View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19793_low_28 (Length: 270)

Name: NF19793_low_28
Description: NF19793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19793_low_28
NF19793_low_28
[»] chr4 (77 HSPs)
chr4 (1-270)||(51015042-51015316)
chr4 (2-268)||(37089635-37089910)
chr4 (2-270)||(22802998-22803270)
chr4 (1-268)||(24888594-24888866)
chr4 (1-270)||(36919848-36920123)
chr4 (1-270)||(9174409-9174682)
chr4 (101-270)||(9176864-9177033)
chr4 (1-270)||(5637728-5638004)
chr4 (1-270)||(36921757-36922031)
chr4 (2-270)||(48486115-48486388)
chr4 (127-270)||(16932215-16932358)
chr4 (1-270)||(22044653-22044928)
chr4 (1-270)||(11006500-11006779)
chr4 (1-270)||(31849862-31850136)
chr4 (1-270)||(40091678-40091952)
chr4 (40-270)||(3824875-3825110)
chr4 (127-270)||(16934569-16934712)
chr4 (127-270)||(22783172-22783315)
chr4 (34-270)||(38408995-38409236)
chr4 (127-270)||(22780807-22780950)
chr4 (1-186)||(5198300-5198490)
chr4 (1-270)||(11434771-11435025)
chr4 (155-270)||(7941135-7941251)
chr4 (1-168)||(24878887-24879059)
chr4 (1-185)||(22046948-22047135)
chr4 (5-168)||(619714-619882)
chr4 (1-167)||(52942709-52942881)
chr4 (1-150)||(47274643-47274797)
chr4 (2-146)||(22801126-22801274)
chr4 (1-164)||(24880353-24880521)
chr4 (1-186)||(9148140-9148323)
chr4 (101-270)||(18846925-18847096)
chr4 (101-186)||(11008960-11009045)
chr4 (2-162)||(8756513-8756679)
chr4 (1-122)||(7941263-7941391)
chr4 (1-75)||(36378288-36378362)
chr4 (1-75)||(14633316-14633389)
chr4 (1-73)||(3937472-3937543)
chr4 (1-76)||(53405122-53405200)
chr4 (1-75)||(6764835-6764909)
chr4 (155-249)||(22801262-22801356)
chr4 (2-72)||(56030443-56030513)
chr4 (1-76)||(17662497-17662576)
chr4 (1-73)||(24446842-24446914)
chr4 (2-76)||(14787695-14787771)
chr4 (2-77)||(15032800-15032875)
chr4 (1-73)||(18409610-18409681)
chr4 (2-73)||(19095880-19095951)
chr4 (190-270)||(22048493-22048573)
chr4 (1-72)||(33415750-33415821)
chr4 (1-76)||(44600101-44600176)
chr4 (1-75)||(40637070-40637144)
chr4 (224-270)||(8528920-8528966)
chr4 (1-74)||(16934406-16934479)
chr4 (1-86)||(18847138-18847223)
chr4 (1-85)||(9176737-9176821)
chr4 (1-73)||(38270249-38270321)
chr4 (1-73)||(38928441-38928513)
chr4 (1-75)||(8631682-8631760)
chr4 (1-72)||(37313329-37313400)
chr4 (2-76)||(5100992-5101066)
chr4 (132-179)||(16689333-16689380)
chr4 (1-32)||(22132653-22132684)
chr4 (1-32)||(22134878-22134909)
chr4 (1-75)||(47868397-47868471)
chr4 (205-267)||(52942940-52943002)
chr4 (1-74)||(16932052-16932125)
chr4 (1-73)||(18537733-18537806)
chr4 (3-88)||(40999212-40999297)
chr4 (1-66)||(41997497-41997562)
chr4 (1-75)||(2485135-2485210)
chr4 (205-270)||(4884533-4884598)
chr4 (225-270)||(6764656-6764701)
chr4 (2-66)||(19322702-19322766)
chr4 (1-76)||(24348209-24348288)
chr4 (225-270)||(47868197-47868242)
chr4 (224-268)||(8631914-8631958)
[»] chr1 (68 HSPs)
chr1 (1-270)||(20302200-20302475)
chr1 (1-270)||(13761579-13761853)
chr1 (1-270)||(51749780-51750055)
chr1 (1-270)||(51752106-51752381)
chr1 (1-266)||(28840424-28840696)
chr1 (1-266)||(28842239-28842511)
chr1 (1-252)||(6823643-6823901)
chr1 (2-270)||(10400094-10400367)
chr1 (127-268)||(16225891-16226032)
chr1 (132-270)||(47179430-47179568)
chr1 (1-270)||(15823288-15823562)
chr1 (127-270)||(47177080-47177222)
chr1 (134-270)||(23783240-23783376)
chr1 (1-239)||(13214854-13215097)
chr1 (155-270)||(6822777-6822893)
chr1 (1-165)||(28207331-28207500)
chr1 (1-185)||(30790658-30790848)
chr1 (1-168)||(41646764-41646936)
chr1 (6-152)||(47451508-47451659)
chr1 (1-267)||(3579881-3580154)
chr1 (167-270)||(20291282-20291386)
chr1 (1-270)||(39462260-39462535)
chr1 (155-245)||(16231368-16231458)
chr1 (1-145)||(38925743-38925892)
chr1 (2-76)||(28998519-28998593)
chr1 (2-76)||(29004235-29004309)
chr1 (61-146)||(49687406-49687496)
chr1 (5-142)||(14098239-14098380)
chr1 (5-77)||(49495468-49495540)
chr1 (1-123)||(6822904-6823031)
chr1 (1-84)||(20291390-20291473)
chr1 (1-72)||(25251540-25251611)
chr1 (1-63)||(25248779-25248841)
chr1 (1-66)||(2617467-2617532)
chr1 (1-86)||(16226098-16226183)
chr1 (1-86)||(16231532-16231617)
chr1 (1-82)||(16428588-16428669)
chr1 (1-73)||(17324009-17324081)
chr1 (1-76)||(6995965-6996040)
chr1 (2-73)||(14183852-14183923)
chr1 (2-77)||(18800835-18800910)
chr1 (1-66)||(18307060-18307125)
chr1 (205-270)||(38925931-38925996)
chr1 (1-73)||(11457740-11457812)
chr1 (1-73)||(17186393-17186465)
chr1 (1-77)||(31423139-31423215)
chr1 (1-76)||(31735786-31735865)
chr1 (1-73)||(50079086-50079158)
chr1 (1-72)||(17318838-17318909)
chr1 (2-77)||(42922174-42922249)
chr1 (204-270)||(14098442-14098508)
chr1 (1-74)||(47177301-47177378)
chr1 (1-74)||(47179652-47179729)
chr1 (224-270)||(2617282-2617328)
chr1 (15-73)||(40133879-40133936)
chr1 (1-77)||(43104099-43104177)
chr1 (205-270)||(47451407-47451472)
chr1 (5-76)||(2510593-2510668)
chr1 (1-75)||(9241351-9241425)
chr1 (205-270)||(25133683-25133748)
chr1 (21-66)||(26520404-26520448)
chr1 (1-76)||(27337203-27337282)
chr1 (1-73)||(31489859-31489931)
chr1 (1-73)||(50076937-50077009)
chr1 (5-73)||(50248841-50248909)
chr1 (2-66)||(13127895-13127958)
chr1 (1-71)||(21948452-21948526)
chr1 (1-71)||(39932017-39932089)
[»] chr3 (91 HSPs)
chr3 (1-270)||(22114566-22114840)
chr3 (2-270)||(18099432-18099705)
chr3 (1-270)||(1321163-1321437)
chr3 (1-270)||(5191375-5191649)
chr3 (131-270)||(6063865-6064004)
chr3 (127-270)||(38210069-38210212)
chr3 (127-270)||(50493678-50493821)
chr3 (1-270)||(32264300-32264578)
chr3 (132-270)||(53896614-53896752)
chr3 (1-270)||(26720270-26720544)
chr3 (2-270)||(10956289-10956561)
chr3 (1-270)||(5522876-5523150)
chr3 (1-179)||(45882752-45882935)
chr3 (2-270)||(18097162-18097420)
chr3 (2-179)||(10958585-10958767)
chr3 (155-270)||(35777165-35777280)
chr3 (127-270)||(5899459-5899604)
chr3 (155-270)||(38889759-38889875)
chr3 (127-270)||(5885985-5886129)
chr3 (1-170)||(3859350-3859524)
chr3 (143-268)||(10192401-10192525)
chr3 (127-215)||(25388654-25388742)
chr3 (154-268)||(10085492-10085605)
chr3 (1-145)||(11162997-11163146)
chr3 (37-270)||(24177001-24177239)
chr3 (1-146)||(18162510-18162659)
chr3 (190-270)||(7606881-7606961)
chr3 (1-146)||(11170250-11170400)
chr3 (1-117)||(12268227-12268348)
chr3 (1-146)||(10084650-10084804)
chr3 (1-146)||(10191570-10191724)
chr3 (155-270)||(11162893-11163008)
chr3 (2-88)||(15780769-15780855)
chr3 (1-146)||(32218941-32219091)
chr3 (10-146)||(48361940-48362081)
chr3 (155-270)||(6719532-6719649)
chr3 (1-146)||(24979553-24979703)
chr3 (155-214)||(6066195-6066254)
chr3 (157-270)||(11170147-11170260)
chr3 (224-270)||(25388620-25388666)
chr3 (5-77)||(53597161-53597232)
chr3 (224-270)||(3859319-3859365)
chr3 (224-270)||(6066243-6066289)
chr3 (1-86)||(35777332-35777417)
chr3 (1-77)||(28761689-28761765)
chr3 (2-77)||(23633380-23633455)
chr3 (1-75)||(4308542-4308616)
chr3 (1-86)||(6063707-6063794)
chr3 (1-66)||(6561741-6561806)
chr3 (1-73)||(1626944-1627016)
chr3 (1-74)||(6066057-6066131)
chr3 (2-77)||(23636947-23637022)
chr3 (3-75)||(39715392-39715463)
chr3 (1-75)||(35918210-35918284)
chr3 (1-75)||(43226008-43226082)
chr3 (1-75)||(51727267-51727341)
chr3 (205-270)||(32218838-32218903)
chr3 (205-270)||(48362119-48362184)
chr3 (1-76)||(4104156-4104235)
chr3 (1-73)||(5927025-5927097)
chr3 (1-73)||(28137556-28137628)
chr3 (1-73)||(47701856-47701928)
chr3 (4-76)||(53915760-53915832)
chr3 (2-73)||(880714-880785)
chr3 (1-72)||(6231374-6231445)
chr3 (1-72)||(43421676-43421747)
chr3 (1-72)||(51675016-51675087)
chr3 (1-76)||(51943292-51943367)
chr3 (2-73)||(53468717-53468788)
chr3 (1-73)||(54691835-54691906)
chr3 (10-76)||(1313331-1313397)
chr3 (1-75)||(43228213-43228287)
chr3 (224-270)||(5858199-5858245)
chr3 (224-270)||(27101749-27101795)
chr3 (224-270)||(43225829-43225875)
chr3 (224-270)||(51727495-51727541)
chr3 (1-73)||(3314608-3314680)
chr3 (225-270)||(4308771-4308816)
chr3 (101-146)||(6719499-6719544)
chr3 (205-270)||(10949743-10949808)
chr3 (134-179)||(20031742-20031787)
chr3 (205-270)||(27762490-27762555)
chr3 (1-73)||(28100302-28100374)
chr3 (1-73)||(43423724-43423796)
chr3 (1-73)||(53591119-53591191)
chr3 (2-73)||(890033-890104)
chr3 (1-72)||(3306724-3306795)
chr3 (42-86)||(5886196-5886240)
chr3 (42-86)||(5899671-5899715)
chr3 (34-86)||(6719405-6719457)
chr3 (133-185)||(11079257-11079309)
[»] chr2 (39 HSPs)
chr2 (1-266)||(19504608-19504878)
chr2 (1-270)||(24162475-24162750)
chr2 (1-266)||(19502274-19502544)
chr2 (1-268)||(27104519-27104791)
chr2 (1-270)||(21520956-21521232)
chr2 (1-270)||(42064233-42064507)
chr2 (127-270)||(36559213-36559356)
chr2 (1-269)||(6259078-6259351)
chr2 (134-270)||(36561539-36561675)
chr2 (127-270)||(45332530-45332673)
chr2 (1-180)||(13910307-13910491)
chr2 (1-270)||(22407672-22407946)
chr2 (1-270)||(40032321-40032584)
chr2 (1-161)||(22287599-22287764)
chr2 (155-266)||(43623968-43624079)
chr2 (1-123)||(6264408-6264535)
chr2 (37-178)||(35107110-35107256)
chr2 (1-77)||(37963190-37963266)
chr2 (1-76)||(42452700-42452775)
chr2 (1-146)||(43623831-43623980)
chr2 (1-117)||(18800565-18800686)
chr2 (1-73)||(31733028-31733100)
chr2 (2-73)||(11578368-11578439)
chr2 (1-73)||(19007560-19007632)
chr2 (1-73)||(22163210-22163282)
chr2 (1-75)||(45280248-45280322)
chr2 (5-66)||(3022090-3022151)
chr2 (155-267)||(6264546-6264658)
chr2 (127-169)||(36561490-36561532)
chr2 (2-77)||(12342673-12342749)
chr2 (1-73)||(17849037-17849109)
chr2 (1-73)||(28196557-28196629)
chr2 (2-76)||(42923773-42923849)
chr2 (102-185)||(38190737-38190819)
chr2 (135-169)||(8040452-8040486)
chr2 (1-73)||(11739823-11739895)
chr2 (1-76)||(23452500-23452579)
chr2 (1-75)||(5377692-5377770)
chr2 (226-270)||(45280457-45280501)
[»] chr6 (45 HSPs)
chr6 (1-270)||(14507438-14507714)
chr6 (1-270)||(8995257-8995530)
chr6 (1-270)||(9019704-9019977)
chr6 (127-270)||(26068737-26068880)
chr6 (1-268)||(11983292-11983562)
chr6 (127-270)||(26066466-26066609)
chr6 (127-270)||(33308687-33308830)
chr6 (127-270)||(33310956-33311099)
chr6 (127-270)||(29755134-29755277)
chr6 (1-270)||(19227671-19227946)
chr6 (8-186)||(30729098-30729281)
chr6 (2-270)||(15530386-15530659)
chr6 (1-179)||(15541403-15541586)
chr6 (5-146)||(32279898-32280043)
chr6 (1-146)||(1072140-1072290)
chr6 (1-186)||(15532944-15533134)
chr6 (101-186)||(4816636-4816720)
chr6 (2-76)||(17852518-17852592)
chr6 (89-171)||(24192651-24192733)
chr6 (1-73)||(32447579-32447651)
chr6 (1-76)||(12195778-12195853)
chr6 (89-171)||(24191554-24191636)
chr6 (1-77)||(3390354-3390430)
chr6 (226-270)||(4816739-4816784)
chr6 (1-73)||(13057173-13057245)
chr6 (1-66)||(13870685-13870749)
chr6 (1-73)||(24338711-24338783)
chr6 (1-68)||(14459028-14459095)
chr6 (2-77)||(15346366-15346441)
chr6 (1-75)||(28241584-28241658)
chr6 (205-270)||(1072328-1072393)
chr6 (1-73)||(25477253-25477325)
chr6 (1-76)||(2629148-2629228)
chr6 (1-73)||(12161818-12161889)
chr6 (1-75)||(1230512-1230586)
chr6 (1-71)||(3632201-3632271)
chr6 (224-270)||(1230719-1230765)
chr6 (224-270)||(17695334-17695380)
chr6 (224-270)||(26064758-26064804)
chr6 (224-270)||(26084727-26084773)
chr6 (224-270)||(28241812-28241858)
chr6 (133-179)||(33215571-33215617)
chr6 (1-73)||(13039733-13039805)
chr6 (1-77)||(25466433-25466509)
chr6 (1-76)||(30034866-30034945)
[»] chr5 (72 HSPs)
chr5 (1-270)||(38881847-38882122)
chr5 (1-268)||(4236374-4236645)
chr5 (127-270)||(34477487-34477630)
chr5 (1-270)||(21947772-21948042)
chr5 (1-270)||(25921736-25921990)
chr5 (88-270)||(31544800-31544982)
chr5 (155-270)||(2174682-2174797)
chr5 (127-270)||(10749507-10749650)
chr5 (5-270)||(16775899-16776170)
chr5 (101-270)||(31542444-31542613)
chr5 (127-270)||(10756962-10757105)
chr5 (127-270)||(15354920-15355063)
chr5 (127-270)||(15357196-15357339)
chr5 (155-270)||(34479855-34479970)
chr5 (1-270)||(20507725-20507999)
chr5 (127-270)||(23664836-23664979)
chr5 (127-270)||(23667111-23667254)
chr5 (127-270)||(23793608-23793751)
chr5 (34-181)||(21684757-21684909)
chr5 (2-146)||(36402592-36402740)
chr5 (155-270)||(38960487-38960602)
chr5 (155-270)||(39797851-39797966)
chr5 (127-215)||(31179809-31179897)
chr5 (1-125)||(2818599-2818728)
chr5 (2-146)||(12556187-12556336)
chr5 (155-270)||(659715-659829)
chr5 (1-146)||(6756360-6756510)
chr5 (208-270)||(21684905-21684967)
chr5 (205-270)||(18186520-18186585)
chr5 (136-270)||(20504316-20504450)
chr5 (1-129)||(2174802-2174935)
chr5 (224-270)||(31179885-31179931)
chr5 (1-75)||(39854426-39854499)
chr5 (155-270)||(31466379-31466494)
chr5 (2-71)||(18509582-18509652)
chr5 (1-86)||(31542666-31542751)
chr5 (5-144)||(31466245-31466389)
chr5 (2-76)||(10586780-10586857)
chr5 (1-75)||(17818753-17818826)
chr5 (1-74)||(31179634-31179707)
chr5 (1-86)||(31545011-31545096)
chr5 (1-73)||(17072827-17072899)
chr5 (1-73)||(24126800-24126872)
chr5 (1-73)||(25904047-25904119)
chr5 (205-270)||(36402778-36402843)
chr5 (35-130)||(39797970-39798070)
chr5 (1-75)||(10529362-10529436)
chr5 (2-71)||(18511476-18511547)
chr5 (2-76)||(26097674-26097748)
chr5 (2-76)||(41585970-41586044)
chr5 (1-73)||(36208524-36208597)
chr5 (2-75)||(40221464-40221537)
chr5 (137-186)||(659850-659899)
chr5 (2-66)||(6661446-6661510)
chr5 (1-73)||(34530929-34531001)
chr5 (1-34)||(39398256-39398289)
chr5 (1-75)||(4409999-4410077)
chr5 (205-270)||(2818779-2818845)
chr5 (2-76)||(26098515-26098589)
chr5 (132-179)||(42238047-42238094)
chr5 (213-270)||(661227-661284)
chr5 (224-270)||(1240080-1240126)
chr5 (224-270)||(6747046-6747092)
chr5 (4-73)||(20044954-20045023)
chr5 (1-65)||(2954368-2954432)
chr5 (1-72)||(18466625-18466700)
chr5 (1-76)||(18468948-18469027)
chr5 (8-76)||(18596588-18596656)
chr5 (1-73)||(20042994-20043066)
chr5 (205-270)||(40222416-40222481)
chr5 (205-270)||(42237956-42238021)
chr5 (226-270)||(10529592-10529636)
[»] chr7 (58 HSPs)
chr7 (1-270)||(27306492-27306765)
chr7 (1-270)||(3878324-3878603)
chr7 (127-270)||(1047358-1047501)
chr7 (1-270)||(35381-35655)
chr7 (1-270)||(25542283-25542556)
chr7 (127-270)||(2935072-2935215)
chr7 (127-270)||(9027542-9027685)
chr7 (127-270)||(22107869-22108012)
chr7 (127-270)||(22136880-22137023)
chr7 (127-270)||(40549629-40549772)
chr7 (127-270)||(40551907-40552050)
chr7 (1-185)||(44401-44590)
chr7 (1-270)||(18567365-18567639)
chr7 (1-270)||(31435310-31435584)
chr7 (155-270)||(40837144-40837259)
chr7 (5-176)||(22392319-22392495)
chr7 (155-270)||(26804347-26804462)
chr7 (1-146)||(1049558-1049708)
chr7 (2-77)||(7188493-7188568)
chr7 (2-76)||(42331263-42331337)
chr7 (1-88)||(22251805-22251892)
chr7 (1-146)||(40837005-40837156)
chr7 (1-88)||(26804512-26804595)
chr7 (2-72)||(21990106-21990175)
chr7 (2-71)||(24817613-24817682)
chr7 (1-73)||(11355212-11355284)
chr7 (6-77)||(20091808-20091880)
chr7 (1-73)||(20137372-20137444)
chr7 (1-77)||(22828896-22828972)
chr7 (1-73)||(24748548-24748620)
chr7 (1-71)||(20625990-20626064)
chr7 (1-71)||(20629881-20629955)
chr7 (1-71)||(20642300-20642374)
chr7 (2-76)||(443546-443620)
chr7 (5-72)||(3677235-3677301)
chr7 (2-71)||(7094686-7094759)
chr7 (1-66)||(24258424-24258489)
chr7 (1-76)||(3035668-3035747)
chr7 (2-73)||(4296199-4296271)
chr7 (1-73)||(21679981-21680053)
chr7 (1-72)||(24465503-24465575)
chr7 (1-76)||(38393933-38394012)
chr7 (1-71)||(7470285-7470359)
chr7 (1-71)||(7472243-7472317)
chr7 (1-76)||(31156174-31156249)
chr7 (133-185)||(42006404-42006456)
chr7 (2-76)||(13099740-13099814)
chr7 (190-270)||(1049730-1049811)
chr7 (224-270)||(7464981-7465027)
chr7 (2-73)||(42223110-42223182)
chr7 (57-122)||(45366446-45366516)
chr7 (1-73)||(21678020-21678092)
chr7 (1-76)||(28485513-28485592)
chr7 (225-270)||(40946076-40946121)
chr7 (1-73)||(44724533-44724605)
chr7 (128-172)||(38430821-38430865)
chr7 (226-270)||(48457443-48457487)
chr7 (1-75)||(48457601-48457679)
[»] chr8 (47 HSPs)
chr8 (1-270)||(12517287-12517563)
chr8 (1-268)||(14807552-14807823)
chr8 (1-270)||(27826784-27827058)
chr8 (1-270)||(27829095-27829369)
chr8 (127-270)||(43079349-43079492)
chr8 (1-270)||(15072508-15072782)
chr8 (133-270)||(43081724-43081861)
chr8 (127-270)||(18812670-18812813)
chr8 (1-270)||(15067779-15068053)
chr8 (127-270)||(18810485-18810628)
chr8 (2-169)||(28251831-28252002)
chr8 (101-270)||(44720619-44720788)
chr8 (1-148)||(2468361-2468513)
chr8 (1-146)||(3886181-3886334)
chr8 (1-146)||(4423940-4424090)
chr8 (134-268)||(28251988-28252122)
chr8 (1-86)||(44720830-44720915)
chr8 (163-251)||(3886330-3886419)
chr8 (1-77)||(13858747-13858823)
chr8 (2-76)||(181534-181608)
chr8 (155-270)||(4423837-4423952)
chr8 (1-77)||(14419454-14419530)
chr8 (1-73)||(21482322-21482394)
chr8 (1-73)||(5372441-5372512)
chr8 (1-88)||(18810693-18810780)
chr8 (1-88)||(18812878-18812965)
chr8 (1-75)||(26775199-26775273)
chr8 (2-76)||(41384742-41384815)
chr8 (1-77)||(15185973-15186049)
chr8 (1-73)||(33541651-33541723)
chr8 (1-73)||(35872641-35872713)
chr8 (1-76)||(43530121-43530200)
chr8 (1-75)||(1225164-1225238)
chr8 (2-76)||(41382670-41382744)
chr8 (1-76)||(3874003-3874082)
chr8 (1-73)||(5623001-5623073)
chr8 (1-73)||(14477276-14477348)
chr8 (1-73)||(25952521-25952593)
chr8 (1-73)||(27107160-27107232)
chr8 (1-76)||(32339302-32339381)
chr8 (224-270)||(9021590-9021636)
chr8 (1-76)||(15809212-15809291)
chr8 (1-73)||(30480766-30480838)
chr8 (1-72)||(36865538-36865610)
chr8 (37-77)||(6375985-6376025)
chr8 (2-77)||(27911011-27911086)
chr8 (2-77)||(27957430-27957505)
[»] scaffold0127 (1 HSPs)
scaffold0127 (127-270)||(12909-13052)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-270)||(2631-2905)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-268)||(69554-69829)
scaffold0025 (155-268)||(73427-73540)
scaffold0025 (1-145)||(73286-73438)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-270)||(14769-15044)
[»] scaffold0140 (2 HSPs)
scaffold0140 (127-270)||(21917-22060)
scaffold0140 (127-270)||(24192-24335)
[»] scaffold0472 (2 HSPs)
scaffold0472 (127-270)||(5929-6072)
scaffold0472 (1-74)||(6151-6224)
[»] scaffold0068 (2 HSPs)
scaffold0068 (34-181)||(29001-29153)
scaffold0068 (208-270)||(28943-29005)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-150)||(3868-4022)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-75)||(183903-183976)
scaffold0005 (2-76)||(51959-52035)
[»] scaffold0552 (2 HSPs)
scaffold0552 (1-75)||(1094-1168)
scaffold0552 (225-270)||(1302-1347)
[»] scaffold0038 (2 HSPs)
scaffold0038 (1-75)||(41746-41820)
scaffold0038 (224-270)||(41974-42020)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-73)||(79812-79884)
[»] scaffold0224 (1 HSPs)
scaffold0224 (2-77)||(16082-16157)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-76)||(79135-79210)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 51015316 - 51015042
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| |||||||||||||||| |||||||||||||||||||||     |||| |    
T  51015316 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 51015218  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||    
T  51015217 gcactgaaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaac 51015118  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  51015117 tgaaacctccatcgtgccacgttgccttgccatcatgccacgattctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 2 - 268
Target Start/End: Original strand, 37089635 - 37089910
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaa--aagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    ||||||||||||||||||||||| ||||||||    |||||||  |||||| || ||||||||||||| ||||||| | |||||||||||     ||||     
T  37089635 ttctaaacccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatc 37089734  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||  ||||||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||  || | ||||    
T  37089735 tgcacctaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctcacctaaaaaa 37089834  T
Q  194 ctaaaacct-tcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37089835 ctaaaacatctcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaactct 37089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 22802998 - 22803270
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| ||    
T  22802998 ttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 22803096  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    ||||  ||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||  ||  ||||||    
T  22803097 cact-caaaatacgtttttgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctt-tcctcaaaact 22803194  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | ||||||||||||||||  |||||||| ||||||||||  |||||  ||||||||||||||||||||    
T  22803195 gaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctatagaaatttgattttaagttaactctca 22803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 24888866 - 24888594
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |    
T  24888866 tttctaaacccttgtttcagccccctctatctctaa-gtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatct 24888768  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||  |||      
T  24888767 gcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaact 24888669  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    | |||||| | ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  24888668 tgaaacctccaatcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgattttaagttaactct 24888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 36919848 - 36920123
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    |||||||||||||||||||||||| | |||||   |||||||||||||||| || ||||||||||||| |||||||||||||||||||||     ||||     
T  36919848 tttctaaacccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 36919947  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||  ||||||||||||||  ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||   ||||    
T  36919948 tgcacccaaaaatacgtttctactattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttgcctc-aaaa 36920046  T
Q  194 ctaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
     | |||||| || |||||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  36920047 ttgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcag-aacctgattttaagttaactctca 36920123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 9174409 - 9174682
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| || ||||| || ||||||||||||| ||||||| | ||||||||  |     |||| |    
T  9174409 tttctaaacccttgtttcagccccctctatctccaa-gtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatct 9174507  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||| ||||||||| ||| ||| |||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||||| |  ||||    
T  9174508 gcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcctaataaac 9174607  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| |||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  9174608 taaaacctccatcgtgctacgttgcctagccgtcgtgccacgattctgcag-aacctgattttaagttaactctca 9174682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 101 - 270
Target Start/End: Original strand, 9176864 - 9177033
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaac 200  Q
    ||||||| ||||||||| ||| ||| |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  9176864 aaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaac 9176963  T
Q  201 cttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  9176964 ctccatcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctgattttaagttaactctca 9177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 5637728 - 5638004
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaa 91  Q
    ||||||||| |||||||||||||| ||||||||    ||||||| |||| ||| || ||||||||||||| |||||||||||||||||||||     |||    
T  5637728 tttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 5637827  T
Q  92 tatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaa 191  Q
    | |||||  |||| |||||||||||| ||||||| |||| ||||||| ||||||| ||||| ||||||||| || ||||||||||||||||||||   ||    
T  5637828 tctgcacccaaaa-tacgtttctgtttttcgctgccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgcctc-aa 5637925  T
Q  192 aactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||| |||||| |||||||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||||||    
T  5637926 aactgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctca 5638004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 36921757 - 36922031
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||||||||| || ||||||||||||  |||||||||||||||||||||     |||| |    
T  36921757 tttctaagcccttgtttcaccccctctatctctcaaagtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatct 36921856  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||   ||||||||||||||||||||||||| ||   ||||||||||||||  |||||||||||||||||||||||||||||||| |||| ||  |||||    
T  36921857 gcatccaaaaatacgtttctgttattcgctgccaatgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttg-cctcaaaac 36921955  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||| ||||||  |||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  36921956 tgaaacctccaatcgtgccatgttgcccagccatcgtaccacgattttgcag-aacctgattttaagttaactctca 36922031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 270
Target Start/End: Complemental strand, 48486388 - 48486115
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| ||    
T  48486388 ttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 48486290  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  ||||||||||||||||||||||||| |||| |||||| ||||||| ||| ||||||||||||||||||    ||||||| |||| ||  ||||||    
T  48486289 cacccaaaaatacgtttctgttattcgctgccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaact 48486191  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | |||||||||||||||   ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  48486190 gaaacctccaatcgtgccacgttgctcagccatcgtgccacgatttctgcag-gacctgattttaagttaactctca 48486115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 16932215 - 16932358
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||     
T  16932215 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 16932314  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16932315 tcgtgccacgattctgcagaaacctgattttaagttaactctca 16932358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 22044653 - 22044928
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || | ||||||||||| |||||||||||||||||||||     |||| |    
T  22044653 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 22044751  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc--ccagaaa 192  Q
    ||||| ||||||| ||||||||| ||| ||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  | | |||    
T  22044752 gcact-aaaaatatgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaa 22044850  T
Q  193 actaaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | | |||||| ||||||||||||||||| | | |||||||||||||| |||||| | | ||||||||||||||||||||    
T  22044851 aatgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattcctgcag-atcttgattttaagttaactctca 22044928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 11006500 - 11006779
Alignment:
Q  1 tttctaaacccttgtttcagcccc-------tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt----- 88  Q
    ||||||||||||||||||||||||       ||| ||||||||   || ||||||| || ||||||||||||| ||||||| | ||||||||| |         
T  11006500 tttctaaacccttgtttcagccccctctatctctctctcaaaa---tagtctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaac 11006596  T
Q  89 aaatatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgccca 188  Q
    |||| |||||  ||||||| ||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  11006597 aaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccta 11006696  T
Q  189 gaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgca-gaaacctgattttaagttaactctca 270  Q
     |||| | |||||| |||||||||||||||||  || |||||||||||||||||||  |||||||||||||||||||||||||    
T  11006697 aaaaattgaaacctccatcgtgccacgttgcccagcgatcgtgccacgattctgcataaaacctgattttaagttaactctca 11006779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 31849862 - 31850136
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||  | |||| |||||||| ||   |||||||| || |||||||||||||||||||||     |||| |    
