View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19802_high_6 (Length: 267)
Name: NF19802_high_6
Description: NF19802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19802_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 39934355 - 39934612
Alignment:
| Q |
1 |
aaatatcatgtaaaagtcaatctaatgcaatgnnnnnnnnttaaaattatcctattggacatcattttatgaaataattaaacaattgtcacgcaaatgt |
100 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39934355 |
aaatatcatgtaaaagtcaatctaatgcaatgaaaaaaaattaaaattatcctattggacatcattttatgaaataattaaacaattgtcacgcaaatgt |
39934454 |
T |
|
| Q |
101 |
aatcacactactcgttgagttccccatatgcattactcctttaatccatacttctacaggtctttcttaacgaggagtcaactaagtttctttcacataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
39934455 |
aatcacactactcgttgagttccccatatgcattactcctttaatccatacttctacaggtctttcttaatgaggagtcaactaagtttctttcacataa |
39934554 |
T |
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| Q |
201 |
tcaacaaacatgttgcaaccaacacatgtttgttcaaacttttgcaaccgttgatgat |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39934555 |
tcaacaaacatgttgcaaccaacacatgtttgttcaaacttttgcaaccgttgttgat |
39934612 |
T |
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