |||||||||||||||||||||||| || | ||||||||||||| | |||||||| ||||| || ||| ||||||| ||||    
T  32607603 attccgatcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgcagattcatccttta 32607702  T
Q  101 c 101  Q
    |    
T  32607703 c 32607703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17237939 - 17238018
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||| ||| |||||    
T  17237939 attccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagttt 17238018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4178699 - 4178768
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | || ||||||||||||||| ||||    
T  4178699 attccggtcactttaattttatcatatatttttctaggcattatgctgttatatgctattaacttggatg 4178768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42719651 - 42719748
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||  ||  ||||||||| || | | ||||||||||    
T  42719651 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgccattaacttgaatactgtaagtttgttcgtagattcatcttt 42719748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 21488233 - 21488321
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||  ||  ||| |||||||| ||| |||||||    
T  21488233 gtcactttaattttatcatatatttttgtaggcattatactcttatatgctattaacttgaatactgtgagtttattcgcagattcatc 21488321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46178702 - 46178802
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||||||| |||| ||| ||||| || |||  || ||||||||    
T  46178702 attccggtcacttttattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagttttatctttta 46178801  T
Q  101 c 101  Q
    |    
T  46178802 c 46178802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 30648655 - 30648560
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| |||||||||||||||||||||||| |||||| |||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  30648655 cggtaactttaattttatcatatatttttataggcaatatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 30648560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46934776 - 46934873
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||     ||| ||||||||||||||| |||||||| ||||| || | | ||||||| ||||    
T  46934776 attccggtcactttaattttatcatatatttttgtaggcatgt---cgttatatgctattaacttggatgttgtgagtttgttcgtagattcatccttta 46934872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 14464645 - 14464738
Alignment:
Q  2 ttccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatc 95  Q
    |||| |||||||||||||| ||||||||||||||||||||||| | || |||| |||||||||| |||||| | ||||| || ||| |||||||    
T  14464645 ttccagtcactttaattttgtcatatatttttgtaggcattatgctgttatatactattaacttggatgttctgagtttgttcgcagattcatc 14464738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35499138 - 35499040
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| |||||||||||| |||||||||||||||  |||||||  ||| |||||||||||| || |||||||||||||| || ||| ||||||| ||||    
T  35499138 attccgatcactttaatttcatcatatatttttgt--gcattatgtcgttatatgctattaatttggatgttgtaagttttttcgcagattcatccttta 35499041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50611358 - 50611289
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||| ||||    
T  50611358 attcgggtcacttaaattttatcatatgtttttgtaggcattatacagttatatgctattaacttggatg 50611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 36734629 - 36734569
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||| |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  36734629 cggttactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactt 36734569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2342597 - 2342640
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2342597 attccggtcactttaattttatcatatatttttgtaggcattat 2342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 51202191 - 51202151
Alignment:
Q  4 ccggtcactttaattttatcatatatttttgtaggcattat 44  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51202191 ccggtcactttaattttatcatatatttttgtaggcattat 51202151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 21916611 - 21916708
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    |||||||||||||||||||||||||||||||||  ||||| ||    |||||||||||||| |||| ||| ||||| ||  || ||||||| ||||||    
T  21916611 cggtcactttaattttatcatatatttttgtagatattatgcccctgtatgctattaacttggatgatgtgagtttgttctcagattcatcctttaca 21916708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 37169374 - 37169427
Alignment:
Q  12 tttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||||||| |||||||||||||||||||||||| | || |||||||||||||||    
T  37169374 tttaatttgatcatatatttttgtaggcattatgctgttatatgctattaactt 37169427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 50194267 - 50194195
Alignment:
Q  29 tttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||||| | |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| |||||    
T  50194267 tttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 50194195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25849943 - 25850038
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatct 96  Q
    ||||| |||||||||| |||||  |||||||||||| |||||||  ||| |||| |||||||||| | |||||| ||||| || ||| ||||||||    
T  25849943 attccagtcactttaactttattgtatatttttgtaagcattatgtcgttatatactattaacttgggtgttgtgagtttgttcgcatattcatct 25850038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 51629037 - 51628988