T  31849862 tttctaaacccttgtttcagccccctctatctccta-gtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatct 31849960  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  |||||    
T  31849961 gcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgccc-caaaac 31850059  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  || |||||||||| ||| |||||| | | ||||||||||||||||||||    
T  31850060 tgaaacctccaatcgtgccacgttgcccagcaatcgtgccacaattcctgcag-atcttgattttaagttaactctca 31850136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 40091678 - 40091952
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| |||||||||||||||||||||     ||||||    
T  40091678 tttctaaacccttgtttcagccccctctatctcaaa-gtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatat 40091776  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||||||||||||||||  |||||||||||||||  |||||||||| ||||||||||||||||| || ||||||||||||| || |||  |   |||||    
T  40091777 gcactgaaaaatacgtttacgttattcgctgtcagtgcaccatcgtgtcacgttgcgaccccatcatggcacgatttttccaatggctt-acttcaaaac 40091875  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | ||| || | ||||||||||||| ||   ||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  40091876 tgaaatctccaatcgtgccacgttacccaaccaccgtgccacgattattgcag-aacctgattttaagttaactctca 40091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 270
Target Start/End: Original strand, 3824875 - 3825110
Alignment:
Q  40 tactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtcagcccac 134  Q
    |||||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |||||  ||||||||||||||||||||||  | || | |||    
T  3824875 tactctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcac 3824974  T
Q  135 catcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttc-atcgtgccacgttgccttgccatcgtgcc 233  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| ||| ||  |||||| |||||| | ||||||||| ||||||  ||||||||| |    
T  3824975 catcgtgccacgatgcgaccccattgtgccatgatttttccagtgctttg-cctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgtgtc 3825073  T
Q  234 acgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||||||||||||||||||||||||||    
T  3825074 acgattctgcagaaacctgattttaagttaactctca 3825110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 16934569 - 16934712
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  |||     
T  16934569 cagcgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccatgttgcccagccg 16934668  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16934669 tcgtgccacgattctgcagaaacctgattttaagttaactctca 16934712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 22783172 - 22783315
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||  || |    
T  22783172 cagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcta 22783271  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  22783272 tcgtaccacgattctgcagaaacctgattttaagttaactctca 22783315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 38409236 - 38408995
Alignment:
Q  34 aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtca 128  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |||||| ||||||| ||||||||| ||||| | ||    
T  38409236 aaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgccgcca 38409137  T
Q  129 gcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttc-atcgtgccacgttgccttgccat 227  Q
     | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||  |||  | |||||| | ||||||||||| ||||  || ||    
T  38409136 acgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgatgcccagcaat 38409038  T
Q  228 cgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  38409037 cgtgccacgattctgcagaaatctaattttaagttaactctca 38408995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 22780807 - 22780950
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||  || ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||  || |    
T  22780807 cagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcta 22780906  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  22780907 tcgtaccacgattctgcagaaacctgattttaagttaactctca 22780950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 5198490 - 5198300
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  5198490 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 5198392  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| || || |||||||||||||||||||||||| || |||||    
T  5198391 gcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgcc 5198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 11435025 - 11434771
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  11435025 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 11434927  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaaa 193  Q
    ||||| ||||||| ||||||||| ||||||| |||| |||||                     |||||||||||||||||||||| |||||| || ||||    
T  11434926 gcactcaaaaatatgtttctgtttttcgctgccagcgcacca---------------------tcgtgccacgatttttccagtgtcttgcctcaaaaaa 11434848  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| |||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  11434847 ctgaaacctccatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacctgattttaagttaactctca 11434771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 7941251 - 7941135
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcc-cagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 253  Q
    |||||||||||| ||||||||||||||||||| || |||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7941251 ccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 7941152  T
Q  254 ttttaagttaactctca 270  Q
    |||||||||||||||||    
T  7941151 ttttaagttaactctca 7941135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24879059 - 24878887
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||| ||||||||||| |||||||| || |||||||| |||| || ||||||||||||| |||||||||||||||||||||     ||||||    
T  24879059 tttctaaaccctagtttcagccccctctatctccaa-gtttactcggatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatat 24878961  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacga 168  Q
    ||||  |||||||||||||||||||||| || ||||  |||||||||||||||||| | |||||||||||||||    
T  24878960 gcacccaaaaatacgtttctgttattcgatgccagcgtaccatcgtgccacgttgcaatcccatcgtgccacga 24878887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 22046948 - 22047135
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| ||| |||| || | ||||||||||| |||||||||||||||||||||     |||| |    
T  22046948 tttctaaacccttgtttcagccccctctatctccaa-gtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 22047046  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc 185  Q
    ||||| ||||||| ||||||||| ||| ||| |||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  22047047 gcact-aaaaatatgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 619714 - 619882
Alignment:
Q  5 taaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcac 98  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| ||||||||||| |||||||||     |||| |  ||    
T  619714 taaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctac 619812  T
Q  99 tgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacga 168  Q
      ||||||| ||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||||    
T  619813 ccaaaaatatgtttctgttattcgccgccagcgcaccattgtgccacgttgcgaccccatcgtgccacga 619882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 52942709 - 52942881
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaa--gtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |  ||||||||||||| | |||||||  ||||||||||     ||||     
T  52942709 tttctaaacccttgtttcagcccctctatctcaaa-gtttagtctgatatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatc 52942807  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacg 167  Q
    |||||  ||||||| |||| |||||||||||| |||| || ||||||||||||||| |||||||||||||||||    
T  52942808 tgcaccaaaaaatatgtttatgttattcgctgccagcgcatcatcgtgccacgttgtgaccccatcgtgccacg 52942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 47274797 - 47274643
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |    
T  47274797 tttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatct 47274699  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgc 150  Q
    ||||  |||||||||||| |||||||||||| || | |||||||||||||||||||    
T  47274698 gcacccaaaaatacgtttatgttattcgctgccatcgcaccatcgtgccacgttgc 47274643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 22801126 - 22801274
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| ||    
T  22801126 ttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctg 22801224  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  ||||||||||||||||||| |||| | || |||||||||||||||    
T  22801225 cact-caaaatacgtttctgttatttgctgccggcgcaccatcgtgccacg 22801274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24880521 - 24880353
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||| ||||  ||||| |||||||| || |||||||| |||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  24880521 tttctaaaccctagtttacgccccctctatctccaa-gtttactccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 24880423  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgcc 164  Q
    |||   ||||||||||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||    
T  24880422 gcatccaaaaatacgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaatcccatcgtgcc 24880353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 9148323 - 9148140
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    |||||||||||||| ||||||||| ||||||||  ||||||| |||||||| || | ||||||||||| |||||||||||||||||||||     ||||     
T  9148323 tttctaaacccttgcttcagccccctctatctctcaaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 9148224  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    |||||   ||||||||||||||||||| ||||        ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  9148223 tgcac-ccaaaatacgtttctgttatttgctg--------ccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttgcc 9148140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 18847096 - 18846925
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaac 200  Q
    ||||||| ||||||||| ||| | |  ||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||   |||||| ||||    
T  18847096 aaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttttccagtaccttgcctc-aaaactgaaac 18846998  T
Q  201 cttca-tcgtgccacgttgccttgccatcgtgccacgattctgcag--aaacctgattttaagttaactctca 270  Q
    || || |||||||||| | ||   | ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  18846997 ctccaatcgtgccacgattcccaacaatcgtgccacgattctgcagaaaaatctgattttaagttaactctca 18846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 11008960 - 11009045
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    ||||||| ||||||||| || |||| |||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11008960 aaaaatatgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 11009045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 8756513 - 8756679
Alignment:
Q  2 ttctaaacccttgttt-cagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||| |||||||| |||||||||  ||||||||||||| || ||||||||||||| ||||||||||| ||| |||||     |||| |    
T  8756513 ttctaaacccttgttttcagccccttctatctcaag-gtttactctgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatct 8756611  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtg 162  Q
    |||| || ||||| |||||||||||||||   |||| ||||| | || |||||||||| | |||||||    
T  8756612 gcaccgagaaatatgtttctgttattcgcctccagcgcaccaacatggcacgttgcgatctcatcgtg 8756679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7941391 - 7941263
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaag-tttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    |||||||||||||||||||||||| ||||||||    | ||| |||||||| || ||||||||||||| ||||||| |||||||||||||     ||||     
T  7941391 tttctaaacccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatc 7941292  T
Q  94 tgcactgaaaaatacgtttctgttattcg 122  Q
    |||||  ||||||||||||||||||||||    
T  7941291 tgcacccaaaaatacgtttctgttattcg 7941263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36378362 - 36378288
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||||||| ||||||||||  ||||| ||||||| |||||||||||||||| ||||||||    
T  36378362 tttctaaacccttgtttcagccccgtctatctcaag-gtttattctgatacaaagtctatatttatagtaaaagta 36378288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14633389 - 14633316
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||| || ||||||||||||| | ||||||    
T  14633389 tttctaaacctttgtttcagcccttctatctc-aaagtttactctgatacaaggtctatatttatagtgaaagta 14633316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3937472 - 3937543
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||| ||||||    
T  3937472 tttctaaacccttgtttcagctccctctatctc-aaggtttactctgata-aaagtctatatttatagtaaaag 3937543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53405200 - 53405122
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  53405200 tttctaaacccttgtttcagcccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 53405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6764909 - 6764835
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  6764909 tttctaaacccttgtttcagccccttctatctc-aaagtttgctctgatacaaggtctatatttatagtgaaagta 6764835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 22801262 - 22801356
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaac 249  Q
    |||||||||||||||||||||||| ||||| ||  |||||| |||||| | |||||| |||||||||   ||||||||||||||||||| ||||||    
T  22801262 ccatcgtgccacgatttttccagttccttg-cctcaaaactgaaacctccaatcgtgtcacgttgcccaaccatcgtgccacgattctgtagaaac 22801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 56030513 - 56030443
Alignment:
Q  2 ttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||| |||| ||||||||||| |||||    
T  56030513 ttctaaacccttgtttcagccccttctatctcaag-gtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17662497 - 17662576
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||||||| ||||||||    ||||||| |||||||| || ||||||||||||| |||||||||    
T  17662497 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 17662576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24446842 - 24446914
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  24446842 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 24446914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 14787695 - 14787771
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctc-aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||| ||||||||||||  |||||||| | ||||| || ||||||||||||| |||||||||    
T  14787695 ttctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagtat 14787771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15032800 - 15032875
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||||||||| | ||||||||  |||||||||| ||  ||||||||||||||| ||||||||||    
T  15032800 ttctaaacccttgtttcagccccctttatctcaag-gtttactctggtaccaagtctatatttatagtaaaagtatc 15032875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18409610 - 18409681
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||| ||||||||| |  |||||| |||||| ||| |||||||||||| ||||||    
T  18409610 tttctaaacccttgtttcagcctctctatctc-attgtttacactgatacaaattctatatttatagtaaaag 18409681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 19095951 - 19095880
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  19095951 ttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 19095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 22048493 - 22048573
Alignment:
Q  190 aaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||| ||||||||||||||||| | | ||||||||||||||||   | | | ||||||||||||||||||||    
T  22048493 aaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattcttgcggatcttgattttaagttaactctca 22048573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33415750 - 33415821
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| |||| |||||||| || |||||    
T  33415750 tttctaaacccttgtttcagccccctctatctc-aaggtttactctgatacaaagcctatatttgtagtaaaa 33415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44600101 - 44600176
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| |||||||||||| ||||||| || | ||| || ||||||||||||| |||||||||    
T  44600101 tttctaaacccttgtttcagccccctctatctc-aaagtttgctttaatacaaggtctatatttatagtaaaagtat 44600176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40637144 - 40637070
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| || ||||||||||||| | ||||||    
T  40637144 tttctaaacccttgtttcagccccctctatctc-caagtttgctctgatacaaggtctatatttatagtgaaagta 40637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 8528966 - 8528920
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  8528966 ccatcgtgacacgattctccagaaatctgattttaagttaactctca 8528920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16934406 - 16934479
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    ||||||||||||||| |||||||| ||||||||||| |||| || ||||| || ||||||||||||| |||||||    
T  16934406 tttctaaacccttgtatcagccccctctatctcaaa-gtttgctttgatacaaggtctatatttatagtaaaagt 16934479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18847223 - 18847138
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    ||||||||||||||||||| |||| ||||||||||| ||||  | ||||| || ||||||||||||| ||||||| | |||||||||    
T  18847223 tttctaaacccttgtttcaaccccctctatctcaaa-gtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaat 18847138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 9176737 - 9176821
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaa 85  Q
    |||||||||||||||||||| ||||||||||||  |||||| || ||||| || ||||||||||||| |||| || | ||||||||    
T  9176737 tttctaaacccttgtttcagccccctctatctc-caagtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaa 9176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38270249 - 38270321
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||| | |||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  38270249 tttctaaacccttgtttcagcctcttctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 38270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38928441 - 38928513
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||| |||||||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||| ||||||    
T  38928441 tttctaaactcttgtttcagccccctctatctcaag-gtttactctaatacaaagcctatatttatagtaaaag 38928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8631682 - 8631760
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||    ||||||| || ||||| |||||||||||||||| | ||||||    
T  8631682 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtgaaagta 8631760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37313329 - 37313400
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| |||||||||||| || ||||||| ||||| |||  ||||||||||| |||||    
T  37313329 tttctaaacccttgtttcagccccctctatctc-aaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 5101066 - 5100992
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||| ||||||||| ||||||||||||||  |||||| |||||  || ||||||||||||| |||||||||    
T  5101066 ttctaaacctttgtttcagtcccctctatctcaag-gtttaccctgattcaaggtctatatttatagtaaaagtat 5100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 16689333 - 16689380
Alignment:
Q  132 caccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    |||||||||||||||||||||   ||||||| ||||||||||||||||    
T  16689333 caccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 16689380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22132653 - 22132684
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctc 32  Q
    ||||||||||||||||||||||||||||||||    
T  22132653 tttctaaacccttgtttcagcccctctatctc 22132684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22134878 - 22134909
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctc 32  Q
    ||||||||||||||||||||||||||||||||    
T  22134878 tttctaaacccttgtttcagcccctctatctc 22134909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 47868471 - 47868397
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||||||| ||||||||| ||||||||| || |||| |||||||| || ||||||||||||| | ||||||    
T  47868471 tttctaaacccttctttcagccctctctatctccaa-gtttgctctgatacaaggtctatatttatagtgaaagta 47868397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 52942940 - 52943002
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactc 267  Q
    ||||||||||||||||   |||||||||||||| || |||| ||||||||||||||||||||||    
T  52942940 atcgtgccacgttgcccaaccatcgtgccacgatttttgca-aaacctgattttaagttaactc 52943002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16932052 - 16932125
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    ||||||||||||||| |||| |||||||||||| ||||||| || ||||| || || |||||||||| |||||||    
T  16932052 tttctaaacccttgtatcagccccctctatctc-aaagtttgctttgatacaaggtttatatttatagtaaaagt 16932125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18537733 - 18537806
Alignment:
Q  1 tttctaaacccttgttt-cagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||| ||||||| ||||||||||  ||||||||||||| ||  |||||||||||| ||||||    
T  18537733 tttctaaacccttgttttcagccccctctatctcaat-gtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 40999212 - 40999297
Alignment:
Q  3 tctaaacccttgttt-cagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt 88  Q
    ||||||||||||||| ||| | ||||| |||||  |||||||||||||||| || |||||||||| ||||| || | ||||||||||    
T  40999212 tctaaacccttgttttcagactctctacctcaag-gtttactctgatataaggtttatatttatagtaaaaataacccttaaaattt 40999297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41997562 - 41997497
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    ||||| ||| |||||||||||||| | ||||||||  ||||||||||||| ||||||||||||||||    
T  41997562 tttctgaacacttgtttcagccccctttatctcaag-gtttactctgatacaaagtctatatttata 41997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2485135 - 2485210
Alignment:
Q  1 tttctaaacccttgtttcagcccc--tctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||||||||||| ||||||  |||| |||||| |||| |||||||| || ||||||||||||| | ||||||    
T  2485135 tttctaaacccttgttttagcccccttctagctcaaa-gtttgctctgatacaaggtctatatttatagtgaaagta 2485210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 4884598 - 4884533
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||||| |  |||||||| ||||||||| ||||   |||||||||||||||||||||    
T  4884598 atcgtgacacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 4884533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 6764701 - 6764656
Alignment:
Q  225 catcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||    
T  6764701 catcgtggcacgattctccagaattctgattttaagttaactctca 6764656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 19322766 - 19322702
Alignment:
Q  2 ttctaaacccttgtttca-gcccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    ||||||||||||||||||  |||||||||||| || ||||||||||||| ||  ||||||||||||    
T  19322766 ttctaaacccttgtttcatccccctctatctc-aaggtttactctgatacaagatctatatttata 19322702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24348288 - 24348209
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||   ||||| || ||||||||||||| |||||||||    
T  24348288 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtat 24348209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 47868242 - 47868197
Alignment:
Q  225 catcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||    
T  47868242 catcgtggcacgattctccagaattctgattttaagttaactctca 47868197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 8631914 - 8631958
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||    
T  8631914 ccatcgtggcacgattctccagaattctgattttaagttaactct 8631958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 20302475 - 20302200
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||||||||||| || ||||||||||     ||||||    
T  20302475 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaacaaatat 20302377  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaaa 193  Q
    ||||  ||||||| ||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||    
T  20302376 gcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaaa 20302277  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  20302276 ctgaaacctccatcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaactctca 20302200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 13761853 - 13761579
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||||||| ||||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  13761853 tttctaaacccttgtttcagccctctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 13761755  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||||||||||||||||||| | |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||   |||||    
T  13761754 gcacccaaaaatacgtttctgttattcgccgccagcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaac 13761655  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13761654 tgaaacctccatcatgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctca 13761579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 51750055 - 51749780
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  51750055 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 51749957  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaaa 193  Q
    ||||  ||||||||||||||||||||||| | |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||    
T  51749956 gcacccaaaaatacgtttctgttattcgccgccagcgcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaa 51749857  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| |||||| ||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||    
T  51749856 ctgaaacctccatcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttgattttaagttaactctca 51749780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 51752381 - 51752106
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||| |||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  51752381 tttctaaactcttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 51752283  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaaa 193  Q
    ||||  |||||||||||| |||||||||| | |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||    
T  51752282 gcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgcctcaaaaaa 51752183  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  51752182 ctgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctca 51752106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 28840696 - 28840424
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    ||||||||||||||||||| |||| | ||||||  ||||||| |||||||| || ||||||||||||| |||||||||||||||||||||     ||||     
T  28840696 tttctaaacccttgtttcatccccctgtatctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 28840597  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||| | ||||    
T  28840596 tgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttgccta-aaaa 28840498  T
Q  194 ctaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaact 266  Q
    || |||||| | ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  28840497 ctgaaacctccaatcgtgccacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaact 28840424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 28842511 - 28842239
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    |||||||||||||||||||||||| ||||||||  ||||||| |||||||| || || |||||||||| |||||||||||||||||||||     ||||     
T  28842511 tttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatt 28842412  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||| ||||||| ||||||||| ||||||| |||  ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| | ||||    
T  28842411 tgcactcaaaaatatgtttctgtttttcgctgccaggacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgccta-aaaa 28842313  T
Q  194 ctaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaact 266  Q
    || |||||| | |||||||||||| |||||||||||||||||||||| || ||| | ||||||||||||||||||    
T  28842312 ctgaaacctccaatcgtgccacgtagccttgccatcgtgccacgattcctacag-atcctgattttaagttaact 28842239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 6823901 - 6823643
