View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19795_low_27 (Length: 269)
Name: NF19795_low_27
Description: NF19795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19795_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 2119351 - 2119577
Alignment:
| Q |
14 |
atatatttaacgtgttaaacatatagatctatattaatttacaaggagatgaaaaatcaagccatcttatattatttgtagttgatctagacattagtaa |
113 |
Q |
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| T |
2119351 |
atatatttaacgtgttaaacatatagatctatattaattgacaaggagatgaata-tcaagccatcttatattatttgtagttgatctagacattagtaa |
2119449 |
T |
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| Q |
114 |
ggactaaagagatgaattatctttattacatctatatactttaaaaattaaagtaataagttataatttaaaaactaaactgatggtttatctttatttt |
213 |
Q |
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| T |
2119450 |
ggactaaagtgatgaattatctttattacatctatatactttaaaaattaaagtaataagttataatttaaaaactaaactgatggtttatctttatttt |
2119549 |
T |
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| Q |
214 |
ttcatattgtttccataatttgagttaa |
241 |
Q |
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| T |
2119550 |
ttcatattgtttccataatttgagttaa |
2119577 |
T |
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