View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19802_low_1 (Length: 589)

Name: NF19802_low_1
Description: NF19802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19802_low_1
NF19802_low_1
[»] chr4 (67 HSPs)
chr4 (412-566)||(4634382-4634536)
chr4 (412-566)||(23067709-23067863)
chr4 (412-565)||(14542374-14542527)
chr4 (412-566)||(46716755-46716909)
chr4 (412-566)||(9661952-9662106)
chr4 (412-566)||(32189079-32189232)
chr4 (412-565)||(9474401-9474554)
chr4 (416-566)||(42972141-42972291)
chr4 (417-566)||(30469984-30470132)
chr4 (412-566)||(37869278-37869432)
chr4 (412-562)||(34115521-34115666)
chr4 (412-566)||(41486674-41486828)
chr4 (412-566)||(31601217-31601373)
chr4 (412-555)||(15729853-15729996)
chr4 (412-554)||(46728793-46728935)
chr4 (445-566)||(53903713-53903834)
chr4 (412-555)||(50003048-50003191)
chr4 (453-564)||(52555603-52555714)
chr4 (412-566)||(20961548-20961701)
chr4 (445-566)||(54420601-54420723)
chr4 (417-562)||(30416458-30416603)
chr4 (412-555)||(43156875-43157019)
chr4 (413-555)||(29474200-29474343)
chr4 (433-555)||(14346551-14346673)
chr4 (412-549)||(12519755-12519892)
chr4 (412-555)||(51646192-51646336)
chr4 (412-555)||(38434698-38434841)
chr4 (412-554)||(1125040-1125182)
chr4 (417-535)||(40859778-40859896)
chr4 (412-554)||(46775730-46775871)
chr4 (436-565)||(3169549-3169678)
chr4 (414-554)||(28990399-28990539)
chr4 (412-530)||(44375161-44375279)
chr4 (429-554)||(16991988-16992113)
chr4 (412-564)||(6789739-6789891)
chr4 (412-555)||(6408542-6408686)
chr4 (415-555)||(29589233-29589373)
chr4 (415-555)||(46386646-46386786)
chr4 (420-566)||(7242630-7242776)
chr4 (434-555)||(26576375-26576495)
chr4 (412-555)||(29576993-29577137)
chr4 (412-555)||(2945236-2945379)
chr4 (412-555)||(4959446-4959588)
chr4 (412-574)||(4622562-4622724)
chr4 (412-555)||(1657438-1657581)
chr4 (436-549)||(1645433-1645546)
chr4 (445-547)||(9549571-9549673)
chr4 (412-562)||(38170025-38170174)
chr4 (412-562)||(33020792-33020940)
chr4 (412-484)||(44021514-44021586)
chr4 (412-470)||(30416578-30416636)
chr4 (270-324)||(32188922-32188976)
chr4 (268-309)||(9474664-9474705)
chr4 (266-325)||(28588476-28588536)
chr4 (412-554)||(5388614-5388756)
chr4 (412-531)||(9781704-9781821)
chr4 (433-559)||(29257345-29257471)
chr4 (415-554)||(35658404-35658542)
chr4 (412-470)||(40859745-40859803)
chr4 (503-548)||(10665748-10665793)
chr4 (503-548)||(10879893-10879938)
chr4 (269-309)||(37869571-37869611)
chr4 (499-554)||(44021454-44021509)
chr4 (492-566)||(31311647-31311721)
chr4 (503-548)||(17219943-17219988)
chr4 (503-548)||(22066967-22067012)
chr4 (502-555)||(36804442-36804495)
[»] chr7 (56 HSPs)
chr7 (412-566)||(40775366-40775520)
chr7 (412-566)||(135006-135160)
chr7 (412-566)||(7985991-7986145)
chr7 (412-566)||(26017519-26017673)
chr7 (412-549)||(47749833-47749970)
chr7 (412-566)||(24475441-24475594)
chr7 (412-566)||(8611485-8611638)
chr7 (412-566)||(11001943-11002096)
chr7 (412-566)||(24470493-24470646)
chr7 (412-566)||(42490802-42490956)
chr7 (412-566)||(43807011-43807165)
chr7 (412-566)||(49167025-49167178)
chr7 (412-554)||(30992696-30992838)
chr7 (412-566)||(40476807-40476960)
chr7 (412-566)||(8319414-8319568)
chr7 (412-555)||(25855092-25855235)
chr7 (412-566)||(23732254-23732408)
chr7 (412-555)||(28015456-28015599)
chr7 (412-555)||(772542-772685)
chr7 (412-555)||(5024928-5025071)
chr7 (464-566)||(19895545-19895647)
chr7 (412-549)||(14707682-14707819)
chr7 (445-566)||(37399730-37399851)
chr7 (416-554)||(44681563-44681701)
chr7 (412-555)||(9933946-9934085)
chr7 (445-562)||(39090220-39090337)
chr7 (412-535)||(13008565-13008688)
chr7 (429-562)||(10250348-10250481)
chr7 (412-566)||(47156491-47156638)
chr7 (412-562)||(21552320-21552470)
chr7 (434-541)||(22751559-22751666)
chr7 (412-558)||(46918499-46918644)
chr7 (445-562)||(41748392-41748509)
chr7 (412-562)||(43483699-43483837)
chr7 (440-547)||(24045160-24045267)
chr7 (412-555)||(29804551-29804690)
chr7 (412-555)||(38649231-38649372)
chr7 (429-565)||(35135046-35135181)
chr7 (491-562)||(33530340-33530411)
chr7 (463-549)||(37890367-37890453)
chr7 (435-555)||(34893233-34893351)
chr7 (412-472)||(14734004-14734064)
chr7 (412-555)||(21329170-21329311)
chr7 (412-527)||(23177483-23177598)
chr7 (412-562)||(34594387-34594537)
chr7 (504-562)||(2532132-2532190)
chr7 (412-553)||(32312666-32312807)
chr7 (412-555)||(45949551-45949692)
chr7 (412-484)||(15123923-15123995)
chr7 (445-548)||(36350300-36350403)
chr7 (412-523)||(16263486-16263589)
chr7 (412-471)||(24350914-24350972)
chr7 (412-471)||(28476183-28476241)
chr7 (276-325)||(35141892-35141941)
chr7 (412-477)||(43098676-43098741)
chr7 (413-469)||(35363024-35363080)
[»] chr6 (39 HSPs)
chr6 (412-566)||(23843285-23843439)
chr6 (412-566)||(13233969-13234123)
chr6 (412-566)||(12576342-12576495)
chr6 (412-566)||(19759887-19760041)
chr6 (412-566)||(11426041-11426194)
chr6 (412-566)||(20845107-20845261)
chr6 (412-570)||(548723-548881)
chr6 (412-554)||(7049344-7049486)
chr6 (412-566)||(32457745-32457898)
chr6 (412-545)||(31748056-31748189)
chr6 (412-565)||(8633058-8633206)
chr6 (412-566)||(16913427-16913578)
chr6 (412-535)||(10744682-10744805)
chr6 (412-564)||(32804394-32804546)
chr6 (412-562)||(4663685-4663835)
chr6 (434-566)||(1944217-1944349)
chr6 (452-559)||(20496332-20496439)
chr6 (415-558)||(5544809-5544952)
chr6 (412-562)||(33541396-33541544)
chr6 (445-555)||(31804352-31804462)
chr6 (412-484)||(5417141-5417213)
chr6 (416-555)||(34020708-34020845)
chr6 (440-555)||(15128001-15128116)
chr6 (412-543)||(22530379-22530509)
chr6 (440-544)||(904395-904499)
chr6 (443-555)||(8644375-8644487)
chr6 (412-520)||(33194704-33194812)
chr6 (412-466)||(15128114-15128168)
chr6 (269-325)||(20844926-20844982)
chr6 (436-537)||(12652087-12652188)
chr6 (511-555)||(892482-892526)
chr6 (412-471)||(545985-546043)
chr6 (412-471)||(1523363-1523421)
chr6 (519-566)||(5417085-5417132)
chr6 (413-476)||(32574536-32574599)
chr6 (412-518)||(891687-891793)
chr6 (464-530)||(20744977-20745043)
chr6 (268-309)||(7049165-7049206)
chr6 (412-476)||(30776627-30776690)
[»] chr3 (56 HSPs)
chr3 (412-566)||(43029782-43029936)
chr3 (412-566)||(1165257-1165411)
chr3 (412-566)||(28995170-28995323)
chr3 (412-566)||(3088525-3088678)
chr3 (412-569)||(29182468-29182623)
chr3 (412-566)||(41882271-41882424)
chr3 (412-566)||(22286612-22286765)
chr3 (412-566)||(45664320-45664474)
chr3 (433-566)||(50519904-50520036)
chr3 (412-564)||(54240185-54240337)
chr3 (412-566)||(33977786-33977939)
chr3 (412-566)||(47914454-47914608)
chr3 (413-566)||(20200919-20201072)
chr3 (413-566)||(20203101-20203254)
chr3 (412-554)||(20251756-20251898)
chr3 (412-566)||(43839378-43839533)
chr3 (412-562)||(913181-913331)
chr3 (412-566)||(21803629-21803784)
chr3 (412-555)||(22844151-22844294)
chr3 (412-554)||(35501632-35501774)
chr3 (413-562)||(40797133-40797282)
chr3 (415-566)||(7656381-7656527)
chr3 (448-566)||(11846684-11846801)
chr3 (412-554)||(32237869-32238011)
chr3 (412-555)||(4019694-4019840)
chr3 (412-518)||(14741234-14741340)
chr3 (418-555)||(42106245-42106380)
chr3 (412-558)||(29776559-29776705)
chr3 (412-554)||(32089803-32089945)
chr3 (412-555)||(25939351-25939494)
chr3 (412-554)||(21585998-21586140)
chr3 (412-555)||(22893587-22893730)
chr3 (448-566)||(33076419-33076538)
chr3 (412-555)||(53426897-53427040)
chr3 (412-549)||(36540552-36540688)
chr3 (412-549)||(40461873-40462010)
chr3 (412-565)||(34767084-34767238)
chr3 (422-554)||(39340308-39340440)
chr3 (412-548)||(40365325-40365459)
chr3 (412-553)||(1220124-1220262)
chr3 (445-562)||(37051728-37051843)
chr3 (412-547)||(50460290-50460424)
chr3 (489-549)||(48060967-48061027)
chr3 (444-559)||(2598210-2598324)
chr3 (503-569)||(27831289-27831355)
chr3 (441-549)||(43242936-43243044)
chr3 (412-547)||(33070253-33070388)
chr3 (412-470)||(27706304-27706361)
chr3 (413-470)||(42106212-42106269)
chr3 (269-309)||(21803449-21803489)
chr3 (412-484)||(25374013-25374085)
chr3 (412-471)||(7546567-7546625)
chr3 (503-554)||(25373955-25374006)
chr3 (491-555)||(26412466-26412532)
chr3 (494-554)||(35670594-35670654)
chr3 (412-476)||(51923680-51923743)
[»] chr2 (67 HSPs)
chr2 (412-566)||(7640217-7640371)
chr2 (412-566)||(25771544-25771698)
chr2 (412-566)||(27024000-27024154)
chr2 (412-566)||(43566973-43567126)
chr2 (412-566)||(5930522-5930676)
chr2 (416-549)||(44951522-44951655)
chr2 (412-566)||(27191198-27191351)
chr2 (412-566)||(27841012-27841165)
chr2 (412-566)||(36508029-36508182)
chr2 (412-566)||(25516592-25516745)
chr2 (412-541)||(16879851-16879980)
chr2 (412-541)||(16991984-16992113)
chr2 (412-564)||(38822172-38822323)
chr2 (412-566)||(6089990-6090143)
chr2 (424-566)||(41176970-41177111)
chr2 (420-566)||(43929161-43929307)
chr2 (412-566)||(44167572-44167725)
chr2 (445-566)||(3465061-3465182)
chr2 (412-566)||(3390531-3390676)
chr2 (412-564)||(3603084-3603236)
chr2 (420-555)||(4878608-4878743)
chr2 (412-562)||(7443431-7443581)
chr2 (417-562)||(10589199-10589344)
chr2 (417-566)||(16720709-16720858)
chr2 (412-555)||(19580874-19581017)
chr2 (412-555)||(26491401-26491543)
chr2 (412-549)||(24500586-24500723)
chr2 (412-554)||(25622917-25623060)
chr2 (416-555)||(37883756-37883895)
chr2 (412-555)||(29734289-29734432)
chr2 (412-555)||(29812487-29812629)
chr2 (420-555)||(13268679-13268814)
chr2 (413-555)||(28228322-28228464)
chr2 (446-555)||(15673840-15673949)
chr2 (413-549)||(25237209-25237340)
chr2 (412-562)||(2251212-2251360)
chr2 (412-555)||(9715416-9715559)
chr2 (463-555)||(20036532-20036624)
chr2 (415-554)||(19953672-19953810)
chr2 (434-555)||(11550467-11550589)
chr2 (412-562)||(5071235-5071385)
chr2 (415-554)||(17068789-17068927)
chr2 (423-554)||(17118687-17118817)
chr2 (412-562)||(35353742-35353889)
chr2 (412-483)||(41842047-41842118)
chr2 (415-554)||(17074786-17074924)
chr2 (412-522)||(40125488-40125598)
chr2 (415-554)||(17095359-17095497)
chr2 (412-467)||(43929316-43929371)
chr2 (412-562)||(3397844-3397994)
chr2 (422-470)||(10589176-10589224)
chr2 (464-555)||(42105637-42105727)
chr2 (417-467)||(43929288-43929338)
chr2 (494-559)||(802956-803021)
chr2 (269-325)||(3602904-3602960)
chr2 (412-504)||(11931013-11931105)
chr2 (412-472)||(31269050-31269110)
chr2 (487-562)||(31125244-31125319)
chr2 (412-497)||(44562561-44562644)
chr2 (510-559)||(15786435-15786484)
chr2 (501-557)||(45033151-45033207)
chr2 (413-460)||(16720871-16720918)
chr2 (451-554)||(17056342-17056444)
chr2 (451-554)||(17084325-17084427)
chr2 (500-555)||(31262825-31262880)
chr2 (436-466)||(16720837-16720867)
chr2 (502-559)||(32347551-32347607)
[»] chr8 (61 HSPs)
chr8 (412-565)||(8054669-8054822)
chr8 (412-566)||(44295415-44295569)
chr8 (412-566)||(14115689-14115843)
chr8 (412-544)||(9270120-9270252)
chr8 (412-566)||(16996750-16996903)
chr8 (412-562)||(32412889-32413039)
chr8 (412-566)||(41996644-41996796)
chr8 (412-566)||(5457170-5457324)
chr8 (412-566)||(9992766-9992920)
chr8 (412-566)||(37129536-37129688)
chr8 (412-547)||(32104718-32104853)
chr8 (412-538)||(31874183-31874309)
chr8 (420-555)||(31712948-31713083)
chr8 (412-554)||(37659065-37659207)
chr8 (412-555)||(36545653-36545796)
chr8 (413-549)||(26937625-26937761)
chr8 (413-562)||(15665639-15665788)
chr8 (412-555)||(12248583-12248729)
chr8 (412-555)||(3925562-3925705)
chr8 (412-559)||(5989729-5989876)
chr8 (412-555)||(16937211-16937354)
chr8 (412-555)||(17019217-17019360)
chr8 (412-555)||(17549654-17549797)
chr8 (454-555)||(5328095-5328194)
chr8 (413-547)||(10042872-10043006)
chr8 (412-555)||(2629011-2629153)
chr8 (412-559)||(12244084-12244231)
chr8 (412-562)||(32256586-32256736)
chr8 (412-555)||(5917621-5917757)
chr8 (412-562)||(32061893-32062043)
chr8 (441-555)||(23766867-23766982)
chr8 (412-539)||(14327578-14327705)
chr8 (412-555)||(1215213-1215354)
chr8 (416-562)||(27534277-27534423)
chr8 (412-554)||(7281001-7281142)
chr8 (420-559)||(13864466-13864605)
chr8 (412-526)||(7269365-7269479)
chr8 (433-561)||(11298626-11298754)
chr8 (461-546)||(13977556-13977641)
chr8 (412-520)||(3681022-3681130)
chr8 (412-562)||(18190711-18190859)
chr8 (412-524)||(26582792-26582903)
chr8 (420-483)||(16808983-16809046)
chr8 (413-559)||(16938145-16938285)
chr8 (412-471)||(18890774-18890832)
chr8 (412-481)||(6833579-6833648)
chr8 (466-555)||(37719993-37720082)
chr8 (412-472)||(15827109-15827169)
chr8 (499-555)||(18994075-18994131)
chr8 (412-476)||(32920751-32920815)
chr8 (271-310)||(2628877-2628916)
chr8 (445-554)||(31147701-31147811)
chr8 (412-471)||(39657410-39657468)
chr8 (414-483)||(284422-284491)
chr8 (414-483)||(631386-631455)
chr8 (414-483)||(817198-817267)
chr8 (413-470)||(12356919-12356976)
chr8 (272-309)||(15237790-15237827)
chr8 (281-325)||(12244357-12244401)
chr8 (269-305)||(14115951-14115987)
chr8 (503-555)||(14919261-14919313)
[»] scaffold0316 (1 HSPs)
scaffold0316 (412-566)||(12064-12218)
[»] chr1 (57 HSPs)
chr1 (412-566)||(22344773-22344927)
chr1 (414-566)||(21326574-21326726)
chr1 (412-549)||(23320539-23320676)
chr1 (412-566)||(12967593-12967747)
chr1 (412-562)||(44562614-44562764)
chr1 (412-565)||(4564616-4564768)
chr1 (412-566)||(5832333-5832487)
chr1 (412-566)||(23257187-23257341)
chr1 (412-566)||(15276307-15276465)
chr1 (412-566)||(38644658-38644812)
chr1 (412-566)||(38646683-38646837)
chr1 (412-566)||(630645-630799)
chr1 (412-566)||(28213147-28213301)
chr1 (445-554)||(45659146-45659255)
chr1 (412-566)||(15698299-15698451)
chr1 (445-566)||(14717131-14717252)
chr1 (412-566)||(36621451-36621605)
chr1 (445-566)||(6212775-6212896)
chr1 (412-555)||(52839629-52839772)
chr1 (412-548)||(27469587-27469723)
chr1 (412-555)||(11121075-11121218)
chr1 (412-562)||(49651943-49652084)
chr1 (413-554)||(26199680-26199821)
chr1 (454-555)||(44513874-44513975)
chr1 (412-555)||(32539061-32539205)
chr1 (412-559)||(33177466-33177612)
chr1 (412-555)||(33703382-33703525)
chr1 (433-547)||(10264829-10264943)
chr1 (433-561)||(48654907-48655035)
chr1 (412-555)||(10877445-10877588)
chr1 (412-554)||(8893392-8893534)
chr1 (412-538)||(12147937-12148063)
chr1 (412-483)||(1768065-1768135)
chr1 (431-566)||(47392256-47392389)
chr1 (423-555)||(22031963-22032095)
chr1 (412-548)||(29067148-29067284)
chr1 (412-562)||(2350721-2350871)
chr1 (412-561)||(34566787-34566934)
chr1 (412-555)||(37684962-37685105)
chr1 (412-555)||(37700412-37700555)
chr1 (445-535)||(46589279-46589369)
chr1 (412-475)||(52752122-52752185)
chr1 (413-554)||(13969513-13969657)
chr1 (445-566)||(900226-900346)
chr1 (412-483)||(40488341-40488412)
chr1 (445-504)||(40992440-40992499)
chr1 (494-555)||(34659513-34659574)
chr1 (506-560)||(37662403-37662457)
chr1 (269-325)||(14717381-14717437)
chr1 (415-472)||(30853744-30853801)
chr1 (502-562)||(27356618-27356678)
chr1 (269-325)||(15276570-15276628)
chr1 (412-471)||(16161795-16161853)
chr1 (271-309)||(40992287-40992325)
chr1 (494-555)||(8224355-8224416)
chr1 (285-318)||(8893243-8893276)
chr1 (530-562)||(8737567-8737599)
[»] scaffold0722 (1 HSPs)
scaffold0722 (412-566)||(5387-5541)
[»] scaffold0012 (1 HSPs)
scaffold0012 (412-566)||(244735-244889)
[»] chr5 (53 HSPs)
chr5 (412-566)||(29310215-29310369)
chr5 (412-566)||(31645928-31646082)
chr5 (412-562)||(4726793-4726943)
chr5 (412-566)||(6887039-6887193)
chr5 (412-566)||(4070651-4070804)
chr5 (412-566)||(28618702-28618855)
chr5 (412-561)||(9034808-9034957)
chr5 (412-566)||(10923995-10924148)
chr5 (445-565)||(35906401-35906521)
chr5 (412-555)||(20270813-20270956)
chr5 (412-555)||(41554586-41554729)
chr5 (412-566)||(5378401-5378555)
chr5 (412-554)||(41063269-41063411)
chr5 (412-555)||(22397420-22397563)
chr5 (412-555)||(33486441-33486584)
chr5 (412-546)||(2415499-2415633)
chr5 (412-554)||(18472599-18472740)
chr5 (440-566)||(19645902-19646028)
chr5 (412-555)||(40774859-40775003)
chr5 (412-562)||(8812017-8812166)
chr5 (412-562)||(6647778-6647928)
chr5 (448-549)||(34893822-34893923)
chr5 (413-548)||(15710642-15710777)
chr5 (412-555)||(34844015-34844158)
chr5 (412-553)||(41988251-41988392)
chr5 (449-564)||(29154356-29154471)
chr5 (412-562)||(13007791-13007940)
chr5 (412-518)||(41358138-41358244)
chr5 (436-554)||(32387588-32387705)
chr5 (412-554)||(32390520-32390662)
chr5 (412-562)||(6074601-6074751)
chr5 (412-555)||(34873960-34874103)
chr5 (412-562)||(13079244-13079393)
chr5 (412-541)||(34866526-34866655)
chr5 (433-564)||(28388971-28389103)
chr5 (412-561)||(20146085-20146231)
chr5 (420-555)||(37425131-37425261)
chr5 (434-562)||(8957327-8957455)
chr5 (449-554)||(28500825-28500930)
chr5 (412-562)||(40565022-40565170)
chr5 (412-554)||(14910549-14910691)
chr5 (441-562)||(12524529-12524650)
chr5 (412-545)||(13080252-13080386)
chr5 (412-470)||(37425095-37425153)
chr5 (506-562)||(34950639-34950695)
chr5 (489-554)||(17325535-17325600)
chr5 (412-456)||(28423774-28423818)
chr5 (284-324)||(32391370-32391410)
chr5 (278-309)||(22397703-22397734)
chr5 (412-470)||(2979384-2979441)
chr5 (502-555)||(25770795-25770848)
chr5 (272-309)||(28423953-28423990)
chr5 (489-562)||(35455268-35455341)
[»] scaffold0665 (2 HSPs)
scaffold0665 (412-566)||(988-1142)
scaffold0665 (269-305)||(1250-1286)
[»] scaffold0024 (1 HSPs)
scaffold0024 (412-566)||(36628-36777)
[»] scaffold0045 (1 HSPs)
scaffold0045 (412-566)||(9519-9672)
[»] scaffold0011 (1 HSPs)
scaffold0011 (426-566)||(11127-11267)
[»] scaffold0157 (1 HSPs)
scaffold0157 (412-549)||(1019-1156)
[»] scaffold0150 (1 HSPs)
scaffold0150 (412-554)||(10184-10326)
[»] scaffold0627 (1 HSPs)
scaffold0627 (412-546)||(6668-6800)
[»] scaffold0018 (2 HSPs)
scaffold0018 (412-483)||(137002-137073)
scaffold0018 (504-555)||(136946-136997)
[»] scaffold0340 (1 HSPs)
scaffold0340 (412-555)||(11648-11793)
[»] scaffold0112 (1 HSPs)
scaffold0112 (503-562)||(25377-25436)
[»] scaffold0023 (1 HSPs)
scaffold0023 (445-545)||(91285-91385)
[»] scaffold1294 (1 HSPs)
scaffold1294 (501-554)||(962-1016)
[»] scaffold0009 (1 HSPs)
scaffold0009 (412-462)||(105151-105201)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 4634382 - 4634536
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4634382 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 4634481  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4634482 tcagatcagcttcgatccagtgcagatccaatcaatgactttggtgtcatccacg 4634536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 23067863 - 23067709
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  23067863 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 23067764  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  23067763 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 23067709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 412 - 565
Target Start/End: Complemental strand, 14542527 - 14542374
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14542527 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 14542428  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccac 565  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  14542427 tcagatcagcttcgatccagtgcagatccaatcaatgactttgttgtcatccac 14542374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 46716909 - 46716755
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  46716909 gtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 46716810  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  46716809 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 46716755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 9661952 - 9662106
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  9661952 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 9662051  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  9662052 ttagatcagcttcgatccagtgcagatgcaatcaatgactttggcgtcatccacg 9662106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 32189079 - 32189232
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  32189079 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgattggttcagattg 32189178  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  32189179 tcagatcagcttcga-ccagtgcagatccaatcaatgactttggcgtcatccacg 32189232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 412 - 565
Target Start/End: Complemental strand, 9474554 - 9474401
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9474554 gtgatttcgtcgtattcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgattggttcagattg 9474455  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccac 565  Q
    || ||||| ||||||||||||| ||||||||||||||| ||||  |||||||||    
T  9474454 tctgatcaacttcgatccagtgtagatccaatcaatgactttgacgtcatccac 9474401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 416 - 566
Target Start/End: Original strand, 42972141 - 42972291
Alignment:
Q  416 tttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcag 515  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||    
T  42972141 tttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttatgcgacgttatttttctttcttgtttctctcaggtatttgatcggttcagattgtcag 42972240  T
Q  516 atcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||| ||||||||||||||||||||||||||||| ||||  ||||||||||    
T  42972241 atcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccacg 42972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 417 - 566
Target Start/End: Complemental strand, 30470132 - 30469984
Alignment:
Q  417 ttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcaga 516  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  30470132 ttcgtcgtcttcgtgcgacgttggtt-gtttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcaga 30470034  T
Q  517 tcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  30470033 tcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacg 30469984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 37869432 - 37869278
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||||||||| || |||||||||||||| || |||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||||    
T  37869432 gtgattttgtcgtcttcttgcgacgttggtttgtttgttgtctttgtgcgacgttatttatttttcttgtttctctaaggtatttgatcagttcagattg 37869333  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  37869332 tcagatcagcttcgatccagtgcaaatccaatcaatgactttggcgtcatccacg 37869278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 34115666 - 34115521
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||     ||||| ||||||||||||||||||||||||||||||||||    
T  34115666 gtgatttcgtcgtcttcgtgcgacgttggtatgttcgttgtctttgtgcgacgtt-----ttttttttgtttctcttaggtatttgatcggttcagattg 34115572  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  34115571 tcagatcagcttcaatccagtgtagatccaatcaatgattttggcgtcatc 34115521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 41486674 - 41486828
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41486674 gtgattttgtcgtctttgtgcgatgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcagctatttgatcggttcagattg 41486773  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| || ||||||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  41486774 tcaaattagcttcgatacagtgcaaatccaatcaatgactttggcgtcatccacg 41486828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 31601373 - 31601217
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttagg--tatttgatcggttcagat 509  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| | |||||||||||||| |||  |||||||| |||||||||    
T  31601373 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttatctttcttgtttctctcaggtatatttgattggttcagat 31601274  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||||    
T  31601273 tgtcagatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccacg 31601217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 15729996 - 15729853
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||  |||||||||||  | ||||||||| || ||||||||||    
T  15729996 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagattg 15729897  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  15729896 tcagatcaacttcgatccagtgcagatcaaatcaatgattttgg 15729853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 46728935 - 46728793
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||| ||||||||||||  |||||||||||  | ||||||||| |||||||||||||    
T  46728935 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattg 46728836  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  46728835 tcagatcagcttcgatccagtgcagatcaaatcaatgactttg 46728793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 566
Target Start/End: Original strand, 53903713 - 53903834
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  53903713 ttcgtcgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgccagatcagcttcgatccagtgcagatccaatc 53903812  T
Q  545 aatgattttggtgtcatccacg 566  Q
    ||||| ||||| ||||||||||    
T  53903813 aatgactttggcgtcatccacg 53903834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 50003191 - 50003048
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||| |||||||||||||| ||||||| |||  || |||||||    
T  50003191 gtgatttcgtcgtcttcgtgcgacgttggtttgttcaccgtctttgtgcgacgatgtttgtctttcttgtttctctcaggtattagattagtccagattg 50003092  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||| || ||||||| || |||||    
T  50003091 tcagatcagcttcgatccagtgcaaattcaatcaacgactttgg 50003048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 564
Target Start/End: Complemental strand, 52555714 - 52555603
Alignment:
Q  453 ctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattt 552  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  52555714 ctttgtacgacgttgtttgtctttcttgtttctcttaggtatttaatcggttcagattgtcaaatcagcttcgatccagtgcagatccaatcaatgactt 52555615  T
Q  553 tggtgtcatcca 564  Q
    ||| ||||||||    
T  52555614 tggcgtcatcca 52555603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 20961548 - 20961701
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| |||||||||| ||||||| ||||||| |||||||| || ||  |||||||||||| ||||||||||||| |||||||||    
T  20961548 gtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcatctttgtacgacgttggtttttcgtcttgtttctctcaggtatttgatcgcttcagattg 20961646  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||| |||||||||||||||||| |||||||||| ||||  ||||||||||    
T  20961647 tcagatcaacttcgatccagtgcagattcaatcaatgactttgacgtcatccacg 20961701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 566
Target Start/End: Complemental strand, 54420723 - 54420601
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagc-ttcgatccagtgcagatccaat 543  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||| ||||||||| ||||    
T  54420723 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctgaggtatttgatcgcttcagattgtcagatcaactttcgatctagtgcagattcaat 54420624  T
Q  544 caatgattttggtgtcatccacg 566  Q
    |||||| ||||  ||||||||||    