Alignment:
Q  1 tttctaaacccttgtttcagcccc--tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    ||||||||||||||||||||||||  ||||||||||| |||| |||||||| || ||||||||  ||| ||||||| |||||||||||||     ||||     
T  6823901 tttctaaacccttgtttcagcccccctctatctcaaa-gtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatc 6823803  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaa 192  Q
    |||||  |||||||||||| |||||||||| | |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || |||    
T  6823802 tgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgcctcaaaaa 6823703  T
Q  193 actaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctg 252  Q
    ||| |||||| |||||||||||||||||   ||||||||||| ||||||||| |||||||    
T  6823702 actgaaacctccatcgtgccacgttgcccaaccatcgtgccatgattctgcaaaaacctg 6823643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 10400094 - 10400367
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| ||||||||  | |||| |||||||| || |||||||||||||  |||||| |||||||||||||     |||| ||    
T  10400094 ttctaaacccttgtttcagccccctctatctccca-gtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctg 10400192  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  |||||||||||| ||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||| ||| ||  |||  |    
T  10400193 cacccaaaaatacgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttg-cctcaaactt 10400291  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | ||||||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||||||    
T  10400292 gaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctca 10400367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 16226032 - 16225891
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||   ||     
T  16226032 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccaaccg 16225933  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16225932 tcgtgccacgattctgcagaaacctgattttaagttaactct 16225891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 47179568 - 47179430
Alignment:
Q  132 caccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtg 231  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||  ||| |||||    
T  47179568 caccatcgtgccacgatgagaccccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtg 47179469  T
Q  232 ccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47179468 ccacgattctgcagaaacctgattttaagttaactctca 47179430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 15823562 - 15823288
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| | |||||| || ||||||| ||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  15823562 tttctaaacccttgtttcagccccctttatctctaa-gtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 15823464  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||   ||||||| |||||||||||| ||||  ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||  |||      
T  15823463 gcatccaaaaatatgtttctgttatttgctgctagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttg-cctcaaact 15823365  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  ||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  15823364 tgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattcctgcag-atcctgattttaagttaactctca 15823288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 47177222 - 47177080
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||  | |     
T  47177222 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtcttgccca-aaaactaaaacctccatcgtgccacgttgcccagtcg 47177124  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  47177123 tcgtgccacgattctgcagaaacctgattttaagttaactctca 47177080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 134 - 270
Target Start/End: Complemental strand, 23783376 - 23783240
Alignment:
Q  134 ccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgcc 233  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||  |||||||    
T  23783376 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgcc 23783277  T
Q  234 acgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| ||||||||||||||||||||||||||||||    
T  23783276 acgattgtgcagaaacctgattttaagttaactctca 23783240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 13215097 - 13214854
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  13215097 tttctaaacccttgtttcagccccctctatctcaaaa-tttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 13214999  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  |||||||||||| ||||||| |||| || | ||||||||||||||||||| | |||||| ||||||||    ||||||| |||| ||  |||||    
T  13214998 gcacccaaaaatacgtttttgttatttgctgccaacacaccatcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttg-cctcaaaac 13214900  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt 239  Q
    | |||||| | ||||||||||||||||   ||||||||||||||||    
T  13214899 tgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatt 13214854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 6822893 - 6822777
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcc-cagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 253  Q
    |||||||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  6822893 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 6822794  T
Q  254 ttttaagttaactctca 270  Q
    |||||||||||||||||    
T  6822793 ttttaagttaactctca 6822777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 28207331 - 28207500
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  28207331 tttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 28207429  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgcca 165  Q
    ||||  ||||| |||||| |||||||||| | |||| |||||||||||||||||| |||||||||||||||    
T  28207430 gcacccaaaaaaacgtttatgttattcgccgccagcgcaccatcgtgccacgttgtgaccccatcgtgcca 28207500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 30790658 - 30790848
Alignment:
Q  1 tttctaaacccttgttt-cagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    ||||||||| ||||||| |||| |||||||||||||  ||||||||||||| || ||||||||||||| |||||||||||||||||||||     ||||     
T  30790658 tttctaaactcttgttttcagctccctctatctcaag-gtttactctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatc 30790756  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc 185  Q
    ||||||||||||||||||| |||| ||| |   |||| |||||||||||||| |||||| |||||||||||||| ||||||||||| |||||    
T  30790757 tgcactgaaaaatacgtttatgtttttcccctccagcgcaccatcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgc 30790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 41646936 - 41646764
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  41646936 tttctaaacccttatttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 41646838  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacga 168  Q
    |||   ||||||| ||||||||||||||||| |||  ||||||||||||||||||| | |||| ||||||||||    
T  41646837 gcatccaaaaatatgtttctgttattcgctgccagtgcaccatcgtgccacgttgcaatcccaccgtgccacga 41646764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 47451659 - 47451508
Alignment:
Q  6 aaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcact 99  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||| ||||     |||| |||||     
T  47451659 aaacccttgtttaagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgcacc 47451561  T
Q  100 gaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcga 152  Q
     |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  47451560 aaaaaatacgtttctgttattcgctgtcagcgcaccatcgtgccacgatgcga 47451508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 3579881 - 3580154
Alignment:
Q  1 tttctaaacccttgtttcagcccc---tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaat 92  Q
    ||||| ||||||||||||||||||   |||||||||||  ||||| |||||| || ||||||||||| | |||||||||||||||||||||     ||||    
T  3579881 tttctgaacccttgtttcagccccccctctatctcaaat-tttacgctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaat 3579979  T
Q  93 atgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaa 192  Q
     ||||||  ||||||||||| || ||||||| | |||| ||||||||||||||||||| | |||| ||| |||||||||||||| || |||| ||  | |    
T  3579980 ttgcactctaaaatacgtttatgatattcgccgccagcgcaccatcgtgccacgttgcaatcccaccgtaccacgatttttccaatgacttg-cctcata 3580078  T
Q  193 actaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactc 267  Q
    ||| |||| | | || ||| ||||||||| ||| |||||||||||||| |||||  |||||||||||||||||||||    
T  3580079 actgaaacatccaattgtgtcacgttgccctgcaatcgtgccacgattcctgca-taacctgattttaagttaactc 3580154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 20291386 - 20291282
Alignment:
Q  167 gatttttccagtgccttgcc-cagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaac 265  Q
    ||||||||||||||| |||| || |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccaccgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaac 20291287  T
Q  266 tctca 270  Q
    |||||    
T  20291286 tctca 20291282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 39462535 - 39462260
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||| |||||||||||  |||||||||||| ||||||||||||| || ||||||||||||| | |||||||  ||||||||||     |||| |    
T  39462535 tttctaaacctttgtttcagccttctctatctcaaa-gtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatct 39462437  T
Q  95 gca-ctgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    ||| |  ||||||||||||||||||||| |||  ||| |||||||||||||| |||| | |||||||||||||||    |||| || |||| ||  ||||    
T  39462436 gcacccaaaaaatacgtttctgttattcactgcaagcgcaccatcgtgccacattgcaatcccatcgtgccacgaaaaatccactgacttg-cctcaaaa 39462338  T
Q  194 ctaaaacct-tcatcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| | ||||||||||||||||   |||| ||| ||||| |||||||| ||||||||||||||||||||||||    
T  39462337 ctgaaacctctaatcgtgccacgttgcccaaccattgtgtcacgatttctgcag-aacctgattttaagttaactctca 39462260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 16231458 - 16231368
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcag 245  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||  ||| |||||||||||||||||||    
T  16231458 ccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag 16231368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 38925743 - 38925892
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaatt-----taaatat 94  Q
    ||||| ||| |||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||     ||||| |    
T  38925743 tttctgaactcttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatct 38925841  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccac 145  Q
    ||||  ||||||||  ||||||| ||||||| || | | ||||||||||||    
T  38925842 gcacccaaaaatacacttctgttgttcgctgccaacgccccatcgtgccac 38925892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 28998519 - 28998593
Alignment:
Q  2 ttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||| |||||||||    
T  28998519 ttctaaacccttgtttcagcctcctctatctcaaa-gtttactctgattcaaagtctatatttatagtaaaagtat 28998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 29004235 - 29004309
Alignment:
Q  2 ttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||| |||||||||    
T  29004235 ttctaaacccttgtttcagcctcctctatctcaaa-gtttactctgattcaaagtctatatttatagtaaaagtat 29004309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 49687496 - 49687406
Alignment:
Q  61 tttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    |||||| |||||||||||||||||||||     |||| |||||  |||||||||||| ||||||||||||||||| |||||||||||||||    
T  49687496 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgtcagcgcaccatcgtgccacg 49687406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 14098239 - 14098380
Alignment:
Q  5 taaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt----aaatatgcact 99  Q
    |||||| ||||||||| ||||||||||||||| ||||| | ||||| || ||||||||||||| | |||||||  ||||||||||     ||| |||||     
T  14098239 taaaccattgtttcagtcccctctatctcaaa-gtttagtttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaatctgcacc 14098337  T
Q  100 gaaaaatacgtttctgttattcgctgtcagcccaccatcgtgc 142  Q
     |||||||||||| |||||||||||| |||| |||||||||||    
T  14098338 caaaaatacgtttatgttattcgctgccagcgcaccatcgtgc 14098380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 49495468 - 49495540
Alignment:
Q  5 taaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||||||||    
T  49495468 taaacccttgtttcagccccctctatctcaag-gtttactctgatacaaagtctatatttatagtaaaagtatc 49495540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 6823031 - 6822904
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||  ||| ||||||| |||||||||||||     |||| |    
T  6823031 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatct 6822933  T
Q  95 gcactgaaaaatacgtttctgttattcgc 123  Q
    ||||  |||||||| ||||| ||||||||    
T  6822932 gcacccaaaaatacatttctattattcgc 6822904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20291473 - 20291390
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaa 84  Q
    ||||||||||||||||||| | ||||||||||||||| ||| |||| ||| || ||||||||||||| ||||||| |||||||||    
T  20291473 tttctaaacccttgtttcatctccctctatctcaaaa-tttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaa 20291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25251540 - 25251611
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||| ||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||| |||||    
T  25251540 tttctaaacctttgtttcagccccctctatctcaag-gtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25248779 - 25248841
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatattt 63  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||||||||    
T  25248779 tttctaaacccttgtttcagccccctctatctc-aaggtttactctgatacaaagtctatattt 25248841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2617532 - 2617467
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||| || |||||||||||||    
T  2617532 tttctaaacccttgtttcagcctcctctatctc-aaagtttgctctgatacaaggtctatatttata 2617467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16226183 - 16226098
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    ||||||||||||||||| || ||||||||||||||| |||| || ||||| || ||||||||||||| ||||||| | |||||||||    
T  16226183 tttctaaacccttgttttagacccctctatctcaaa-gtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaat 16226098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16231617 - 16231532
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||| ||||||||||||||||| ||||||||||| |||| || ||||| || ||||||||||||| ||||||| | |||||||||    
T  16231617 tttctagacccttgtttcagccccctctatctcaaa-gtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaat 16231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16428669 - 16428588
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgctta 82  Q
    |||||||||||||||||||||||| ||||||| ||  |||| ||||||||||||  ||||||||||| |||||||||| ||||    
T  16428669 tttctaaacccttgtttcagccccctctatct-aatggtttgctctgatataaaacctatatttatagtaaaagtatccctta 16428588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17324081 - 17324009
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||| ||||||||||| ||||| |||||||||||  ||||||||| ||| |||||||||||||||||||||||    
T  17324081 tttctgaacccttgttttagccctctctatctcaag-gtttactctaatacaaagtctatatttataataaaag 17324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6995965 - 6996040
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||| ||||||| ||||| |||||||||| | |||||||||||  || |||||||||||||||||||||||    
T  6995965 tttctaaaccgttgtttcggccccctctatctcaaga-tttactctgattcaaggtctatatttataataaaagtat 6996040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 14183852 - 14183923
Alignment:
Q  2 ttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||| |  ||||||||||||| ||||||    
T  14183852 ttctaaacccttgtttcagccctctctatctc-aaggtttactctgatacatggtctatatttatagtaaaag 14183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 18800835 - 18800910
Alignment:
Q  2 ttctaaacccttgtttcagcccctc-tatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||| ||||||||||||||  ||||||||  ||||||||||||| || ||||||||||||| ||||||||||    
T  18800835 ttctaaacctttgtttcagccccttgtatctcaag-gtttactctgatacaaggtctatatttatagtaaaagtatc 18800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18307125 - 18307060
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || |||||||||||||    
T  18307125 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttata 18307060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 38925931 - 38925996
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||  |||||||| |||||||| |||| ||| ||||||||||||||||||||||    
T  38925931 atcgtgccacgttgcccagccatcgtaccacgatttctgcggaa-cctgattttaagttaactctca 38925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11457740 - 11457812
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||| ||||||||||||| ||||||||||  |||||| |||||| || ||||||||||||| ||||||    
T  11457740 tttctaaaccattgtttcagccccctctatctcaag-gtttacactgatacaatgtctatatttatagtaaaag 11457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17186393 - 17186465
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||| |||||||||| ||||||||||  |||| |||||||| ||| |||||||||||| ||||||    
T  17186393 tttctaaacccttatttcagccccctctatctcaag-gtttgctctgatacaaaatctatatttatattaaaag 17186465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31423139 - 31423215
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || |  |||||||||| ||||||||||    
T  31423139 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgcttatatttatagtaaaagtatc 31423215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31735786 - 31735865
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||| |||||| |||||||||   ||||||||  |||||| || ||||||||||||| |||||||||    
T  31735786 tttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 31735865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50079086 - 50079158
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| || ||| || ||||||||||||| ||||||    
T  50079086 tttctaaacccttgtttcagccccctctatctc-aaggtttacactaatacaatgtctatatttatagtaaaag 50079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17318909 - 17318838
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| |||||||||||| || ||||||| ||||| |||  ||||||||||| |||||    
T  17318909 tttctaaacccttgtttcagccccctctatctc-aaggtttactatgatacaaaacctatatttatagtaaaa 17318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 42922249 - 42922174
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||| ||||| |||| ||||||| ||  ||||||||||||| ||| |||||||||||| ||||||||||    
T  42922249 ttctaaacccttatttcaaccccctctatcttaag-gtttactctgatacaaaatctatatttatagtaaaagtatc 42922174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 14098442 - 14098508
Alignment:
Q  204 catcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||| |||   ||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  14098442 catcgtgccacggtgctcagccatcgtgccacgatttctgcagaatc-tgattttaagttaactctca 14098508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47177378 - 47177301
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    |||||||||||||||||||| ||||||||||||    ||||||| || ||||| || ||||||||||||| |||||||    
T  47177378 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 47177301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47179729 - 47179652
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    |||||||||||||||||||| ||||||||||||    ||||||| || ||||| || ||||||||||||| |||||||    
T  47179729 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 47179652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 2617328 - 2617282
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  2617328 ccatcgtggcacgattctccagaattctgattttaagttaactctca 2617282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 40133936 - 40133879
Alignment:
Q  15 tttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||| |||||||| | |||||||||||| |||| ||||||||||| ||||||    
T  40133936 tttcagcccctatatctcaaga-tttactctgatacaaagcctatatttatagtaaaag 40133879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43104177 - 43104099
Alignment:
Q  1 tttctaaacccttgttt-cagcccctctatctcaaaag-tttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||| |||||| ||| | ||||| |||| ||| |||||||||||| || ||||||||||||| ||||||||||    
T  43104177 tttctaaaccattgttttcagactctctacctcacaaggtttactctgatacaaggtctatatttatagtaaaagtatc 43104099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 47451472 - 47451407
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||| |||||  ||||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  47451472 atcgtgccacattgcccagccatcgtgccacgatttctgca-aaatctgatttgaagttaactctca 47451407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 2510593 - 2510668
Alignment:
Q  5 taaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  2510593 taaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 2510668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9241351 - 9241425
Alignment:
Q  1 tttctaaacccttgtttcagcccc--tctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||| |||||||||||||  ||||||| ||  ||||||||||||| |||| ||||||||||| ||||||||    
T  9241351 tttctaaacc-ttgtttcagcccccctctatcttaag-gtttactctgatacaaagcctatatttatagtaaaagta 9241425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 25133748 - 25133683
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||||| |  |||||||| |||| |||| ||||  ||||||||||||||||||||||    
T  25133748 atcgtggcacgttgcttctccatcgtgacacgtttctccagattcctgattttaagttaactctca 25133683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 26520404 - 26520448
Alignment:
Q  21 cccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||    
T  26520404 cccctctatctcaag-gtttactctgatacaaagtctatatttata 26520448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 27337203 - 27337282
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  || ||| || ||||||||||||| |||||||||    
T  27337203 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtat 27337282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31489931 - 31489859
Alignment:
Q  1 tttctaaacccttgtttc-agcccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||| | |||||||||||| || |||||| || ||| || ||||||||||||| ||||||    
T  31489931 tttctaaacccttgtttcaaccccctctatctc-aaggtttacactaatacaatgtctatatttatagtaaaag 31489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50076937 - 50077009
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||| |||||||||||||| | |||||||||  |||||| |||||| || ||||||||||||| ||||||    
T  50076937 tttctaaatccttgtttcagccctttctatctcaag-gtttacactgatacaatgtctatatttatagtaaaag 50077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 50248841 - 50248909
Alignment:
Q  5 taaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||| |||||||||| |||||||||||||  |||||| |||||| || ||||||||||||| ||||||    
T  50248841 taaacctttgtttcagctccctctatctcaag-gtttacactgatacaatgtctatatttatagtaaaag 50248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 13127895 - 13127958
Alignment:
Q  2 ttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||| ||||||| ||| ||| |||||||| |||| || || ||||||||||    
T  13127895 ttctaaacccttgtttcaacccctctctct-aaaggtttactccgatacaaggtttatatttata 13127958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21948452 - 21948526
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||| ||||||||||||    |||||||| | ||||| || ||||||||||||| ||||    
T  21948452 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaa 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39932089 - 39932017
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc-aaaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||| ||||||||||||  |||||||  ||| ||| || ||||||||||||| ||||    
T  39932089 tttctaaacccttgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 9e-76; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 22114566 - 22114840
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||||||||| ||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  22114566 tttctaaacccttgtttcagccccttctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 22114664  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||||||||||||||||||| | || | ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||   |||||    
T  22114665 gcacccaaaaatacgtttctgttattcgccgccatcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaac 22114764  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| |||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||    
T  22114765 tgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaactctca 22114840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 18099432 - 18099705
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||| || ||||||||| ||| ||||||| |||||||||||||     |||| ||    
T  18099432 ttctaaacccttgtttcagccccctctatctctcaagtttactctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttggaacaaatctg 18099530  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  |||||||||||||| || ||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||  ||||||    
T  18099531 cacccaaaaatacgtttctattgttcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttg-cctcaaaact 18099629  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18099630 gaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctca 18099705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 1321437 - 1321163
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||     |||| |    
T  1321437 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 1321339  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||  |||      
T  1321338 gcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttg-cctcaaact 1321240  T
Q  195 taaaacct-tcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  || |||||||||||||| |||||| | | ||||||||||||||||||||    
T  1321239 tgaaacctctaatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctca 1321163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 5191649 - 5191375
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| ||  |||| || ||||||||||||| ||||||| || ||||||||||     |||| |    
T  5191649 tttctaaacccttgtttcagccccctctatctccaa-gtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatct 5191551  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| || || ||||||||||||||||||||||||| ||||| ||  |||||    
T  5191550 gcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttg-cctcaaaac 5191452  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||| ||||  || ||||||||||||||||||||||| |||||||||||||||||||||    
T  5191451 tgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctgattttaagttaactctca 5191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 6063865 - 6064004
Alignment:
Q  131 ccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgt 230  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  6063865 ccaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctccattgtgccacgttgccttgccatcgt 6063964  T
Q  231 gccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  6063965 gccacgattctgcataaacctgattttaagttaattctca 6064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 38210212 - 38210069
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||     
T  38210212 cagcgcactatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 38210113  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38210112 tcgtgccacgattctgcagaaacctgattttaagttaactctca 38210069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 50493821 - 50493678
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  || |    
T  50493821 cagcgcaccatcgtgccacgatgagactccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcta 50493722  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  50493721 tcgtgccacgattctgcagaaacctgattttaagttaactctca 50493678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 32264300 - 32264578
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaa---agtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaa 91  Q
    ||||||||||||||||| |||||| |||||||||||   | |||||||||||| || ||||||||||||| |||||||||||||||||||||     |||    