Alignment:
Q  52 tatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||| ||| ||| | ||||||||||||||||||||||||    
T  51629037 tatgctattaacttaaatgatgtgaatttatttgcaaattcatcttttac 51628988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 38859954 - 38859922
Alignment:
Q  103 atttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    |||||||||||||||||||||||||||||||||    
T  38859954 atttgaatgaatatcgttttgtttttgtaaaaa 38859922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 4711627 - 4711709
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||| | |||||||||||| | ||||  |||||||||||||| | |||||| ||||| |||||| ||||||| ||||    
T  4711627 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatccttta 4711709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 6903105 - 6903155
Alignment:
Q  52 tatgctattaacttagatgttgtaagtttatttgcaaattcatcttttaca 102  Q
    |||||||||||||||||| |||| ||||| |||| ||||||||| ||||||    
T  6903105 tatgctattaacttagatattgtgagtttgtttgtaaattcatcctttaca 6903155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 43017046 - 43017116
Alignment:
Q  31 tttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||| | ||||  |||||||||||||||| |||||| ||||||||  || ||||||| |||||    
T  43017046 tttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttac 43017116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 953361 - 953332
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  953361 tgaatgaatatcgttttgtttttgtaaaaa 953332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 19339447 - 19339476
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  19339447 tgaatgaatatcgttttgtttttgtaaaaa 19339476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 23799764 - 23799735
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  23799764 tgaatgaatatcgttttgtttttgtaaaaa 23799735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 27856309 - 27856393
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||||||||||| | |||||||||||| | ||||   ||||||||||||| |||| ||| ||||| || ||| |||||||||||||    
T  27856309 attttatcatat-tatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatcttttac 27856393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 30293397 - 30293348
Alignment:
Q  51 atatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||| |||||  | |||||||||||| ||||||||||||    
T  30293397 atatgctattaacttggatgtcatgagtttatttgcagattcatctttta 30293348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31794204 - 31794272
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    |||||||||| ||||||||||||||||| | ||||||||| ||   ||| ||||||||||||||| ||||    
T  31794204 attccggtcagtttaattttatcatatactgttgtaggca-tacgtcgttatatgctattaacttggatg 31794272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 40487597 - 40487626
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  40487597 tgaatgaatatcgttttgtttttgtaaaaa 40487626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 46304337 - 46304308
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  46304337 tgaatgaatatcgttttgtttttgtaaaaa 46304308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 40487470 - 40487545
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||| | |||||||||||| | |||| ||||| ||||||||| | |||||| ||||| || |||||||||    
T  40487470 ttttatcatat-tatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttcgcaaattca 40487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 44959916 - 44959841
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||| | |||||||||||| | || |  |||||||||||||| |||| ||| |||||||||||| |||||    
T  44959916 ttttatcatat-tatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattca 44959841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 433631 - 433531
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  433631 attccggtgactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 433532  T
Q  101 c 101  Q
    |    
T  433531 c 433531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32684805 - 32684905
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||| || | | ||||||| ||||    
T  32684805 attccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgtagattcatccttta 32684904  T
Q  101 c 101  Q
    |    
T  32684905 c 32684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17222940 - 17222841
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||| ||||| || ||| ||||||| ||||    
T  17222940 attctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctagtaacttggatgttgtgagtttgttcgcagattcatccttta 17222841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35261434 - 35261533
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||| |||| ||||| || ||| ||||||| ||||    
T  35261434 attccggtcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatccttta 35261533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1448770 - 1448697
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  1448770 attccgatcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgt 1448697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13592449 - 13592348
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  13592449 attctggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttcgatgctgtgagtttgttcgcagattcatccttta 13592350  T
Q  101 ca 102  Q
