View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19793_high_15 (Length: 295)
Name: NF19793_high_15
Description: NF19793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19793_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 30708171 - 30708423
Alignment:
| Q |
30 |
gtccctccatttattccttcctagatgaatcatagtagatgaacataatcaggaaaaccatccagaaaataaaatgagaaataatgaactgaaagccaaa |
129 |
Q |
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| T |
30708171 |
gtccctccatttattccttcctagatgaatcatagtagatgaacataatcaggaaaaccatccagaaaataaaatgagaaataatgaactgaaagccaaa |
30708270 |
T |
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| Q |
130 |
ccctataaacagga---tttggtgaatacctttatgctgtgtaaacgaagacaataaaaatgatgtttttatttgagttaatccttatgctgggctgaaa |
226 |
Q |
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| T |
30708271 |
ccctataaacaggaggatttggtgaatacctttgtgctgtgtaaacgaagacaataaaaatgatatttttattttagttaatccttatgctgggatgaaa |
30708370 |
T |
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| Q |
227 |
tccatttacattgaattttccatcaacagaaatagtttttccaatgatgtggg |
279 |
Q |
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| T |
30708371 |
tccatttacattgaattttccatcaacagaaatagtttgtccaatgatgtggg |
30708423 |
T |
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