View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19800_high_29 (Length: 239)
Name: NF19800_high_29
Description: NF19800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19800_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26355067 - 26354849
Alignment:
| Q |
1 |
attgacaatcacatgatgaatacctggtggccaagcatttggagcaataggaagcttgaatgtggtgtcaatgggacgggatcggaattgctttctcttg |
100 |
Q |
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| T |
26355067 |
attgacaatcacatgatgaatacctggtggccaagcatttggagcaacaggaagcttgaatgtggtgtcaatgggacgggatcggaattgctttctcttg |
26354968 |
T |
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| Q |
101 |
aagagattatgtacacaacaacatgaagaagaaagacaattatccattgtctgagttttcaagtgaagaatgtgtaaatgtacaaggaggaattttgcat |
200 |
Q |
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|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26354967 |
aagagattatctacacaacaacatga---agaaagacaattatccattgtctgagttttcaagtgaagaatgtgtaaatgtacaaggaggaattttgcat |
26354871 |
T |
|
| Q |
201 |
ttatgtgggaagtagcgattat |
222 |
Q |
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|||||||||||||||||||||| |
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|
| T |
26354870 |
ttatgtgggaagtagcgattat |
26354849 |
T |
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