View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19800_high_34 (Length: 234)
Name: NF19800_high_34
Description: NF19800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19800_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 19576725 - 19576927
Alignment:
| Q |
14 |
catcactatacctctcatcactcaacctctcgtgcacaaattgatcggtcaacgccacacacgctaaccaaagcaattcatcggtattcctcctcagaaa |
113 |
Q |
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| T |
19576725 |
catcactatacctctcatcactcaacctctcgtgcacaaattgatcggtcaacgccacacacgctaaccaaagcaattcatcggtattcctcctcagaaa |
19576824 |
T |
|
| Q |
114 |
atgagctagctcatacatcaaacaccctgaaggcttcccatgaaacgtccccaatccataatactctttcttcttcttcctatacattttcaccggatct |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19576825 |
atgagctagctcatacatcaaacaccctgaaggcttcccatgaaacgtccccaatccataatactctttcttcttcttcctatacattttcaccggatct |
19576924 |
T |
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| Q |
214 |
tga |
216 |
Q |
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||| |
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| T |
19576925 |
tga |
19576927 |
T |
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