T  54420623 caatgactttgacgtcatccacg 54420601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 417 - 562
Target Start/End: Complemental strand, 30416603 - 30416458
Alignment:
Q  417 ttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcaga 516  Q
    ||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||| | ||| ||||||   || |||||||| ||||||||||||||||||    
T  30416603 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagattgtcaga 30416504  T
Q  517 tcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||| ||||||||||||||| ||||||||| ||||| ||||||    
T  30416503 tcagctttgatccagtgcagatcaaatcaatgactttggagtcatc 30416458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 43156875 - 43157019
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| |||  |||||| ||||||||||| |||||||||||||||||||| |||||||||||  | ||||||||| |||||||||||||    
T  43156875 gtgatttcgtcgtcttagtgcaacgttgttttgttcgtcgactttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagattg 43156974  T
Q  512 tcagatcagcttcgatccagtgc-agatccaatcaatgattttgg 555  Q
    | |||||||||||||| |||||| ||||| ||||||||| |||||    
T  43156975 ttagatcagcttcgattcagtgcaagatcaaatcaatgactttgg 43157019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 413 - 555
Target Start/End: Complemental strand, 29474343 - 29474200
Alignment:
Q  413 tgatttcgtcgtcttcgtgtg-acgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||| || ||||| ||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||  | ||||||||| |||||||||||||    
T  29474343 tgatttagttgtcttagtgtgtaccttgttttgttcgtcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagattg 29474244  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||| || ||||||||||||||||||| ||||||||| |||||    
T  29474243 tcagaccatcttcgatccagtgcagatcaaatcaatgactttgg 29474200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 433 - 555
Target Start/End: Original strand, 14346551 - 14346673
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagt 532  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||||||  | ||||||||| ||| ||||||||||||||||||||||||||||||    
T  14346551 gacgttgttttgttcgtcgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgatccagt 14346650  T
Q  533 gcagatccaatcaatgattttgg 555  Q
    ||| ||| ||||||||| |||||    
T  14346651 gcaaatcaaatcaatgactttgg 14346673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 412 - 549
Target Start/End: Original strand, 12519755 - 12519892
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||| |||| |||||||| ||  | ||||||||| | |||||| ||||    
T  12519755 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattg 12519854  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  12519855 tcagatcaacttcgatctagtgcagatccaatcaatga 12519892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 51646192 - 51646336
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggttt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||||||||||||||  || ||| || |||| ||||||||||||||||||| ||||||||| ||||||||||| || | ||||||| ||||||||||||    
T  51646192 gtgatttcgtcgtcttaatgcgacatttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgttcggttcagatt 51646291  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
     |||||||||||||||||||||||||||| |||| |||| |||||    
T  51646292 atcagatcagcttcgatccagtgcagatcaaatcgatgactttgg 51646336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 38434698 - 38434841
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||| |||||||||||  | ||||||||| ||  ||||||||     
T  38434698 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagatta 38434797  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
      |||||||||||||||||||||||||  ||||||||| |||||    
T  38434798 ctagatcagcttcgatccagtgcagataaaatcaatgactttgg 38434841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 1125040 - 1125182
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||| | ||| || |||| |||||  ||||||||| |||||||||| |||| |||||||||||  | ||||||||| | |||||| ||||    
T  1125040 gtgatttcgtcgtcatagtgcgatgttgttttgtctgtcgtctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgtttggttcaaattg 1125139  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  1125140 tcagatcagcttcgatccagtgcagatcaaatcaatgattttg 1125182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 417 - 535
Target Start/End: Original strand, 40859778 - 40859896
Alignment:
Q  417 ttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcaga 516  Q
    ||||| ||||| ||| |||| || |||||||||||||||||||||||||||||||| ||||||||||   |  |||||||| ||||||||||||||||||    
T  40859778 ttcgttgtctttgtgcgacgctgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcaga 40859877  T
Q  517 tcagcttcgatccagtgca 535  Q
    |||||||||||||||||||    
T  40859878 tcagcttcgatccagtgca 40859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 46775871 - 46775730
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||||||||||| ||  |||||||| |||||||| |||||||||| ||| ||| |||  | | ||||||| ||| |||||||||    
T  46775871 gtgatttcgtcgtcttagtgtgacgttgtttaattcgtcgt-tttgtgcggcgttgtttgtcttttttgcttcgttcatgtatttgttcgattcagattg 46775773  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  46775772 tcagatcagcttcgatctagtgcagatccaatcaatgaatttg 46775730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 3169549 - 3169678
Alignment:
Q  436 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 535  Q
    ||||| |||||||| ||||||||||| |||||||||| |||||||||||  | || |||||| |||||||| ||||||||||||||||| ||||||||||    
T  3169549 gttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgttcggttcaaattgtcagatcagcttcaatccagtgca 3169648  T
Q  536 gatccaatcaatgattttggtgtcatccac 565  Q
    ||| |||||||||| ||| | |||||||||    
T  3169649 gattcaatcaatgactttcgcgtcatccac 3169678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 28990399 - 28990539
Alignment:
Q  414 gatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtc 513  Q
    ||||| |||||| | ||| ||||||||||||||||| |||||||||||  ||||| ||| |||||||||||  | ||| ||||| || ||||||||||||    
T  28990399 gattttgtcgtcatagtgcgacgttggtttgttcgttgtctttgtgcggtgttgtctgtctttcttgtttcgttcaggcatttgttccgttcagattgtc 28990498  T
Q  514 agatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||| |||||||||| |||||| ||||||||||||||||||    
T  28990499 agattagcttcgatctagtgcatatccaatcaatgattttg 28990539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 530
Target Start/End: Complemental strand, 44375279 - 44375161
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||| ||| || ||||||| || ||||| || |||||||||||    
T  44375279 gtgatttcgtcgtcttcgtgcgacgttcgtttgttcgtcgtctgtgtgcgacgttatttgtcttttttatttctctcagatatttaattggttcagattg 44375180  T
Q  512 tcagatcagcttcgatcca 530  Q
    | |||||||| ||||||||    
T  44375179 ttagatcagcctcgatcca 44375161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 429 - 554
Target Start/End: Original strand, 16991988 - 16992113
Alignment:
Q  429 gtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatc 528  Q
    ||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||   | |||||||   |||||||||||| |||||||||||||||||    
T  16991988 gtgtgacgttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagattatcagatcagcttcgatc 16992087  T
Q  529 cagtgcagatccaatcaatgattttg 554  Q
    ||||||| ||| ||||||||| ||||    
T  16992088 cagtgcatatcaaatcaatgactttg 16992113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 412 - 564
Target Start/End: Complemental strand, 6789891 - 6789739
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| |||   |||| |||||||||||||||||||||| | |||||||| |||||||||||  | ||||||||| ||  |||||| ||    
T  6789891 gtgattttgtcgtcttagtgcagcgtttgtttgttcgtcgtctttgtgcgccattgtttgtctttcttgtttcgttaaggtatttgttcaattcagaatg 6789792  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatcca 564  Q
    ||||||||||||||||||   ||||||||||||||||| |||||  |||||||    
T  6789791 tcagatcagcttcgatcctacgcagatccaatcaatgactttggcatcatcca 6789739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 6408542 - 6408686
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| ||||||| || |||||||||||||||||||| |||||||| || ||||||||  ||||||| ||| || ||||| ||||    
T  6408542 gtgatttcgacgtcttggtgcgacgttgtttggttcgtcgtctttgtgcgacattgtttgtcttacttgtttcgtttaggtaattgttcagttcaaattg 6408641  T
Q  512 tcagatcagcttcgatcca-gtgcagatccaatcaatgattttgg 555  Q
    ||| ||||||||||||| | ||| ||||| ||||||||| |||||    
T  6408642 tcaaatcagcttcgatctaggtgtagatcaaatcaatgagtttgg 6408686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 415 - 555
Target Start/End: Complemental strand, 29589373 - 29589233
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    ||||||||||||| ||| ||||||| |||||| || ||||||||||||| ||||||||  ||||||||||  | ||||||||| ||  ||||||||||      
T  29589373 atttcgtcgtcttagtgcgacgttgttttgtttgttgtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagattgttt 29589274  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||| ||||||||||||||||||| | ||||||| |||||    
T  29589273 gatcaacttcgatccagtgcagatcaactcaatgactttgg 29589233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 415 - 555
Target Start/End: Complemental strand, 46386786 - 46386646
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    ||||| ||||||| |||  || ||| |||||||| ||| |||||||| | ||||||||||||||||||||  ||||||||||| || ||||| |||||||    
T  46386786 atttcatcgtcttagtgcaactttgttttgttcgccgtgtttgtgcgtcattgtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtca 46386687  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
     |||| |||||||| ||||| |||||||||||||| |||||    
T  46386686 tatcaacttcgatctagtgctgatccaatcaatgactttgg 46386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 420 - 566
Target Start/End: Complemental strand, 7242776 - 7242630
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||||||| ||| ||||| | |||||||||||||||||||||| ||||||||| |||||| ||||  | | ||||||| |||||||||||||||||| ||    
T  7242776 gtcgtcttagtgcgacgtcgatttgttcgtcgtctttgtgcgaagttgtttgtctttcttatttcgttcaagtatttgttcggttcagattgtcagacca 7242677  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
     ||| |||| ||  |||||||||| ||||| ||||| ||| ||||||    
T  7242676 actttgatctaggccagatccaataaatgactttggcgtcgtccacg 7242630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 434 - 555
Target Start/End: Complemental strand, 26576495 - 26576375
Alignment:
Q  434 acgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtg 533  Q
    |||||| |||||| |||||| ||||||||| |||||||| |||| ||||||  | ||||||||| ||| |||||||||||| ||||||||||||| ||||    
T  26576495 acgttgttttgtttgtcgtcgttgtgcgac-ttgtttgtctttcctgtttcgttcaggtatttgttcgattcagattgtcaaatcagcttcgatctagtg 26576397  T
Q  534 cagatccaatcaatgattttgg 555  Q
    |||||| ||||||||| |||||    
T  26576396 cagatcaaatcaatgactttgg 26576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 29577137 - 29576993
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||  ||||||| |||  |||| | |||||||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||||||||    
T  29577137 gtgattttatcgtcttagtgcaacgtagttttgttcgacgtctttgtgcggcgttgtttgtcttttttgtttcgttcaggtatttgttcggttcagattg 29577038  T
Q  512 tcagatcagcttcgatccagtgcagatccaatc-aatgattttgg 555  Q
    ||| ||| |||| ||||||| ||| |||||||| |||||||||||    
T  29577037 tcatatcggcttagatccagcgcatatccaatcaaatgattttgg 29576993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 2945236 - 2945379
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||| | ||| ||||||||||||||| |||||| | |||| | ||||| || ||| |||||||  | ||||||||| |||||||||||||    
T  2945236 gtgatttcatcgtcatagtgcgacgttggtttgttcatcgtctgtatgcggcattgttagtgttttttgtttcgttcaggtatttgttcggttcagattg 2945335  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||  |||||||||||| |||  |||||||||| |||||    
T  2945336 tcagatcaatttcgatccagtgaagacacaatcaatgactttgg 2945379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 4959588 - 4959446
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||  ||| ||| ||||||||| || ||||||||||||||||||| |||||||||||  |   ||||||| |||||||  | ||    
T  4959588 gtgatttcgtcgtcttagtacgacattgttttgttcgttgtttttgtgcgacgttgtttgtctttcttgtttcgttcctgtatttgttcggttcgaaatg 4959489  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||| |||  |||||||||||||||||||| |||||    
T  4959488 tcagatcagcttagat-tagtgcagatccaatcaatgactttgg 4959446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 412 - 574
Target Start/End: Complemental strand, 4622724 - 4622562
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||| ||  |||| |||||||||||| | || ||||||| ||||||||||  || ||||||| | |||||||||||||    
T  4622724 gtgatttcgtcgtcttagtgcgacgtgggagtgtttgtcgtctttgtgtggcgctgtttgtctttcttgttttgctcaggtattggttcggttcagattg 4622625  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacgctgctgat 574  Q
    ||| ||  | ||||||||| |||| || ||||||| || |||| |||| |||||| |||||||    
T  4622624 tcatattggtttcgatccaatgcaaattcaatcaacgactttgatgtcctccacgttgctgat 4622562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 1657581 - 1657438
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| |||||||||| ||||| | |||| |  ||| | || |||||||   ||||||||||| ||| ||||||| |    
T  1657581 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcatctttatacgacatcatttatcttccttgttttgtttaggtatttgttcgattcagatag 1657482  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| ||||||||||||||||| ||| ||||||||| |||||    
T  1657481 tcagattagcttcgatccagtgcaaatcaaatcaatgactttgg 1657438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 1645546 - 1645433
Alignment:
Q  436 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 535  Q
    ||||| |||||||| ||||||||||| |||||||||| |||||||||||  | || |||||| | |||||| ||||||||||||| ||| ||| || |||    
T  1645546 gttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgtttggttcaaattgtcagatcagtttcaatctagggca 1645447  T
Q  536 gatccaatcaatga 549  Q
    ||| ||||||||||    
T  1645446 gattcaatcaatga 1645433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 9549571 - 9549673
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttg-tttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaat 543  Q
    ||||||||| | |||| |||||| ||||| |||||||||||||| |||||||||||||| || |||||||| ||||| ||||||| ||| ||||||||||    
T  9549571 ttcgtcgtcgtcgtgctacgttggtttgtctttcttgtttctctaaggtatttgatcggctc-gattgtcatatcagtttcgatctagtacagatccaat 9549669  T
Q  544 caat 547  Q
    ||||    
T  9549670 caat 9549673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 38170174 - 38170025
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| |||  |  ||| |||||| ||||||||  | ||||||||||||| |||||||||| | | ||||||||  || ||||||||||    
T  38170174 gtgatttcatcgtcttagtgcaatattgttttgtttgtcgtcttcttacgacgttgtttgtctttcttgtttgt-tcaggtatttattccgttcagattg 38170076  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| |||| ||| |||| ||||| |||||||||||||| ||||| ||||||    
T  38170075 tcatatcaactttgatctagtgctgatccaatcaatgactttggcgtcatc 38170025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 33020940 - 33020792
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt---cttgtttctcttaggtatttgatcggttcaga 508  Q
    |||||||| || |||| ||| |||| || |||||| |||||||||||||| |||||||||| |||   ||||||      |||| | || ||| ||||||    
T  33020940 gtgatttcatcatcttagtgcgacgctgttttgtttgtcgtctttgtgcggcgttgtttgtcttttcccttgttg-----aggtgtctgttcgattcaga 33020846  T
Q  509 ttgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||| |||||||||||||| |||||| |||||| ||||| ||||||    
T  33020845 ttgtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatc 33020792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 44021586 - 44021514
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 484  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||  ||| | |||||||| |||||||||||    
T  44021586 gtgattttgtcgtcttaatgtgacgttggtttgttcgtcgtctttaagcggcattgtttgtctttcttgtttc 44021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 30416636 - 30416578
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    |||||||||  ||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  30416636 gtgatttcgctgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgttt 30416578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 32188922 - 32188976
Alignment:
Q  270 tttctcttttccccttctcttttgtgagccgtcaccaaaattttagtttattctc 324  Q
    ||||||||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  32188922 tttctcttttccctttctcttttgtgagccgtcaccaaaaccctagtttattctc 32188976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 9474705 - 9474664
Alignment:
Q  268 tttttctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  9474705 tttttctcttttccccttctctcttgtgagccgtcaccaaaa 9474664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 28588476 - 28588536
Alignment:
Q  266 tatttttctctt-ttccccttctcttttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    ||||||||| || |||||||||||||||||||||||||||||||||  |||||| ||||||    
T  28588476 tatttttctattcttccccttctcttttgtgagccgtcaccaaaatcctagtttcttctcc 28588536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 5388614 - 5388756
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||| ||||||||||| ||||||| ||| |||| | ||||||||||||||  ||||||||| |||||    || | |||||| |||| | |  |||||||    
T  5388614 gtgagttcgtcgtcttagtgtgacattgttttggttgtcgtctttgtgcggtgttgtttgtcttttccctcttgt-ttaggtgtttgtttgaatcagatt 5388712  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||| |||||||||||||| ||| || |||||| ||||    
T  5388713 gtcagatcagattcgatccagtgcaaatcgaaccaatgactttg 5388756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 531
Target Start/End: Complemental strand, 9781821 - 9781704
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| ||||||||||  ||| || | ||| |||||| | |||||||||| ||| ||||||   | ||||||||| |||||||||||||    
T  9781821 gtgatttcttcgtcttagtgtgacgttt-tttatttgccgtttttgtgggtcgttgtttgtcttt-ttgttttgttcaggtatttgttcggttcagattg 9781724  T
Q  512 tcagatcagcttcgatccag 531  Q
    ||| || |||||||||||||    
T  9781723 tcatattagcttcgatccag 9781704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 559
Target Start/End: Original strand, 29257345 - 29257471
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttag-gtatttgatcggttcagattgtcagatcagcttcgatccag 531  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||  ||| | | | |  || |||| || |||||||||||||||||| ||| ||| |||    
T  29257345 gacgttgttttgttagtcgtctttgtgcaacgttgtttgtattttctgtct-tgtaacagtgtttgttcagttcagattgtcagatcaactttgatacag 29257443  T
Q  532 tgcagatccaatcaatgattttggtgtc 559  Q
    | || ||||||||||||| |||||||||    
T  29257444 tacaaatccaatcaatgactttggtgtc 29257471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 35658542 - 35658404
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    |||| ||||||||  || ||||||| ||||||   ||||||||||||||||||||||| |||  | ||| | || ||| |||| || ||| |||||||||    
T  35658542 attttgtcgtcttattgcgacgttgttttgtttaccgtctttgtgcgacgttgtttgtcttttctcttt-tgttcggtgtttgttcagtttagattgtca 35658444  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||| || |||| ||||||||| ||| |||||| ||||    
T  35658443 gatcagttttgatcaagtgcagattcaaccaatgactttg 35658404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 40859745 - 40859803
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    ||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||| |||||    
T  40859745 gtgatttcgccgtcttagtgcgacgttgttttgttcgttgtctttgtgcgacgctgttt 40859803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 503 - 548
Target Start/End: Complemental strand, 10665793 - 10665748
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||    
T  10665793 ttcagattgtcagatcaacttcgatcaagtgcatatccaatcaatg 10665748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 503 - 548
Target Start/End: Complemental strand, 10879938 - 10879893
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||    
T  10879938 ttcagattgtcagatcaacttcgatcaagtgcatatccaatcaatg 10879893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 37869611 - 37869571
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  37869611 ttttctcttttccctttctctcttgtgagccgtcaccaaaa 37869571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 554
Target Start/End: Complemental strand, 44021509 - 44021454
Alignment:
Q  499 tcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||||||||| || ||| ||| ||||||||||||||| ||||| ||||    
T  44021509 tcggttcagattgtcagaacaactttgattcagtgcagatccaattaatgactttg 44021454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 566
Target Start/End: Original strand, 31311647 - 31311721
Alignment:
Q  492 tatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||| |||||||||||||||  |||| ||| |||||||| |||||| ||| ||||| ||||  ||||||||||    
T  31311647 tatttgttcggttcagattgtcctatcaactttgatccagtacagatcaaattaatgactttgtcgtcatccacg 31311721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 548
Target Start/End: Original strand, 17219943 - 17219988
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    |||||||||| |||||| |||||||| |||| ||||||||||||||    
T  17219943 ttcagattgttagatcaacttcgatcaagtgtagatccaatcaatg 17219988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 548
Target Start/End: Complemental strand, 22067012 - 22066967
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    |||||||||||| ||||  ||||||| |||||||||||||||||||    
T  22067012 ttcagattgtcaaatcaatttcgatcaagtgcagatccaatcaatg 22066967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Complemental strand, 36804495 - 36804442
Alignment:
Q  502 gttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||| ||||| |||||| ||||||||| ||||| || ||||||||||||||||    
T  36804495 gttcaaattgttagatcaacttcgatccggtgcaaatacaatcaatgattttgg 36804442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 5e-70; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 40775366 - 40775520
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40775366 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 40775465  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  40775466 tcagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacg 40775520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 135160 - 135006
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  135160 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtttttgtgcgacgttgtttgattttcttgtttctcttaggtatttgatcggttcagattg 135061  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  135060 tcaaatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 135006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 7985991 - 7986145
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  7985991 gtgatttcgtcatcttcgtgtgacgttggtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttgatccgttcagattg 7986090  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  7986091 tcaaatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacg 7986145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 26017673 - 26017519
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  26017673 gtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 26017574  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  26017573 tcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcattcacg 26017519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 412 - 549
Target Start/End: Original strand, 47749833 - 47749970
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47749833 gtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 47749932  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  47749933 tcagatcagtttcgatccagtgcagatccaatcgatga 47749970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 24475441 - 24475594
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24475441 gtgatttcgtcgtccacgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 24475539  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  24475540 tcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacg 24475594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 8611638 - 8611485
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  8611638 gtgatttcgtcgtcttcgtgcgacgttggtt-gttagtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattg 8611540  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  8611539 tcatatcagcttcgatccagtgcagatccaatcaataactttggcgtcatccacg 8611485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 11001943 - 11002096
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11001943 gtgatttcgtcgtcttcgtgagacgttggtt-gttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 11002041  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| ||||    
T  11002042 tcagatcagcttcgattcagtgcagatctaatcaatgactttggcgtcattcacg 11002096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 24470493 - 24470646
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| |||||  |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24470493 gtgatttcatcgtcaacgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 24470591  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  24470592 tcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacg 24470646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 42490802 - 42490956
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||    
T  42490802 gtgatttcatcgtcttcgtgtgacgttggtttgttcgttgcctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagactg 42490901  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||| |||||||||||| ||||||| | ||| ||||||||||    
T  42490902 tcagatcagcttcgatctagtgcagatccagtcaatgactgtggcgtcatccacg 42490956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 43807165 - 43807011
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  43807165 gtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatctttgtgcgacgttgtttgtctttcttgtttctctcaggtgtttgatcggttcagattg 43807066  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | ||||||||||||||| |||||||||||||||||||| ||||| | ||||||||    
T  43807065 taagatcagcttcgatctagtgcagatccaatcaatgactttggcggcatccacg 43807011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 49167025 - 49167178
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  49167025 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcccaggtatttgatcgcttcagattg 49167123  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | |||||||||||||||||||||||||| ||||||||| ||| | ||||||||||    
T  49167124 ttagatcagcttcgatccagtgcagatctaatcaatgactttagcgtcatccacg 49167178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 30992838 - 30992696
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  30992838 gtgattttgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacgttgtttgtctttcttggttctctcaggtatttgatcggttcagattg 30992739  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||| |||||||| |||||||||||||||||||| ||||    