T  32264300 tttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaa 32264399  T
Q  92 tatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaa 191  Q
    | |||||  ||||||| ||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||    ||||||| ||||||   ||    
T  32264400 tctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgcctcaaa 32264499  T
Q  192 aactaaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    |||| |||||| | ||||||||||||| ||  ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  32264500 aactgaaacctccaatcgtgccacgtt-cccagccatcgtgccacgatttctgca-aaacctgattttaagttaactctca 32264578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 53896614 - 53896752
Alignment:
Q  132 caccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtg 231  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||  || ||||||    
T  53896614 caccatcgtgccacgatgagaccccatcgtgccacgatttttccagtaccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcaatcgtg 53896713  T
Q  232 ccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  53896714 ccacgattctgcagaaacctgattttaagttaactctca 53896752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 26720544 - 26720270
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||| |||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |    
T  26720544 tttctaaacccttatttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatct 26720446  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||  |||      
T  26720445 gcactaaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaact 26720347  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||| |||||||||||   ||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  26720346 tgaaacctccaatcctgccacgttgctcagccatcgtgccacgattcctgcag-atcctgattttaagttaactctca 26720270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 10956289 - 10956561
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| |||||||  |  ||||||||||||| || ||||||||||||| |||||  || |||||||||||     |||| ||    
T  10956289 ttctaaacccttgtttcagccccctctatcttcat-gtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctg 10956387  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  |||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||    
T  10956388 cacctaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaact 10956486  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | ||||||||| | || |  ||||| ||||||||||| |||||| | ||||||||||||||||||||||    
T  10956487 gaaacctccaatcgtgccatgatgtccagccat-gtgccacgattcctgcag-atcctgattttaagttaactctca 10956561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 5522876 - 5523150
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  5522876 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatct 5522974  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||| ||  |||||    
T  5522975 gcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttg-cctcaaaac 5523073  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||  | ||||||||| ||||||  || ||| |||||||||| || ||| | | ||||||||||||||||||||    
T  5523074 tgaaaccaccaatcgtgccatgttgcccagcaatcttgccacgattcctccag-atcttgattttaagttaactctca 5523150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 45882935 - 45882752
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  45882935 tttctaaacccttgtttcagccccctctatctcata-gtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatct 45882837  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    ||||  ||||||| |||||||||||||| ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  45882836 gcacccaaaaataggtttctgttattcgttgtcagcgcaccatcgtgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 18097162 - 18097420
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    |||||||||||||||| |||||| ||||||||  ||||||||| ||||| || ||||||||||||| ||||||| |||||||||||||     |||| ||    
T  18097162 ttctaaacccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctg 18097261  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  ||||||||||||||||||||||| |                ||||  ||||||||||||||||||||||||||||  |||||||||   ||||||    
T  18097262 cacccaaaaatacgtttctgttattcgccg----------------ccactatgcgaccccatcgtgccacgatttttcctatgccttgcctc-aaaact 18097344  T
Q  196 aaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
     |||||| || |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18097345 gaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctca 18097420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 10958585 - 10958767
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    ||||||||||||||||||||||| |||||||  |  ||||||||||||| || ||||||||||||| |||||  || |||||||||||     |||| ||    
T  10958585 ttctaaacccttgtttcagccccctctatctttat-gtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctg 10958683  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    |||  |||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10958684 cacctaaaaatacgtttctgttattggctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 10958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 35777280 - 35777165
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||  |||||||||||||||||||||| || ||    
T  35777280 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctgtcgtgccacgattctgcagaaatctaat 35777181  T
Q  255 tttaagttaactctca 270  Q
    ||||||||||||||||    
T  35777180 tttaagttaactctca 35777165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 5899604 - 5899459
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||| | ||||||||||||||||| | | |    
T  5899604 cagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgccttgcctaaaaaactaaaacatccatcgtgccacgttgcccttcaa 5899505  T
Q  227 tcgtgccacgattctgcagaaacctgatttta--agttaactctca 270  Q
    |||||||| |||| ||||||||||||||| ||  ||||||||||||    
T  5899504 tcgtgccatgattatgcagaaacctgattataagagttaactctca 5899459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 38889875 - 38889759
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcag-aaacctga 253  Q
    |||||||||||||||||||||| ||||||||| | |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| |    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtaccacgattctgcagaaaacctaa 38889776  T
Q  254 ttttaagttaactctca 270  Q
    |||||||||||||||||    
T  38889775 ttttaagttaactctca 38889759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 5886129 - 5885985
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacg-ttgccttgcc 225  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||||| | |||||||||||| ||||  | |     
T  5886129 cagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatttttccagtaccttgcctaaaaaactaaaacatccatcgtgccacgtttgcgcttca 5886030  T
Q  226 atcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||    
T  5886029 atcgtgccacgattctgtaaaaacctaattttaagttaactctca 5885985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 3859524 - 3859350
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  3859524 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatct 3859426  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatt 170  Q
    ||||  |||||||||||| | |||||||| | |||| ||||||||||||||| || ||||||||||||||||||||    
T  3859425 gcacccaaaaatacgtttatattattcgccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 10192401 - 10192525
Alignment:
Q  143 cacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctg 242  Q
    |||| ||||| |||||||||||||||||||||||||||||||||   |||||| |||||| ||||||||||||||||||||| ||||||||||||||| |    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttgcctc-aaaactgaaacctccatcgtgccacgttgccttgcgatcgtgccacgattccg 10192499  T
Q  243 cagaaacctgattttaagttaactct 268  Q
    || ||| |||||||| ||||||||||    
T  10192500 cataaatctgattttcagttaactct 10192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 25388742 - 25388654
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacg 215  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  25388742 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacg 25388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 10085492 - 10085605
Alignment:
Q  154 cccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 253  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||| ||||||||||||||||||||| ||| ||||||||||| ||| ||| ||||    
T  10085492 cccatcgtgccacgatttttccagtgccttgcctc-aaaactgaaacctccatcgtgccacgttgccttgcgatcatgccacgattccgcataaatctga 10085590  T
Q  254 ttttaagttaactct 268  Q
    |||| ||||||||||    
T  10085591 ttttcagttaactct 10085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11163146 - 11162997
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||  ||||||| |||||||||||||     |||| |    
T  11163146 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatct 11163048  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccac 145  Q
    ||||  ||||||||||||||||||||||| | |||| ||||||||||||||    
T  11163047 gcacccaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccac 11162997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 37 - 270
Target Start/End: Complemental strand, 24177239 - 24177001
Alignment:
Q  37 gtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtcagcc 131  Q
    ||||||| ||||| || |||||||||||||||||||||||| ||||||||||     |||| |||||| |||||||||||| |||| |||||   || |     
T  24177239 gtttactatgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgcacttaaaaatacgtttatgtttttcgcctccaacg 24177140  T
Q  132 caccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc-ccagaaaactaaaaccttc-atcgtgccacgttgccttgccatcg 229  Q
    |||||||||||||| |||||| |||||||||||||  ||||||||||| |||||  |||  |||| ||||   | |||||||||||||||| ||| | ||    
T  24177139 caccatcgtgccacattgcgatcccatcgtgccacattttttccagtgacttgcttcag--aactgaaacaaccaatcgtgccacgttgccctgcaaacg 24177042  T
Q  230 tgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| |||| ||| ||| ||||||||||||||||||||    
T  24177041 tgccacgatttctccag-aacttgattttaagttaactctca 24177001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18162659 - 18162510
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactc-tgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||| ||| |||||||| || |||||||| ||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  18162659 tttctaaacccttgtttcatccc-tctatctccaa-gtttactcatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 18162562  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  ||||||||||||||||||||||||| |||| |||||||||| ||||    
T  18162561 gcacccaaaaatacgtttctgttattcgctgccagcgcaccatcgtggcacg 18162510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 7606881 - 7606961
Alignment:
Q  190 aaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7606881 aaaactgaaacctccatcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctca 7606961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11170400 - 11170250
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  11170400 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 11170302  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  ||||||| ||||||||||||||| | |||| ||| |||| ||||||    
T  11170301 gcacccaaaaatatgtttctgttattcgccgccagcgcacaatcgagccacg 11170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12268227 - 12268348
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||  |||||||||||| |||||||||||||||||||||     |||| |    
T  12268227 tttctaaactcttgtttcagctccctctatctcaaa-gtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaattt 12268325  T
Q  95 gcactgaaaaatacgtttctgtt 117  Q
    |||||||||||||||| ||||||    
T  12268326 gcactgaaaaatacgtctctgtt 12268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10084650 - 10084804
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaa 91  Q
    |||||||||||||||| ||||||| ||||||||    ||||||| ||| |||| || ||||||||||||| |||||| ||||||||||||||     |||    
T  10084650 tttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaa 10084749  T
Q  92 tatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    | |||||| ||||||| ||||||||| ||||||| |||| |||||||||||||||    
T  10084750 tctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacg 10084804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10191570 - 10191724
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaa 91  Q
    |||||||||||||||| ||||||| | ||||||    ||||||| ||| |||| || ||||||||||||| |||||||||||||||||||||     |||    
T  10191570 tttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaa 10191669  T
Q  92 tatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    | |||||| ||||||| ||||||||| ||||||| |||| |||||||||||||||    
T  10191670 tttgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacg 10191724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 11163008 - 11162893
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctga 253  Q
    |||||||||||| |||||||||||||||||||   |||||| |||||| |||||||||||||||||  || |||||||||||||| |||||| | | |||    
T  11163008 ccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttga 11162910  T
Q  254 ttttaagttaactctca 270  Q
    |||||||||||||||||    
T  11162909 ttttaagttaactctca 11162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 15780855 - 15780769
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt 88  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||| || ||||||||||||| |||||||||||||||||||||    
T  15780855 ttctaaacccttgtttcagccccctctatctccaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaattt 15780769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 32219091 - 32218941
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||| |||||||||||||||||| ||||||||||| ||||| || |||| || ||||||||||||| | |||||||  ||||||||||     |||| |    
T  32219091 tttctgaacccttgtttcagccccctctatctcaaa-gtttagtcagatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatct 32218993  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  |||||||||||||| |||||||||| |||| |||||||||||||||    
T  32218992 gcacccaaaaatacgtttctcttattcgctgccagcgcaccatcgtgccacg 32218941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 48361940 - 48362081
Alignment:
Q  10 ccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaa 103  Q
    ||||||||||||||| | ||||||||| ||||||| ||||| || ||||||||||||| |||||||||||||||||||||     |||| ||||   |||    
T  48361940 ccttgtttcagccccctgtatctcaaa-gtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaa 48362038  T
Q  104 aatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    |||||||||||| ||||||||| |||| ||||||| |||||||    
T  48362039 aatacgtttctgctattcgctgccagcgcaccatcatgccacg 48362081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 6719532 - 6719649
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaacct-tc--atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacct 251  Q
    |||||||||||||||||||||||||| ||||| | |||||| |||||| ||  ||||||||||| |||| | | ||||||||||||||  ||||||||||    
T  6719532 ccatcgtgccacgatttttccagtgcattgccta-aaaactgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgattaagcagaaacct 6719630  T
Q  252 gattttaagttaactctca 270  Q
    ||||||||||||| |||||    
T  6719631 gattttaagttaattctca 6719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24979703 - 24979553
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || || |||||||||| | |||||||  ||||||||||     |||| |    
T  24979703 tttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatct 24979605  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  ||||||| |||| |||||||||||  ||||  ||||||||||||||    
T  24979604 gcaccaaaaaatatgtttatgttattcgctaccagcgtaccatcgtgccacg 24979553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 6066195 - 6066254
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccac 214  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  6066195 ccatcgtgccacgatgtttccagtgccttgcccaaaaaactaaaacctccatcgtgccac 6066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 11170260 - 11170147
Alignment:
Q  157 atcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgatt 255  Q
    |||| |||||||||||||||||||||||||   |||||  |||||| |||||||||||||||||  || | |||||||||||| |||||| | | |||||    
T  11170260 atcgagccacgatttttccagtgccttgcctcaaaaaccgaaacctccatcgtgccacgttgcccagcaaccgtgccacgattcctgcag-atcttgatt 11170162  T
Q  256 ttaagttaactctca 270  Q
    |||||||||||||||    
T  11170161 ttaagttaactctca 11170147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 25388666 - 25388620
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25388666 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 25388620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 53597232 - 53597161
Alignment:
Q  5 taaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| || ||||||||||||| ||||||||||    
T  53597232 taaacccttgtttcatcccctctatctcaag-gtttactctgatacaaggtctatatttatagtaaaagtatc 53597161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 3859365 - 3859319
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  3859365 ccatcgtgccacgattatgcagaaacctgattttaagttaactctca 3859319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 6066243 - 6066289
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  6066243 ccatcgtgccacaattctgcagaaacctgattttaagttaactctca 6066289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35777417 - 35777332
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||||||||||||||||||| ||||||||||| |||| || ||||| || ||||||||||||| ||||||| | |||||||||    
T  35777417 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaat 35777332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28761689 - 28761765
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||  |||||||||||||||| ||||||||||    
T  28761689 tttctaaacccttgtttcaaccccctctatctcaag-gtttactctgatgcaaagtctatatttatagtaaaagtatc 28761765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23633455 - 23633380
Alignment:
Q  2 ttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||| |||||||| ||||| |||||||||||  ||||||||||||| |||||||||||||||| ||||||||||    
T  23633455 ttctaaatccttgttttagccctctctatctcaag-gtttactctgatacaaagtctatatttatagtaaaagtatc 23633380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4308542 - 4308616
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  4308542 tttctaaacccttgtttcagccccctctatctc-aaagtttgctctgatacaaggtctatatttatagtgaaagta 4308616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6063707 - 6063794
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || ||||| || ||||||||||||| ||||||| | |||||||||    
T  6063707 tttctaaacccttgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaat 6063794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6561806 - 6561741
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| || |||||||||||||    
T  6561806 tttctaaacccttgtttcagccccctctatctc-aaggtttactctgatacaaggtctatatttata 6561741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1626944 - 1627016
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  1626944 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 1627016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6066057 - 6066131
Alignment:
Q  1 tttctaaacccttgtttcag--cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    ||||||||||||||||||||  |||||||||||| ||||||| || ||||| || ||||||||||||| |||||||    
T  6066057 tttctaaacccttgtttcagcccccctctatctc-aaagtttgctttgatacaaggtctatatttatagtaaaagt 6066131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23637022 - 23636947
Alignment:
Q  2 ttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||| |||| ||||||||||||  ||||||||||||| ||||| |||||||||| ||||| ||||    
T  23637022 ttctaaacccttgttttagcctcctctatctcaag-gtttactctgatacaaagtatatatttatattaaaattatc 23636947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 39715463 - 39715392
Alignment:
Q  3 tctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||||| |||||||||||||||||| || |||||| |||||| || |||||||||||||  |||||||    
T  39715463 tctaaacccttatttcagcccctctatctc-aaggtttacactgatacaatgtctatatttatagcaaaagta 39715392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35918210 - 35918284
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| |||||||||||||||| ||| || ||||| || ||||||||||||| | ||||||    
T  35918210 tttctaaacccttgtttcagccccctctatctcaaaa-tttgctatgatacaaggtctatatttatagtgaaagta 35918284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43226082 - 43226008
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| || ||||||||||||| | ||||||    
T  43226082 tttctaaacccttgtttcagccccctctatctc-caagtttgctctgatacaatgtctatatttatagtgaaagta 43226008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51727267 - 51727341
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||| |||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  51727267 tttctaaacccttgtttcagccccctttatctc-aaagtttgctctgatacaaggtctatatttatagtgaaagta 51727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 32218903 - 32218838
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  32218903 atcgtgccacgttgcccaatcatcgtgccacgatttctgcagaa-cctgattttaagttaactctca 32218838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 48362119 - 48362184
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||   |||||||||||||||| || ||||| ||||||||||||||||||||||    
T  48362119 atcgtgccacgttgcccaaccatcgtgccacgatttctacagaa-cctgattttaagttaactctca 48362184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4104156 - 4104235
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  4104156 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 4104235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5927025 - 5927097
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||||||| ||||||||| || |||||| | |||| || ||||||||||||| ||||||    
T  5927025 tttctaaacccttgtttcagccctctctatctc-aaggtttacaccgatacaatgtctatatttatagtaaaag 5927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28137556 - 28137628
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| || |  |||||||||| ||||||    
T  28137556 tttctaaacccttgtttcagccccctctatctc-aaggtttactctgatacaacgcatatatttatagtaaaag 28137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47701856 - 47701928
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| ||||| |||||| || |||||| |||||| || ||||||||||||| ||||||    
T  47701856 tttctaaacccttgtttcagccccctttatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 47701928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 53915760 - 53915832
Alignment:
Q  4 ctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||| ||||||| ||  ||||||||||||  || ||||||||||||| |||||||||    
T  53915760 ctaaacccttgtttcagccccctctatcttaag-gtttactctgattcaaggtctatatttatagtaaaagtat 53915832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 880714 - 880785
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||| |||||||||| ||||||||||||||  |||||| |||||| || ||||||||||||| ||||||    
T  880714 ttctaaactcttgtttcagacccctctatctcaag-gtttacactgatacaatgtctatatttatagtaaaag 880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6231445 - 6231374
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||| |||||||||||||| ||||||||||| | ||||| |||||| || ||||||||||||| |||||    
T  6231445 tttctaaatccttgtttcagcccgctctatctcaaga-tttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43421676 - 43421747
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    ||||||||||||||||||| |||| |||||||| || |||||| |||||| || ||||||||||||| |||||    
T  43421676 tttctaaacccttgtttcaaccccttctatctc-aaggtttacactgatacaatgtctatatttatagtaaaa 43421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51675016 - 51675087
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| |||||||||||| || ||||||  ||||| || ||||||||||||| |||||    
T  51675016 tttctaaacccttgtttcagccccctctatctc-aacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 51943367 - 51943292
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||| |||||||||| ||||||||||| |  ||||||||||||  || ||||||||||||| |||||||||    
T  51943367 tttctaaacctttgtttcagcaccctctatctccag-gtttactctgattcaaggtctatatttatagtaaaagtat 51943292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 53468717 - 53468788
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||| ||||| ||||| ||| |||||| |||||| || ||||||||||||| ||||||    
T  53468717 ttctaaacccttgtttcagccccctttatct-aaaggtttacactgatacaatgtctatatttatagtaaaag 53468788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54691835 - 54691906
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||| |||||||| | ||||||||||| ||  ||||||||||||| |||| ||||||||||| ||||||    
T  54691835 tttctaaaaccttgttttaccccctctatcttaag-gtttactctgatacaaagcctatatttatagtaaaag 54691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 1313397 - 1313331
Alignment:
Q  10 ccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||| ||||||||||  ||||||||||||  || ||||||||||||| |||||||||    
T  1313397 ccttgtttcagccccctctatctcaag-gtttactctgattcaaggtctatatttatagtaaaagtat 1313331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43228287 - 43228213
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||| |||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| | ||||||    
T  43228287 tttctaaactcttgtttcagccccctctatctccaa-gtttgctctgatacaatgtctatatttatagtgaaagta 43228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 5858245 - 5858199
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  5858245 ccatcgtggcacgattctccagattcctgattttaagttaactctca 5858199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27101749 - 27101795
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  27101749 ccatcgtggcacgattctccagaattctgattttaagttaactctca 27101795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 43225875 - 43225829
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  43225875 ccatcgtggcacgattctccagaattctgattttaagttaactctca 43225829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 51727495 - 51727541
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  51727495 ccatcgtggcacgattctccagaattctgattttaagttaactctca 51727541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3314680 - 3314608
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||| |||||| |||||||||||| || |||||| |||||| ||  |||||||||||| ||||||    
T  3314680 tttctaaacccttatttcagccccctctatctc-aaggtttacactgatacaatatctatatttatagtaaaag 3314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 4308771 - 4308816
Alignment:
Q  225 catcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||    
T  4308771 catcgtggcacgattctccagaattctgattttaagttaactctca 4308816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 6719499 - 6719544
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||||| ||||||||||||||| | |||| |||||||||||||||    
T  6719499 aaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacg 6719544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 10949743 - 10949808
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||||| |  |||||||| |||| |||| ||||  ||||||||||||||||||||||    
T  10949743 atcgtggcacgttgcttctccatcgtggcacgtttctccagattcctgattttaagttaactctca 10949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 20031742 - 20031787
Alignment:
Q  134 ccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    ||||||||||||||| |||  |||||||| ||||||||||||||||    
T  20031742 ccatcgtgccacgttacgattccatcgtggcacgatttttccagtg 20031787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 27762490 - 27762555
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||||| |  |||||||| |||| |||| ||||  ||||||||||||||||||||||    
T  27762490 atcgtggcacgttgcttctccatcgtggcacgtttcttcagattcctgattttaagttaactctca 27762555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28100302 - 28100374
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || | ||||||||||| || |  |||||||||| ||||||    
T  28100302 tttctaaacccttgtttcagccccctctatctc-aagggttactctgatacaacgcttatatttatagtaaaag 28100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43423724 - 43423796
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| ||||||| |||| || ||||||  ||||| || ||||||||||||| ||||||    
