View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19800_high_33 (Length: 237)
Name: NF19800_high_33
Description: NF19800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19800_high_33 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 38 - 219
Target Start/End: Complemental strand, 37334018 - 37333837
Alignment:
| Q |
38 |
ccttgctgaaatgtaagggaccttgcttacctttaattcacagtactgttgcatctttttggcttgagccattgctgtcttaaaactctcctttttatat |
137 |
Q |
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| T |
37334018 |
ccttgctgaaatgtaagggaccttgcttacctttaattcacagtactgttgcatctttttggcttgagccattgctgtcttaaaactctcctttttatat |
37333919 |
T |
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| Q |
138 |
ccttggccgtttcttatcatgcatacaactctactaaaatccttcttctggtatagggcaatgcaaactgcaggaagattgt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37333918 |
ccttggccgtttcttatcatgcatacaactctactaaaatccttcttctggtatagggcaatgcaaactgcaggaagattgt |
37333837 |
T |
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