T  30992738 tcagatcaacttcgatctagtgcagatccaatcaatgactttg 30992696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 40476807 - 40476960
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  40476807 gtgatttcgtcgtcttcgtacaacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattg 40476905  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  40476906 tcagatcagcttcgatcaagtgcagatccaatcaatgactttgacgtcatccacg 40476960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 8319414 - 8319568
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||  |||||||||||||||||||||||||||| || |||||||| |||||||||||||| ||| |||||||||||||||||||    
T  8319414 gtgattttgtcgtcttcgtacgacgttggtttgttcgtcgtctttgtgcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagattg 8319513  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | |||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||    
T  8319514 ttagatcagctttgatccagtgcagacccaatcaatgactttggcgtcatccacg 8319568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 25855235 - 25855092
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||  ||||||| ||||||||||||||||||| |||    
T  25855235 gtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcaggttg 25855136  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||    
T  25855135 tcagattagcttcgatccagtgcaaatccaatcaatgactttgg 25855092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 23732408 - 23732254
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||| |||||||||||  | ||||||||| |||||||||||||    
T  23732408 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcatctttgtgcgtcgctgtttgtctttcttgtttcgttcaggtatttggtcggttcagattg 23732309  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| || ||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  23732308 tcaaattagcttcgatccagtgcagatccaatcaatgactttggcgtcgtccacg 23732254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 28015456 - 28015599
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||  || ||| ||| |||||||||||||||||||||||||||||||  |||||||||||  | ||||||||| |||||||||||||    
T  28015456 gtgatttcgtcgtcttaatgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattg 28015555  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    | |||||||||||||||||||||||||| ||||||||| |||||    
T  28015556 ttagatcagcttcgatccagtgcagatcaaatcaatgactttgg 28015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 772542 - 772685
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| |||||  |||||||||||||||  |||||||| |||||||||||  | ||||||||| |||||||||||||    
T  772542 gtgatttcgtcgtcttagtgcgacgttgttttgtctgtcgtctttgtgcgatattgtttgtctttcttgtttcgttcaggtatttgttcggttcagattg 772641  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  772642 tcagatcagcttcaatctagtgcagatccaatcaatgactttgg 772685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 5025071 - 5024928
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||   |||||| ||||  ||||||||||| |||||||||||||    
T  5025071 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagattg 5024972  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||| ||||||||||| |||||| ||||||||| |||||    
T  5024971 tcagatcagattcgatccagtccagatcaaatcaatgactttgg 5024928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 464 - 566
Target Start/End: Complemental strand, 19895647 - 19895545
Alignment:
Q  464 gttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatcc 563  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  19895647 gttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatcc 19895548  T
Q  564 acg 566  Q
    |||    
T  19895547 acg 19895545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 412 - 549
Target Start/End: Original strand, 14707682 - 14707819
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| ||||| |||||||||||| ||||| |||||||| |||||||||| |||||||||||  ||||||||||| ||| |||| ||||    
T  14707682 gtgatttcgtcatcttagtgtggcgttggtttgttagtcgtttttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattcaaattg 14707781  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    || ||||| |||||||||| |||||||||||| |||||    
T  14707782 tctgatcatcttcgatccaatgcagatccaattaatga 14707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 566
Target Start/End: Original strand, 37399730 - 37399851
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    |||||||||||||||||||||||||||| |||||||||||| | | ||||||||| | |||| |||||| ||| ||||||||||||||||||||||||||    
T  37399730 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttgattgattcaaattgtccgattagcttcgatccagtgcagatccaatc 37399829  T
Q  545 aatgattttggtgtcatccacg 566  Q
    ||||| ||||  ||||||||||    
T  37399830 aatgactttgacgtcatccacg 37399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 554
Target Start/End: Original strand, 44681563 - 44681701
Alignment:
Q  416 tttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcag 515  Q
    |||||||||||  |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||  |||| |||||  |  |||||||||||||     
T  44681563 tttcgtcgtctcagtgtgacgttggtttgttcgtcgtttttgtgggacgttgtttgtctttcttgtttcgtttagatatttattatgttcagattgtcaa 44681662  T
Q  516 atcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    | |||||||||||| ||| ||||||||||||||| ||||    
T  44681663 accagcttcgatccggtgtagatccaatcaatgactttg 44681701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 9933946 - 9934085
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||   ||| |||||||||||  | ||||||||| | | |||||||||    
T  9933946 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgtt---tgtctttcttgtttcgttcaggtatttgtt-gattcagattg 9934041  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||    
T  9934042 tcagatcagctttgatccagtgcagatcaaatcaatgactttgg 9934085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 562
Target Start/End: Original strand, 39090220 - 39090337
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    |||||| ||||||||||||||||||||| |||||||||||  | ||||||||| |||||||||||||||| |||||||||||||||||||| ||| | ||    
T  39090220 ttcgtcatctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatcagcttcgatccagtgcaaatcaattc 39090319  T
Q  545 aatgattttggtgtcatc 562  Q
    ||||| ||||| ||||||    
T  39090320 aatgactttggagtcatc 39090337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 535
Target Start/End: Complemental strand, 13008688 - 13008565
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||  | ||||||||| |||||||||||||    
T  13008688 gtgattttgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttgttcggttcagattg 13008589  T
Q  512 tcagatcagcttcgatccagtgca 535  Q
    ||| ||||| || ||||| |||||    
T  13008588 tcatatcaggtttgatcccgtgca 13008565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 429 - 562
Target Start/End: Complemental strand, 10250481 - 10250348
Alignment:
Q  429 gtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatc 528  Q
    ||||||||||| ||||||||||||||||||| | |||||||||| ||| || ||||  | ||| ||||| || ||||||||||||||| |||||||||||    
T  10250481 gtgtgacgttgttttgttcgtcgtctttgtgtggcgttgtttgtcttttttatttcgttcaggaatttgttccgttcagattgtcagaacagcttcgatc 10250382  T
Q  529 cagtgcagatccaatcaatgattttggtgtcatc 562  Q
     |||||||||| ||||||||| ||||| ||||||    
T  10250381 gagtgcagatcaaatcaatgactttggagtcatc 10250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 47156491 - 47156638
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgat---cggttcaga 508  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||         |||||||||| |||||||||||    | ||||||    
T  47156491 gtgatttcgtcgtcttcgtgtgacgttgg-ttgttcgtcgtctttgtgcaacgttgt---------ttgtttctctcaggtatttgatgaatgcttcaga 47156580  T
Q  509 ttgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||| |||| ||||||| ||||||||||| ||||||||| |||||| |||||||||    
T  47156581 ttgtcatatcaacttcgatacagtgcagatctaatcaatgactttggtatcatccacg 47156638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 21552470 - 21552320
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||||| ||| ||||||| || ||| ||||||||| || |||||||||||| |||||    || | ||| || |||||||||||||||||    
T  21552470 gtgatttcgtcgtcttagtgcgacgttgtttcgtttgtcgtctttatgtgacgttgtttgtcttttccctcttgt-ttaagtgtttgatcggttcagatt 21552372  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||| ||||||||||| ||||||||||| |||||| ||||| ||||||    
T  21552371 gtcagatccgcttcgatccactgcagatccaaccaatgactttggcgtcatc 21552320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 434 - 541
Target Start/End: Original strand, 22751559 - 22751666
Alignment:
Q  434 acgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtg 533  Q
    ||||||||||||||||||||||| |||| |||||||||  |||||||||||  | |  |||||| || ||||||||||||||||||||||||||||| ||    
T  22751559 acgttggtttgttcgtcgtctttatgcggcgttgtttgcctttcttgtttcgttcaactatttgttcagttcagattgtcagatcagcttcgatccaatg 22751658  T
Q  534 cagatcca 541  Q
    ||||||||    
T  22751659 cagatcca 22751666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 412 - 558
Target Start/End: Original strand, 46918499 - 46918644
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| |||  || |||||||||| ||||||||||||||  |||||||||  ||||||||||  | ||| ||||| |||||||||||||    
T  46918499 gtgatttcgtcatctttgtgcaacattggtttgtttgtcgtctttgtgcggtgttgtttgtcattcttgtttcgttcagg-atttgttcggttcagattg 46918597  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgt 558  Q
    |||||||||||| |||||| |||| || |||||||||| ||| ||||    
T  46918598 tcagatcagcttagatccaatgcaaattcaatcaatgactttagtgt 46918644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 562
Target Start/End: Complemental strand, 41748509 - 41748392
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    |||| |||||| |||||||||||||||| ||||||||||   || |||||||| ||||||||||| ||||||||| |||||||| | |||||||| ||||    
T  41748509 ttcgccgtcttagtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagatcgtcagatcaacttcgatcaaatgcagatcaaatc 41748410  T
Q  545 aatgattttggtgtcatc 562  Q
    ||||| ||||| ||||||    
T  41748409 aatgactttggagtcatc 41748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 43483699 - 43483837
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||||            |||| |||||||||||||    
T  43483699 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgt------------tttgttcggttcagattg 43483786  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| |||||| ||||||||||||| ||| ||||||||| ||| | ||||||    
T  43483787 tcaaatcagcatcgatccagtgcatatcaaatcaatgacttttgagtcatc 43483837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 440 - 547
Target Start/End: Complemental strand, 24045267 - 24045160
Alignment:
Q  440 gtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatc 539  Q
    |||||||||||||||||||| | | |||||||| ||||||||||  || | ||||||||||| ||||||||||||||||| ||| |||| |||||||||     
T  24045267 gtttgttcgtcgtctttgtgtggcattgtttgtatttcttgttttgctcatgtatttgatcgattcagattgtcagatcaacttagatctagtgcagatt 24045168  T
Q  540 caatcaat 547  Q
    ||||||||    
T  24045167 caatcaat 24045160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 29804690 - 29804551
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttg-tttgtttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||| | ||| |||| || |||||| |||||||||||||||||||| ||| ||||||||||     | |||| |||| ||| ||||||||    
T  29804690 gtgatttcgtcgtcatagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgttttttttttcttgt-----tcaggtgtttgttcgattcagatt 29804596  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
     ||||||||||||||||||  ||||||||||| |||||| |||||    
T  29804595 atcagatcagcttcgatccgatgcagatccaaccaatgactttgg 29804551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 38649372 - 38649231
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||| |||||||||| ||| ||| ||| |||||| ||||||||||||||||||||||||  |||||| ||||  | | ||||||| || | ||||||||    
T  38649372 gtgatctcgtcgtcttagtgagaccttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttttttcgttcaagtatttgttc-gatcagattg 38649274  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    | ||||||||||||||||| |||| ||| ||||||||| |||||    
T  38649273 ttagatcagcttcgatcca-tgcatatcaaatcaatgactttgg 38649231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 565
Target Start/End: Complemental strand, 35135181 - 35135046
Alignment:
Q  429 gtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatc 528  Q
    ||||||||||||||||||| ||||||||||| | |||||| ||| |||| | ||||  | ||| | ||  || ||||| ||| ||||||| |||||||||    
T  35135181 gtgtgacgttggtttgttc-tcgtctttgtgtggcgttgtctgtctttcctatttcattcaggaaattattcagttcaaattatcagatcggcttcgatc 35135083  T
Q  529 cagtgcagatccaatcaatgattttggtgtcatccac 565  Q
     |||||||||||||||||||| ||| |||||||||||    
T  35135082 aagtgcagatccaatcaatgactttcgtgtcatccac 35135046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 491 - 562
Target Start/End: Complemental strand, 33530411 - 33530340
Alignment:
Q  491 gtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||| ||||||    
T  33530411 gtatttgttcggttcagattgtcaaatcagcttagatccagtgcaaatccaatcaatgaatttggcgtcatc 33530340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 463 - 549
Target Start/End: Complemental strand, 37890453 - 37890367
Alignment:
Q  463 cgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    ||||||||||||||||||||||  | | ||||||| ||| ||||||||||||||||||||| |||||  |||||||||| |||||||    
T  37890453 cgttgtttgtttttcttgtttcgttcacgtatttgttcgtttcagattgtcagatcagctttgatccgctgcagatccagtcaatga 37890367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 435 - 555
Target Start/End: Original strand, 34893233 - 34893351
Alignment:
Q  435 cgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgc 534  Q
    ||||| |||||||||||||||||| | |  |||||||| |||||||||||   |||||||||| |   ||||| ||||||||||||||| ||||||||||    
T  34893233 cgttgttttgttcgtcgtctttgtacaatcttgtttgtctttcttgtttcg--taggtatttgtttcattcagtttgtcagatcagctttgatccagtgc 34893330  T
Q  535 agatccaatcaatgattttgg 555  Q
    ||||| ||| ||||| |||||    
T  34893331 agatcaaattaatgactttgg 34893351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 14734064 - 14734004
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 472  Q
    |||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||    
T  14734064 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgt 14734004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 21329311 - 21329170
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| |||||||  || |||||| |||| |||||||||| ||||||||| ||| |  ||| | | |||| |||| ||  |||||||||    
T  21329311 gtgatttcgtcttcttagtgtgaccctgttttgtttgtcgactttgtgcgatgttgtttgtcttt-tcctttgt-tcaggtgtttgttcaattcagattg 21329214  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| |||||||| ||||||||||||| |||||| |||||    
T  21329213 tcagatcaacttcgatctagtgcagatccaaccaatgactttgg 21329170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 527
Target Start/End: Complemental strand, 23177598 - 23177483
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||  |||||| ||| ||| ||||||| ||||||||||||||||| |||||| ||| ||||||||||   | ||||||||| | |||||| ||||    
T  23177598 gtgatttctccgtcttagtgcgaccttggttttttcgtcgtctttgtgcggcgttgtctgtctttcttgttttgttcaggtatttgtttggttcaaattg 23177499  T
Q  512 tcagatcagcttcgat 527  Q
     || ||||||||||||    
T  23177498 ccaaatcagcttcgat 23177483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 34594537 - 34594387
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||| ||||||||||| ||| || |||| |||||| |||||||||||||||| |||||||| ||||||   || | | | || |||| || ||||| |||    
T  34594537 gtgacttcgtcgtcttagtgcgaagttgttttgtttgtcgtctttgtgcgacattgtttgtcttttctctcttgt-tcaagtgtttgttcagttcaaatt 34594439  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
     ||| ||||||||| ||| ||||||||||||| |||||| ||||||||||||    
T  34594438 atcatatcagcttcaatctagtgcagatccaaccaatgactttggtgtcatc 34594387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 2532132 - 2532190
Alignment:
Q  504 tcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||    
T  2532132 tcagattgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatc 2532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 553
Target Start/End: Original strand, 32312666 - 32312807
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| |||  |||||| |||||||||||||||||||| | |||||| || |||||  | |   | | || |||| | | |||| ||||    
T  32312666 gtgatttcttcgtcttagtgcaacgttgttttgttcgtcgtctttgtgcaatgttgttagtctttctcatcttgttcatgtgtttgtttgattcatattg 32312765  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgatttt 553  Q
    ||| ||||||||||||| |||||| |||||||||||||||||    
T  32312766 tcatatcagcttcgatcaagtgcatatccaatcaatgatttt 32312807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 45949692 - 45949551
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagat-- 509  Q
    ||||||||||||| || ||| ||| ||| |||||| |||||||||||||| |||||| |  ||| | | || ||  ||||| |||| || ||||||||      
T  45949692 gtgatttcgtcgtgttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtct--tttccctcttgct--taggtgtttgttcagttcagatat 45949597  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||    
T  45949596 tgtcatatcagcttcgatcaagtgcagatccaatcaatgactttgg 45949551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 15123995 - 15123923
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 484  Q
    |||||||| ||||| | || | |||||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  15123995 gtgatttcatcgtcatagtataacgttggtttgttcttcgtatttgtgcaacgttgtttgtctttcttgtttc 15123923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 548
Target Start/End: Original strand, 36350300 - 36350403
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||| ||| |||||||||||| ||| ||||||   | || |||||| |||  | ||||||||| |||||||| ||| |||||| |||||||||    
T  36350300 ttcgtcgtcttagtgtgacgttgtttgtcttttttgtttggttcagatatttgttcgacttagattgtcatatcagctttgattcagtgcggatccaatc 36350399  T
Q  545 aatg 548  Q
    ||||    
T  36350400 aatg 36350403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 16263486 - 16263589
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||| || ||| ||| ||| ||||||||||||| |||||||||| ||||        |||||||  | ||||||||| |||||||||||||    
T  16263486 gtgatttcgtcgtgttagtgcgaccttgttttgttcgtcgtccttgtgcgacgatgtt--------ttgtttcgttcaggtatttgttcggttcagattg 16263577  T
Q  512 tcagatcagctt 523  Q
    ||| ||||||||    
T  16263578 tcaaatcagctt 16263589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 24350972 - 24350914
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||| |||||||||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcggcgttgtttg 24350914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 28476183 - 28476241
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||| |||||||||    
T  28476183 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcggcgttgtttg 28476241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 35141941 - 35141892
Alignment:
Q  276 ttttccccttctcttttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    ||||||| || ||| ||||||||||||||||||||  |||||||||||||    
T  35141941 ttttccctttttctcttgtgagccgtcaccaaaatcatagtttattctcc 35141892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 43098676 - 43098741
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttc 477  Q
    |||||||||||||||| ||| | ||||| ||||||| || ||||| |||||| |||||||| ||||    
T  43098676 gtgatttcgtcgtcttagtgcggcgttgttttgttcttcatctttatgcgacattgtttgtctttc 43098741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 35363080 - 35363024
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtt 469  Q
    |||||||||||||||  || |||||||| |||||||| |||||| ||| ||||||||    
T  35363080 tgatttcgtcgtcttattgcgacgttggattgttcgtagtctttatgcaacgttgtt 35363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 5e-70; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 23843439 - 23843285
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23843439 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctcttaggtatttgatcggttcagattg 23843340  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  23843339 tcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacg 23843285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 13234123 - 13233969
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  13234123 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcaaattg 13234024  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  13234023 tcagatcagtttcgatctagtgcagatccaatcaatgattttggcgtcatccacg 13233969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 12576495 - 12576342
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  12576495 gtgattccgtcgtctttgtgtgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcgcttcagattg 12576397  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  12576396 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 12576342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 19759887 - 19760041
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  19759887 gtgatttcgtcatcttcgagcgacgttggtttgttcatcgtctttgtgcgacgttgtttgtatttcttgtttctctcatgtatttgatcggttcagattg 19759986  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  19759987 tcagatcagtttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 19760041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 11426041 - 11426194
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  11426041 gtgatttcgtcatcttcgtgcgatgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatctcttcagattg 11426139  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  11426140 tcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacg 11426194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 20845107 - 20845261
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  20845107 gtgattttgtcatcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgctgtttgtttttcttgtttctctcagatatttgatcggttcagattg 20845206  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||| ||||||||||||||||||||||||||||| || || ||||||||||    
T  20845207 tcagatcaacttcgatccagtgcagatccaatcaatgacttcggcgtcatccacg 20845261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 412 - 570
Target Start/End: Complemental strand, 548881 - 548723
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| |||||||||||  | ||||||||||||||||||||  || |||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  548881 gtgatttcatcgtcttcgtgcaatgttggtttgttcgtcgtcttcatgtgacgttgtttctttttcttgtttctatcaggtatttgatcggttcagattg 548782  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacgctgc 570  Q
    ||| ||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||    
T  548781 tcatatcagcttcgatctagtgcagatccaatcaattactttggcgtcatccacgctgc 548723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 7049344 - 7049486
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||| |||||||| |||||||||||  || ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7049344 gtgattttgtcatcttcgtgcgacgttggtttcgtcatcgtctttgtgagacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 7049443  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||| |||||||||||||||||| |||||||||| ||||    
T  7049444 tcagatcaacttcgatccagtgcagatgcaatcaatgactttg 7049486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 32457745 - 32457898
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||||||||    
T  32457745 gtgatttcgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacattgtttatttt-cttgtttctctcaggtatttgatcggttcagattg 32457843  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||| || ||||||| |||||||||||||||| || |  |||| ||||||||||    
T  32457844 tcagaccaacttcgattcagtgcagatccaatcgattacgttggcgtcatccacg 32457898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 412 - 545
Target Start/End: Original strand, 31748056 - 31748189
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||    
T  31748056 gtgatttcgacgtcttcgtgcgacattggtttctttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttgatcagtacagattg 31748155  T
Q  512 tcagatcagcttcgatccagtgcagatccaatca 545  Q
    ||||||||||||||||| ||||||||| ||||||    
T  31748156 tcagatcagcttcgatcaagtgcagattcaatca 31748189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 565
Target Start/End: Complemental strand, 8633206 - 8633058
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||| |||||||||    
T  8633206 gtgatttcgtcgttttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt---tgtttttcttgtttctctcaggtatt-gatcgcttcagattg 8633112  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccac 565  Q
    |||||||||||||||||||  ||||||||||||||| | ||||| |||||||||    
T  8633111 tcagatcagcttcgatccaacgcagatccaatcaattactttggcgtcatccac 8633058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 16913427 - 16913578
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||    
T  16913427 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcatcgtccttgtgcgacgttgtttgtttttct-gtttctctcatgtatttgatctgttcagattg 16913524  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| ||| || |||||||||||||||||||||  |||| ||||||||||    
T  16913525 tcagatcagtttcaatacagtgcagatccaatcaatga-cttggcgtcatccacg 16913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 535
Target Start/End: Original strand, 10744682 - 10744805
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||  ||||||| |||  ||||||||||| |||||||||||||    
T  10744682 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcagattg 10744781  T
Q  512 tcagatcagcttcgatccagtgca 535  Q
    |||||||||||||||||| |||||    
T  10744782 tcagatcagcttcgatccggtgca 10744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 32804394 - 32804546
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| ||| || |||||||||||| ||||||||||  | |||||||||| |||||||||||  | | ||||||| | | |||||||||    
T  32804394 gtgatttcatcgtcttagtgagatgttggtttgttcctcgtctttgtatggcgttgtttgtctttcttgtttcgttcatgtatttgtttgattcagattg 32804493  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatcca 564  Q
    | |||||| |||||||| |||||||||||||||||||| ||||||||| ||||    
T  32804494 tgagatcaacttcgatcaagtgcagatccaatcaatgactttggtgtcgtcca 32804546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 4663835 - 4663685
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||  |||||||||| |||||||||||| |||||| ||||| |||||||  | ||||||||| | ||||| |||||    
T  4663835 gtgatttcgtcgtcttagtgcgacgttattttgttcgtcatctttgtgcgactttgtttttttttattgtttcgttcaggtatttgtttggttctgattg 4663736  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| ||||| | |||||||||||| ||| ||||||||| ||||| ||||||    
T  4663735 tcatatcagttacgatccagtgcatatcaaatcaatgactttggagtcatc 4663685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 434 - 566
Target Start/End: Original strand, 1944217 - 1944349
Alignment:
Q  434 acgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtg 533  Q