T  43423724 tttctaaacccttgtttcagccccctctttctc-aaggtttacagtgatacaatgtctatatttatagtaaaag 43423796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53591191 - 53591119
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||| |||||||||||| |||||||||| || |||||| || ||| || ||||||||||||| ||||||    
T  53591191 tttctaaactcttgtttcagcctcctctatctc-aaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 890033 - 890104
Alignment:
Q  2 ttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||||  |||||||||| || |||||| |||||| ||  |||||||||||| ||||||    
T  890033 ttctaaacccttgtttcagcttcctctatctc-aaggtttacactgatacaatatctatatttatagtaaaag 890104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3306795 - 3306724
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| ||||| ||||||  | |||||| |||||| || ||||||||||||| |||||    
T  3306795 tttctaaacccttgtttcagccccctatatctc-taggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 5886240 - 5886196
Alignment:
Q  42 ctctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||| || ||||||||||||| ||||||| |||||||||||    
T  5886240 ctctgataaaaggtctatatttatagtaaaagtttcgcttaaaat 5886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 5899715 - 5899671
Alignment:
Q  42 ctctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||| || ||||||||||||| ||||||| |||||||||||    
T  5899715 ctctgataaaaggtctatatttatagtaaaagtctcgcttaaaat 5899671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 6719405 - 6719457
Alignment:
Q  34 aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    ||||||| |||||||| || ||||||||||||| ||||||| | |||||||||    
T  6719405 aaagtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaat 6719457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 11079309 - 11079257
Alignment:
Q  133 accatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc 185  Q
    |||||||||||||||| |||  |||||||| ||||| |||||||||| |||||    
T  11079309 accatcgtgccacgttacgattccatcgtggcacgaattttccagtgacttgc 11079257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 9e-76; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 19504608 - 19504878
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| || ||||||||||     |||| |    
T  19504608 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatct 19504706  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||  ||||||||||||||  | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||     
T  19504707 gcacctaaaaatgtgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaat 19504806  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaact 266  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  19504807 taaaacctccatcgtgccacgttgccttgccatcgtgccatgattctgctgaaacctgattttaagttaact 19504878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 24162475 - 24162750
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  24162475 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatct 24162573  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaaa 193  Q
    ||||  ||||||||||||||  ||||||| | |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||    
T  24162574 gcacccaaaaatacgtttctaatattcgcagccagcgcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaa 24162673  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| |||||||||||||||||   |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  24162674 ctgaaacctccatcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttgattttaagttaactctca 24162750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 19502274 - 19502544
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||| |||||||||||||| | |||||| || |||| |||||||| || ||||||||||||| ||||| | || ||||||||||     |||| |    
T  19502274 tttctaaactcttgtttcagccccctttatctccaa-gtttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggatcaaatct 19502372  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||   ||||||| ||||||||||||||  | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||    
T  19502373 gcaaccaaaaatatgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaac 19502472  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaact 266  Q
    | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19502473 tgaaacctccatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaact 19502544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 27104791 - 27104519
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||| |||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  27104791 tttctgaacccttgtttcagccccctctatctcaaa-gttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 27104693  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| |||| |||| ||| ||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||   |||||    
T  27104692 gcactcaaaaatatgtttatgtttttccctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaac 27104593  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    | |||||| ||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||||||||||    
T  27104592 tgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctgattttaagttaactct 27104519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 21520956 - 21521232
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    |||||||||||||||||||||||| ||||||||  |||||||| ||||||| || || |||||||||| ||||||||||||||||| |||     ||||     
T  21520956 tttctaaacccttgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatc 21521055  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||  |||||||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    ||||    
T  21521056 tgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttgcttc-aaaa 21521154  T
Q  194 ctaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| || |||||||||||||||  ||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  21521155 ctgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattcctgtag-aacctgattttaagttaactctca 21521232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 42064507 - 42064233
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||||| ||||||||||| || |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  42064507 tttctaaacccttgtttcagctccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 42064409  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| || || ||||||||||||||||||||||||||| ||| ||  |||      
T  42064408 gcactaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttg-cctcaaact 42064310  T
Q  195 taaaaccttca-tcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| || |||| ||||||||||  || |||||||||||||| |||||| | | ||||||||||||||||||||    
T  42064309 tgaaacctccagtcgtaccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctca 42064233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 36559213 - 36559356
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  36559213 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 36559312  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  36559313 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 36559356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 6259078 - 6259351
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||| ||||||||| || ||||||||||||| ||||| ||| ||| || ||||||||||||| |||||||||||||||||||||     || | |    
T  6259078 tttctaaactcttgtttcatcctcctctatctcaaa-gtttagtctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtct 6259176  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||| ||||||||||||| | | |||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||  ||  |||||    
T  6259177 gcacccaaaaatatgtttctgttattcaccgccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactt-tcctcaaaac 6259275  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctc 269  Q
    | |||| | | || ||||||||||||   ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  6259276 tgaaacatccaatagtgccacgttgcacagccatcgtgccacgatttctgcag-aacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 134 - 270
Target Start/End: Original strand, 36561539 - 36561675
Alignment:
Q  134 ccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgcc 233  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  |  |||  ||| |||||||    
T  36561539 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgtgaagcccagccgtcgtgcc 36561638  T
Q  234 acgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| ||||||||||||||||||||||||||||||    
T  36561639 acgattgtgcagaaacctgattttaagttaactctca 36561675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 45332530 - 45332673
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  45332530 cagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 45332629  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45332630 tcgtgccacgattctgcagaaacctgattttaagttaactctca 45332673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 13910307 - 13910491
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| || ||||||||||     |||| |    
T  13910307 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatct 13910405  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgc 180  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  13910406 gcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgc 13910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 22407672 - 22407946
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||||| |||| ||||||| | ||||||||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |    
T  22407672 tttctaaacccttgtttcagcaccctatatctcaca-gtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatct 22407770  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||||||||||||||||||||| || | |||||||||||||||||| || ||||||||||||| |||||| || || |||| ||  |||||    
T  22407771 gcacccaaaaatacgtttctgttattcgctgccaacgcaccatcgtgccacgttgtgatcccatcgtgccacaattttttcactgacttg-cctcaaaac 22407869  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||| | | ||||||||| ||| || | | |||||||||||||| |||||| ||||| ||||||| ||||||||||    
T  22407870 tgaaacatccaatcgtgccatgttacccttcaatcgtgccacgattcctgcag-aacctaattttaaattaactctca 22407946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 40032321 - 40032584
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||| ||     |||| |    
T  40032321 tttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatct 40032419  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||||||||||||||||||||| |||| |||||||||           | |||||||||||||||    ||||||| ||||  |  |||||    
T  40032420 gcacccaaaaatacgtttctgttattcgctgccagcgcaccatcgt-----------atcccatcgtgccacgaaaaatccagtgacttg-tctcaaaac 40032507  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  40032508 tgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatttctgcag-aacctgattttaagttaactctca 40032584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22287599 - 22287764
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| | ||||||||| ||||||| | ||| || ||||||||||||| |||||||||||||||||||||     ||||||    
T  22287599 tttctaaacccttgtttcagccccctatatctcaaa-gtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatat 22287697  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgt 161  Q
    ||||  ||| |||| ||| |||||||||||| |||| |||||| |||||||||| ||| ||||||||    
T  22287698 gcacccaaacatacatttttgttattcgctgccagcgcaccatggtgccacgttacgatcccatcgt 22287764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 43623968 - 43624079
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 253  Q
    ||||||||||||||||||| ||||||||||||   |||||| |||||| || |||||||| ||||||  |||||||||||| ||||||||||||||||||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctc-aaaactgaaacctccaatcgtgccatgttgcccagccatcgtgccatgattctgcagaaacctga 43624066  T
Q  254 ttttaagttaact 266  Q
    |||||||||||||    
T  43624067 ttttaagttaact 43624079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6264408 - 6264535
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| ||||| |||||||||||||||     |||| |    
T  6264408 tttctaaacctttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatct 6264506  T
Q  95 gcactgaaaaatacgtttctgttattcgc 123  Q
    ||||  ||||||| |||||||||||||||    
T  6264507 gcacccaaaaatatgtttctgttattcgc 6264535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 35107256 - 35107110
Alignment:
Q  37 gtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtcagcc 131  Q
    ||||||| ||||| || ||||||||||||| |||||||||| ||||||||||     |||| |||| ||||||||||| || ||||||||||  |||||     
T  35107256 gtttactatgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgcattgaaaaatacgattatgttattcgccttcagcg 35107157  T
Q  132 caccatcgtgccacgttgcgaccccatcgtgccacgatttttccagt 178  Q
    |||||  ||| |||||| ||| ||||||||| |||| ||||||||||    
T  35107156 caccaatgtgacacgttacgatcccatcgtgacacgttttttccagt 35107110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37963190 - 37963266
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctcaag-gtttactcttatacaaagtctatatttatagtaaaagtatc 37963266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42452775 - 42452700
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || |||||||||||||||||||||||    
T  42452775 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaatgtctatatttataataaaagtat 42452700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43623831 - 43623980
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||| |||||||| |||| ||||||||  | ||||||||||||| || |||||| |||||| ||||||||| |||||||||||     |||| |    
T  43623831 tttctaaaccattgtttcacccccctctatctccca-gtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatct 43623929  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||   ||||||||||| ||||||| |||| |||| |||||||||||||||    
T  43623930 gcac-ccaaaatacgtttatgttatttgctgccagcgcaccatcgtgccacg 43623980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18800565 - 18800686
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| | |||||| |  |||||| |||||| || ||||||||||||| ||||||||||| |||||||||     |||| |    
T  18800565 tttctaaacccttgtttcagccccctatatctccat-gtttaccctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatct 18800663  T
Q  95 gcactgaaaaatacgtttctgtt 117  Q
    ||||| ||||||| |||||||||    
T  18800664 gcacttaaaaatatgtttctgtt 18800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31733028 - 31733100
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||||||||| ||||||    
T  31733028 tttctaaacccttgtttcagccccctctatctcaat-gtttactctgttacaaagtctatatttatagtaaaag 31733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 11578368 - 11578439
Alignment:
Q  2 ttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||||||| ||||||    
T  11578368 ttctaaacccttgtttcagcccactctatctcaaga-tttaccctgatataaggtctatatttatagtaaaag 11578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19007632 - 19007560
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || ||||||| ||||| |||| ||||||||||| ||||||    
T  19007632 tttctaaacccttgtttcagccccctctatctc-aaggtttactatgatacaaagcctatatttatagtaaaag 19007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22163210 - 22163282
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| |||||| || ||||||||||||| ||||||    
T  22163210 tttctaaatccttgtttcagccccctctatctcaaa-gtttacactgatacaatgtctatatttatagtaaaag 22163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 45280248 - 45280322
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||| || || |||||||||| | ||||||    
T  45280248 tttctaaacccttgtttcagccccctctatctc-aaagtttgctctgatacaaggtatatatttatagtgaaagta 45280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 3022151 - 3022090
Alignment:
Q  5 taaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||| ||| ||||||||  ||||||||||||| ||||||||||||||||    
T  3022151 taaacccttgtttcagcctcctatatctcaag-gtttactctgatacaaagtctatatttata 3022090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 6264546 - 6264658
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctg 252  Q
    ||||||||||||||||||||||||| ||||||   |||||| |||| | || || ||||||||||||   ||||||||| || ||| |||||||| ||||    
T  6264546 ccatcgtgccacgatttttccagtgacttgcctc-aaaactgaaacatccaatcatgccacgttgcccaaccatcgtgcaacaatttctgcagaa-cctg 6264643  T
Q  253 attttaagttaactc 267  Q
    |||||||||||||||    
T  6264644 attttaagttaactc 6264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 36561490 - 36561532
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgat 169  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  36561490 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 36561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 12342673 - 12342749
Alignment:
Q  2 ttctaaaccctt-gtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||| ||||||||||| ||||||||||  ||||||||||||| || || |||||||||| ||||||||||    
T  12342673 ttctaaaccctttgtttcagccccctctatctcaag-gtttactctgatacaatgtgtatatttatagtaaaagtatc 12342749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17849109 - 17849037
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || || |||||||||| ||||||    
T  17849109 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtttatatttatagtaaaag 17849037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28196629 - 28196557
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||| ||||||||||||| ||||||||||  ||||||||||||| ||||  |||||||||| ||||||    
T  28196629 tttctaaacctttgtttcagccccctctatctcaat-gtttactctgatacaaagcatatatttatagtaaaag 28196557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 42923773 - 42923849
Alignment:
Q  2 ttctaaacccttgtttcagcc-cctctatctc-aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||| ||||||||||  || ||||||| ||||  || ||||||||||||| |||||||||    
T  42923773 ttctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaagtat 42923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 38190819 - 38190737
Alignment:
Q  102 aaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc 185  Q
    |||||||||||||||||||  || |||||  |||||||||||||||| |||   ||||||| ||||| |||||||||| |||||    
T  38190819 aaaatacgtttctgttatttcct-tcagcgtaccatcgtgccacgttacgattacatcgtggcacgaattttccagtgacttgc 38190737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 8040452 - 8040486
Alignment:
Q  135 catcgtgccacgttgcgaccccatcgtgccacgat 169  Q
    |||||||||||||| ||||||||||||||||||||    
T  8040452 catcgtgccacgtttcgaccccatcgtgccacgat 8040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11739823 - 11739895
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||| ||| |||||||||||| || |||||| || ||| || ||||||||||||| ||||||    
T  11739823 tttctaaacccttgttccagccccctctatctc-aaggtttacactaatacaatgtctatatttatagtaaaag 11739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23452500 - 23452579
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||||||| ||| ||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  23452500 tttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 23452579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5377692 - 5377770
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||    ||||||| |||||| | || ||||||||||||| | ||||||    
T  5377692 tttctaaacccttgtttcagtcccctctatctctctcaaagtttgctctgaaacaaggtctatatttatagtgaaagta 5377770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 45280457 - 45280501
Alignment:
Q  226 atcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||    
T  45280457 atcgtggcacgattctccagaattctgattttaagttaactctca 45280501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 8e-73; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 14507438 - 14507714
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||| |||||| ||||||||||| |||| |||| ||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  14507438 tttctaaacccttgttttagccccctctatctcaaa-gtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 14507536  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttg--cccagaaa 192  Q
     |||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||   | | |||    
T  14507537 acactcaaaaatatgtttctgtttttcgctggcagcgcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaa 14507636  T
Q  193 actaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||| |||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  14507637 actgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctca 14507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 8995530 - 8995257
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||| |||||| ||||||||  | ||||||||||||| ||  |||||||||||| |||||||||||||||||||||     |||| |    
T  8995530 tttctaaacccttgttttagccccctctatctctca-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 8995432  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  |||| ||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  8995431 gcacccaaaa-tacgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaac 8995334  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  ||||||||||||||||| || ||| | ||||||||||||||||||||||    
T  8995333 tgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattcctacag-atcctgattttaagttaactctca 8995257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 9019977 - 9019704
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||| |||||| ||||||||  | ||||||||||||| ||  |||||||||||| |||||||||||||||||||||     |||| |    
T  9019977 tttctaaacccttgttttagccccctctatctctca-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 9019879  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  |||| ||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  9019878 gcacccaaaa-tacgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaac 9019781  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  ||||||||||||||||| || ||| | ||||||||||||||||||||||    
T  9019780 tgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattcctacag-atcctgattttaagttaactctca 9019704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 26068737 - 26068880
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||     
T  26068737 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcatgccacgttgccttgccg 26068836  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26068837 tcgtgccacgattctgcagaaacctgattttaagttaactctca 26068880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 11983292 - 11983562
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||| || ||||||||||||| |||||||| || |||| |||||||| || ||||||||||||| ||||||| ||| |||||||||     |||| |    
T  11983292 tttctaagcctttgtttcagccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatct 11983390  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |  ||  | |||    
T  11983391 gcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc--ttacctcacaac 11983488  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    | |||||| |||||| ||| ||||||   ||||||| |||||||||||||||||||||||||||||||||||||    
T  11983489 tgaaacctccatcgtaccatgttgcccaaccatcgtaccacgattctgcagaaacctgattttaagttaactct 11983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 26066466 - 26066609
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||     
T  26066466 cagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaataactaaaacctccatcgtgccacgttgccttgccg 26066565  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26066566 tcgtgccacgattctacagaaacctgattttaagttaactctca 26066609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 33308830 - 33308687
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||  |||     
T  33308830 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgaagcccagccg 33308731  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33308730 tcgtgccacgattctgcagaaacctgattttaagttaactctca 33308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 33311099 - 33310956
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||  |||     
T  33311099 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgaagcccagccg 33311000  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33310999 tcgtgccacgattctgcagaaacctgattttaagttaactctca 33310956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 29755134 - 29755277
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  29755134 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 29755233  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  29755234 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 29755277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 19227671 - 19227946
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||| |||||| | ||||||||| |||| |||||||| ||  |||||||||||| ||||||| || ||||||||||     |||| |    
T  19227671 tttctaaacccttgtttgagccccctttatctcaaa-gtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatct 19227769  T
Q  95 gcactgaaaaa-tacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    ||||  ||||| || ||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||    
T  19227770 gcacccaaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaa 19227869  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
     | |||||| |||| ||||||||||||   |||||||||||||||| |||||| | | | ||||||||||||||||||    
T  19227870 ttgaaacctccatcatgccacgttgcccaaccatcgtgccacgattcctgcag-atcttaattttaagttaactctca 19227946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 30729098 - 30729281
Alignment:
Q  8 acccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactga 101  Q
    ||||||||||||||||| ||||||||||  ||||||||||||| ||  |||||||||||| |||||||| ||||||||||||     |||| |||||  |    
T  30729098 acccttgtttcagccccctctatctcaag-gtttactctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcaccca 30729196  T
Q  102 aaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||| |||||  ||||||||| ||||||    
T  30729197 aaaatacgtttctgttattcgctgccagcgcactatcgtgccacgttgtgaccccatcgtggcacgaaatttccagtgacttgcc 30729281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 15530386 - 15530659
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    |||||| |||||| ||||||||| ||||||||  | ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||  ||    
T  15530386 ttctaagcccttgcttcagccccctctatctccca-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctg 15530484  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  ||||||| |||||| | |||| ||| |||| ||||||||||||||| |||| ||||||||| |||||| ||||| ||||| ||| ||  |||  |    
T  15530485 cacccaaaaatatgtttctataattcactgccagcacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttg-cctcaaactt 15530583  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | || |||||||||| ||  ||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  15530584 gaaacctccaattgtgccacgttacccagccatcgtgccacgattcctgcag-atcctgattttaagttaactctca 15530659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 15541403 - 15541586
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| ||||||| |  ||||||||||     |||| |    
T  15541403 tttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatct 15541501  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    ||||  ||||||| ||||||| ||||||||| ||||  |||||||||||||||||||| | ||||||| || ||  |||||||||    
T  15541502 gcacctaaaaatatgtttctgctattcgctgccagcgtaccatcgtgccacgttgcgatctcatcgtggcatgaaatttccagtg 15541586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 32280043 - 32279898
Alignment:
Q  5 taaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcact 99  Q
    |||||||||||||||||||||||||||| || ||||||| ||||| || |||||||| ||||  ||||||||||||||||||||     |||| ||||||    
T  32280043 taaacccttgtttcagcccctctatctccaa-gtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgcact 32279945  T
Q  100 gaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
     |||||||| ||| |||||||||| | |||| |||||||||||||||    
T  32279944 caaaaatacatttatgttattcgccgccagcgcaccatcgtgccacg 32279898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1072140 - 1072290
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |    
T  1072140 tttctaaacccttgtttcagctccttctatctcaaa-gtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatct 1072238  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  |||||||||||| |||||||||||| |  |  ||||||||||||||    
T  1072239 gcacccaaaaatacgtttatgttattcgctgcctacgtaccatcgtgccacg 1072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 15532944 - 15533134
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| |||||||||  ||||||||||     |||| |    