    ||    
T  13592349 ca 13592348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22927810 - 22927709
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| | || ||| ||||| || ||||||||||| ||||    
T  22927810 attccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatcaacttggttgctgtgagtttgttcgcaaattcatccttta 22927711  T
Q  101 ca 102  Q
    ||    
T  22927710 ca 22927709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42311417 - 42311515
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||| ||  ||||| || ||||||||||| ||||    
T  42311417 attccggtcactttaattttatcatatatttttgtacgcattatgccgttatatgctattaacttggatgctg--agtttgttcgcaaattcatccttta 42311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26492502 - 26492602
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||| |||| ||| ||||| ||  || ||||||||||||    
T  26492502 attccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcacagattcatctttta 26492601  T
Q  101 c 101  Q
    |    
T  26492602 c 26492602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46822152 - 46822252
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||| |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| || ||| ||||||| ||||    
T  46822152 attccgatcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttta 46822251  T
Q  101 c 101  Q
    |    
T  46822252 c 46822252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20083475 - 20083576
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||| ||| ||||||||||| |||||| | ||||| || ||| ||||||| ||||    
T  20083475 attccggtcactttagttttatcatatatttttgtaggcattatgtcgttatacgctattaactttgatgttattagtttgttcgcagattcatcattta 20083574  T
Q  101 ca 102  Q
    ||    
T  20083575 ca 20083576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26583846 - 26583947
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttag-atgttgtaagtttatttgcaaattcatctttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||| ||| || ||||| ||| ||||||| |||    
T  26583846 attccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactttgaatgctgtgagcttattcgcagattcatccttt 26583945  T
Q  100 ac 101  Q
    ||    
T  26583946 ac 26583947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 31235724 - 31235631
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcat 94  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| ||  |||||||||    
T  31235724 attccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaattcat 31235631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 32521861 - 32521764
Alignment:
Q  9 cactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttacaattt 106  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||| ||||| ||  |||||||||| ||||| ||||    
T  32521861 cacttttattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgttgtgagtttgttcacaaattcatcctttacgattt 32521764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 48208037 - 48208138
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgcta-ttaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||| ||||||| |||||||| ||| | || ||| ||||||| |||    
T  48208037 attccggtcactttaattttatcatatatttttgttggcattatgccgttatatgctatttaacttggatgttgtgagtattttcgcagattcatccttt 48208136  T
Q  100 ac 101  Q
    ||    
T  48208137 ac 48208138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2843181 - 2843081
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||| |||||||| ||| ||||| ||  || ||||||| ||||    
T  2843181 attccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattagcttagatgctgtgagtttgttcacatattcatccttta 2843082  T
Q  101 c 101  Q
    |    
T  2843081 c 2843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7640715 - 7640615
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||  ||| ||||||||||||||| |||||||| ||||| || ||| ||||||| ||||    
T  7640715 attctggtcactttaatttcatcatatatttttataggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcattta 7640616  T
Q  101 c 101  Q
    |    
T  7640615 c 7640615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20116719 - 20116818
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||| ||  || ||||||| ||||    
T  20116719 attccggtcactttaattttatcaaatatttttgtaggcattatgtcgt-atatgctattaacttggatgttgtgagtttgttcacagattcatcattta 20116817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34773848 - 34773948
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||| |||| ||| ||||| |||||| ||| ||| ||||    
T  34773848 attccagtcactttaatttcatcatatatttttgtaggcattatatcgttatatactattaacttggatgctgtgagtttgtttgcagatttatccttta 34773947  T
Q  101 c 101  Q
    |    
T  34773948 c 34773948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 35496111 - 35496036
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| |||||    
T  35496111 cggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagttt 35496036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19560135 - 19560199
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||||    
T  19560135 attccggtcactttaattttatcatatatttttgtacacattatgccgttatatgctattaactt 19560199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 21266531 - 21266627
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| ||||| ||  || ||||||| |||||    
T  21266531 cggtgactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacagattcatcatttac 21266627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23085658 - 23085758