    ||||||||||||  |||||||||||||| |||||||||| |||||||| ||  | ||||| ||| | |||||| ||||||| ||||||||||||||| ||    
T  1944217 acgttggtttgtctgtcgtctttgtgcggcgttgtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatcagcttcgatccaatg 1944316  T
Q  534 cagatccaatcaatgattttggtgtcatccacg 566  Q
    | |||||||||||| ||||||| ||| ||||||    
T  1944317 cggatccaatcaataattttggcgtcgtccacg 1944349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 559
Target Start/End: Original strand, 20496332 - 20496439
Alignment:
Q  452 tctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgatt 551  Q
    ||||||| |||| |||||||| ||| ||||||   | ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcaaatccaatcaatgact 20496431  T
Q  552 ttggtgtc 559  Q
    ||||||||    
T  20496432 ttggtgtc 20496439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 5544809 - 5544952
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    ||||| ||||| | ||| || |||| ||||||||||||||||||| |||||||||||| |||||| ||||  | |||| |||| | |||||||| |||||    
T  5544809 atttcatcgtcctagtgcgatgttgatttgttcgtcgtctttgtgtgacgttgtttgtctttcttatttcgttcaggtgtttgtttggttcagaatgtca 5544908  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttggtgt 558  Q
     ||||| |||||||| ||||| |||||||||| || ||||||||    
T  5544909 tatcagattcgatcctgtgcatatccaatcaacgactttggtgt 5544952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 33541544 - 33541396
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| |||||||| || |||||| ||||||||||||||| ||||||||| |||    ||  ||  |||| |||| | | |||||||||    
T  33541544 gtgattttgtcgtcttagtgtgacgctgttttgtttgtcgtctttgtgcgatgttgtttgtcttttcccttgttc--aggtgtttgttagattcagattg 33541447  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    | |||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  33541446 ttagatcagcttcgttccagtgcagatccaaccaatgactttggtgtcatc 33541396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 555
Target Start/End: Original strand, 31804352 - 31804462
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||| ||||||| |||||||| ||||||||||| || | ||||||| ||  |||||||||||||||||| ||||||| |||||||||| |||     
T  31804352 ttcgtcgtcttagtgcgacattgtttgtctttcttgtttcgctcaagtatttgctcaattcagattgtcagatcagattcgatctagtgcagatcaaatg 31804451  T
Q  545 aatgattttgg 555  Q
    ||||| |||||    
T  31804452 aatgactttgg 31804462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 5417213 - 5417141
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 484  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  5417213 gtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttctctttcttgtttc 5417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 416 - 555
Target Start/End: Original strand, 34020708 - 34020845
Alignment:
Q  416 tttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcag 515  Q
    |||||||||||| ||| |||| || |||||| ||||||||||| |||||||||||||||||| | ||  ||  |||| |||| || | ||||||||||||    
T  34020708 tttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtacgacgttgtttgtttttcctcttgttc--aggtgtttgttcagatcagattgtcag 34020805  T
Q  516 atcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| |||||| |||| |||||||| |||||| |||||    
T  34020806 atcagcctcgatctagtgtagatccaaccaatgactttgg 34020845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 440 - 555
Target Start/End: Complemental strand, 15128116 - 15128001
Alignment:
Q  440 gtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatc 539  Q
    |||| |||||||||||||||||| ||||||||| |||||| ||||  | | ||||||| || |||||||||||||  ||| |||||||||| ||||||||    
T  15128116 gtttattcgtcgtctttgtgcgatgttgtttgtctttcttctttcattcaagtatttgttctgttcagattgtcaattcaacttcgatccactgcagatc 15128017  T
Q  540 caatcaatgattttgg 555  Q
     ||||||||| |||||    
T  15128016 aaatcaatgactttgg 15128001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 543
Target Start/End: Original strand, 22530379 - 22530509
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| ||||||  ||||||| || ||||||||||| ||||||||| |||||| ||| | ||| ||||||| ||| ||  ||| |    
T  22530379 gtgatttcgacgtcttagtgagacgttattttgttcatcatctttgtgcgatgttgtttgtctttcttttttgt-ttaagtatttgttcgattttgatgg 22530477  T
Q  512 tcagatcagcttcgatccagtgcagatccaat 543  Q
    |||||||| |||||||||||||||||||||||    
T  22530478 tcagatcaacttcgatccagtgcagatccaat 22530509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 544
Target Start/End: Original strand, 904395 - 904499
Alignment:
Q  440 gtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatc 539  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||   | |  ||| || |||||||||| ||||||||||||||||||||| |||| |||    
T  904395 gtttgttcgccgtctttgtgtgacgttgtttgtctttcttgttttgttcaactatatgttcggttcagactgtcagatcagcttcgatccaatgcatatc 904494  T
Q  540 caatc 544  Q
    |||||    
T  904495 caatc 904499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 443 - 555
Target Start/End: Original strand, 8644375 - 8644487
Alignment:
Q  443 tgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaa 542  Q
    |||| |||||||||||||| ||||| |||| ||||||||||   | ||||||||| | ||||||||||||| ||||| ||| |||||| ||||||| |||    
T  8644375 tgttggtcgtctttgtgcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatcaacttagatccattgcagattcaa 8644474  T
Q  543 tcaatgattttgg 555  Q
    ||||||| |||||    
T  8644475 tcaatgactttgg 8644487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 520
Target Start/End: Original strand, 33194704 - 33194812
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||| || |||||| |||||||||||||||||  ||| |||  ||||||||| |||||| ||||  |  |||||||| |||||||||||||    
T  33194704 gtgatttcgtcgtgttagtgtgatgttggtttgttcgtcgtacttgagcgttgttgtttgtctttcttatttccttcgggtatttgttcggttcagattg 33194803  T
Q  512 tcagatcag 520  Q
    |||||||||    
T  33194804 tcagatcag 33194812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 15128168 - 15128114
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgtt 466  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  15128168 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgtt 15128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 20844926 - 20844982
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    |||||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||    
T  20844926 ttttctcttttccctttctctcttgtgagccgtcaccaaaaccttagtttcttctcc 20844982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 436 - 537
Target Start/End: Complemental strand, 12652188 - 12652087
Alignment:
Q  436 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 535  Q
    |||| |||||||||||| ||| ||||| ||||||| | |||||||||||  | | ||||||| ||||||  ||||||||||||| ||| |||  ||||||    
T  12652188 gttgttttgttcgtcgtatttctgcgatgttgtttttctttcttgtttcgttcatgtatttgttcggttaggattgtcagatcaacttagatttagtgca 12652089  T
Q  536 ga 537  Q
    ||    
T  12652088 ga 12652087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 511 - 555
Target Start/End: Original strand, 892482 - 892526
Alignment:
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||    
T  892482 gtcagatctgcttcgacccagtgcagatccaatcaatgactttgg 892526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 545985 - 546043
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||| ||||||| ||| |||||||  |||||||||||| |||||||||||||||||    
T  545985 gtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtc-ttgtgcgacgttgtttg 546043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 1523363 - 1523421
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||||| |||||||    
T  1523363 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcgacattgtttg 1523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 566
Target Start/End: Complemental strand, 5417132 - 5417085
Alignment:
Q  519 agcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||||||    
T  5417132 agcttcgatgcagtgcagatccaatcaaagactttggtgtcgtccacg 5417085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 32574536 - 32574599
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt 476  Q
    |||||||||||||||  || || |||||||||||| |||| |||||||| |||| |||||||||    
T  32574536 tgatttcgtcgtcttaatgcgatgttggtttgttcatcgtatttgtgcggcgttttttgttttt 32574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 518
Target Start/End: Original strand, 891687 - 891793
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| | ||||  ||||| | |||||||||| ||| |||||||||   || |||||| |||||| ||||  | ||||||||| |||||| ||||||    
T  891687 gtgatttcatggtctgagtgtggctttggtttgtttgtcatctttgtgcagtgtggtttgtctttcttatttcgttcaggtatttgttcggtttagattg 891786  T
Q  512 tcagatc 518  Q
    |||||||    
T  891787 tcagatc 891793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 20745043 - 20744977
Alignment:
Q  464 gttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatcca 530  Q
    ||||||||| |||||||||||  ||| ||||||| ||||||||||||  ||||||| ||||| ||||    
T  20745043 gttgtttgtctttcttgtttcgtttatgtatttgttcggttcagattaacagatcaacttcgttcca 20744977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 7049165 - 7049206
Alignment:
Q  268 tttttctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    ||||||||||||| | |||||| |||||||||||||||||||    
T  7049165 tttttctcttttctctttctctcttgtgagccgtcaccaaaa 7049206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 30776627 - 30776690
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt 476  Q
    |||||||||||||||| ||| |||||||  ||||||||| || ||||||| ||||||||| ||||    
T  30776627 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatc-ttgtgcggcgttgtttgatttt 30776690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 5e-70; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 43029782 - 43029936
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  43029782 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 43029881  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  43029882 tcagatcagcttcgatccagtgcagatccaatcaatgactttggagtcatccacg 43029936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 1165411 - 1165257
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  1165411 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 1165312  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | |||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  1165311 ttagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 1165257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 28995323 - 28995170
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28995323 gtgattttgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcgcttcagattg 28995225  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28995224 tcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 28995170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 3088678 - 3088525
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||    
T  3088678 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattg 3088580  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  3088579 tcagatcatcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 3088525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 569
Target Start/End: Complemental strand, 29182623 - 29182468
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  29182623 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcggttcagattg 29182524  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacgctg 569  Q
    ||  |||||||| ||||||||||||||||||||||||  ||| | |||||||||||||    
T  29182523 tc--atcagctttgatccagtgcagatccaatcaatggctttagcgtcatccacgctg 29182468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 41882424 - 41882271
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  41882424 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 41882326  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||| |||||||||||||  ||||||||| ||||| ||||||||||    
T  41882325 tcagatcagcttcaatccagtgcagatttaatcaatgactttggcgtcatccacg 41882271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 22286765 - 22286612
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| ||||    
T  22286765 gtgatttcgtcgtcttcgcgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggcatttgatcgcttcatattg 22286667  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  22286666 tcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacg 22286612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 45664320 - 45664474
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||| |||||||||  ||||| |||| |||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  45664320 gtgatttcgttgtcttcgtgctacgttcgttttttcgtcatatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 45664419  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  45664420 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 45664474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 433 - 566
Target Start/End: Original strand, 50519904 - 50520036
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagt 532  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  50519904 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagt 50520002  T
Q  533 gcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||| |||||||||||||||| ||||||||||    
T  50520003 gcagattcaatcaatgattttggcgtcatccacg 50520036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 54240185 - 54240337
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||    
T  54240185 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 54240284  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatcca 564  Q
    | |||||||||||||| ||||||| ||||||||||||| ||||| | ||||||    
T  54240285 tgagatcagcttcgattcagtgcaaatccaatcaatgactttggcgacatcca 54240337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 33977939 - 33977786
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| |||    
T  33977939 gtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttgatcgcttcagtttg 33977841  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33977840 ttagatcagtttcgattcagtgcagatccaatcaatgactttggtgtcatccacg 33977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 47914608 - 47914454
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt-ctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  47914608 gtgatttcgtcgtcttcgtgcgacgttggtt-gtttgtcgtctttgtccgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagatt 47914510  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    || | |||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  47914509 gttatatcagcttcgattcagtgcagatccaatcaatgactttggcgtcatccacg 47914454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 413 - 566
Target Start/End: Complemental strand, 20201072 - 20200919
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    |||||||||||| |||||| ||| |||||||||| ||| |||||||| || |||||||||||||||||||||||| || |||||||||||||||||||||    
T  20201072 tgatttcgtcgttttcgtgcgacattggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgt 20200973  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||| ||| |||||||||||||||||||| || || ||| ||||||    
T  20200972 cagatcagcttcaatcaagtgcagatccaatcaatgacttcggcgtcttccacg 20200919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 413 - 566
Target Start/End: Complemental strand, 20203254 - 20203101
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    |||||||||||| |||||| ||| |||||||||| ||| |||||||| || |||||||||||||||||||||||| || |||||||||||||||||||||    
T  20203254 tgatttcgtcgttttcgtgcgacattggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgt 20203155  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||| ||| |||||||||||||||||||| || || ||| ||||||    
T  20203154 cagatcagcttcaatcaagtgcagatccaatcaatgacttcggcgtcttccacg 20203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 20251756 - 20251898
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| | |||||||||  ||||||| ||||||| ||||||||||| |||    
T  20251756 gtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgtgacgttatatgtttttctattttctctcaggtattcgatcggttcaggttg 20251855  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||    
T  20251856 tcagattagcttcgatccagtgcaaatccaatcaatgactttg 20251898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 43839533 - 43839378
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtcttt-gtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||||||||| |||||||| || ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||| ||| ||| |||||    
T  43839533 gtgatttcgtcatcttcgtgcgatgttggtttgttcgtcgtattttgtgcgacattgtttgtttttcttgtttctctcaggtatttaatcagtttagatt 43839434  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| ||||||| ||||||||||||||||||| | | ||| ||||||||||    
T  43839433 gtcagatcaacttcgattcagtgcagatccaatcaataactctggcgtcatccacg 43839378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 913331 - 913181
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||  ||||| ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||   || |||||||| |||||||||||||    
T  913331 gtgatttcgctgtcttagtgcggcattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagattg 913232  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  913231 tcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcatc 913181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 21803629 - 21803784
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttt--ttcttgtttctcttaggtatttgatcggttcagat 509  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||| |||  || |||||||||||||||||||||| |||||| ||    
T  21803629 gtgatttcgtagtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgtttttttttttgtttttgtttctcttaggtatttgattggttca-at 21803727  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||| ||||| ||||||||||||| ||||  ||||||||||    
T  21803728 tgttagatcagcttcgatcccgtgcaaatccaatcaatgactttgacgtcatccacg 21803784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 22844151 - 22844294
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| ||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||   | ||||||||| |||||||||||||    
T  22844151 gtgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattg 22844250  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| |||||||| |||||||||| ||||||||| |||||    
T  22844251 tcagatcaacttcgatcaagtgcagatcaaatcaatgactttgg 22844294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 35501774 - 35501632
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||| | |||||||||  ||||||| ||||||||||||||||||| |||    
T  35501774 gtgattttgtcgtcttcatgtgacgttagtttgttcatcgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcaggttg 35501675  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||| |||||||||||| |||| || |||||||||| ||||    
T  35501674 tcagattagcttcgatccaatgcaaattcaatcaatgactttg 35501632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 413 - 562
Target Start/End: Original strand, 40797133 - 40797282
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    |||||||| |||||| ||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||   |  |||||||| ||| ||||||||||    
T  40797133 tgatttcgccgtcttagtgagacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagattgt 40797232  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||| |||||||||| ||||||||| ||||| ||||||    
T  40797233 cagatcagcttcgatctagtgcagatcaaatcaatgactttggagtcatc 40797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 415 - 566
Target Start/End: Complemental strand, 7656527 - 7656381
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||| ||||||| |    
T  7656527 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgatattgtttgtctttcttgtttctctcaggtatttgatcggtttagattgtta 7656428  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| ||     | |||||||||||||||| ||| | ||||||||||    
T  7656427 gatcagctttga-----tacagatccaatcaatgactttagcgtcatccacg 7656381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 448 - 566
Target Start/End: Original strand, 11846684 - 11846801
Alignment:
Q  448 gtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaat 547  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||    
T  11846684 gtcgtctttgtgcgacgtttttt-tctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctttgatccgatgcatatccaatcaat 11846782  T
Q  548 gattttggtgtcatccacg 566  Q
    |||||||| ||||||||||    
T  11846783 gattttggcgtcatccacg 11846801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 32238011 - 32237869
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||| |||| ||| || |||||||||||||||||||||||||| |||||||||| ||||| |||||  | ||||||||| |||||||||||||    
T  32238011 gtgattttgtcatctttgtgcgatgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagattg 32237912  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||| ||||||||||| || |||||||||| ||||    
T  32237911 tcagatcagcttagatccagtgcacattcaatcaatgactttg 32237869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 4019694 - 4019840
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtt---tttcttgtttctcttaggtatttgatcggttcaga 508  Q
    |||||||||||||||| ||| |||||||  |||||||||||||||||||| |||||||| ||   ||| ||||||   | ||||||||| ||||||||||    
T  4019694 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcaga 4019793  T
Q  509 ttgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  4019794 ttgtcagatcagcttagatccagtgcagatccaatcaatgactttgg 4019840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 412 - 518
Target Start/End: Complemental strand, 14741340 - 14741234
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttg-tttctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||    
T  14741340 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagatt 14741242  T
Q  511 gtcagatc 518  Q
    ||||||||    
T  14741241 gtcagatc 14741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 418 - 555
Target Start/End: Original strand, 42106245 - 42106380
Alignment:
Q  418 tcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagat 517  Q
    |||||||||| ||| ||||||| |||||||||| ||||||  ||||||| ||||| ||||||||||   || |||||||| |||||||||||||||||||    
T  42106245 tcgtcgtctttgtgcgacgttgttttgttcgtcatctttg--cgacgttatttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagat 42106342  T
Q  518 cagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  42106343 cagcttcgatccagtgcagatcaaatcaatgactttgg 42106380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 412 - 558
Target Start/End: Complemental strand, 29776705 - 29776559
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||| |||| ||| |||||| ||||||||||||||||||| || |||||||||| |||||||||||  | ||||||||| ||||||  |||||    
T  29776705 gtgattttgtcatctttgtgcgacgtttgtttgttcgtcgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttttgattg 29776606  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgt 558  Q
    |||||||||||| ||| ||||||| ||||||||||| | ||||||||    
T  29776605 tcagatcagcttagattcagtgcaaatccaatcaataactttggtgt 29776559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 32089945 - 32089803
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||  ||||| ||||||||||||| | | |||||||| |||||||||||  | | ||||||| | |||| ||||||    
T  32089945 gtgatttcgtcgtcttagtgcgacattactttgtccgtcgtctttgtggggcattgtttgtctttcttgtttcgttcatgtatttgtttggtttagattg 32089846  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  32089845 tcatatcagcttcgatccagtgcagatccaatcaatgattttg 32089803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 25939494 - 25939351
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||| ||||  ||| ||||||| |||||| |||||||||||||| |||||||||| ||| |||||||  | || |||||| |  ||||||||||    
T  25939494 gtgatttcgttgtctcagtgcgacgttgttttgttagtcgtctttgtgcggcgttgtttgtctttgttgtttcgttcagatatttgttatgttcagattg 25939395  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    | |||||||||| ||| ||||||||||||||||||||| |||||    
T  25939394 ttagatcagcttagattcagtgcagatccaatcaatgactttgg 25939351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 21585998 - 21586140
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| ||||||||||| ||| |||||||||||| |  ||| |||||||| ||| ||||||   | ||||| ||| |||||||||||||    
T  21585998 gtgatttcgtcatcttagtgtgacgttgatttattcgtcgtctttttttgactttgtttgtcttttttgttttgttcaggtacttgttcggttcagattg 21586097  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||||| |||||||||| ||||||| ||||||||||||| ||||    
T  21586098 tcagaccagcttcgattcagtgcaaatccaatcaatgactttg 21586140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 22893730 - 22893587
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||| || |||||||||| |||||||||||  | || ||||||   |||||| ||||    
T  22893730 gtgatttcgtcttcttagtgcgacgttggtttgttcgtcatctttgtacggcgttgtttgtctttcttgtttcgttcagatatttgtatggttcatattg 22893631  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||| || || || ||||||||||||||| ||||||||| |||||    
T  22893630 tcatatgagttttgatccagtgcagatctaatcaatgactttgg 22893587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 448 - 566
Target Start/End: Original strand, 33076419 - 33076538
Alignment:
Q  448 gtcgtctttgtgcgacgttgtttgtttttct-tgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaa 546  Q
    ||||| || ||||||| |||||||||||  | ||||||| | |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  33076419 gtcgttttcgtgcgaccttgtttgttttcttgtgtttctttcaggtatttgatcggttcagattgttagattagctttgatccagtgcagatccaatcaa 33076518  T
Q  547 tgattttggtgtcatccacg 566  Q
    ||| ||||  ||||||||||    
T  33076519 tgactttgacgtcatccacg 33076538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 53426897 - 53427040
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||   ||||||||| |||||||| | | |||||||| ||||||||||   | ||||||||| |||||| ||||||    
T  53426897 gtgatttcgtcgtcttagtgcgacgttttgttgttcgtcatctttgtgtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagattg 53426996  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| ||||| |||  |||||||||||||||||||| |||||    
T  53426997 tcagataagcttagatatagtgcagatccaatcaatgactttgg 53427040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 549
Target Start/End: Complemental strand, 36540688 - 36540552
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| |||| |||||||||| ||| || ||||||||| |||||||||||  | | |||||||  ||||||||||||    
T  36540688 gtgatttcgtcgtcttagtgcgacgttgttttgatcgtcgtctt-gtgggatgttgtttgtctttcttgtttcattcaagtatttgtccggttcagattg 36540590  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    |||||||| ||||||| |||| |||||  |||||||||    
T  36540589 tcagatcaacttcgattcagtacagattaaatcaatga 36540552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 549
Target Start/End: Complemental strand, 40462010 - 40461873
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| || |||| ||||||||||||||||||||| |||||||||| |||||||||||    |  |||||||| |||||||||||    