T  15532944 tttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatct 15533042  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    ||||  ||||||| |||||| ||||| |||  |||| |||||| ||| |||||||||| | ||||||| ||| |  ||||||||| ||||||    
T  15533043 gcacctaaaaatatgtttctcttatttgctaccagcgcaccattgtgacacgttgcgatctcatcgtggcacaaaatttccagtgacttgcc 15533134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 4816636 - 4816720
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    ||||||| ||||||||| || |||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  4816636 aaaaatatgtttctgttttt-gctaccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtaccttgcc 4816720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 17852592 - 17852518
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||  |||||||||||||||| |||||||||    
T  17852592 ttctaaacccttgtttcagccccctctatctcaag-gtttactctgattcaaagtctatatttatagtaaaagtat 17852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 24192651 - 24192733
Alignment:
Q  89 aaatatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgattt 171  Q
    |||| |||||||||||||| ||||||||||||||||| |||| | ||||| |||||| |||| | ||||||||| ||||||||    
T  24192651 aaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcatgccacattgcaatcccatcgtggcacgattt 24192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32447579 - 32447651
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||| |||| ||||||||||| ||||||    
T  32447579 tttctaaacccttgtttcagccccctctatctcaag-gtttactctgatacaaagcctatatttatagtaaaag 32447651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12195778 - 12195853
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| |||||||||||| ||||||| || ||||| || ||||||||||||| |||||||||    
T  12195778 tttctaaacccttgtttcagccccctctatctc-aaagtttgctttgatacaaggtctatatttatagtaaaagtat 12195853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 24191554 - 24191636
Alignment:
Q  89 aaatatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgattt 171  Q
    |||| |||||||||||||| ||||||||||||||||| |||| | ||||| | |||| |||| | ||||||||| ||||||||    
T  24191554 aaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcataccacattgcaatcccatcgtggcacgattt 24191636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3390430 - 3390354
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||||||||||| |||||||| || |||||  |||||| || ||||||||||||| ||||||||||    
T  3390430 tttctaaacccttgtttcagccccgtctatctc-aaggtttatactgatacaatgtctatatttatagtaaaagtatc 3390354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 4816739 - 4816784
Alignment:
Q  226 atcgtgccacgattctgcagaaa-cctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  4816739 atcgtgccacgattctgcagaaaacctgattttaagttaactctca 4816784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13057245 - 13057173
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  13057245 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 13057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13870685 - 13870749
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    ||||||||||||| |||||||||||||||||| || |||| |||||||| |||| |||||||||||    
T  13870685 tttctaaacccttatttcagcccctctatctc-aaggtttgctctgatacaaagcctatatttata 13870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24338711 - 24338783
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  24338711 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 24338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14459028 - 14459095
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataat 68  Q
    ||||||||||||| |||||||||| ||||||||||| |||| |||||||| || |||||||||||||||    
T  14459028 tttctaaacccttatttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttataat 14459095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15346441 - 15346366
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||| ||||||||| ||||||||||  |||||| |||||| || ||||||||||||| ||||||||||    
T  15346441 ttctaaacccttggttcagccccctctatctcaag-gtttacactgatacaatgtctatatttatagtaaaagtatc 15346366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28241584 - 28241658
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| || ||||||||||||| | ||||||    
T  28241584 tttctaaacccttgtttcagccccctctatctc-taagtttgctctgatacaaggtctatatttatagtgaaagta 28241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 1072328 - 1072393
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||   ||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  1072328 atcgtgccacgttgcccaaccatcgtaccacgatttctgcagaa-cctgattttaagttaactctca 1072393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25477325 - 25477253
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||| | ||||||    
T  25477325 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttacagtaaaag 25477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2629148 - 2629228
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctc-----aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||||||||||||      ||||||||   ||||| || ||||||||||||| |||||||||    
T  2629148 tttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagtat 2629228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12161818 - 12161889
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||||||||| |||||| || ||||||  ||||| || ||||||||||| | ||||||    
T  12161818 tttctaaacccttgtttcagcccctttatctc-aaggtttacaatgatacaatgtctatatttaaagtaaaag 12161889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1230512 - 1230586
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| || ||||| || ||||||||||||| | ||||||    
T  1230512 tttctaaacccttgtttcaaccctctctatctc-aaagtttgctatgatacaaggtctatatttatagtgaaagta 1230586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3632201 - 3632271
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaa 71  Q
    ||||||||||||||||||| | ||||||||||| || |||||| |||||| || ||||||||||||| ||||    
T  3632201 tttctaaacccttgtttcaactccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaa 3632271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 1230719 - 1230765
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  1230719 ccatcgtggcacgattctccagaattctgattttaagttaactctca 1230765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 17695334 - 17695380
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  17695334 ccatcgtggcacgattctccagaattctgattttaagttaactctca 17695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 26064804 - 26064758
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  26064804 ccatcgtggcacgattctccagaattctgattttaagttaactctca 26064758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 26084773 - 26084727
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  26084773 ccatcgtggcacgattctccagaattctgattttaagttaactctca 26084727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 28241812 - 28241858
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  28241812 ccatcgtggcacgattcttcagaattctgattttaagttaactctca 28241858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 33215617 - 33215571
Alignment:
Q  133 accatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    ||||||||||||||||||||   ||||||| ||||||||||||||||    
T  33215617 accatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 33215571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13039805 - 13039733
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||| ||| |||||| || |||||| |||||| ||  |||||||||||| ||||||    
T  13039805 tttctaaacccttgtttcagcctcctatatctc-aaggtttacactgatacaatatctatatttatagtaaaag 13039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25466433 - 25466509
Alignment:
Q  1 tttctaaacccttgttt-cagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||| ||||| ||||| |||||  ||||||||||| | ||  |||||||||||| ||||||||||    
T  25466433 tttctaaacccttgttttcagcctctctacctcaag-gtttactctgacaaaagatctatatttatagtaaaagtatc 25466509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30034866 - 30034945
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||| ||| |||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  30034866 tttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaagtat 30034945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 38882122 - 38881847
Alignment:
Q  1 tttctaaacccttgtttcagcccc--tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    ||||||||||||||||||||||||  |||||||| || |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     ||||     
T  38882122 tttctaaacccttgtttcagcccccctctatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatc 38882024  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||  ||||||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||    
T  38882023 tgcacccaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaa 38881924  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||| |||||||||||||||||  || |||||||||||||| |||||| | | ||||||||||||||||||||    
T  38881923 ctaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctca 38881847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 4236645 - 4236374
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||| |||||||||||||| | |||||| || |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  4236645 tttctaaactcttgtttcagccccctttatctccaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 4236547  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||||  |||||||||||||||| ||| ||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||  |||||    
T  4236546 gcact-caaaatacgtttctgtttttccctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttg-ccttaaaac 4236449  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    | |||||| | ||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||    
T  4236448 tgaaacctccaatcgtgccacgttgcccagccatcgtgccacaattctgcagaaatctgattttaagttaactct 4236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 34477487 - 34477630
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||  ||||    
T  34477487 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagcca 34477586  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  34477587 tcgtgccacgattctgcagaaacttgattttaagttaactctca 34477630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 21948042 - 21947772
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| ||    
T  21948042 tttctaaacccttgtttcagcccctctatctcaaaa-tttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 21947944  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaact 195  Q
    |||  ||||||| ||||||||||||||||| ||   ||||||||||||||||||| | ||||||||||||||     ||||||| |||  ||  ||||||    
T  21947943 cacccaaaaatatgtttctgttattcgctgcca---caccatcgtgccacgttgcaatcccatcgtgccacgtaaagtccagtgactt-acctcaaaact 21947848  T
Q  196 aaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
     |||||| | |||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  21947847 gaaacctccaatcgtgtcacgttgcctagccatcgtgccacgatttctgcag-aacctgattttaagttaactctca 21947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 25921736 - 25921990
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  25921736 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 25921834  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc-cagaaaa 193  Q
    ||||  |||||||||||||||||||||||||||||| ||||||||||||                     |||||||||||||||||||||| || ||||    
T  25921835 gcacccaaaaatacgtttctgttattcgctgtcagcgcaccatcgtgcc---------------------acgatttttccagtgccttgcctcaaaaaa 25921913  T
Q  194 ctaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||    
T  25921914 ctgaaacctccatcgtgccacgttgtccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctca 25921990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 88 - 270
Target Start/End: Complemental strand, 31544982 - 31544800
Alignment:
Q  88 taaatatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgccc 187  Q
    ||||| |||||  ||||||| ||||||||| ||  | | |||| |||||||||| | || || |||||||||||||||||||||||||||||||||||||    
T  31544982 taaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttgccc 31544883  T
Q  188 agaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | ||||||||||||| |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||    
T  31544882 aaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctgattttaagttaactctca 31544800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 2174797 - 2174682
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 254  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2174797 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 2174698  T
Q  255 tttaagttaactctca 270  Q
    ||||||||||||||||    
T  2174697 tttaagttaactctca 2174682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 10749650 - 10749507
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  10749650 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 10749551  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  10749550 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 10749507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 16776170 - 16775899
Alignment:
Q  5 taaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatattt-ataataaaagtatcgcttaaaattt-----aaatatgca 97  Q
    |||||||||||||||||||| ||||||||||| |||| ||| |||| || |||||||||| ||| |||||||||||||||||||||     |||| | ||    
T  16776170 taaacccttgtttcagccccctctatctcaaa-gtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatcttca 16776072  T
Q  98 ctgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaa 197  Q
    || ||||||| ||||||||| |||| || |||| ||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||  |||  | |    
T  16776071 ctcaaaaatatgtttctgtttttcgatgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttg-cctcaaacttga 16775973  T
Q  198 aaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||| | |||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||| |||||    
T  16775972 aacctccaatcgtgtcacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaattctca 16775899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 31542613 - 31542444
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaac 200  Q
    ||||||| ||||||||| ||  | | |||| |||||||||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31542613 aaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaac 31542514  T
Q  201 cttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    || |||||||||||||||||  || |||||| ||||||| ||||||||||||||||||||||||||||||    
T  31542513 ctccatcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctgattttaagttaactctca 31542444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 10757105 - 10756962
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  10757105 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 10757006  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  10757005 tcgtgctacgattgtgcagaaacctgattttaagttaactctca 10756962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 15354920 - 15355063
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  15354920 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctg 15355019  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  15355020 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 15355063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 15357196 - 15357339
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  15357196 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctg 15357295  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  15357296 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 15357339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 34479855 - 34479970
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 254  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34479855 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgat 34479954  T
Q  255 tttaagttaactctca 270  Q
    ||||||||||||||||    
T  34479955 tttaagttaactctca 34479970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 20507725 - 20507999
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||||||||||| |||||||||||||||||  ||     |||| |    
T  20507725 tttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaacaaatct 20507823  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    || |  ||||||| |||||||||||||||||  ||| |||| |||||||| ||||| | |||||||||||||||    |||| || |||| ||  |||||    
T  20507824 gctcccaaaaatatgtttctgttattcgctgctagcgcaccttcgtgccatgttgcaatcccatcgtgccacgaaaaatccaatgacttg-cctcaaaac 20507922  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| | ||||||| ||||||||   | |||||||||||| |||||||| ||||||||||||||||||||||||    
T  20507923 taaaacctccaatcgtgctacgttgcccaactatcgtgccacgatttctgcag-aacctgattttaagttaactctca 20507999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 23664979 - 23664836
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||| || ||||||||| ||  |||  ||      
T  23664979 cagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctg 23664880  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23664879 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 23664836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 23667254 - 23667111
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||| || ||||||||| ||  |||  ||      
T  23667254 cagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctg 23667155  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23667154 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 23667111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 23793608 - 23793751
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||| || ||||||||| ||  |||  ||      
T  23793608 cagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctg 23793707  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23793708 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 23793751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 21684757 - 21684909
Alignment:
Q  34 aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtca 128  Q
    ||||||||  |||||| || ||||||||||||| ||||||| | |||||||||||     |||| |||||| ||||||| ||||||||| ||||||| ||    
T  21684757 aaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgcca 21684856  T
Q  129 gcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgcc 181  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21684857 gcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 21684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 36402592 - 36402740
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt----aaatatgc 96  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||    |||| |||    
T  36402592 ttctaaacccttgtttcagccccctctatctcaac-gtttactctgatataaggtctatatttatagtaaaagtatcgcttaaaatttgaacaaatctgc 36402690  T
Q  97 actgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||  |||||||||||||||||||||| || || | |||||||||||||||    
T  36402691 acccaaaaatacgtttctgttattcgttgccaacgcaccatcgtgccacg 36402740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 38960487 - 38960602
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |   |||  ||| ||||||||||||| ||||||||||||||    
T  38960487 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcaaagcccagccgtcgtgccacgattgtgcagaaacctgat 38960586  T
Q  255 tttaagttaactctca 270  Q
    ||||||||||||||||    
T  38960587 tttaagttaactctca 38960602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 39797966 - 39797851
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 254  Q
    ||||||||||| ||||||||| ||||||||||   |||||| |||||| |||| ||||||||||||  ||||||||||||||||| ||||||||||||||    
T  39797966 ccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattatgcagaaacctgat 39797867  T
Q  255 tttaagttaactctca 270  Q
    ||||||||||||||||    
T  39797866 tttaagttaactctca 39797851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 31179809 - 31179897
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacg 215  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  31179809 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctccatcgtgccacg 31179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2818599 - 2818728
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  2818599 tttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 2818697  T
Q  95 gcactgaaaaatacgtttctgttattcgctg 125  Q
    ||||   ||||||||||| ||||||||||||    
T  2818698 gcacccgaaaatacgtttttgttattcgctg 2818728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 12556187 - 12556336
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||| |||     |||| ||    
T  12556187 ttctaaacccttatttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctg 12556285  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
     ||  |||||||| |||||||||||||||| |||| || ||||||||||||    
T  12556286 tacacaaaaatacatttctgttattcgctgccagcgcatcatcgtgccacg 12556336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 659829 - 659715
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctg 252  Q
    ||||||||||||||||||||||||| ||||||    ||||| |||||| | ||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcc--tcaaactgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatttctgcag-aacctg 659733  T
Q  253 attttaagttaactctca 270  Q
    ||||||||||||||||||    
T  659732 attttaagttaactctca 659715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 6756510 - 6756360
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||| |||||||||| |||||||||||||| ||||| | ||||| ||  |||||||| ||| |||||||||  ||||||||||     |||| |    
T  6756510 tttctaaaccattgtttcagctccctctatctcaaa-gtttaatatgatacaagatctatattaatagtaaaagtataacttaaaatttggaataaatct 6756412  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  ||||||||||||||||||||||||| |||| |||||||||||||||    
T  6756411 gcaccaaaaaatacgtttctgttattcgctgccagcgcaccatcgtgccacg 6756360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 21684905 - 21684967
Alignment:
Q  208 gtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctca 21684967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 18186520 - 18186585
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18186520 atcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctca 18186585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 20504316 - 20504450
Alignment:
Q  136 atcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttca-tcgtgccacgttgccttgccatcgtgcca 234  Q
    ||||||||||||||| | |||||||||||||||    |||| || ||||||   ||||||||||||| || |||||||||||||||  || |||||||||    
T  20504316 atcgtgccacgttgcaatcccatcgtgccacgaaaaatccattgacttgcctc-aaaactaaaacctccaatcgtgccacgttgcccagctatcgtgcca 20504414  T
Q  235 cgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  20504415 cgatttctgcagaa-cctgattttaagttaactctca 20504450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 2174935 - 2174802
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || | || |||||||| |||||| ||||||||||||||     |||| |    
T  2174935 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatct 2174837  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcag 129  Q
    ||||| ||||||| ||||||||| ||||||| |||    
T  2174836 gcactcaaaaatatgtttctgtttttcgctgccag 2174802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 31179885 - 31179931
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31179885 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 31179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39854499 - 39854426
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  39854499 tttctaaacccttgtttcagcccctctatctc-aaagtttgctctgatacaaggtctatatttatagtgaaagta 39854426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 31466379 - 31466494
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaacct-tcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctg 252  Q
    ||||||||||| ||||||||||||| ||||||   | |||| |||| | |||||||||||||||||| | | |||||||||||||| ||||| |||||||    
T  31466379 ccatcgtgccaagatttttccagtgacttgcctc-ataactgaaacatctcatcgtgccacgttgcccttcaatcgtgccacgattcctgca-aaacctg 31466476  T
Q  253 attttaagttaactctca 270  Q
    ||||||||||||||||||    
T  31466477 attttaagttaactctca 31466494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 18509582 - 18509652
Alignment:
Q  2 ttctaaacccttgtttcagcccctctatctc-aaaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||| || ||||||||||||| ||||    
T  18509582 ttctaaacccttgtttcagcccctctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31542751 - 31542666
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||||||||||||||||||| ||||||||||| |||| || ||||| || ||||||||||||| ||||||| | |||||||||    
T  31542751 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaat 31542666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 31466245 - 31466389
Alignment:
Q  5 taaacccttgtttcagcccctct-atctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcac 98  Q
    |||||| |||||||||||||| | |||||||| ||||| ||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |||||    
T  31466245 taaacctttgtttcagccccttttatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcac 31466343  T
Q  99 tgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgcca 144  Q
      |||||||| ||| || ||||| ||| |||  |||||||||||||    
T  31466344 ccaaaaatacatttatggtattccctgccagtgcaccatcgtgcca 31466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 10586857 - 10586780
Alignment:
Q  2 ttctaaacccttgtttcagcccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||||||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  10586857 ttctaaacccttgtttcagcccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 10586780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17818753 - 17818826
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||| ||||||||||||||||| |||| || |||||| |||||| || |||||||||||||| |||||||    
T  17818753 tttctaaactcttgtttcagcccctctttctc-aaggtttacactgatacaatgtctatatttataacaaaagta 17818826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31179634 - 31179707
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    ||||||||||||||||||||| ||||||||||| ||||||| || ||||| || ||||||||||||| |||||||    
T  31179634 tttctaaacccttgtttcagctccctctatctc-aaagtttgctttgatacaatgtctatatttatagtaaaagt 31179707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31545096 - 31545011
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||||||||||||||||||| | ||||||||| |||| || ||||| || ||||||||||||| ||||||| | |||||||||    
T  31545096 tttctaaacccttgtttcagccccctttatctcaaa-gtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaat 31545011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17072899 - 17072827
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  17072899 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 17072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24126872 - 24126800
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||| |||||||||||||| ||||||||||  |||||| ||||||||| ||||||||||||| ||||||    
T  24126872 tttctaaactcttgtttcagccccatctatctcaag-gtttacactgatataatgtctatatttatagtaaaag 24126800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25904119 - 25904047
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  25904119 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 25904047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 36402778 - 36402843
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||| | ||||||  |||||||||||  |||||||||||||||| ||||||||||||||||||    
T  36402778 atcgtgctatgttgcccagccatcgtgcctagattctgcagaaacctaattttaagttaactctca 36402843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 39798070 - 39797970
Alignment:
Q  35 aagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtcag 129  Q
    ||||||||||| ||| || ||||||||||||| ||||||| | |||||||||||     |||| |||||  ||||||| ||||||||||||||||| |||    
T  39798070 aagtttactctaatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgccag 39797971  T
Q  130 c 130  Q
    |    
T  39797970 c 39797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10529362 - 10529436
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||||||||||||| ||| |||||||||||| |||| |||||||| || ||||||||||||| | ||||||    
