View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19795_low_38 (Length: 238)
Name: NF19795_low_38
Description: NF19795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19795_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 23870760 - 23870981
Alignment:
| Q |
1 |
gttgcttttcttgctttccaaataattgaaatgtttgaaaactaaattacccttaacttctctgtagccnnnnnnnatcaccattccctagttctttgaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
23870760 |
gttgcttttcttgctttccaaataattgaaatgtttgaaaactaaattacccttaacttctctgtagcctttttttatcaccattccctagttctttgaa |
23870859 |
T |
|
| Q |
101 |
cagtcaattgtaaaatgaaaaaagagatattttcagtttcaattgtaccacagcctcctatgcaaaatataaaatcattcaatttaatctctcttttgtt |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
23870860 |
cagtcaattgtaaaatgaaaaaagagatattttcagtttcaattgtaccacagcctcctatgcaaaatataaaatcattcaatttaatccctcttttgtt |
23870959 |
T |
|
| Q |
201 |
taagttgtcccttcgtataaat |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
23870960 |
taagttgtcccttcgtataaat |
23870981 |
T |
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