T  40462010 gtgattttgtcgtcttagtgcgatgttgatttgttcgtcgtctttgtgcggcgttgtttgtctttcttgtttcatacatatatttgattggttcagattg 40461911  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    |||||| ||||| ||||   || |||||||||||||||    
T  40461910 tcagattagctttgatcatatgtagatccaatcaatga 40461873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 412 - 565
Target Start/End: Original strand, 34767084 - 34767238
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcg-tcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||| |||||||||| ||| || ||||||||  ||  ||||||||||| || ||||||||| |||||||||||  | | ||||||| || ||||| |||    
T  34767084 gtgatctcgtcgtctttgtgcgatgttggttttgtctatcgtctttgtgtgatgttgtttgtctttcttgtttcgttcaagtatttgttcagttcaaatt 34767183  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccac 565  Q
    |||||| || |||||||| |||||||||| ||| ||||||||||||||| |||||    
T  34767184 gtcagaacaacttcgatcaagtgcagatctaattaatgattttggtgtcgtccac 34767238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 422 - 554
Target Start/End: Original strand, 39340308 - 39340440
Alignment:
Q  422 cgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagc 521  Q
    |||||| ||| ||| ||| |||| |||||||||||||||| |||||||||| |||||||||||  | | ||||||| |||||| ||||||||| |||| |    
T  39340308 cgtcttagtgcgactttgttttgctcgtcgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgttcggtttagattgtcatatcaac 39340407  T
Q  522 ttcgatccagtgcagatccaatcaatgattttg 554  Q
    || |||| ||||| ||| |||||||||| ||||    
T  39340408 ttagatctagtgctgattcaatcaatgactttg 39340440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 548
Target Start/End: Original strand, 40365325 - 40365459
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||| ||||  || |||||||||||||| ||||||||||| || |||||||||||||| | | |||  ||||||||||| || ||| ||||||    
T  40365325 gtgattttgtcatcttaatgcgacgttggtttgtttgtcgtctttgtacggcgttgtttgttttt-tagattcgtttaggtatttgttcagtttagattg 40365423  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    ||||||||||||| ||||| | |||||| ||||||||    
T  40365424 tcagatcagcttcaatcca-tacagatcaaatcaatg 40365459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 553
Target Start/End: Complemental strand, 1220262 - 1220124
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| || |||| ||||||||||||||||||||| | |||||||| ||| |||||||  || |||||||| ||  ||||| |||    
T  1220262 gtgattttgtcgtcttagtgcgatgttgttttgttcgtcgtctttgtgcggctttgtttgtcttttttgtttcgtttgggtatttgttcatttcaggttg 1220163  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgatttt 553  Q
    ||| ||||||||   | |||| ||||| ||||||||||||||    
T  1220162 tcatatcagctt---tgcagtacagattcaatcaatgatttt 1220124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 445 - 562
Target Start/End: Original strand, 37051728 - 37051843
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgttttt--cttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaa 542  Q
    ||||||||||| |||||||||||||||| |||  | || |||    |||| |||| ||| |||||||||||||||||| |||||||||||||||||||||    
T  37051728 ttcgtcgtcttagtgcgacgttgtttgtcttttccatggttc----aggtgtttgctcgattcagattgtcagatcagtttcgatccagtgcagatccaa 37051823  T
Q  543 tcaatgattttggtgtcatc 562  Q
     |||| | ||||| ||||||    
T  37051824 ccaataactttggcgtcatc 37051843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 50460290 - 50460424
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||| ||| ||| || |||| ||||||||| |||||||||    ||||||||| |||||| ||||  | || |||||| |||||| ||||||    
T  50460290 gtgattttgtcgccttagtgcgatgttgttttgttcgttgtctttgtgttt-gttgtttgtctttcttatttcgttcagttatttgttcggtttagattg 50460388  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaat 547  Q
    ||||||||| ||||||||| |||| |||||||||||    
T  50460389 tcagatcagtttcgatccaatgcaaatccaatcaat 50460424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 549
Target Start/End: Complemental strand, 48061027 - 48060967
Alignment:
Q  489 aggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    ||||||||| ||||||||||||||||||| || ||||||| |||||| |||||||||||||    
T  48061027 aggtatttgttcggttcagattgtcagattagtttcgatctagtgcaaatccaatcaatga 48060967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 559
Target Start/End: Original strand, 2598210 - 2598324
Alignment:
Q  444 gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaat 543  Q
    |||| |||||||||||| ||||||||| | |||||||||||  | | ||||||| |||||| ||| | | |||||| ||| |||  ||||||||||||||    
T  2598210 gttcatcgtctttgtgcaacgttgtttctctttcttgtttcgttcatgtatttgttcggtttagagttt-agatcaactttgatttagtgcagatccaat 2598308  T
Q  544 caatgattttggtgtc 559  Q
    |||||| |||||||||    
T  2598309 caatgactttggtgtc 2598324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 503 - 569
Target Start/End: Original strand, 27831289 - 27831355
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacgctg 569  Q
    ||||||||||||||||||||| |||| |||||||||| |||| |||| ||||| ||| |||||||||    
T  27831289 ttcagattgtcagatcagctttgatctagtgcagatctaatccatgactttggcgtcgtccacgctg 27831355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 549
Target Start/End: Original strand, 43242936 - 43243044
Alignment:
Q  441 tttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcc 540  Q
    |||||| | |||||||||| | | |||||||||||| |||||||  | ||||||||  |||| ||||||||||| |||| ||| |||  ||||||||||     
T  43242936 tttgtttgccgtctttgtggggctttgtttgtttttattgtttcattcaggtatttattcggctcagattgtcatatcaactttgatatagtgcagatca 43243035  T
Q  541 aatcaatga 549  Q
    |||||||||    
T  43243036 aatcaatga 43243044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 33070253 - 33070388
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||| ||||||||||| |||| || ||| ||||||| ||||||||||| |||||||| ||| |||   || |  ||||||| |||| |  ||||| ||||    
T  33070253 gtgaattcgtcgtcttagtgtaaccttgttttgttcctcgtctttgtgggacgttgtatgtcttttccgtctaacttaggtgtttgttttgttcaaattg 33070352  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaat 547  Q
    ||| | |||||||||| ||||||| ||| |||||||    
T  33070353 tcataacagcttcgatgcagtgcaaatcaaatcaat 33070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 27706361 - 27706304
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    |||||||||||||||| |||||||||||  |||||||||||| ||||||| ||||||||    
T  27706361 gtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtc-ttgtgcggcgttgttt 27706304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 42106212 - 42106269
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    |||||||| |||||| ||| ||||||| |||  |||||||||||||||||||||||||    
T  42106212 tgatttcgccgtcttagtgcgacgttgtttttatcgtcgtctttgtgcgacgttgttt 42106269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 21803449 - 21803489
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  21803449 ttttctcttttccctttctctcttgtgagccgtcaccaaaa 21803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 25374085 - 25374013
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttc 484  Q
    ||||||||  |||||| ||| ||| ||||||||||  |||||| ||||||||||||||| | |||||||||||    
T  25374085 gtgatttctccgtcttagtgcgactttggtttgtttatcgtctatgtgcgacgttgtttttctttcttgtttc 25374013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 7546567 - 7546625
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||| |||||||||    
T  7546567 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcggcgttgtttg 7546625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 554
Target Start/End: Complemental strand, 25374006 - 25373955
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  25374006 ttcagatcgtcagatcaacttcgatccagtgcatatctaatcaatgactttg 25373955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 555
Target Start/End: Original strand, 26412466 - 26412532
Alignment:
Q  491 gtatttgatcggttcagattgtcagatcagcttcgatccagtg--cagatccaatcaatgattttgg 555  Q
    ||||||| ||||||||||||||||||| |  ||||||||||||  || ||||||||||||| |||||    
T  26412466 gtatttgttcggttcagattgtcagattaaattcgatccagtgcacatatccaatcaatgagtttgg 26412532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 35670594 - 35670654
Alignment:
Q  494 tttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||| ||| |||||||||| |||| | |||||||||| |||| ||||||||||||| ||||    
T  35670594 tttgttcgattcagattgttagataaacttcgatccaatgcatatccaatcaatgactttg 35670654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 51923680 - 51923743
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt 476  Q
    |||||||||||||||| |||||||||||  ||||||||| || ||||||| |||| |||| ||||    
T  51923680 gtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatc-ttgtgcggcgttatttgatttt 51923743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 5e-70; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 7640371 - 7640217
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  7640371 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 7640272  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7640271 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 7640217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 25771544 - 25771698
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  25771544 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 25771643  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25771644 ttagatcagcttcgatccagtgtagatccaatcaatgattttggcgtcatccacg 25771698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 27024154 - 27024000
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  27024154 gtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcaattcagattg 27024055  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  27024054 tcagatcagcttcgatccagtgcagatccaatcaatgactttggagtcatccacg 27024000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 43566973 - 43567126
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||    
T  43566973 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattg 43567071  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43567072 tcagatcagcttcgatccagtgcagatccaatcaatgactttggtgtcatccacg 43567126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 5930522 - 5930676
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||    
T  5930522 gtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtttttgtgcgacgttgtttgtttttcttgtttctatcatgtatttgatcggttcagattg 5930621  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5930622 tgagatcagcttcgatccagtgcagatccaatcaatgattttggtgttatccacg 5930676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 416 - 549
Target Start/End: Original strand, 44951522 - 44951655
Alignment:
Q  416 tttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcag 515  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44951522 tttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcag 44951621  T
Q  516 atcagcttcgatccagtgcagatccaatcaatga 549  Q
    ||||||||||||||||||||||||||||||||||    
T  44951622 atcagcttcgatccagtgcagatccaatcaatga 44951655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 27191351 - 27191198
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27191351 gtgatttcgtcgtcttcgtacgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 27191253  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  27191252 tcagatcagcttcgatccagtgtagatccaatcaatgactttggcgtcatccacg 27191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 27841165 - 27841012
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27841165 gtgatttcgtcgtcttcgtacgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 27841067  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  27841066 tcagatcagcttcgatccagtgtagatccaatcaatgactttggcgtcatccacg 27841012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 36508029 - 36508182
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  36508029 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgttgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattg 36508127  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  36508128 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 36508182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 25516592 - 25516745
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  25516592 gtgatttcttcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 25516690  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  25516691 tcagatcagcttcaatccagtgcagatccaatcaatgactttggcgtcatccacg 25516745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 412 - 541
Target Start/End: Complemental strand, 16879980 - 16879851
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16879980 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 16879881  T
Q  512 tcagatcagcttcgatccagtgcagatcca 541  Q
    |||||||| |||||||||||||||||||||    
T  16879880 tcagatcaacttcgatccagtgcagatcca 16879851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 412 - 541
Target Start/End: Complemental strand, 16992113 - 16991984
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16992113 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 16992014  T
Q  512 tcagatcagcttcgatccagtgcagatcca 541  Q
    |||||||| |||||||||||||||||||||    
T  16992013 tcagatcaacttcgatccagtgcagatcca 16991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 38822172 - 38822323
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  38822172 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattg 38822270  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatcca 564  Q
     |||||  |||||||||||||||||||||||||||||| ||||  ||||||||    
T  38822271 ccagatttgcttcgatccagtgcagatccaatcaatgactttgacgtcatcca 38822323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 6089990 - 6090143
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| || ||||||| |||| || |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  6089990 gtgatttcgtcgtcttcgtgcgatgttggtt-gttcatcttctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcgcttcagattg 6090088  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  6090089 tcagatcagcttcgatccagtgcatatccaatcaatgactttagtgtcatccacg 6090143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 424 - 566
Target Start/End: Original strand, 41176970 - 41177111
Alignment:
Q  424 tcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagctt 523  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||    
T  41176970 tcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcaaattgtcagatcagctt 41177068  T
Q  524 cgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  41177069 cgatccagtgcagatccaatcaatgactttggcgtcatccacg 41177111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 420 - 566
Target Start/End: Complemental strand, 43929307 - 43929161
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||    
T  43929307 gtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttgatcggttcagattgttagatca 43929208  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | ||||||| ||||||||| |||||||||| ||||| ||||||||||    
T  43929207 gtttcgatcaagtgcagattcaatcaatgactttggcgtcatccacg 43929161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 44167725 - 44167572
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||| ||||    
T  44167725 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttcgctcagctatttgatcgcttcaaattg 44167627  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||    
T  44167626 tcagatcagcttcaatccagtgcagatccaatcaatgactttgacgtcatccacg 44167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 445 - 566
Target Start/End: Original strand, 3465061 - 3465182
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3465061 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatccaatc 3465160  T
Q  545 aatgattttggtgtcatccacg 566  Q
    ||||||||||| ||||||||||    
T  3465161 aatgattttggcgtcatccacg 3465182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 3390531 - 3390676
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         |||| |||||||||||| ||||||||||    
T  3390531 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttt---------ctctcaggtatttgatcagttcagattg 3390621  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  3390622 tcagataagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 3390676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 3603084 - 3603236
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||| || ||||||||| ||||| ||||    
T  3603084 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttggtttgtttctctcagatatttgatccgttcaaattg 3603183  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatcca 564  Q
      | |||| ||||||||||||||||||||||||||||| ||||  ||||||||    
T  3603184 ctatatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatcca 3603236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 420 - 555
Target Start/End: Complemental strand, 4878743 - 4878608
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||||||| ||| || |||| |||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||| ||||    
T  4878743 gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatca 4878644  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||| ||||||||| |||||    
T  4878643 gcttcgatccagtgcagatcaaatcaatgactttgg 4878608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 7443581 - 7443431
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||   |  |||||||| |||||||||||||    
T  7443581 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattg 7443482  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    | ||||||||||| |||||||||||||| ||||||||| ||||| ||||||    
T  7443481 taagatcagcttcaatccagtgcagatcaaatcaatgactttggagtcatc 7443431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 417 - 562
Target Start/End: Original strand, 10589199 - 10589344
Alignment:
Q  417 ttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcaga 516  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||   |  |||||||| |||||||||| |||||||    
T  10589199 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcaga 10589298  T
Q  517 tcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||| ||||||||||||||| ||||||||| ||||| ||||||    
T  10589299 tcagctttgatccagtgcagatcaaatcaatgactttggagtcatc 10589344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 417 - 566
Target Start/End: Complemental strand, 16720858 - 16720709
Alignment:
Q  417 ttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcaga 516  Q
    ||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||||| || | ||||||||| |||||||||||| ||| |    
T  16720858 ttcgtcgtctttgtgcgacgttagtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgttcggttcagattatcaaa 16720759  T
Q  517 tcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||| ||||  |||||||||||||||| ||||||||  |||||||||    
T  16720758 tcagctttgatctcgtgcagatccaatcaacgattttggcttcatccacg 16720709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 19581017 - 19580874
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||   | ||||||||| ||| |||||||||    
T  19581017 gtgattttgtcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagattg 19580918  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||    
T  19580917 tcagatcagcttcgatccagtgcatatcaaatcaatgactttgg 19580874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 26491401 - 26491543
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| ||||||  ||||||||||| |||||||||||| |||||||||||  ||  ||||||| ||| |||||||||    
T  26491401 gtgatttcgtcgtcttagtgcgacgttgttttgtttttcgtctttgtgtgacgttgtttgtgtttcttgtttc-gttcagtatttgttcgattcagattg 26491499  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||    
T  26491500 tcagatcagcttcgatctagtgcagatcaaatcaatgactttgg 26491543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 412 - 549
Target Start/End: Original strand, 24500586 - 24500723
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||| ||  |||||||||||||||||||||||||||||||| ||||||||||   | | ||||||| ||||||||||||     
T  24500586 gtgatttggtcgtcttagtgcgaccttattttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagatta 24500685  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  24500686 tcagatcagcttcgatccagtgcagatcaaatgaatga 24500723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 25623060 - 25622917
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||||||| ||| |||||||  || ||||||||  ||||||||||||    
T  25623060 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagatt 25622961  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||| |||||||| ||| |||||||||| |||||||||| ||||    
T  25622960 gtcatatcagcttagattcagtgcagattcaatcaatgactttg 25622917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 555
Target Start/End: Original strand, 37883756 - 37883895
Alignment:
Q  416 tttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcag 515  Q
    |||||| ||||| ||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||  | | ||||||| ||| ||||||||||||     
T  37883756 tttcgttgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcat 37883855  T
Q  516 atcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| |||||| |||||||| ||||||||| |||||    
T  37883856 atcagctttgatccaatgcagatcaaatcaatgactttgg 37883895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 29734289 - 29734432
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||||||||||| |||||| |||||| |||| |||||||||||||  |||| |||||  | | | ||||| ||| |||||||||    
T  29734289 gtgattttgtcgtcttagtgtgacgttgttttgtttgtcgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagattg 29734388  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||    
T  29734389 tcagatcaacttcgatccagtgcagatcaaatcaatgactttgg 29734432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 29812629 - 29812487
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||| | |||||||||||||||||||||  ||||||| | |||||||||||  | |||||| || ||||||| |||||    
T  29812629 gtgatttcgtcgtcttagtgcgacgt-gttttgttcgtcgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggattg 29812531  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    | | ||||| || |||||||||||||||||||||||||||||||    
T  29812530 ttatatcagtttagatccagtgcagatccaatcaatgattttgg 29812487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 555
Target Start/End: Original strand, 13268679 - 13268814
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||| | |||||   |||||||||  ||| |||||||||||||||||    
T  13268679 gtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttttcgtttcgtctaggtatttattcgattcagattgtcagatca 13268778  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttgg 555  Q
     ||| |||||| |||| |||||||||| || |||||    
T  13268779 actttgatccaatgcatatccaatcaacgactttgg 13268814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 413 - 555
Target Start/End: Original strand, 28228322 - 28228464
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    ||||||||| ||| | ||| || ||||||||||||||  ||||||||||   |||||||| |||||||||||  | | ||||||| ||||||||||||||    
T  28228322 tgatttcgttgtcatagtgcgatgttggtttgttcgttatctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgt 28228421  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    || |||||||| |||||| |||||||||||||||||| |||||    
T  28228422 catatcagctttgatccaatgcagatccaatcaatgactttgg 28228464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 555
Target Start/End: Complemental strand, 15673949 - 15673840
Alignment:
Q  446 tcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatca 545  Q
    ||||||||||||||||||||||||||| |||||||||||  | |||| |||| ||| |||||||||||| |||||||||||||||||  ||||| |||||    
T  15673949 tcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcagcttcgatccagtatagatcaaatca 15673850  T
Q  546 atgattttgg 555  Q
    |||| |||||    
T  15673849 atgactttgg 15673840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 413 - 549
Target Start/End: Complemental strand, 25237340 - 25237209
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||     ||||  |  |||||||| ||| ||||| |||     
T  25237340 tgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtttt-----tttcgttcgggtatttgttcgattcaggttgc 25237246  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  25237245 cagatcagcttcaatccagtgcagattcaatcaatga 25237209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 2251360 - 2251212
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt---cttgtttctcttaggtatttgatcggttcaga 508  Q
    |||||||||||||||| ||| |||| || |||||| ||||||||||||||||||||||||| |||   ||||||      |||| |||| ||  ||||||    
T  2251360 gtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttgttg-----aggtgtttgttcaattcaga 2251266  T
Q  509 ttgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  2251265 ttgtcagatcagcttcgatccagtgcaaatccaaccaatgactttggcgtcatc 2251212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 9715559 - 9715416
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||   |||||| |||||| ||| |||||||||| | |||||||| |||||||||||  | ||||||||| | |||||| ||||    
T  9715559 gtgatttcgtcgtcttagtacaacgttgatttgtttgtcatctttgtgcggcattgtttgtctttcttgtttcgttcaggtatttgtttggttcaaattg 9715460  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||| ||||| ||| |||||||||| ||||||||||||| |||||    
T  9715459 tcatatcagattcaatccagtgcatatccaatcaatgactttgg 9715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 463 - 555
Target Start/End: Original strand, 20036532 - 20036624
Alignment:
Q  463 cgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||| |||||||||||  | ||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  20036532 cgttgtttgtctttcttgtttcgttcaggtatttgttcagttcagattgtcagattggcttcgatccagtgcagatccaatcaatgactttgg 20036624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 19953672 - 19953810
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    ||||||||||||| ||  |||||||  ||||| |||||||||||||| |||||||||| ||||||||||   | | ||||||| ||||||||||||||||    
T  19953672 atttcgtcgtcttagtacgacgttgtgttgtttgtcgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagattgtca 19953771  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||||| |||  ||||| ||||||| |||||||||| ||||    
T  19953772 gatcatcttaaatccaatgcagat-caatcaatgactttg 19953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 434 - 555
Target Start/End: Complemental strand, 11550589 - 11550467
Alignment:
Q  434 acgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtg 533  Q
    |||||| |||||| |||||||||||||| |||| ||||| |||||||||||  | | ||||||| |||||||||||||||||| || ||| |||||||||    
T  11550589 acgttgttttgtttgtcgtctttgtgcggcgttttttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcagaacaacttagatccagtg 11550490  T
Q  534 cagatcc-aatcaatgattttgg 555  Q
     |||||| ||||||||| |||||    
T  11550489 tagatccaaatcaatgactttgg 11550467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 5071385 - 5071235