T  10529362 tttctaaacccttgtttcaacccactctatctcaaa-gtttgctctgatacaaggtctatatttatagtgaaagta 10529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 18511476 - 18511547
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctc-aaaagtttactctgatataaagtctatatttataataaa 71  Q
    ||||||||||||||||||| ||||||||||||  |||||||| ||||||| || ||||||||||||| ||||    
T  18511476 ttctaaacccttgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatattaaa 18511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 26097748 - 26097674
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||| || |||||||||| ||||||||||| ||||||||||||  || ||||||||||||| |||||||||    
T  26097748 ttctaaacctttatttcagccccctctatctcaaa-gtttactctgattcaaggtctatatttatagtaaaagtat 26097674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 41585970 - 41586044
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||| | ||||||||  ||||||||||||| |||  ||||||||||| |||||||||    
T  41585970 ttctaaacccttgtttcagccccctttatctcaag-gtttactctgatacaaaacctatatttatagtaaaagtat 41586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36208597 - 36208524
Alignment:
Q  1 tttctaaacccttgttt-cagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||| ||||||| ||||||||||  ||||||||||||| || ||||||||||||| ||||||    
T  36208597 tttctaaacccttgttttcagccccctctatctcaag-gtttactctgatacaaggtctatatttatagtaaaag 36208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 40221537 - 40221464
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||   || ||||||||||||| ||||||||    
T  40221537 ttctaaacccttgtttcagccccctctatctc-aaggtttactctgagtcaatgtctatatttatagtaaaagta 40221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 659850 - 659899
Alignment:
Q  137 tcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcc 186  Q
    |||||||||  ||||||| |||||||||||||||||||||||| ||||||    
T  659850 tcgtgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcc 659899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 6661446 - 6661510
Alignment:
Q  2 ttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||| ||| |||||||||||  ||||||||||||| || |||||||||||||    
T  6661446 ttctaaacccttgtttcaaccctctctatctcaag-gtttactctgatacaaggtctatatttata 6661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34530929 - 34531001
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||| |||||||||||||| ||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  34530929 tttctaaacacttgtttcagccccctctatctcaag-gtttactctgattcaaagtctatatttacagtaaaag 34531001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39398256 - 39398289
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  39398256 tttctaaacccttgtttcagcccctctatctcaa 39398289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4410077 - 4409999
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||    ||||||| |||||||| || ||||||||||||| | ||||||    
T  4410077 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagta 4409999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 2818779 - 2818845
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaag-ttaactctca 270  Q
    ||||||||| ||||||| ||||||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  2818779 atcgtgccatgttgcctagccatcgtgccacgatttctgcag-aacctaattttaagtttaactctca 2818845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 26098515 - 26098589
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||| |||||||||| |||||||| |  ||||||||||||  || ||||||||||||| |||||||||    
T  26098515 ttctaaacccttatttcagccccctctatctccag-gtttactctgattcaaggtctatatttatagtaaaagtat 26098589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 42238094 - 42238047
Alignment:
Q  132 caccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtg 179  Q
    |||||||||||||||||||||   ||||||| ||||||||||||||||    
T  42238094 caccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 42238047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 661227 - 661284
Alignment:
Q  213 acgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||| |||||| | |||||||| |||||||| ||||||||||||||||||||||    
T  661227 acgttgcctagccatcataccacgatttctgcagaa-cctgattttaagttaactctca 661284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 1240126 - 1240080
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  1240126 ccatcgtggcacgattctccagaattctgattttaagttaactctca 1240080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 6747092 - 6747046
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  6747092 ccatcgtggcacgattctccagaattctgattttaagttaactctca 6747046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 20045023 - 20044954
Alignment:
Q  4 ctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||||| ||| ||||||  |||| |||||||| |||| ||||||||||| ||||||    
T  20045023 ctaaacccttgtttcagccccctctgtctcaag-gtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2954432 - 2954368
Alignment:
Q  1 tttctaaacccttgtttca-gcccctctatctcaaaagtttactctgatataaagtctatatttat 65  Q
    |||||||||||||||||||  | |||||||||| ||||||||| |||||| |||| ||||||||||    
T  2954432 tttctaaacccttgtttcatactcctctatctc-aaagtttacactgatacaaagcctatatttat 2954368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18466700 - 18466625
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  |||||| || ||||||||||||| |||||    
T  18466700 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18469027 - 18468948
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||   ||||| || ||||||||||||| |||||||||    
T  18469027 tttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagtat 18468948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 18596656 - 18596588
Alignment:
Q  8 acccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||| |||||| |||  ||||||||||||  || ||||||||||||| |||||||||    
T  18596656 acccttgtttcagccccctctatcccaag-gtttactctgattcaaggtctatatttatagtaaaagtat 18596588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20043066 - 20042994
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||| |||||||||| |||||||||||| || |||| || ||||| |||| ||||||||||| ||||||    
T  20043066 tttctaaacacttgtttcagccccctctatctc-aaggtttgctatgatacaaagcctatatttatagtaaaag 20042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 40222481 - 40222416
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||||| |  |||||||| ||||||||| ||||   |||||||||||||||||||||    
T  40222481 atcgtggcacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 40222416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 42238021 - 42237956
Alignment:
Q  205 atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||||| |  |||||||| ||||||||| ||||   |||||||||||||||||||||    
T  42238021 atcgtggcacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 42237956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 10529592 - 10529636
Alignment:
Q  226 atcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||    
T  10529592 atcgtggcacgattctccagaattctgattttaagttaactctca 10529636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 27306492 - 27306765
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  27306492 tttctaaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 27306590  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  |||||||||||||||||||||||||  ||| |||||||||||||||  |||||||||||||||||||||||||||| || |||| ||  |||||    
T  27306591 gcacccaaaaatacgtttctgttattcgctgctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttg-cctcaaaac 27306689  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | |||||||||||||| |  ||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  27306690 tgaaacctccaatcgtgccacgttgtccagccatcgtgccacgattttgca-aaaccttattttaagttaactctca 27306765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 3878603 - 3878324
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatt----tataataaaagtatcgcttaaaattt-----a 89  Q
    |||||||||||||||||||||||| ||||||||  ||||||| |||||||| || |||||||||    |||| |||||||||||||||||||||     |    
T  3878603 tttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaaca 3878504  T
Q  90 aatatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccag 189  Q
    ||| |||||  |||| |||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||      
T  3878503 aatctgcacccaaaa-tacgtttctgttattcgctgccagcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctc 3878406  T
Q  190 aaaactaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||  | |||||| | ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  3878405 aaacttgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctca 3878324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 1047358 - 1047501
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||     
T  1047358 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 1047457  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1047458 tcgtgccacgattctgcagaaacctgattttaagttaactctca 1047501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 35655 - 35381
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||| |||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  35655 tttctgaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 35557  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||||||||||| |||| |||| |||| ||| |||| |||||| ||||||||||||||||||||||||||||||||| ||| ||  |||      
T  35556 gcacccaaaaatacgtttctgctatttgctgccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaact 35458  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||| || |||||||||||||| |||||| | | ||||||||||||||||||||    
T  35457 tgaaacctccaatcgtgccacgttgcctagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctca 35381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 25542556 - 25542283
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||| || ||||||||||||| ||||||| |||||||||||||     |||| |     
T  25542556 tttctaaacctttgtttcagcccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatcta 25542458  T
Q  96 cactgaaaaa-tacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||| ||||| || ||||||||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| ||  |||||    
T  25542457 cactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttg-ccttaaaac 25542359  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||  || ||||||||||  | |||||| | | ||||||||||||||||||||    
T  25542358 tgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctca 25542283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 2935215 - 2935072
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  2935215 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 2935116  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  2935115 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 2935072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 9027542 - 9027685
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  |||     
T  9027542 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccg 9027641  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  9027642 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 9027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 22108012 - 22107869
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  22108012 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctgcatcgtgccgcgaagcccagctg 22107913  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  22107912 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 22107869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 22137023 - 22136880
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  22137023 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctg 22136924  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  22136923 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 22136880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 40549772 - 40549629
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  40549772 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctgcatcgtgccgcgaagcccagctg 40549673  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40549672 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 40549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 40552050 - 40551907
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  40552050 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctg 40551951  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40551950 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 40551907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 44590 - 44401
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  44590 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatct 44492  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc 185  Q
    ||||  ||||||| |||| ||||||| |||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  44491 gcacccaaaaatatgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttgc 44401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 18567639 - 18567365
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattta----aatatg 95  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||  |||||||||||| |||||||||||||||||||||     ||| ||    
T  18567639 tttctaaacccttgtttcagccccttctatctcaaa-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaatttg 18567541  T
Q  96 cactgaaaaa-tacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||  ||||| ||||||||||||||||| || |||| ||||||||||||| |||| ||||||||||||||||||    ||||||| |||| ||  |||||    
T  18567540 caccaaaaaaatacgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaac 18567442  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | |||||||||| |||||  || |||||||||||| ||||| || ||||||||||||||| ||||||||    
T  18567441 tgaaacctccaatcgtgccactttgcccagctatcgtgccacgatttctgtag-aacctgattttaagtcaactctca 18567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 31435310 - 31435584
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattta----aatatg 95  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||  |||||||||||| |||||||||||||||||||||     ||| ||    
T  31435310 tttctaaacccttgtttcagccccttctatctcaaa-gtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaatttg 31435408  T
Q  96 cactgaaaa-atacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||  |||| |||||||||||||||||| || |||| ||||||||||||| |||| ||||||||||||||||||    ||||||| |||| ||  |||||    
T  31435409 caccaaaaaaatacgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaac 31435507  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | |||||||||| |||||  || |||||||||||| ||||| || ||||||||||||||| ||||||||    
T  31435508 tgaaacctccaatcgtgccactttgcccagctatcgtgccacgatttctgtag-aacctgattttaagtcaactctca 31435584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 40837144 - 40837259
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 254  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||    
T  40837144 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgtccgaccatcgtgccacgattctgcagaaacctgat 40837243  T
Q  255 tttaagttaactctca 270  Q
    ||||||||||||||||    
T  40837244 tttaagttaactctca 40837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 22392495 - 22392319
Alignment:
Q  5 taaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcac 98  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||| |||||     |||| |||||    
T  22392495 taaacccttgtttcagccccctctatctcaaa-gtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcac 22392397  T
Q  99 tgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttcca 176  Q
    |||||||||| |||||||| || ||   |||| ||||||||| ||||||||||| ||||||||| |||||||| ||||    
T  22392396 tgaaaaatacatttctgttttttgcctccagcgcaccatcgtaccacgttgcgatcccatcgtggcacgatttctcca 22392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 26804462 - 26804347
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 253  Q
    |||||||||||||||||||||| |||||||||   |||||| |||||| || |||| ||||||||||  |||||||||||||||||||| ||||||||||    
T  26804462 ccatcgtgccacgatttttccactgccttgcctc-aaaactgaaacctccaatcgtaccacgttgcccagccatcgtgccacgattctgtagaaacctga 26804364  T
Q  254 ttttaagttaactctca 270  Q
    |||||||||||||||||    
T  26804363 ttttaagttaactctca 26804347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1049558 - 1049708
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||| ||| || ||||||||||||| ||||||| |||||||||||||     |||| |    
T  1049558 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 1049656  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||  ||||||||||||||||||||||| | |||| |||| ||||||||||    
T  1049657 gcacccaaaaatacgtttctgttattcgccgccagcgcaccttcgtgccacg 1049708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 7188568 - 7188493
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||||||||    
T  7188568 ttctaaacccttgtttcagccccctctatctcaag-gtttactctgatacaaagtctatatttatagtaaaagtatc 7188493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 42331263 - 42331337
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  42331263 ttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaagtctatatttatagtaaaagtat 42331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22251805 - 22251892
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt 88  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||  || || |||||||||| ||||||| |||||||||||||    
T  22251805 tttctaaactcttgtttcagcctcctctatctcaaa-gtttactctgattcaaggtttatatttatagtaaaagtgtcgcttaaaattt 22251892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 40837005 - 40837156
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||| |||||||||| || ||||| ||| ||| |||||||| || ||||||||||||| ||||||| || ||||||||||     |||| |    
T  40837005 tttctaaacccttctttcagccccctcaatctccaaa-tttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatct 40837103  T
Q  95 gcact-gaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    |||||  ||||||| |||||| || ||||||| |||| |||||||||||||||    
T  40837104 gcactcaaaaaatatgtttctatttttcgctgccagcacaccatcgtgccacg 40837156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26804595 - 26804512
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt 88  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    | || ||||||||||||| |||||||||||||||||||||    
T  26804595 tttctaaacccttgtttcagccccctctatctc-aaagtttactc----acaaggtctatatttatagtaaaagtatcgcttaaaattt 26804512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 21990175 - 21990106
Alignment:
Q  2 ttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||  || ||||||||||||| |||||    
T  21990175 ttctaaacccttgtttcagcccctctatctc-caggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24817613 - 24817682
Alignment:
Q  2 ttctaaacccttgtttcagcccctctatctcaaaagtttac-tctgatataaagtctatatttataataaa 71  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||| || ||||||||||||| ||||    
T  24817613 ttctaaacccttgtttcagcccctctatctc-aaggtttacatctgatacaaggtctatatttatattaaa 24817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11355284 - 11355212
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| |||| ||||||||||| ||||||    
T  11355284 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaaagcctatatttatagtaaaag 11355212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 20091808 - 20091880
Alignment:
Q  6 aaacccttgttt-cagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||| ||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||||||||    
T  20091808 aaacccttgttttcagccccctctatctcaag-gtttactctgataaaaagtctatatttatagtaaaagtatc 20091880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20137372 - 20137444
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| |||| | ||||||||| ||||||    
T  20137372 tttctaaacccttgtttcagccccctctatctc-aaggtttactctgatacaaagccaatatttatagtaaaag 20137444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22828896 - 22828972
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||| |||||||||||||| ||||||||||  |||||||| |||| |||| ||||||||||| ||||||||||    
T  22828896 tttctaaactcttgtttcagccccctctatctcaag-gtttactcggatacaaagcctatatttatagtaaaagtatc 22828972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24748620 - 24748548
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||||| ||||  ||||| |||||| |||||| || ||||||||||||||||||||    
T  24748620 tttctaaacccttgtttcagccccctctaagtcaaa-gtttacactgatacaatgtctatatttataataaaag 24748548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20626064 - 20625990
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||||||| ||||||||    |||||||| ||||||| || ||||||||||||||||||    
T  20626064 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaa 20625990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20629955 - 20629881
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||||||| ||||||||    |||||||| ||||||| || ||||||||||||||||||    
T  20629955 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaa 20629881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20642374 - 20642300
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||||||| ||||||||    |||||||| ||||||| || ||||||||||||||||||    
T  20642374 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaa 20642300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 443620 - 443546
Alignment:
Q  2 ttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||| |||||| ||| |||||||||||||  ||||||||||||  |||||||||||||||| |||||||||    
T  443620 ttctaaaccattgttttagctccctctatctcaag-gtttactctgattcaaagtctatatttatagtaaaagtat 443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 3677301 - 3677235
Alignment:
Q  5 taaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaa 72  Q
    ||||||||||||||||||||||||||||  ||||||||||||||  ||  |||||||||||| |||||    
T  3677301 taaacccttgtttcagcccctctatctc-caagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 7094686 - 7094759
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaa 71  Q
    ||||||||||||||||||||||| ||||||||    ||||||| |||||||| || ||||||||||||||||||    
T  7094686 ttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaa 7094759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24258489 - 24258424
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttata 66  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| |||  |||||||||||    
T  24258489 tttctaaacccttgtttcagccccctctatctc-aatgtttactctgatacaaaacctatatttata 24258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3035747 - 3035668
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  3035747 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 3035668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 4296199 - 4296271
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaa-gtctatatttataataaaag 73  Q
    ||||||||||||||||||| |||||||||||| || |||||| |||||| ||| ||||||||||||| ||||||    
T  4296199 ttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaaatgtctatatttatagtaaaag 4296271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21680053 - 21679981
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| || ||| || ||||||||||||| ||||||    
T  21680053 tttctaaacccttgtttcagccccctctatctc-aaggtttacactaatacaatgtctatatttatagtaaaag 21679981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24465575 - 24465503
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttac-tctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| |||||||||||| || |||||| ||||||| ||||||||||| |||| |||||    
T  24465575 tttctaaacccttgtttcagccccctctatctc-aaggtttacatctgatacaaagtctatatctatagtaaaa 24465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38394012 - 38393933
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  38394012 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 38393933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7470285 - 7470359
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||| ||||||||||||    |||||||| ||||||| || ||||||||||||| ||||    
T  7470285 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7472243 - 7472317
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaa 71  Q
    |||||||||||||||||||| ||||||||||||    |||||||| ||||||| || ||||||||||||| ||||    
T  7472243 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31156174 - 31156249
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| |||||||||||| ||||||| |  ||||| ||  |||||||||||| |||||||||    
T  31156174 tttctaaacccttgtttcagccccctctatctc-aaagtttgccttgatacaagctctatatttatagtaaaagtat 31156249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 42006456 - 42006404
Alignment:
Q  133 accatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgc 185  Q
    |||||||||||||||| |||  ||||||||||||||||||| ||||| |||||    
T  42006456 accatcgtgccacgttacgattccatcgtgccacgattttttcagtgacttgc 42006404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 13099740 - 13099814
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||| |||| ||||||||||  ||||||| ||||  || ||||||||||||| |||||||||    
T  13099740 ttctaaacccttgtttcaaccccctctatctcaag-gtttactttgattcaaggtctatatttatagtaaaagtat 13099814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 1049730 - 1049811
Alignment:
Q  190 aaaactaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    |||||| |||||| || |||||||||||||||  || |||||||||||||| |||||| | | ||||||||||||||||||||    
T  1049730 aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctca 1049811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7464981 - 7465027
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  7464981 ccatcgtggcacgattctccagaattctgattttaagttaactctca 7465027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 42223182 - 42223110
Alignment:
Q  2 ttctaaacccttgtttcagcccc--tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||| |||   ||||||||||  ||||||||||||| |||| ||||||||||| ||||||    
T  42223182 ttctaaacccttgtttcatcccacatctatctcaag-gtttactctgatacaaagcctatatttatagtaaaag 42223110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 45366516 - 45366446
Alignment:
Q  57 tatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcg 122  Q
    |||||||||| |||||||| | ||||||||||     |||| |||||||||||||||||||||||| ||||    
T  45366516 tatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaaatacgtttctgtttttcg 45366446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21678092 - 21678020
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || ||||||  ||||| ||  |||||||||||| ||||||    
T  21678092 tttctaaacccttgtttcagccccctctatctc-aaggtttacattgatacaatatctatatttatagtaaaag 21678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28485592 - 28485513
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||| ||||| |||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  28485592 tttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 28485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 40946121 - 40946076
Alignment:
Q  225 catcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||    
T  40946121 catcgtggcacgattcttcagaattctgattttaagttaactctca 40946076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44724605 - 44724533
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| ||||| ||||||  | |||||| |||||| || ||||||||||||| ||||||    
T  44724605 tttctaaacccttgtttcagccccctatatctc-caggtttacactgatacaatgtctatatttatagtaaaag 44724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 38430865 - 38430821
Alignment:
Q  128 agcccaccatcgtgccacgttgcgaccccatcgtgccacgatttt 172  Q
    ||||||||||||||||||||| |||  |||||||| |||||||||    
T  38430865 agcccaccatcgtgccacgtttcgagaccatcgtggcacgatttt 38430821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 48457487 - 48457443
Alignment:
Q  226 atcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||    
T  48457487 atcgtggcacgattctccagaattctgattttaagttaactctca 48457443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48457679 - 48457601
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  |||||| || ||||||||||||| | ||||||    
T  48457679 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtgaaagta 48457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 12517287 - 12517563
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaata 93  Q
