View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19795_low_37 (Length: 244)
Name: NF19795_low_37
Description: NF19795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19795_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 17747300 - 17747526
Alignment:
| Q |
1 |
ctgctgatcacacaccaagaaaattaaattatttattacccgtggcattaattaacctatcatatttcatataaatccaaaaccagacattaaaaattga |
100 |
Q |
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| T |
17747300 |
ctgctgatcacacaccaagaaaattaaattatttattacccgtggcattaattaacctatcatatttcatataaatccaaaaccagacattaaaaattga |
17747399 |
T |
|
| Q |
101 |
caaatactagtattatacaccacaattttaagcaaacataagataactggtagaaattaaataggtctgaggaccccatgttatagtggctttcttggcg |
200 |
Q |
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| T |
17747400 |
caaatactagtattatacaccacaattttaagcaaacataagataactggtagaaattaaataggtctgaggaccccatgttatagtggctttcttggcg |
17747499 |
T |
|
| Q |
201 |
tttaatcaagttacttaaccgacattg |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
17747500 |
tttaatcaagttacttaaccgacattg |
17747526 |
T |
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