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||||||||| |||| |||  |||||| |||||| |||||||||||||||| |||||||| ||||||   || | | |||| |||| ||||||||||||    
T  5071385 gtgatttcgtcatcttagtgcaacgttgttttgtttgtcgtctttgtgcgactttgtttgtcttttctctcttgt-tcaggtgtttgttcggttcagatt 5071287  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||| |||||||| |||| |||||||| | |||| ||||| ||||||    
T  5071286 gtcagatcaacttcgatctagtgtagatccaaccgatgactttggcgtcatc 5071235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 17068927 - 17068789
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    |||| |||||||| ||| ||||||| |||||||||||||||||||||  ||||||||| ||| |||||||  || ||||||| ||   || | ||||| |    
T  17068927 attttgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtattt-attcctttaaattgtta 17068829  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||| |||||||||||||| || |||||||||||    
T  17068828 gatcagcttcaatccagtgcagatcaaaacaatgattttg 17068789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 17118817 - 17118687
Alignment:
Q  423 gtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagct 522  Q
    ||||| ||| ||||||| |||||||||||||||||||||  ||||||||| ||| |||||||  || ||||||| ||   || |||||||||||||||||    
T  17118817 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtattt-attcctttagattgtcagatcagct 17118719  T
Q  523 tcgatccagtgcagatccaatcaatgattttg 554  Q
    || ||| |||||||||| || |||||||||||    
T  17118718 tcaatctagtgcagatcaaaacaatgattttg 17118687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 35353742 - 35353889
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||| | | |||| | | ||  ||  |||| |||| || | | ||||||    
T  35353742 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgtt-tgtcttttccctcttgttc--aggtgtttgttcagattagattg 35353838  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||| |||||||||||||||||||||| |||||| ||||| ||||||    
T  35353839 tcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatc 35353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 41842047 - 41842118
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  41842047 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgctgcgttgtttgtctttcttgttt 41842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 17074924 - 17074786
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    |||| |||||||| ||| ||||||| ||||| |||||||||||||||  ||||||||| ||| |||||||  || ||||||| ||   || | ||||| |    
T  17074924 attttgtcgtcttagtgcgacgttgttttgtccgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtattt-attcctttaaattgtta 17074826  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||| |||||||||||||| || |||||||||||    
T  17074825 gatcagcttcaatccagtgcagatcaaaacaatgattttg 17074786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 522
Target Start/End: Original strand, 40125488 - 40125598
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||| |||| |||  |||||| ||||||  |||||||||||||||||| ||||| |||||||||||  | ||||||||  ||| |||||||||    
T  40125488 gtgattttgtcatcttagtgcaacgttgttttgtttttcgtctttgtgcgacgttctttgtctttcttgtttcgttcaggtatttattcgattcagattg 40125587  T
Q  512 tcagatcagct 522  Q
    |||||||||||    
T  40125588 tcagatcagct 40125598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 17095497 - 17095359
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    |||| |||||||| ||| ||||||| ||||||||||||||||||||   ||||||||| ||| |||||||  || ||||||| ||   || ||||||| |    
T  17095497 attttgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcagtgttgtttgtcttttttgtttcgtttgggtattt-attcctttagattgtta 17095399  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||| ||| |||||||||| || |||| ||||||    
T  17095398 gatcagcttcaatctagtgcagatcaaaacaattattttg 17095359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 43929371 - 43929316
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttg 467  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  43929371 gtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtcttcgtgcgacgttg 43929316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 3397994 - 3397844
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctt----aggtatttgatcggttcag 507  Q
    |||||||||||||||| ||| ||| ||| |||||  ||| ||||||||||||    ||||||| |||| |  |||||    |||| |||| ||  |||||    
T  3397994 gtgatttcgtcgtctttgtgcgacattgttttgtctgtcatctttgtgcgac----tttgtttatcttttccctcttgttcaggtgtttgttcaattcag 3397899  T
Q  508 attgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  3397898 attgtcagatcatcttcgatccagtgcagattcaaccaatgactttggcgtcatc 3397844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 10589176 - 10589224
Alignment:
Q  422 cgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  10589176 cgtcttagtgtgacgttgttttgttcgtcgtctttgtgcgacgttgttt 10589224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 555
Target Start/End: Complemental strand, 42105727 - 42105637
Alignment:
Q  464 gttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||  |||||||  | ||||||||| ||| |||| ||||||| |||||||||||| ||||||||||| ||||||||| |||||    
T  42105727 gttgtttgttttg-ttgtttcgttcaggtatttgttcgattcaaattgtcaaatcagcttcgattcagtgcagatcaaatcaatgactttgg 42105637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 43929338 - 43929288
Alignment:
Q  417 ttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttg 467  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  43929338 ttcgtcgtcttcgtgcgacgttggtttgtttgtcgtcttcgtgcgacgttg 43929288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 803021 - 802956
Alignment:
Q  494 tttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    |||| |||||||||||||| ||| || |||||||| |||||||||| ||||||||| |||||||||    
T  803021 tttgttcggttcagattgttagaccatcttcgatcaagtgcagatctaatcaatgactttggtgtc 802956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 3602904 - 3602960
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    |||||||||||||| |||||| ||||||||||||||||||||  |||||| ||||||    
T  3602904 ttttctcttttccctttctctcttgtgagccgtcaccaaaatcctagtttcttctcc 3602960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 504
Target Start/End: Original strand, 11931013 - 11931105
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggtt 504  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||| ||  |  ||||||||| ||| |||||||  |||| |||||| ||||||    
T  11931013 gtgatttcatcgtcttagtgtgacgttggtttgttcgttgtcttcgtaaggagttgtttgtcttttttgtttcgtttagatatttgttcggtt 11931105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 31269110 - 31269050
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 472  Q
    |||||||||||||||| ||| ||| ||| |||||||||| ||||||||||| |||||||||    
T  31269110 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcttctttgtgcgatgttgtttgt 31269050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 562
Target Start/End: Complemental strand, 31125319 - 31125244
Alignment:
Q  487 ttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||| |||| ||| |||||||||||| |||| |||||||  |||| ||||||||||||||| ||||| ||||||    
T  31125319 ttaggtgtttgttcgattcagattgtcatatcaacttcgatttagtgtagatccaatcaatgactttggcgtcatc 31125244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 497
Target Start/End: Complemental strand, 44562644 - 44562561
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttg 497  Q
    |||||||||| ||||  |||||| ||||||||||||||||||||||||||  ||||||| | |||||| ||||  ||||| |||||    
T  44562644 gtgatttcgtagtct--gtgtgatgttggtttgttcgtcgtctttgtgcggtgttgtttatctttcttatttcgtttagggatttg 44562561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 15786484 - 15786435
Alignment:
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    |||||||||| ||||||||||||||||||  ||||||||||||| |||||    
T  15786484 tgtcagatcaacttcgatccagtgcagatgaaatcaatgattttagtgtc 15786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 45033151 - 45033207
Alignment:
Q  501 ggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtg 557  Q
    ||||||||||||| ||| ||||| ||| |||||||||| |||||||| |||||||||    
T  45033151 ggttcagattgtcggattagctttgattcagtgcagattcaatcaataattttggtg 45033207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 460
Target Start/End: Complemental strand, 16720918 - 16720871
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgc 460  Q
    ||||||||||||||| ||| |||||||||||||||| |||| ||||||    
T  16720918 tgatttcgtcgtctttgtgcgacgttggtttgttcgccgtccttgtgc 16720871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 554
Target Start/End: Complemental strand, 17056444 - 17056342
Alignment:
Q  451 gtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgat 550  Q
    |||||||||||  ||||||||| ||| |||||||  || |||||||  ||  || | ||||| ||||||||||| |||||||||||||| || |||||||    
T  17056444 gtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaa-attgttagatcagcttcaatccagtgcagatcaaaacaatgat 17056346  T
Q  551 tttg 554  Q
    ||||    
T  17056345 tttg 17056342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 554
Target Start/End: Complemental strand, 17084427 - 17084325
Alignment:
Q  451 gtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgat 550  Q
    |||||||||||  ||||||||| ||| |||||||  || |||||||  ||  || | ||||| ||||||||||| |||||||||||||| || |||||||    
T  17084427 gtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaa-attgttagatcagcttcaatccagtgcagatcaaaacaatgat 17084329  T
Q  551 tttg 554  Q
    ||||    
T  17084328 tttg 17084325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 555
Target Start/End: Complemental strand, 31262880 - 31262825
Alignment:
Q  500 cggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||||||||||| ||| |||||| || ||||||| || |||||    
T  31262880 cggttcagattgtcagatcagcttcaatcgagtgcaaattcaatcaacgactttgg 31262825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 16720867 - 16720837
Alignment:
Q  436 gttggtttgttcgtcgtctttgtgcgacgtt 466  Q
    |||||||||||||||||||||||||||||||    
T  16720867 gttggtttgttcgtcgtctttgtgcgacgtt 16720837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 32347607 - 32347551
Alignment:
Q  502 gttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    ||||||||||||||||||| ||||||| |||  |||||||||||| || |||||||||    
T  32347607 gttcagattgtcagatcaggttcgatctagtatagatccaatcaa-gactttggtgtc 32347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 2e-69; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 412 - 565
Target Start/End: Complemental strand, 8054822 - 8054669
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  8054822 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 8054723  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccac 565  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  8054722 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccac 8054669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 44295415 - 44295569
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  44295415 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 44295514  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  44295515 tcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacg 44295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 14115843 - 14115689
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14115843 gtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 14115744  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  14115743 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 14115689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 412 - 544
Target Start/End: Original strand, 9270120 - 9270252
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9270120 gtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 9270219  T
Q  512 tcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||| |||||||||||||||||||||||||||||    
T  9270220 tcatatcagcttcgatccagtgcagatccaatc 9270252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 16996903 - 16996750
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  16996903 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattg 16996805  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||| || |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16996804 tcagttcggcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 16996750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 32412889 - 32413039
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||    
T  32412889 gtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttgattggttcagattg 32412988  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  32412989 tcagatcagcttcgatcctgtgcagatccaatcaatgactttggcgtcatc 32413039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 41996644 - 41996796
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||| |||||| |||||||||||||||||||||||    
T  41996644 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt--ttgtctttcttgattctctcaggtatttgatcggttcagattg 41996741  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  41996742 tcagatcagcttcgattcagtgcagatccaatcaatgactttggcgtcatccacg 41996796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 5457170 - 5457324
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  5457170 gtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgtcttcgtgcgacgttgtttgtctttcttgtttctctcaagtatttgatcggttcagattg 5457269  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||| |||||||||||||||||| | ||||  ||||||||||    
T  5457270 tcagatcagcttcgatctagtgcagatccaatcaataactttgccgtcatccacg 5457324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 9992766 - 9992920
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  9992766 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgtgacattgtttgtttttcttgtttctcttagatatttgatcggttcaaattg 9992865  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||| |||||| ||||| ||||||||||||||| || ||||| ||||||||||    
T  9992866 tcagataagcttcaatccaatgcagatccaatcaacgactttggcgtcatccacg 9992920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 37129688 - 37129536
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||||||||    
T  37129688 gtgatttcgtcgtctt-gtgcgacgttggtt-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgaacgcttcagattg 37129591  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  37129590 tcagatcagcttcgatcaagtgcagatccaatcaatgactttggcgtcatccacg 37129536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 32104853 - 32104718
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||  |||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  32104853 gtgatttcgtcgtcttcgtacgacgttggtttgtttgtcatctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 32104754  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaat 547  Q
    ||||||||| ||||||||||||||||| ||||||||    
T  32104753 tcagatcagtttcgatccagtgcagattcaatcaat 32104718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 412 - 538
Target Start/End: Original strand, 31874183 - 31874309
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  31874183 gtgattttgtcgtctttgtgcaacgttggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 31874282  T
Q  512 tcagatcagcttcgatccagtgcagat 538  Q
    ||||| || ||||||||||||||||||    
T  31874283 tcagaacatcttcgatccagtgcagat 31874309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 420 - 555
Target Start/End: Complemental strand, 31713083 - 31712948
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||||||| ||| || |||| |||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||| ||||    
T  31713083 gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatca 31712984  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||| ||||||||| |||||    
T  31712983 gcttcgatccagtgcagatcaaatcaatgactttgg 31712948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 37659065 - 37659207
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||| ||||| ||| ||| ||| |||||||||||||||||| ||||||||||||  |||||||||||  | | ||||||| |||||||||||||    
T  37659065 gtgatttcgttgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagattg 37659164  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  37659165 tcagatcagcttcgatccagtgcagatcaaatcaatgactttg 37659207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 36545796 - 36545653
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||| | |||||||||  ||||||| ||||||||||||| ||||| |||    
T  36545796 gtgattttgtcgtctttgtgcgacgttggtttgttagtcgtctttgtgcgacgttctatgtttttctattttctctcaggtatttgatcgattcaggttg 36545697  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| ||||| ||||||||||| | ||||||||||| |||||    
T  36545696 tcagattagctttgatccagtgcaaacccaatcaatgactttgg 36545653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 413 - 549
Target Start/End: Original strand, 26937625 - 26937761
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    |||||| |||||||| ||| | ||||||||||||||||| ||||||||| |||||||||| |||||||||||  | ||||||||  ||||||||||||||    
T  26937625 tgattttgtcgtcttagtgcgtcgttggtttgttcgtcgactttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagattgt 26937724  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    ||||||||||| |||| |||||| |||||||||||||    
T  26937725 cagatcagctttgatctagtgcaaatccaatcaatga 26937761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 413 - 562
Target Start/End: Original strand, 15665639 - 15665788
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    ||||||||||||||| ||| || ||||  ||||| |||||||||||||  |||||||||| | || |||||   | ||||||||| ||||||||||||||    
T  15665639 tgatttcgtcgtcttagtgagatgttgtgttgtttgtcgtctttgtgcagcgttgtttgtctatcctgttttgttcaggtatttgttcggttcagattgt 15665738  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  15665739 caggtcagcttagatccagtgcagatccaatcaatgactttggtgtcatc 15665788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 12248729 - 12248583
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| ||| ||||||||     
T  12248729 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagatta 12248630  T
Q  512 tca---gatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||   ||||| |||||| |||||||||||| ||||||||| |||||    
T  12248629 tcagatgatcaacttcgaaccagtgcagatcaaatcaatgactttgg 12248583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 3925705 - 3925562
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| |||  || ||| ||| ||||||||||||||||||| |||||||  |||||||||||  | ||||||||| ||| ||||||| |    
T  3925705 gtgatttcgtcgtcttagtgcaaccttgtttttttcgtcgtctttgtgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagatag 3925606  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||    
T  3925605 tcagatcagcttcgatcaagtgcagatcaaatcaatgactttgg 3925562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 559
Target Start/End: Original strand, 5989729 - 5989876
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||||| || ||| ||||||||| ||||||||||||||||||| |||||||||| |||||| |||| || | ||||||  |||||||||||||    
T  5989729 gtgattttgtcgttttagtgcgacgttggtatgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgctcaagtatttcttcggttcagattg 5989828  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    |||| ||| ||||||| |||||||||| |||||||||| ||| |||||    
T  5989829 tcaggtcaacttcgattcagtgcagattcaatcaatgacttttgtgtc 5989876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 16937354 - 16937211
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| ||||||| ||||||||||||||| |||||||  |||| ||||||  | ||||||||| |  ||||||||||    
T  16937354 gtgatttcgtcgtcttagtgcgaccttgttttgttcatcgtctttgtgcgacattgtttgcctttcgtgtttcgttcaggtatttgtttagttcagattg 16937255  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||    
T  16937254 tcagatcagcttcgatccagtgcatatcaaatcaatgactttgg 16937211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 17019217 - 17019360
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||   ||||||||| |||||||||||   || ||||||| |||| |||||||     
T  17019217 gtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattt 17019316  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| | ||| |||||| ||||||||||||||||||||||||    
T  17019317 tcagattaactttgatccaatgcagatccaatcaatgattttgg 17019360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 17549654 - 17549797
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||   ||||||||| |||||||||||   || ||||||| |||| |||||||     
T  17549654 gtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattt 17549753  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||| | ||| |||||| ||||||||||||||||||||||||    
T  17549754 tcagattaactttgatccaatgcagatccaatcaatgattttgg 17549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 454 - 555
Target Start/End: Original strand, 5328095 - 5328194
Alignment:
Q  454 tttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgatttt 553  Q
    |||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||    
T  5328095 tttgtgcgacgttgtttgtttttcttgtctctc--aagtatttgatcggttcagattgtcagatcagctttgatctagtgcagatccaatcaatgacttt 5328192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 413 - 547
Target Start/End: Original strand, 10042872 - 10043006
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    ||||||||||||||| |||  |||||| ||||||||| ||||| |||||||||| ||||| |||||||||||  | ||||||||| || ||||| |||||    
T  10042872 tgatttcgtcgtcttagtgcaacgttgttttgttcgttgtcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgttcagttcaaattgt 10042971  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaat 547  Q
    |||||||||||||||| |||||||||| |||||||    
T  10042972 cagatcagcttcgatctagtgcagatcaaatcaat 10043006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 2629011 - 2629153
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||| || ||| ||||||  ||||| |||| |||||||||||| |||||||| |||||||||||  | ||| ||||| | ||| |||||||    
T  2629011 gtgatttcgtcgttttagtgcgacgttattttgtccgtcatctttgtgcgacattgtttgtctttcttgtttcgttcaggcatttgtttggt-cagattg 2629109  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  2629110 tcagatcagcttcgatccagtgcagatcaaatcaatgactttgg 2629153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 559
Target Start/End: Complemental strand, 12244231 - 12244084
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| ||| ||||||| ||||||||||  ||||||||| ||||||||||  || |||||||  | ||||||||| ||| |||||||||    
T  12244231 gtgatttcgtcatcttagtgcgacgttgttttgttcgtcaactttgtgcggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattg 12244132  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    ||| |||||||| |||||| |||||||||||||||||| |||| ||||    
T  12244131 tcatatcagctttgatccaatgcagatccaatcaatgactttgatgtc 12244084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 32256736 - 32256586
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| || |||| |||||| ||||||||||||||||||||||||| ||||||||||   |  |||||||| |||||| ||||||    
T  32256736 gtgatttcgccgtcttagtgcgatgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagattg 32256637  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    | | |||||||||||||  ||||||||| ||||||||| ||||| ||||||    
T  32256636 ttaaatcagcttcgatcatgtgcagatcaaatcaatgactttggagtcatc 32256586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 5917757 - 5917621
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| |||||||  ||||||||||||||||||||||||||||||| |||| | |||   | ||||||||| |||||||||||||    
T  5917757 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacgttgtttgtctttcctattttgttcaggtatttgttcggttcagattg 5917658  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||       ||||||||||||||||||||||||| |||||    
T  5917657 tcagat-------gatccagtgcagatccaatcaatgactttgg 5917621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 32061893 - 32062043
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||||| ||| |||| || |||||| |||||||||||||||| |||||||| |||||    || | | |||| |||| ||||||||||||    
T  32061893 gtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacattgtttgtcttttccctcttgt-tcaggtgtttgttcggttcagatt 32061991  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||| ||||||    
T  32061992 gtcagatcagcttcgatcaagtgcagatccaaccaatgactttggcgtcatc 32062043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 441 - 555
Target Start/End: Original strand, 23766867 - 23766982
Alignment:
Q  441 tttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatc 539  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||  | | ||||||| ||| ||||||||||||||||||||||||||||||| ||||     
T  23766867 tttgttcgtcgtctttgtgcgacgttgtttgtatttttttggttcattcatgtatttgttcgattcagattgtcagatcagcttcgatccagtgtagatt 23766966  T
Q  540 caatcaatgattttgg 555  Q
     ||||||||| |||||    
T  23766967 aaatcaatgactttgg 23766982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 539
Target Start/End: Original strand, 14327578 - 14327705
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||||| |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| |||||   ||| | | | || |||| ||||||||||||    
T  14327578 gtgatttagtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttttgt-tcaagtgtttgttcggttcagatt 14327676  T
Q  511 gtcagatcagcttcgatccagtgcagatc 539  Q
    ||||||||||||||||| |||||||||||    
T  14327677 gtcagatcagcttcgatacagtgcagatc 14327705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 1215354 - 1215213
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||| | ||| |  ||  ||  ||||  ||| ||| |||||||||    
T  1215354 gtgatttcgtcgtcttagtgtgacgttgttttgtttgtcatctttgtgcgacgttgtttatctttttccttgttc--aggtggttgttcgattcagattg 1215257  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||| |||||||| |||| ||||||||||||| |||||| |||||    
T  1215256 tcaaatcagctttgatctagtgcagatccaaccaatgactttgg 1215213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 416 - 562
Target Start/End: Complemental strand, 27534423 - 27534277
Alignment:
Q  416 tttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagattgtca 514  Q
    |||||||||||| ||| ||| ||| |||||| |||||||||||||| |||||||||| |||||    || | |||||| |||| || | |||||||||||    
T  27534423 tttcgtcgtcttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtttgtgttttccctcttgt-ttaggtgtttgttcagatcagattgtca 27534325  T
Q  515 gatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| |||||||||||||||||||||||| |||||| || || ||||||    
T  27534324 gattagcttcgatccagtgcagatccaaccaatgacttaggcgtcatc 27534277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 7281142 - 7281001
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||| | ||| ||| |||||||||||||||||||||||| || |||||||| ||  |||||||    ||||||||| |||||| ||||||    
T  7281142 gtgatttcgccgtcatagtgcgacattggtttgttcgtcgtctttgtgcaacattgtttgtcttatttgtttcatgcaggtatttgttcggtttagattg 7281043  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||| ||| ||||||| ||||||||||| ||||| |||| ||||    
T  7281042 tcatatccgcttcga-ccagtgcagattcaatctatgactttg 7281001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 420 - 559