    |||||||||||||||||||||||| ||||||||  ||||||| |||||||| || || ||||| |||| |||||||||||||||||||||     ||||     
T  12517287 tttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaatt 12517386  T
Q  94 tgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaa 193  Q
    |||||| ||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| | ||| ||  ||||    
T  12517387 tgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattg-cctcaaaa 12517485  T
Q  194 ctaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    || |||||| | ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  12517486 ctgaaacctccaatcgtgccacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaactctca 12517563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 14807823 - 14807552
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  14807823 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 14807725  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    |||||  ||||||||||| |||| ||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| ||  |||      
T  14807724 gcact-caaaatacgtttatgtttttcgctgccagcgcaccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaact 14807627  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    | |||||| | |||||| |||||||||   ||||| |||||||||||||||||||||||||||||||||||||||    
T  14807626 tgaaacctccaatcgtgtcacgttgcccaaccatcatgccacgattctgcagaaacctgattttaagttaactct 14807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 27827058 - 27826784
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || | ||||||||||| |||||||||||||||||||||     |||| |    
T  27827058 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 27826960  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| |||| |||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||    ||||     
T  27826959 gcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcttcaaaaaa 27826860  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| |||||||||||||||||  || |||||||||||||| |||||| | ||||||||||||||||||||||    
T  27826859 tgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctca 27826784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 27829369 - 27829095
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| || | ||||||||||| |||||||||||||||||||||     |||| |    
T  27829369 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 27829271  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||| ||||||| |||| |||| ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||  |||||   ||||     
T  27829270 gcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcctcaaaaaa 27829171  T
Q  195 taaaaccttcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| |||||||||||||||||  || |||||||||||||| |||||| | ||||||||||||||||||||||    
T  27829170 tgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctca 27829095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 43079492 - 43079349
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||     
T  43079492 cagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgccttgccg 43079393  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43079392 tcgtgccacgattctgcagaaacctgattttaagttaactctca 43079349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 15072782 - 15072508
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  15072782 tttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaattt 15072684  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||| ||||||||||| |||| |||||    |||||    
T  15072683 gcacccaaaaatacgtttctgttattcgctgccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttgcttc-aaaac 15072585  T
Q  195 taaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattc-tgcagaaacctgattttaagttaactctca 270  Q
    | |||||| || ||||| |||||||||  ||||||||| |||||||| ||||||| | ||||||||||||||||||||    
T  15072584 tgaaacctccaatcgtgtcacgttgcccagccatcgtgtcacgattcctgcagaatc-tgattttaagttaactctca 15072508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 43081861 - 43081724
Alignment:
Q  133 accatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgc 232  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||    
T  43081861 accatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccactttgccttgccgtcgtgc 43081762  T
Q  233 cacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43081761 cacgattctgcagaaacctgattttaagttaactctca 43081724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 18812813 - 18812670
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||  |||     
T  18812813 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccg 18812714  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18812713 tcgtgccacgattcttcagaaacctgattttaagttaactctca 18812670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 15068053 - 15067779
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    ||||||||||||||||||||||||| |||||||||| |||||   ||||| || || |||||||||| |||||||||||||||||||||     |||| |    
T  15068053 tttctaaacccttgtttcagccccttctatctcaaa-gtttaggttgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 15067955  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  |||||||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||| || ||||||||||||| |||||    |||||    
T  15067954 gcacccaaaaatacgtttttgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcatgatttttccagtggcttgcttc-aaaac 15067856  T
Q  195 taaaaccttca-tcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| || |||||||| ||||||  |||||| |||||||||| ||||| ||| |||||||||||||||| ||||    
T  15067855 tgaaacctccaatcgtgccatgttgcccagccatcttgccacgattcctgca-aaatctgattttaagttaacactca 15067779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 18810628 - 18810485
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || |||||||||||||| | ||||||||||||||||||| | |||| |||||||| |||||||||||||||||  |||     
T  18810628 cagcgcaccatcgtgccacgatgtgaccccatcgtgccgcaatttttccagtgccttgcctaaaaaaataaaacctccatcgtgccacgttgcccagccg 18810529  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18810528 tcgtgccacgattctgcagaaacctgattttaagttaactctca 18810485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 28251831 - 28252002
Alignment:
Q  2 ttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatg 95  Q
    |||||||||||||||||| ||| |||||||||||| ||||||| ||||| || ||||||||||||| |||||||||||||||||||||     |||| ||    
T  28251831 ttctaaacccttgtttcaacccactctatctcaaa-gtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 28251929  T
Q  96 cactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgat 169  Q
    ||||  |||||||||||||||| ||||||| || | ||||||||| ||||| ||||| ||||||||||||||||    
T  28251930 cact-caaaatacgtttctgtttttcgctgccaacgcaccatcgtaccacgatgcgatcccatcgtgccacgat 28252002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 44720788 - 44720619
Alignment:
Q  101 aaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaac 200  Q
    ||||||| ||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||   |||||| ||||    
T  44720788 aaaaatatgtttctgttttt-gctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtaccttgcctc-aaaactgaaac 44720691  T
Q  201 cttcat-cgtgccacgttgccttgccatcgtgccacgattctgcagaaa-cctgattttaagttaactctca 270  Q
    || ||  ||||||||  ||||  || ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  44720690 ctccaaacgtgccacaatgcccagcaatcatgccacgattctgcagaaaacctgattttaagttaactctca 44720619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2468361 - 2468513
Alignment:
Q  1 tttctaaacccttgtttcagc-ccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||| |||||||||||| |||||||||||||| ||||||| ||||| || ||||||||||||| |||||||||||||||| ||||     |||| |    
T  2468361 tttctaaatccttgtttcagctccctctatctcaaa-gtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatct 2468459  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgtt 148  Q
    ||||| |||||||||||||||||||||||   |||| |||||||||||||||||    
T  2468460 gcactaaaaaatacgtttctgttattcgcatccagcgcaccatcgtgccacgtt 2468513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3886181 - 3886334
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||     ||||||    
T  3886181 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatat 3886279  T
Q  95 gcac---tgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||     ||||||| ||||||||||||||||| |||| ||||||||| |||||    
T  3886280 gcacccaaaaaaaatatgtttctgttattcgctgccagcacaccatcgtaccacg 3886334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4424090 - 4423940
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||| ||||||||||||||| ||||||||||| |||| |||||||| || |||| |||||||| |||||||||||||||||||||     |||| |    
T  4424090 tttctaaatccttgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatct 4423992  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacg 146  Q
    ||||| ||||||| |||||| || ||||||| |||| |||||||||||||||    
T  4423991 gcactcaaaaatatgtttctatttttcgctgccagcgcaccatcgtgccacg 4423940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 28251988 - 28252122
Alignment:
Q  134 ccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttc-atcgtgccacgttgccttgccatcgtgc 232  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||  |||  | |||||| | ||||| ||||||||||| ||||||||||    
T  28251988 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtaccacgttgcctagccatcgtgc 28252086  T
Q  233 cacgatt-ctgcagaaacctgattttaagttaactct 268  Q
    ||||||| |||||| | ||||||||||||||||||||    
T  28252087 cacgattcctgcag-atcctgattttaagttaactct 28252122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44720915 - 44720830
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaat 86  Q
    |||||||||||||||||||||||| ||||||||||| |||| || |||||||| ||||||||||||| ||||||| | |||||||||    
T  44720915 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaat 44720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 3886330 - 3886419
Alignment:
Q  163 ccacgatttttccagtgccttgcc-cagaaaactaaaaccttcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacct 251  Q
    ||||||||||||||||| |||||| || |||||| |||||| ||||||||||||||| |  |||||| || |||||||||||||||||||    
T  3886330 ccacgatttttccagtgtcttgcctcaaaaaactgaaacctccatcgtgccacgttgtccagccatcatgtcacgattctgcagaaacct 3886419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13858747 - 13858823
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||| |||||||||||||||| ||||||||||    
T  13858747 tttctaaacccttgtttcatccccctctatctcaag-gtttactctgatacaaagtctatatttatagtaaaagtatc 13858823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 181608 - 181534
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||| |||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  181608 ttctaagcccttgtttcagccccctctatctcaaa-gtttagtctgatacaaagtctatatttatagtaaaagtat 181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 4423952 - 4423837
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctg 252  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||||| | || |||||||||||||  || || ||||||||||| |||||| | | ||    
T  4423952 ccatcgtgccacgatttttccagtgccttg-ccttaaaactgaaacctccaattgtgccacgttgcccagcaattgtgccacgattcctgcag-atcttg 4423855  T
Q  253 attttaagttaactctca 270  Q
    ||||||||||||||||||    
T  4423854 attttaagttaactctca 4423837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14419454 - 14419530
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||||||||||| ||||||||||  |||||| |||||| || ||||||||||||| ||||||||||    
T  14419454 tttctaaacccttgtttcagccccctctatctcaag-gtttacactgatacaatgtctatatttatagtaaaagtatc 14419530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21482394 - 21482322
Alignment:
Q  1 tttctaaacccttgtttcagccc-ctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||| ||| |||||||||||| ||||||    
T  21482394 tttctaaacccttgtttcagtccactctatctcaaa-gtttactctgatacaaattctatatttatagtaaaag 21482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5372441 - 5372512
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||| || ||||||| ||||| ||||||    
T  5372441 tttctaaacccttgtttcagcccctctatctcaaga-tttacactgatacaatgtctataattatagtaaaag 5372512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18810780 - 18810693
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt 88  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||||| ||  |||||||||||| ||||||| || ||||||||||    
T  18810780 tttctaaacccttgtttcagccccctctatctccaa-gtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaattt 18810693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18812965 - 18812878
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt 88  Q
    |||||||||||||||||||||| |||||||||| || |||| |||||||| ||  |||||||||||| ||||||| || ||||||||||    
T  18812965 tttctaaacccttgtttcagcctcctctatctccaa-gtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaattt 18812878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26775273 - 26775199
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| |||||||||||| || |||| |||||||| |||| ||||||||||| ||||||||    
T  26775273 tttctaaacccttgtttcagccccctctatctc-aaggtttgctctgatacaaagcctatatttatagtaaaagta 26775199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 41384815 - 41384742
Alignment:
Q  2 ttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||||||||||| ||  |||||| ||||  || ||||||||||||| |||||||||    
T  41384815 ttctaaacccttgtttcagcccctctatctc-aatttttactttgattcaaggtctatatttatagtaaaagtat 41384742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15185973 - 15186049
Alignment:
Q  1 tttctaaacccttgtttcagcc-cctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||||||||||| | ||| ||||||||  ||||||||||||| ||||| |||||||||| ||||||||||    
T  15185973 tttctaaacccttgtttcagtcacctttatctcaag-gtttactctgatacaaagtttatatttatagtaaaagtatc 15186049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33541651 - 33541723
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  33541651 tttctaaacccttgtttcagccccctctatctc-aatgtttacactgatacaatgtctatatttatagtaaaag 33541723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35872641 - 35872713
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || ||||||||||||| ||||||    
T  35872641 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgtctatatttatagtaaaag 35872713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43530200 - 43530121
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||||||| ||||||||    ||||||| |||||||| || ||||||||||||| |||||||||    
T  43530200 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 43530121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1225238 - 1225164
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| || | ||||||||||| ||||||||    
T  1225238 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaatgcctatatttatagtaaaagta 1225164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 41382744 - 41382670
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||| |||||| ||||||||||  ||||||||||||  || ||||||||||||| |||||||||    
T  41382744 ttctaaacccttgttttagccccatctatctcaag-gtttactctgattcaaggtctatatttatagtaaaagtat 41382670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3874082 - 3874003
Alignment:
Q  1 tttctaaacccttgtttcagcccct-ctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||||  |||||||    ||||||||  |||||| |||||||||||||||| |||||||||    
T  3874082 tttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaagtctatatttatagtaaaagtat 3874003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5623001 - 5623073
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || ||||| ||||||| |||  ||||||||||| ||||||    
T  5623001 tttctaaacccttgtttcagccccctctatctc-aaggtttattctgatacaaaacctatatttatagtaaaag 5623073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14477348 - 14477276
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||| |||| ||||||||||  |||| |||||||| |||| ||||||||||| ||||||    
T  14477348 tttctaaacccttgtttcaaccccctctatctcaag-gtttgctctgatacaaagcctatatttatagtaaaag 14477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25952593 - 25952521
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||| |||||||| ||||  |||||||||| ||||||    
T  25952593 tttctaaacccttgtttcagccccctctatctc-aaggtttcctctgatacaaagcttatatttatagtaaaag 25952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27107160 - 27107232
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||  |||||| || ||||||||||||| ||||||    
T  27107160 tttctaaacccttgtttcagccccctctatctc-aaggtttatactgatacaatgtctatatttatagtaaaag 27107232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32339381 - 32339302
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctc---aaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||| ||||||||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  32339381 tttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 32339302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 9021590 - 9021636
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  9021590 ccatcgtggcacgattctccagaattctgattttaagttaactctca 9021636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15809291 - 15809212
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    |||||||||||||||||||||||| | ||||||    ||||||||  |||||| || ||||||||||||| |||||||||    
T  15809291 tttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 15809212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30480766 - 30480838
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    ||||||||||||||||||| |||| |||||||| || |||||| || ||| || ||||||||||||| ||||||    
T  30480766 tttctaaacccttgtttcaaccccttctatctc-aaggtttacactaatacaatgtctatatttatagtaaaag 30480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36865610 - 36865538
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttac-tctgatataaagtctatatttataataaaa 72  Q
    |||||||||||||||||||| |||||||||||  || |||||| ||||||| || ||||||||||||| |||||    
T  36865610 tttctaaacccttgtttcagccccctctatct-taaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 6376025 - 6375985
Alignment:
Q  37 gtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||| || ||||||||||||| ||||||||||    
T  6376025 gtttactctgatacaaggtctatatttatagtaaaagtatc 6375985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 27911086 - 27911011
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||||| |||||||||||| || ||||||  ||||| || ||| ||||||||  ||||||||||    
T  27911086 ttctaaacccttgtttcagccccctctatctc-aaggtttacattgatacaatgtcaatatttattgtaaaagtatc 27911011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 27957505 - 27957430
Alignment:
Q  2 ttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    ||||||||||||||||||| |||||||||||| || ||||||  ||||| || ||| ||||||||  ||||||||||    
T  27957505 ttctaaacccttgtttcagccccctctatctc-aaggtttacattgatacaatgtcaatatttattgtaaaagtatc 27957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 12909 - 13052
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||    
T  12909 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgccttgaca 13008  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13009 tcgtgccacgattctgcagaaacctgattttaagttaactctca 13052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 2905 - 2631
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||||||| ||||||| |||||||||||||     |||| |    
T  2905 tttctaaacccttgtttcagccccctctatctcaaa-gtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 2807  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  |||||||||||| |||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| ||  |||||    
T  2806 gcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg-cctcaaaac 2708  T
Q  195 taaaaccttc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||||| | ||||||||||||||||| || |||||| ||| ||| |||||| | | ||||||||||||||||||||    
T  2707 tgaaacctccaatcgtgccacgttgcctagcaatcgtgtcacaattcctgcag-atcttgattttaagttaactctca 2631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 69554 - 69829
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaa 91  Q
    |||||||||||||||||||||||| ||||||||    ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||     |||    
T  69554 tttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaa 69653  T
Q  92 tatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaa 191  Q
    | |||||  |||| || ||||||||| ||||||| |||| ||||||||||| ||| ||||| ||||| |||| |||||||||||||||| |||||   ||    
T  69654 tctgcacccaaaa-tatgtttctgtttttcgctgccagcacaccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgctttgcctc-aa 69751  T
Q  192 aactaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactct 268  Q
    |  | |||||| || |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  69752 acttgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcagaaatctgattttaagttaactct 69829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 73427 - 73540
Alignment:
Q  155 ccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttca-tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 253  Q
    |||||||||||| ||||||||||||| |||||   |||  | |||||| || |||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  73427 ccatcgtgccacaatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcataaatctga 73525  T
Q  254 ttttaagttaactct 268  Q
    |||||||||||||||    
T  73526 ttttaagttaactct 73540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 73286 - 73438
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctca---aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaa 91  Q
    |||||||||||||||||||||||| ||||||||    ||||||| || ||||| |  ||||||||||||| |||||||||| ||||||||||     |||    
T  73286 tttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaa 73385  T
Q  92 tatgcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccac 145  Q
    | |||||   |||||| ||||||||| ||||||| |||| ||||||||||||||    
T  73386 tctgcac-ccaaaatatgtttctgtttttcgctgccagcacaccatcgtgccac 73438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 15044 - 14769
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||| | ||||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||||     |||| |    
T  15044 tttctaaatcattgtttcagccccctctatctcaaa-gtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 14946  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaac 194  Q
    ||||  ||||||| ||||||||||||||||| |||| |||||||||| ||||||| || |||||||||||||||  ||||||||| |||| ||  | |||    
T  14945 gcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttg-cctcataac 14847  T
Q  195 taaaacct-tcatcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 270  Q
    | |||| |  |||||| |||||||||| | | |||||||||||||| |||||||| ||||||||||||||||||||||    
T  14846 tgaaacttcccatcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactctca 14769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 22060 - 21917
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  22060 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctg 21961  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  21960 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 21917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 24335 - 24192
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||  |||  ||      
T  24335 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctg 24236  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  24235 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 24192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 6072 - 5929
Alignment:
Q  127 cagcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgccttgcccagaaaactaaaaccttcatcgtgccacgttgccttgcca 226  Q
    |||| ||||||||||||| | || ||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||  |||  |||     
T  6072 cagcgcaccatcgtgccatgatgagaccccatcatgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccgcgaagcccagccg 5973  T
Q  227 tcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  5972 tcgtgccacgattgtgcagaaacctgattttaagttaactctca 5929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6224 - 6151
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagt 74  Q
    |||||||||||||||||||| |||||||||||| ||||||| || ||||| || ||||||||||||| |||||||    
T  6224 tttctaaacccttgtttcagccccctctatctc-aaagtttgctttgatacaaggtctatatttatagtaaaagt 6151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 29153 - 29001
Alignment:
Q  34 aaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatatgcactgaaaaatacgtttctgttattcgctgtca 128  Q
    ||||||||  |||||| || ||||||||||||| ||||||| | |||||||||||     |||| |||||| ||||||| ||||||||| ||||||| ||    
T  29153 aaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgcca 29054  T
Q  129 gcccaccatcgtgccacgttgcgaccccatcgtgccacgatttttccagtgcc 181  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29053 gcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 29001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 29005 - 28943
Alignment:
Q  208 gtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctca 28943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4022 - 3868
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatcgcttaaaattt-----aaatat 94  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||||| ||||||||| |||||||||||     |||| |    
T  4022 tttctaaacccttgtttcagccccctctatctcaaa-gtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatct 3924  T
Q  95 gcactgaaaaatacgtttctgttattcgctgtcagcccaccatcgtgccacgttgc 150  Q
    ||||  |||||||||||| |||||||||||| || | |||||||||||||||||||    
T  3923 gcacccaaaaatacgtttatgttattcgctgccatcgcaccatcgtgccacgttgc 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 183903 - 183976
Alignment:
Q  1 tttctaaacccttgtttcagcccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||| || ||||||||||||| | ||||||    
T  183903 tttctaaacctttgtttcagcccttctatctc-aaagtttactctgatacaaggtctatatttatagtgaaagta 183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 52035 - 51959
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctca-aaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||||||||| ||||||||  |||||||| | ||||| || ||||||||||||| |||||||||    
T  52035 ttctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagtat 51959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1094 - 1168
Alignment:
Q  1 tttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  1094 tttctaaacccttgtttcagccccttctatctc-aaagtttgctctgatacaaggtctatatttatagtgaaagta 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 1302 - 1347
Alignment:
Q  225 catcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||    
T  1302 catcgtggcacgattctccagaattctgattttaagttaactctca 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41746 - 41820
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagta 75  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| || ||||||||||||| | ||||||    
T  41746 tttctaaacccttgtttcagccccctctatctc-taagtttgctctgatacaaggtctatatttatagtgaaagta 41820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 41974 - 42020
Alignment:
Q  224 ccatcgtgccacgattctgcagaaacctgattttaagttaactctca 270  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  41974 ccatcgtggcacgattcttcagaattctgattttaagttaactctca 42020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 79884 - 79812
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaag 73  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||| |||  ||||||||||| ||||||    
T  79884 tttctaaacccttgtttcagccccctctatctc-aaggtttacactgatacaaaaactatatttatagtaaaag 79812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 16082 - 16157
Alignment:
Q  2 ttctaaacccttgtttcagcccc-tctatctcaaaagtttactctgatataaagtctatatttataataaaagtatc 77  Q
    |||||||||||| ||||| |||| ||||||| ||  ||||||||||||| ||| |||||||||||| ||||||||||    
T  16082 ttctaaacccttatttcaaccccctctatcttaag-gtttactctgatacaaaatctatatttatagtaaaagtatc 16157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 79210 - 79135
Alignment:
Q  1 tttctaaacccttgtttcag-cccctctatctcaaaagtttactctgatataaagtctatatttataataaaagtat 76  Q
    ||||||||||||||||| || |||||||||||| ||  |||||||||||  || ||||||||||||| |||| ||||    
T  79210 tttctaaacccttgttttagccccctctatctc-aagttttactctgattcaaggtctatatttatagtaaaggtat 79135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University