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||| |||||||||||| || |||  ||| ||||| || ||| ||||||| ||||    
T  23085658 attccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaatttggatactgtgagtttgttcgcagattcatccttta 23085757  T
Q  101 c 101  Q
    |    
T  23085758 c 23085758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23786712 - 23786812
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||   || ||||||||| |||||||||| ||| ||||| || ||| ||||||| ||||    
T  23786712 attcctgtcactttaattttatcatatatttttgtatgcattatgttgttatatgctatcaacttagatgctgtgagtttgttcgcagattcatcattta 23786811  T
Q  101 c 101  Q
    |    
T  23786812 c 23786812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35667172 - 35667072
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||   || ||||| ||||||||| ||||| || ||||| ||  |||||||||| ||||    
T  35667172 attccggtcactttaattttatcatatatttttgtatgcattatgttgttatatgatattaacttggatgtcgtgagtttgttcacaaattcatcattta 35667073  T
Q  101 c 101  Q
    |    
T  35667072 c 35667072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45198973 - 45198873
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||||  ||| |||| |||||||||| |||||||| ||| | || ||| ||||||| ||||    
T  45198973 attccggtcactttgattttatcatatatttttgtaggtattatgtcgttatatactattaacttggatgttgtgagtatgttcgcagattcatccttta 45198874  T
Q  101 c 101  Q
    |    
T  45198873 c 45198873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1485197 - 1485096
Alignment:
Q  1 attccggtcactttaattttat-catatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    |||||||| ||||||||||| | |||||||||||||||||||||| || | ||||||||||||||| ||||||||||  || || ||| ||||||| |||    
T  1485197 attccggtgactttaatttttttcatatatttttgtaggcattatgcccttatatgctattaacttggatgttgtaaacttgttcgcagattcatccttt 1485098  T
Q  100 ac 101  Q
    ||    
T  1485097 ac 1485096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6559014 - 6559083
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    |||||||||||||||||||||||||||||||||| | |||||||  ||| ||||||||||||||| ||||    
T  6559014 attccggtcactttaattttatcatatatttttgcaagcattatgtcgttatatgctattaacttggatg 6559083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17499621 - 17499548
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||| | ||||||    
T  17499621 attccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgt 17499548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17553593 - 17553666
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||| | ||||||    
T  17553593 attccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgt 17553666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42067002 - 42066929
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    ||||||||||||||||||||||||||||||||||||||||| |  |||  || |||||||||||| ||||||||    
T  42067002 attccggtcactttaattttatcatatatttttgtaggcataacgccgatatgtgctattaacttggatgttgt 42066929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46818359 - 46818279
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgta-ggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||  ||| ||||||||||||||| |||||||| |||||    
T  46818359 attccgttcactttaattttatcatatatttttgtacgacattatgtcgttatatgctattaacttggatgttgtgagttt 46818279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6002166 - 6002246
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatt 83  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || |  |||||||||||||| |||| ||| ||||||||    
T  6002166 attccggtcaccttaattttatcatgtatttttgtaggcattatgccat--tatgctattaacttggatgatgtgagtttatt 6002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 23425307 - 23425244
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatg 70  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  23425307 gtcactttacttttatcatatatttttgtaggcattatgccgttatatgttattaacttggatg 23425244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46339191 - 46339291
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttta 100  Q
    ||||||||||||||||||| |||||||||||||| | |||||||  ||| ||||| ||||||||| |||| ||| ||||| ||  || ||||||| ||||    
T  46339191 attccggtcactttaatttcatcatatatttttgcatgcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatccttta 46339290  T
Q  101 c 101  Q
    |    
T  46339291 c 46339291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14627819 - 14627777
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcatta 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  14627819 attccagtcactttaattttatcatatatttttgtaggcatta 14627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 17611250 - 17611303
Alignment:
Q  5 cggtcactttaattttatcatatatttttgtaggcattataccgtcatatgcta 58  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  ||||||||    
T  17611250 cggtcattttaattttatcatatatttttgtaggcattatatcgctatatgcta 17611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 38798928 - 38799004
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    |||||||||||| | |||||||||||| | ||||| |||||||||||||| |||||||| ||||| || ||| |||||    
T  38798928 attttatcatat-tatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttcgcagattca 38799004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 46244069 - 46244038
Alignment:
Q  104 tttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||||    
T  46244069 tttgaatgaatatcgttttgtttttgtaaaaa 46244038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 27341691 - 27341760
Alignment:
Q  10 actttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||| |||||||| |||| | |||||||||||| | |||| ||||||||||||||| |||||| |||||||    
T  27341691 acttaaattttataatat-tatttgtaggcattttgccgttatatgctattaactttgatgttataagttt 27341760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 42978876 - 42978910
Alignment:
Q  101 caatttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    |||||||||||||||||||||||||||||| ||||    
T  42978876 caatttgaatgaatatcgttttgtttttgtcaaaa 42978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 42979049 - 42979083
Alignment:
Q  101 caatttgaatgaatatcgttttgtttttgtaaaaa 135  Q
    |||||||||||||||||||||||||||||| ||||    
T  42979049 caatttgaatgaatatcgttttgtttttgtcaaaa 42979083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 43369707 - 43369614
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    ||||||||||||||||||||| | ||| |||||||| | ||||  |||| |||||||||  ||| ||||||||| ||| |||||| ||| |||||    
T  43369707 gtcactttaattttatcatat-tatttataggcattttgccgttgtatgatattaacttgtatgatgtaagtttgtttacaaatttatcctttac 43369614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 4999834 - 4999805
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  4999834 tgaatgaatatcgttttgtttttgtaaaaa 4999805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 5348522 - 5348473
Alignment:
Q  31 tttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||| ||||||  |||||||||||||| |||||||| |||||    
T  5348522 tttgtaggcattttaccgttgtatgctattaacttggatgttgttagttt 5348473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 12141123 - 12141094
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  12141123 tgaatgaatatcgttttgtttttgtaaaaa 12141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 46821557 - 46821528
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  46821557 tgaatgaatatcgttttgtttttgtaaaaa 46821528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 48061697 - 48061726
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  48061697 tgaatgaatatcgttttgtttttgtaaaaa 48061726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8828 - 8892
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaactt 65  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  8828 attctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactt 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16260 - 16181
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||| ||| |||||    
T  16260 attccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagttt 16181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 83377 - 83276
Alignment:
Q  2 ttccggtcactttaattttatcatatatttttgtaggc--attataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatctttt 99  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||| |||| ||||||||||||||| |||||||| ||||| || ||| ||||||| |||    
T  83377 ttccggtcactttaattttaccatacatttttgtaggcatattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcattt 83278  T
Q  100 ac 101  Q
    ||    
T  83277 ac 83276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 6444 - 6521
Alignment:
Q  3 tccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagttt 80  Q
    ||||||||||||| |||||||||||||||||||| |||||||  ||| ||||||||||||||| |||||||| |||||    
T  6444 tccggtcactttagttttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagttt 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 201313 - 201252
Alignment:
Q  1 attccggtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  201313 attccggtcactttaattttatcatatatttttgtaggcatcatgccgttatatgctattaa 201252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 361733 - 361666
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgt 74  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||| | ||||||| ||||||||    
T  361733 gtcactttaattttctcatatatttttgtaggcattatgccgttatatgttgttaacttggatgttgt 361666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 1490 - 1565
Alignment:
Q  17 ttttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattca 93  Q
    ||||||||||| | |||||||||||| | ||||  |||||||||||||| |||||||| ||||| |||||| |||||    
T  1490 ttttatcatat-tatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattca 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 454056 - 454094
Alignment:
Q  7 gtcactttaattttatcatatatttttgtaggcattata 45  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  454056 gtcactttaattttattatatatttttgtaagcattata 454094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 38333 - 38362
Alignment:
Q  106 tgaatgaatatcgttttgtttttgtaaaaa 135  Q
    ||||||||||||||||||||||||||||||    
T  38333 tgaatgaatatcgttttgtttttgtaaaaa 38362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 58032 - 57948
Alignment:
Q  16 attttatcatatatttttgtaggcattataccgtcatatgctattaacttagatgttgtaagtttatttgcaaattcatcttttac 101  Q
    |||| ||||||| |||||||||||||| | |||| ||||||||||||||| |||| ||| ||||| || ||| ||| ||| |||||    
T  58032 atttcatcatat-tttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttac 57948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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