Target Start/End: Original strand, 13864466 - 13864605
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||| ||| ||| ||||||| ||||||| |  ||||| |||| |||||||||| ||||||||||     ||||||||  || ||||||||||||||||||    
T  13864466 gtcgccttagtgcgacgttgttttgttctttatctttctgcggcgttgtttgtctttcttgttttatgcaggtatttcttcagttcagattgtcagatca 13864565  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    |||||||| ||||||| || ||||| |||| |||||||||    
T  13864566 gcttcgatacagtgcatattcaatccatgactttggtgtc 13864605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 526
Target Start/End: Complemental strand, 7269479 - 7269365
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||| | ||| |||||||||||||| ||||||||||||| || |||||||| |||||||||||    | ||||||| |||||| ||||||    
T  7269479 gtgattttgtcgtcatagtgcgacgttggtttgttagtcgtctttgtgcaacattgtttgtctttcttgtttcatgcaagtatttgttcggtttagattg 7269380  T
Q  512 tcagatcagcttcga 526  Q
    ||| ||| |||||||    
T  7269379 tcatatctgcttcga 7269365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 11298754 - 11298626
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccag 531  Q
    ||||||| |||||| |||||||||||||| |||||||||| |||||    || | | |||| |||| |||| |||||||||||||| ||||| |||||||    
T  11298754 gacgttgttttgtttgtcgtctttgtgcggcgttgtttgtcttttccctcttgt-tcaggtgtttgttcggatcagattgtcagattagctttgatccag 11298656  T
Q  532 tgcagatccaatcaatgattttggtgtcat 561  Q
    ||||||||||| |||||| ||||| |||||    
T  11298655 tgcagatccaaccaatgactttggcgtcat 11298626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 13977556 - 13977641
Alignment:
Q  461 gacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaa 546  Q
    |||||||||||| |||||||||||  | |||||||||| ||||||||||| |||||||| ||||||| ||||||| || |||||||    
T  13977556 gacgttgtttgtctttcttgtttcgttcaggtatttgaccggttcagattatcagatcaacttcgattcagtgcaaattcaatcaa 13977641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 520
Target Start/End: Original strand, 3681022 - 3681130
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||||| || ||| ||| ||| ||| |||||||||||  ||||||||||||||| |||||||||||| |  |||||||| |||||| ||||||    
T  3681022 gtgattttgtcgttttagtgcgacattgatttattcgtcgtcttcatgcgacgttgtttgtctttcttgtttctttctggtatttgttcggtttagattg 3681121  T
Q  512 tcagatcag 520  Q
    ||| |||||    
T  3681122 tcatatcag 3681130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 18190859 - 18190711
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt---cttgtttctcttaggtatttgatcggttcaga 508  Q
    |||||||||||||||| ||| |||  || |||||| || |||||||||||||||||||||| |||   |||||     | |  | |||| | | ||||||    
T  18190859 gtgatttcgtcgtcttagtgcgaccctgttttgtttgttgtctttgtgcgacgttgtttgtcttttcccttgt-----tcaaatgtttgtttgattcaga 18190765  T
Q  509 ttgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  18190764 ttgtcaaatcagcttcgatccagtgcagatccaaccaatgactttggcgtcatc 18190711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 26582903 - 26582792
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||| ||||| ||| || |||||||| ||||||| ||||||||   |||||||| ||||||||||||  |  | |||||| ||| |||||||||    
T  26582903 gtgatttcgttgtcttagtgcgatgttggtttattcgtcgactttgtgcattgttgtttg-ttttcttgtttcgttcggatatttgttcgattcagattg 26582805  T
Q  512 tcagatcagcttc 524  Q
    |||||||||||||    
T  26582804 tcagatcagcttc 26582792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 16808983 - 16809046
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||  ||| |||||||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  16808983 gtcgtctaagtgggacgttgggttgttcgtggtctttgtgcggcgttgtttgtctttcttgttt 16809046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 559
Target Start/End: Complemental strand, 16938285 - 16938145
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    ||||||||||||||| ||| ||| ||| | |||||||||| |||||||  |||||||||| ||| || |||   |  |||||||| ||||||||| |||     
T  16938285 tgatttcgtcgtcttagtgcgactttgttgtgttcgtcgtatttgtgctgcgttgtttgtcttttttatttagttcgggtatttgttcggttcaggttgc 16938186  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    |||||||||||      ||||||||| |||||||||| ||| |||||    
T  16938185 cagatcagctt------agtgcagattcaatcaatgacttttgtgtc 16938145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 18890832 - 18890774
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| |||||||||||||||||    
T  18890832 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcgacgttgtttg 18890774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 6833579 - 6833648
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgt 481  Q
    ||||||| || ||||| ||| || ||||||||  |||||||||||||||||| |||||||| ||||||||    
T  6833579 gtgattttgttgtcttagtgcgatgttggtttactcgtcgtctttgtgcgacattgtttgtctttcttgt 6833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 555
Target Start/End: Original strand, 37719993 - 37720082
Alignment:
Q  466 tgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||| |||||||||||  |  |||||||| |||||| ||| | ||||| || ||||||||||||||||||| |||||| || |||||    
T  37719993 tgtttgtctttcttgtttcgttcgggtatttgttcggtttagaatatcagaccaacttcgatccagtgcagatctaatcaaagactttgg 37720082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 15827109 - 15827169
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 472  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||  ||||||| ||||||||||    
T  15827109 gtgatttcgtcgtcttagtgcgacgttgttttgttcgttgtacttgtgcgtcgttgtttgt 15827169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 555
Target Start/End: Original strand, 18994075 - 18994131
Alignment:
Q  499 tcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||||||||||| ||||  ||| |||| |||| |||||||||||    
T  18994075 tcggttcagattgtcagatcagctttgatctggtgaagattcaataaatgattttgg 18994131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 32920751 - 32920815
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt 476  Q
    |||||||||||||||| |||  ||  || |||||| |||||||||||||||| ||||||||||||    
T  32920751 gtgatttcgtcgtcttagtgcaacaatgttttgtttgtcgtctttgtgcgaccttgtttgttttt 32920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 310
Target Start/End: Original strand, 2628877 - 2628916
Alignment:
Q  271 ttctcttttccccttctcttttgtgagccgtcaccaaaat 310  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  2628877 ttctctcttccccgtctcttttgtgagccgtcaccaaaat 2628916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 554
Target Start/End: Complemental strand, 31147811 - 31147701
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtca---gatcagcttcgatccagtgcagatcca 541  Q
    ||||||||||| |||||| |||| || |||||  ||||||  | ||||||||| ||||||||| ||||||   ||||| |||  ||||| ||||||||||    
T  31147811 ttcgtcgtcttagtgcgaggttggttcttttt--tgtttcattcaggtatttgttcggttcagtttgtcatgtgatcaactttaatccaatgcagatcca 31147714  T
Q  542 atcaatgattttg 554  Q
    |||||||| ||||    
T  31147713 atcaatgactttg 31147701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 39657410 - 39657468
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||| |||||||||    
T  39657410 gtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtc-ttgtgcggcgttgtttg 39657468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 483
Target Start/End: Complemental strand, 284491 - 284422
Alignment:
Q  414 gatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||||||||| ||   ||||| ||||||| || |||| |||||| |||||||||| ||||||||||    
T  284491 gatttcgtcgtcttagtacaacgttagtttgtttgttgtctgtgtgcggcgttgtttgtctttcttgttt 284422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 631386 - 631455
Alignment:
Q  414 gatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||||||||| ||   ||||| ||||||| || |||| |||||| |||||||||| ||||||||||    
T  631386 gatttcgtcgtcttagtacaacgttagtttgtttgttgtctgtgtgcggcgttgtttgtctttcttgttt 631455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 817198 - 817267
Alignment:
Q  414 gatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||||||||| ||   ||||| ||||||| || |||| |||||| |||||||||| ||||||||||    
T  817198 gatttcgtcgtcttagtacaacgttagtttgtttgttgtctgtgtgcggcgttgtttgtctttcttgttt 817267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 12356919 - 12356976
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    ||||||||||||||| |||||||  || |||||| |||||||||| ||| ||||||||    
T  12356919 tgatttcgtcgtcttagtgtgacactgttttgtttgtcgtctttgagcggcgttgttt 12356976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 15237827 - 15237790
Alignment:
Q  272 tctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15237827 tctcttttccctttctcttttgtgagtcgtcaccaaaa 15237790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 12244401 - 12244357
Alignment:
Q  281 cccttctcttttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    ||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  12244401 cccttctctcttgtgagccgtcatcaaaatcttagtttcttctcc 12244357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 14115987 - 14115951
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcacc 305  Q
    |||||||||||||| |||||| |||||||||||||||    
T  14115987 ttttctcttttccctttctctcttgtgagccgtcacc 14115951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 555
Target Start/End: Complemental strand, 14919313 - 14919261
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||| ||| ||||||||||| || |||| ||||| |||||    
T  14919313 ttcagattgtcagatcaactttgatccagtgcaaattcaattaatgactttgg 14919261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 131; Significance: 1e-67; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 12218 - 12064
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12218 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 12119  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||  |||||||||||||||||||| ||||| ||||||||||    
T  12118 tcagatcagcttcgatttagtgcagatccaatcaatgactttggcgtcatccacg 12064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 1e-67; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 22344927 - 22344773
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  22344927 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattg 22344828  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  22344827 tcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacg 22344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 414 - 566
Target Start/End: Original strand, 21326574 - 21326726
Alignment:
Q  414 gatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtc 513  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  21326574 gatttcgtcgtcttcgtgtgacattggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttttctcaggtatttgatcggttcagattgtc 21326673  T
Q  514 agatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  21326674 agatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 21326726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 412 - 549
Target Start/End: Original strand, 23320539 - 23320676
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||||||    
T  23320539 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttgatcggttcagattg 23320638  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23320639 tcagatcagcttcgatccagtgcagatccaatcaatga 23320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 12967747 - 12967593
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||| |||| || ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  12967747 gtgattccgtcatcatcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 12967648  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  12967647 tcagatcagcttcgatccagtgcatatccaatcaatgactttggtgtcatccacg 12967593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 44562764 - 44562614
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||    
T  44562764 gtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgataggttcagattg 44562665  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  44562664 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatc 44562614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 412 - 565
Target Start/End: Original strand, 4564616 - 4564768
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  4564616 gtgatttcgtcgtcttcgtgcgacgttggtt-gttagtcgtctttgtgcgacgttgtttgtttttcttatttctctcaggtatttgatcgcttcagattg 4564714  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccac 565  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  4564715 tcagatcagcttcgatccagtgcagattcaatcaatgactttggtgtcatccac 4564768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 5832333 - 5832487
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  5832333 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 5832432  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||  ||||||||||    
T  5832433 tcagaccagcttcgatccagtgcagatctaatcaatgactttgacgtcatccacg 5832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 23257187 - 23257341
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  23257187 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgattggtccagattg 23257286  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||  || |||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  23257287 tctaattagcttcgatccactgcagatccaatcaatgactttggcgtcatccacg 23257341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 15276465 - 15276307
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt----cttgtttctcttaggtatttgatcggttcag 507  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||||    ||||||||||| |||||||||||||||||||    
T  15276465 gtgatttcgtcgttttcgtgcgacgttggtttgttcgtcgtctttgtgcgatgttgttttttttttcttcttgtttctctcaggtatttgatcggttcag 15276366  T
Q  508 attgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  15276365 attgtgagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 15276307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 38644812 - 38644658
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||    
T  38644812 gtgatttcttcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgattggctcagattg 38644713  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| ||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  38644712 tcagatcagtttcgatccagtgcagattcaatccatgattgtggagtcatccacg 38644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 38646683 - 38646837
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||||||    
T  38646683 gtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttaaccggttcagattg 38646782  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
     |||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||||    
T  38646783 ccagatcagcttcgatctagtgtagatcaaatcaatgactttggcgtcatccacg 38646837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 630799 - 630645
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||||  ||||||    
T  630799 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacgttgttcgtctttcttgtttctctcaagtatttgatcggtcaagattg 630700  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||  ||||||||||    
T  630699 tcagaccagcttcgatccagtgcagatctaatcaatgactttgacgtcatccacg 630645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 28213147 - 28213301
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| | |||| |||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||| |||||||||||||    
T  28213147 gtgattttgtcgtctttgtgcggcgttagtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttcagattg 28213246  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  28213247 tcagatcagattcgatccagtgtagatccaatcaatgactttggtgtcatccacg 28213301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 445 - 554
Target Start/End: Original strand, 45659146 - 45659255
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45659146 ttcgtcgtctttgtgcgacgttggttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 45659245  T
Q  545 aatgattttg 554  Q
    ||||| ||||    
T  45659246 aatgactttg 45659255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 15698299 - 15698451
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||||  |||||||||| ||||||||||| |||||||||||    
T  15698299 gtgatttcgtcgtctttgtgtgacgttggtt-gttcatcgtctttgggcgacgttgtttgttttg-ttgtttctctcaggtatttgattggttcagattg 15698396  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||| |||||||| |||||||||| ||||| ||||||||||    
T  15698397 tcagatcagcttcgatccggtgcagattcaatcaatgactttggcgtcatccacg 15698451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 445 - 566
Target Start/End: Complemental strand, 14717252 - 14717131
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14717252 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcagattcgatccagtgcagatccaatc 14717153  T
Q  545 aatgattttggtgtcatccacg 566  Q
    |||||  |||| ||||||||||    
T  14717152 aatgacattggcgtcatccacg 14717131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 36621451 - 36621605
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| | |||||||||||| |||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||    
T  36621451 gtgattttgtcgtcttcgtgcggcgttggtttgtttgtcgtctttgtgcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagattg 36621550  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||| ||| ||||||||||| ||||||||||||| |||||  |||||||||    
T  36621551 tcacatcaactttgatccagtgcaaatccaatcaatgactttggcatcatccacg 36621605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 566
Target Start/End: Complemental strand, 6212896 - 6212775
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||    
T  6212896 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgattcatgttgtcagatcagcttcgatcaagtgcagatccaatc 6212797  T
Q  545 aatgattttggtgtcatccacg 566  Q
    ||||| ||||| ||||||||||    
T  6212796 aatgactttggcgtcatccacg 6212775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 52839629 - 52839772
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||||||| |||||||||| |||||||| |||||||||||| |||||||||||  | ||||||||| || | ||||||||    
T  52839629 gtgattttgtcgtcttagtgcgacgttgttttgttcgtcatctttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagattg 52839728  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  52839729 tcagatcagcttcgatccagtgcagatcaaatcaatgactttgg 52839772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 412 - 548
Target Start/End: Complemental strand, 27469723 - 27469587
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||||  | ||||| ||| ||  || ||||||    
T  27469723 gtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtaattgttcaatttagattg 27469624  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    |||||||||||||||||||||||||||| ||||||||    
T  27469623 tcagatcagcttcgatccagtgcagatcaaatcaatg 27469587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 11121075 - 11121218
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| || ||||  ||||||||| ||||||||| ||||||||||| ||||||||||   | | ||||||| |||||||||||||    
T  11121075 gtgatttcgtcgtcttagtgcgaggttgtgttgttcgtcatctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattg 11121174  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  11121175 tcagatcagcttcgatccagtgcagatcaaatcaatgactttgg 11121218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 49651943 - 49652084
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||              
T  49651943 gtgatttcgtcgtcttcgtgtgacgttcgtttgttcgtcgtctttgtacgacgttgtttgtctttcttgtttctctcaagtaattgatcg---------t 49652033  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||| ||||||    
T  49652034 tcagatcagcttcgatccaatgcaaatccaatcaatgactttggcgtcatc 49652084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 413 - 554
Target Start/End: Original strand, 26199680 - 26199821
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    ||||||| ||||||| ||| ||| ||| |||||||||||||||||||||||||||||| | |||||||||||  | ||||||||| ||| ||||| ||||    
T  26199680 tgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgttcgattcaggttgt 26199779  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||||||||||| || ||| ||||||||| ||||    
T  26199780 cagatcagcttcgatccagtacaaatcaaatcaatgactttg 26199821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 454 - 555
Target Start/End: Complemental strand, 44513975 - 44513874
Alignment:
Q  454 tttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgatttt 553  Q
    ||||||||||||||||||| |||||||||||  | ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  44513975 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgacttt 44513876  T
Q  554 gg 555  Q
    ||    
T  44513875 gg 44513874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 32539205 - 32539061
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttg-atcggttcagatt 510  Q
    ||||||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||     | |||||||  | ||||||||||    
T  32539205 gtgattttgtcgtcttagtacgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttattgttttgtccatgtatttgttttggttcagatt 32539106  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||| |||||||| ||||||| ||||||||||||| |||||    
T  32539105 gtcagatctgcttcgattcagtgcaaatccaatcaatgactttgg 32539061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 559
Target Start/End: Complemental strand, 33177612 - 33177466
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| | ||||| ||| |||||||  ||||||| ||||||||||| ||||||||||| ||| ||||||   | | ||||||| |||||||||||||    
T  33177612 gtgatttcattgtcttagtgcgacgttgtgttgttcgccgtctttgtgcaacgttgtttgtgttt-ttgttttgttcatgtatttgttcggttcagattg 33177514  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtc 559  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  33177513 tcagatcaacttagatccagtgcagatccaatcaatgactttggtgtc 33177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 33703525 - 33703382
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||  | ||||| |||||| ||||||||||||||||||||||||| |||||||||||  | | ||||||| | | |||||||||    
T  33703525 gtgatttcgtcgtcttagtacggcgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcacgtatttgtttgattcagattg 33703426  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||| || ||||||||| ||||| ||||||||| |||||    
T  33703425 tcagatcaggtttgatccagtgtagatcaaatcaatgactttgg 33703382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 433 - 547
Target Start/End: Original strand, 10264829 - 10264943
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagt 532  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||  | ||||||||| ||| ||||||||||||||||| ||||||  || |    
T  10264829 gacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatcaacttcgagtcatt 10264928  T
Q  533 gcagatccaatcaat 547  Q
    ||| |||||||||||    
T  10264929 gcaaatccaatcaat 10264943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 48655035 - 48654907
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagt 532  Q
    |||||||||||||||||||||||||| | ||||||||||| ||| |||||||  | | ||||||| |  ||||||||||||| || ||||||||| ||||    
T  48655035 gacgttggtttgttcgtcgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgtttagttcagattgtcatattagcttcgattcagt 48654936  T
Q  533 gcagatccaatcaatgattttggtgtcat 561  Q
    ||||||||||||||||| ||||| |||||    
T  48654935 gcagatccaatcaatgactttggcgtcat 48654907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 10877445 - 10877588
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||| ||| ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||  ||| ||||| | |||||||| ||||    
T  10877445 gtgatttcgtcatcttagtgcgacgttgttttgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcatttatgtattggttcggttcatattg 10877544  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||| ||||  ||| ||||||||||||| |||||||||| |||||    
T  10877545 tcatatcattttcaatccagtgcagattcaatcaatgactttgg 10877588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 8893392 - 8893534
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| ||  ||| |||  ||| |||||||||||||| | |||||||||| ||||||||||   | ||||||||| ||||||||||||     
T  8893392 gtgatttcatcgtcttagtacgacattgtgttgctcgtcgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattt 8893491  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  8893492 tcagatcagcttagatccagtgcaaatccaatcaatgactttg 8893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 538
Target Start/End: Complemental strand, 12148063 - 12147937
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||| ||||||||| ||||||| ||| ||||||||| || ||||||| || |||||||| |||||||||||  | ||||||||| ||| |||||||||    
T  12148063 gtgattccgtcgtcttagtgtgactttgttttgttcgttgtttttgtgcaacattgtttgtctttcttgtttcgttcaggtatttgttcgattcagattg 12147964  T
Q  512 tcagatcagcttcgatccagtgcagat 538  Q
    |||||||| |||||||| |||||||||    
T  12147963 tcagatcaacttcgatctagtgcagat 12147937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 1768065 - 1768135
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  1768065 gtgatttcgtcgtcttcgtgtgacgttggtt-gttcgtcgtctttgtgcgacattgtttgtttttcttgttt 1768135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 431 - 566
Target Start/End: Original strand, 47392256 - 47392389
Alignment:
Q  431 gtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatcca 530  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||  | || |||||| |||||| || || |||||||||||| ||||||    
T  47392256 gtgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtcttt-ttgtttcgttcagatatttgttcggtttaggttttcagatcagctt-gatcca 47392353  T
Q  531 gtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| ||||||||| ||||| ||||| ||| ||||||    
T  47392354 gtgtagatccaataaatgactttggcgtcgtccacg 47392389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 555
Target Start/End: Complemental strand, 22032095 - 22031963
Alignment:
Q  423 gtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagct 522  Q
    ||||| ||| || ||||||||||||||||||||| || | |||||||||  |||||||||||  |  |||||||| || ||||| ||||||||| ||| |    
T  22032095 gtcttagtgcgatgttggtttgttcgtcgtctttatgtggcgttgtttgcctttcttgtttcgttccggtatttgttcagttcatattgtcagaccagtt 22031996  T
Q  523 tcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||| ||||||||||||||| |||||    
T  22031995 tcgatccagtgtagatccaatcaatgactttgg 22031963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 548
Target Start/End: Original strand, 29067148 - 29067284
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| || |||| ||| ||||||| ||||||||||||||||||||  |||||||||| ||||||||||   | | ||||||  |||||||| |||     
T  29067148 gtgatttcatcttcttagtgcgacgttgttttgttcgtcgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaattt 29067247  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    ||||||||||||||||| |||||| || |||||||||    
T  29067248 tcagatcagcttcgatcaagtgcaaattcaatcaatg 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 2350721 - 2350871
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||||| |||||||| ||| ||||||| |||||| ||||||| ||||||||||||||||| |||||   ||| | | |||| |||| ||||||| ||||    
T  2350721 gtgatttagtcgtcttagtgcgacgttgttttgttggtcgtctctgtgcgacgttgtttgtcttttcccttttgt-tcaggtgtttgttcggttcggatt 2350819  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||| |||||| |||||||||| |||||| |||||| ||||| ||||||    
T  2350820 gtcagattagcttcaatccagtgcaaatccaaccaatgactttggcgtcatc 2350871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 412 - 561
Target Start/End: Original strand, 34566787 - 34566934
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttt--cttgtttctcttaggtatttgatcggttcagat 509  Q
    |||||||||||||||| ||| |||  || |||||| ||||||||||||||||||||||||| |||  | || |||    | || |||| ||| |||||||    
T  34566787 gtgatttcgtcgtcttagtgcgaccctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttccctggttc----aagtgtttgttcgattcagat 34566882  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcat 561  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||| |||||    
T  34566883 tgtcagatcagtttcgatccagtgcagatccaaccaatgactttggcgtcat 34566934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 37685105 - 37684962
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| | | |||| ||  ||  |||||||||||||  |||||||||||| |||||||||||  | |  |||||| | | |||||||||    
T  37685105 gtgatttcgtcgtcttagcgcgacggtgtcttaatcgtcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattg 37685006  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||  ||| ||||| |||||    
T  37685005 tcagatcagcttcgatccagtgcagattaaattaatgactttgg 37684962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 37700412 - 37700555
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| | | |||| ||  ||  |||||||||||||  |||||||||||| |||||||||||  | |  |||||| | | |||||||||    
T  37700412 gtgatttcgtcgtcttagcgcgacggtgtcttaatcgtcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattg 37700511  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||  ||| ||||| |||||    
T  37700512 tcagatcagcttcgatccagtgcagattaaattaatgactttgg 37700555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 46589279 - 46589369
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 535  Q
    ||||||||||||||||| || ||||||| ||||||||||| || | ||||||| |||||||||||||||||||||| ||| || |||||||    
T  46589279 ttcgtcgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgttcggttcagattgtcagatcagtttcaattcagtgca 46589369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 475
Target Start/End: Original strand, 52752122 - 52752185
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttt 475  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  52752122 gtgattttgtcgtcttcgtacgacattggtttgttcgtcgtctttgtgcgacgttgtttgtttt 52752185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 554
Target Start/End: Complemental strand, 13969657 - 13969513
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtt---tttcttgtttctcttaggtatttgatcggttcagat 509  Q
    ||||||| ||||||| ||| |||||||   ||||||||||||||||||| | || ||| ||   ||| ||||||   | | ||||||| |||||||| ||    
T  13969657 tgatttcatcgtcttagtgcgacgttgtgatgttcgtcgtctttgtgcggcattattttttgtctttattgttttgttcaagtatttgttcggttcaaat 13969558  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||    
T  13969557 tgtcaaatcagcttagatccagtgcagatccaatcaatgactttg 13969513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 566
Target Start/End: Original strand, 900226 - 900346
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    |||||||||||||||| || |||||||| ||| |||||||    || ||| || |||||||||||||||| |||| ||| |||||||||| |||||||||    
T  900226 ttcgtcgtctttgtgcaac-ttgtttgtcttttttgtttcgtccagatatctgttcggttcagattgtcatatcaactttgatccagtgcggatccaatc 900324  T
Q  545 aatgattttggtgtcatccacg 566  Q
    ||||| ||||  ||||||||||    
T  900325 aatgactttgacgtcatccacg 900346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 40488412 - 40488341
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||| | ||| ||||||||||    
T  40488412 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttatctgtctttcttgttt 40488341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 445 - 504
Target Start/End: Original strand, 40992440 - 40992499
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggtt 504  Q
    |||||| |||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  40992440 ttcgtcatcttcgtgcgacgttgtttgtgtttcttgtttctctcaggtatttgatcggtt 40992499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 34659574 - 34659513
Alignment:
Q  494 tttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||| |||||||||||||||| |||||||| |||||| |||||||||||||||||| |||||    
T  34659574 tttgttcggttcagattgtcatatcagcttagatccaatgcagatccaatcaatgactttgg 34659513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 506 - 560
Target Start/End: Original strand, 37662403 - 37662457
Alignment:
Q  506 agattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtca 560  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  37662403 agattgttagatcagcttcgatctagtgcagatccaaccaatgactttggtgtca 37662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 14717437 - 14717381
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    |||||||||||||| |||||| ||||||||||||||||||| | |||||| ||||||    
T  14717437 ttttctcttttccctttctctcttgtgagccgtcaccaaaactctagtttcttctcc 14717381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 30853801 - 30853744
Alignment:
Q  415 atttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 472  Q
    ||||||||| ||| ||| ||||||||||||||| |||| |||||||| ||||||||||    
T  30853801 atttcgtcgccttagtgcgacgttggtttgttcatcgtgtttgtgcggcgttgtttgt 30853744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 562
Target Start/End: Complemental strand, 27356678 - 27356618
Alignment:
Q  502 gttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||||| |||||||||||| |||| || ||| || |||||| ||||||||||||    
T  27356678 gttcagattgtcaaatcagcttcgatacagtacatatcaaaccaatgactttggtgtcatc 27356618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 15276628 - 15276570
Alignment:
Q  269 ttttctcttttccccttctct--tttgtgagccgtcaccaaaattttagtttattctcc 325  Q
    |||||||||||||| ||||||  ||||||||||||||||||||   |||||||||||||    
T  15276628 ttttctcttttccctttctctcttttgtgagccgtcaccaaaaccatagtttattctcc 15276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 16161795 - 16161853
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 471  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||| |||||||||    
T  16161795 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcggcgttgtttg 16161853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 40992287 - 40992325
Alignment:
Q  271 ttctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  40992287 ttctcttttccctttctctcttgtgagccgtcaccaaaa 40992325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 8224355 - 8224416
Alignment:
Q  494 tttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||| ||||||||||||||| |||||| |||||||| ||||| ||| ||| ||||| |||||    
T  8224355 tttgttcggttcagattgtctgatcagattcgatcccgtgcatatctaattaatgactttgg 8224416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 8893243 - 8893276
Alignment:
Q  285 tctcttttgtgagccgtcaccaaaattttagttt 318  Q
    |||||| |||||||||||||||||||||||||||    
T  8893243 tctcttgtgtgagccgtcaccaaaattttagttt 8893276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 530 - 562
Target Start/End: Original strand, 8737567 - 8737599
Alignment:
Q  530 agtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||||||| ||||||||||||||    
T  8737567 agtgcagatccaatcaataattttggtgtcatc 8737599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 127; Significance: 3e-65; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 5541 - 5387
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  5541 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcatattg 5442  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  5441 tcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 5387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 127; Significance: 3e-65; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 244735 - 244889
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  244735 gtgattttgtcgtcttcgtgcgaccttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgaccggttcagattg 244834  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  244835 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 244889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 3e-65; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 29310369 - 29310215
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||     
T  29310369 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcaaatta 29310270  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  29310269 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 29310215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 31645928 - 31646082
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  31645928 gtgatttcttcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcagttcagattg 31646027  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  31646028 tcagatcaacttcgatccagtgcagatccaatcaatgactttggtgtcatccacg 31646082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 4726943 - 4726793
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  4726943 gtgatttcgtcgtcttcgtgcgatgttggttagttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattg 4726844  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  4726843 tcagatcagcttcaatccagtgcagatccaatcaatgactttggtgtcatc 4726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 6887193 - 6887039
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  6887193 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgcttctctcaggtatttgatcagttcagattg 6887094  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    | |||| ||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  6887093 ttagattagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 6887039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 4070651 - 4070804
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  4070651 gtgatttcgtcgtattcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgtttcagattg 4070749  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  4070750 tcagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacg 4070804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 28618702 - 28618855
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||||||    
T  28618702 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcatcgtctttgtgcgacgttatttgtttttcttgtttctctcaggtatttgatcgctttagattg 28618800  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28618801 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 28618855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 412 - 561
Target Start/End: Complemental strand, 9034957 - 9034808
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||    
T  9034957 gtgatttcatcgtcttcgtgcgacgttggtttgttcctcgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggttcagattg 9034858  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcat 561  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  9034857 tcagatcagtttcgatctagtgcagatccaatcaatgactttggggtcat 9034808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 10924148 - 10923995
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  10924148 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtt-gtttttcttgtttctctcagatatttgatcggttcaaattg 10924050  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    || ||||| |||| || |||||||||||||||||| || ||||| || |||||||    
T  10924049 tcggatcaacttcaatgcagtgcagatccaatcaacgactttggcgttatccacg 10923995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 35906401 - 35906521
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 544  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  35906401 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattatcggatcagcttcgatccagtgcagatccaatc 35906500  T
Q  545 aatgattttggtgtcatccac 565  Q
    ||||| ||||| |||||||||    
T  35906501 aatgactttggcgtcatccac 35906521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 20270813 - 20270956
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||  |||||||||||  | ||||||||| |||||||||||||    
T  20270813 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattg 20270912  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||    
T  20270913 tcagatcagcttcaatccagtgcagatcaaatcaatgactttgg 20270956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 41554586 - 41554729
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| ||| ||||||||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||    
T  41554586 gtgatttcgtcgtcttagtgcgaccttgttttattcgtcgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagattg 41554685  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  41554686 tcagatcagcttcgatccagtgcagatcaaatcaatgactttgg 41554729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 5378401 - 5378555
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||| |||| |||||||||||||| || | ||||||||||||||||||    
T  5378401 gtgatttcgtcgtcttcgtgcgaaattggtttgttcgtcgtctttgtgcgacattgcttgtctttcttgtttctctcagatgtttgatcggttcagattg 5378500  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    || |||||| ||||||||| |||||||| ||||||||| ||||| ||||||||||    
T  5378501 tcggatcagtttcgatccaatgcagatcaaatcaatgactttggcgtcatccacg 5378555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 41063411 - 41063269
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||  | |||||||||||||||||||     
T  41063411 gtgatttcgtcgtcttcgtatgacgttggtttgtttgtcggctttgagcgacgttgtttgtttttcttatttctctcggctatttgatcggttcagattc 41063312  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    | | |||||||||||||||||||||||||||| ||||| ||||    
T  41063311 ttatatcagcttcgatccagtgcagatccaattaatgactttg 41063269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 22397563 - 22397420
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||| |||||| ||||  | ||||||||| ||| |||||||||    
T  22397563 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagattg 22397464  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||    
T  22397463 tcagatcagcttcgatctagtgcagatcaaatcaatgactttgg 22397420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 33486584 - 33486441
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||||  | | ||||||| |||||||||||||    
T  33486584 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattg 33486485  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||| |||||||||||||||||||||||| || |||||| |||||    
T  33486484 tcaaatcagcttcgatccagtgcagatcaaaccaatgactttgg 33486441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 546
Target Start/End: Original strand, 2415499 - 2415633
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| ||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||| ||||| || | ||||||||| |||||||||||||    
T  2415499 gtgattttgtcgtcttcatgcgacgttggtttgttcgttgtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagattg 2415598  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaa 546  Q
    ||||||||||||||||||||||||||| |||||||    
T  2415599 tcagatcagcttcgatccagtgcagattcaatcaa 2415633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 18472740 - 18472599
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||| |||||||||||  | ||||||||| ||| |||||||||    
T  18472740 gtgatttcgtcgtcttagtgtgactttg-tttgttcctcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattg 18472642  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||    
T  18472641 tcagatcaacttcgatccagtgcagatcaaatcaatgactttg 18472599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 440 - 566
Target Start/End: Complemental strand, 19646028 - 19645902
Alignment:
Q  440 gtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatc 539  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||| | | ||||||| | | |||||||||||||||||| ||||||| ||||||||||    
T  19646028 gtttgtttgtcgtctttgtgtgacgttgtttgtctttcttgtttctttgaagtatttgttagattcagattgtcagatcagattcgatcaagtgcagatc 19645929  T
Q  540 caatcaatgattttggtgtcatccacg 566  Q
    |||||||||| ||||||||||||||||    
T  19645928 caatcaatgactttggtgtcatccacg 19645902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 40774859 - 40775003
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgt-ttgtttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    ||||||| |||||||| ||| ||||||| ||||| |||||||||||||| || |||| |||| |||||||||||  | ||||||||| ||||||||||||    
T  40774859 gtgattttgtcgtcttagtgcgacgttgttttgtccgtcgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagatt 40774958  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||    
T  40774959 gtcagatcagcttcgatccagtgtagatcaaatcaatgactttgg 40775003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 8812166 - 8812017
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||| |||||| ||| ||||||| ||||||||||||||||||| || ||||||||| ||||||||||   |  |||||||| |||||||||||||    
T  8812166 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtggga-gttgtttgtctttcttgttttgttcgggtatttgttcggttcagattg 8812068  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| | ||||||    
T  8812067 tcagatcagcttcggtccagtgcagatcaaatcaatgactttagagtcatc 8812017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 6647928 - 6647778
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| |||| ||   | ||||||||||||||||| |||||||||| ||||||||||   | || |||||| |||||||||||||    
T  6647928 gtgatttcgtcgtcttagtgcgacgatgtgctattcgtcgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagattg 6647829  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||| ||||||| |||| |||||||||||||||||||| || || ||||||    
T  6647828 tcaggtcagcttagatcaagtgcagatccaatcaatgacttcggcgtcatc 6647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 448 - 549
Target Start/End: Complemental strand, 34893923 - 34893822
Alignment:
Q  448 gtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaat 547  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| |||||||||| | ||||| ||||||||| || ||||||||    
T  34893923 gtcgtctttgtgcgacgttgtttgtttttcttgtttccctcagctatttgatcggttcatattgtcagattaacttcgttccagtgcaaattcaatcaat 34893824  T
Q  548 ga 549  Q
    ||    
T  34893823 ga 34893822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 413 - 548
Target Start/End: Original strand, 15710642 - 15710777
Alignment:
Q  413 tgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgt 512  Q
    |||||| ||| |||| ||| ||||||| || |||||| ||||||||| | |||||||||| |||||||||||  | ||||||||| |||||||  |||||    
T  15710642 tgattttgtcatcttagtgcgacgttgtttcgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgt 15710741  T
Q  513 cagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    ||||||||||| |||| |||||||||||||||||||    
T  15710742 cagatcagcttagatctagtgcagatccaatcaatg 15710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 34844015 - 34844158
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||| | ||| ||| ||| | |||| ||| ||||| | ||||||||||||| ||| |||||||  | ||||||||| ||| |||||||||    
T  34844015 gtgattttgtcgtcctagtgcgactttgttatgtttgtcatctttatacgacgttgtttgtcttttttgtttcgttcaggtatttgctcgattcagattg 34844114  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  34844115 tcagatcagcttcgatccagtgcagatcaaatcaatgactttgg 34844158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 553
Target Start/End: Original strand, 41988251 - 41988392
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||||||| |||||| |||||||||||||| | |||||||| ||| |||||||  ||| ||||||| | | ||||| |||    
T  41988251 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcggctttgtttgtcttttttgtttcgtttaagtatttgtttgtttcaggttg 41988350  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgatttt 553  Q
    ||| ||||||||| || |||||||||| ||||||||||||||    
T  41988351 tcatatcagcttcaatgcagtgcagattcaatcaatgatttt 41988392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 449 - 564
Target Start/End: Original strand, 29154356 - 29154471
Alignment:
Q  449 tcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    |||||||||||||| |||| |||| |||||| ||||  ||||| ||||| |||||| ||||||||| ||  |||||||| ||||||||||||||| ||||    
T  29154356 tcgtctttgtgcgatgttggttgtctttcttttttcgtttaggcatttgttcggtttagattgtcaaataggcttcgattcagtgcagatccaattaatg 29154455  T
Q  549 attttggtgtcatcca 564  Q
    ||||||||||||||||    
T  29154456 attttggtgtcatcca 29154471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 13007791 - 13007940
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| |||  |||||| ||| |||||||||||||||||||||||||||| ||||||| ||| || ||||||||| |||| ||| |||     
T  13007791 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcgacgttgtttgtctttcttg-ttcgctcaggtatttgttcggatcaaatta 13007889  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| ||||||||  |||||| ||| ||||||||| ||| ||| | ||||||    
T  13007890 tcatatcagcttaaatccagggcatatccaatcattgacttttgcgtcatc 13007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 412 - 518
Target Start/End: Original strand, 41358138 - 41358244
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||| ||| |||||||||||| |||||||| |||||||||| ||||||||||   ||||||||||| |||||||||||||    
T  41358138 gtgattttgtcgtcttagtgcgacattgttttgttcgtcgtgtttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagattg 41358237  T
Q  512 tcagatc 518  Q
    |||||||    
T  41358238 tcagatc 41358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 554
Target Start/End: Original strand, 32387588 - 32387705
Alignment:
Q  436 gttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgca 535  Q
    |||| ||||||  ||||||||||||| |||||||||  ||||||||||   | ||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  32387588 gttgatttgtttatcgtctttgtgcggcgttgtttgcctttcttgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 32387686  T
Q  536 gatccaatcaatgattttg 554  Q
    |||||||||||||||||||    
T  32387687 gatccaatcaatgattttg 32387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 32390662 - 32390520
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| | || ||| |||||||||| ||| || ||||||||||| |||||||||| |||||||||||  |  |||||||| |||||||| |||     
T  32390662 gtgatttcgtcatattagtgcgacgttggttcgtttgttgtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttcaaatta 32390563  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||| |||||| ||| |||| ||||| ||| ||||||||||    
T  32390562 tcagattagcttcaatctagtgtagatctaattaatgattttg 32390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 6074751 - 6074601
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagatt 510  Q
    |||||||||||||||| |||  ||  || |||||| |||||||||||||||| |||||||| |||||    || | | | || |||| ||||||||||||    
T  6074751 gtgatttcgtcgtcttagtgcaacactgttttgtttgtcgtctttgtgcgaccttgtttgtcttttccctcttgt-tcaagtgtttgttcggttcagatt 6074653  T
Q  511 gtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  6074652 gtcagatcaacttcgatccagtgtagatccaatcaatgactttggcgtcatc 6074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 34873960 - 34874103
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||||||||  || || |||| ||| |||||| |||||||| | |||||||||| |||||||||||| | || |||||   || |||| ||||    
T  34873960 gtgatttcgtcgtcttaatgcgatgttgttttattcgtcatctttgtgtggcgttgtttgtctttcttgtttctttcagatatttatccgattcaaattg 34874059  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||| |||| |||||||| |||||||||||||| ||||| |||||    
T  34874060 tcatatcaacttcgatctagtgcagatccaatgaatgactttgg 34874103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 13079244 - 13079393
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| |||  |||||| ||| ||||||||||||||||||| |||||||| ||||||| |||  | ||||||||| |||| ||| |||     
T  13079244 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcgacattgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaatta 13079342  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||| ||||||||  |||||| ||| ||||||||| ||| ||| | ||||||    
T  13079343 tcatatcagcttaaatccagggcatatccaatcattgacttttgcgtcatc 13079393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 412 - 541
Target Start/End: Original strand, 34866526 - 34866655
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| ||||||  |||||||||||||||||| || ||| |||| | |||||| ||||  | || |||||| ||| |||| ||||    
T  34866526 gtgatttcgtcgtcttagtgcgacgttattttgttcgtcgtctttgtacggcgtagtttatctttcttttttcattcagatatttgttcgattcaaattg 34866625  T
Q  512 tcagatcagcttcgatccagtgcagatcca 541  Q
    ||| || |||||||||| ||||||||||||    
T  34866626 tcatataagcttcgatctagtgcagatcca 34866655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 433 - 564
Target Start/End: Complemental strand, 28389103 - 28388971
Alignment:
Q  433 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggt-atttgatcggttcagattgtcagatcagcttcgatccag 531  Q
    ||||||||||| || |||||||||  ||| ||||||||||  || |||||||| | | || ||||| || ||||||||||||| |||||||| |||||||    
T  28389103 gacgttggtttatttgtcgtctttacgcggcgttgtttgtcatttttgtttctttcaagtcatttgttcagttcagattgtcatatcagcttagatccag 28389004  T
Q  532 tgcagatccaatcaatgattttggtgtcatcca 564  Q
    || ||||| ||||||||| ||||||||| ||||    
T  28389003 tgaagatcaaatcaatgactttggtgtcgtcca 28388971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 561
Target Start/End: Complemental strand, 20146231 - 20146085
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| |||||||| ||| ||||||| |||||| ||||||||||| || |||||||||| ||||   | |   | |||| |||| ||||||   ||||    
T  20146231 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtacggcgttgtttgtctttcccctcttgttcaggtgtttgttcggtt---attg 20146135  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcat 561  Q
    | ||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  20146134 ttagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcat 20146085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 420 - 555
Target Start/End: Original strand, 37425131 - 37425261
Alignment:
Q  420 gtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca 519  Q
    |||||||| ||| ||||||| |||||| |||||||||||||||||||||||||  ||||||||||    ||||||||| || ||| ||||||     |||    
T  37425131 gtcgtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcattcttgtttcgtacaggtatttgttcagtttagattg-----tca 37425225  T
Q  520 gcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||| ||||||||| ||||| ||||||||| |||||    
T  37425226 gctttgatccagtgtagatcaaatcaatgactttgg 37425261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 434 - 562
Target Start/End: Original strand, 8957327 - 8957455
Alignment:
Q  434 acgttggtttgttcgtcgtctttgtgcgacgttgtttgt-ttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagt 532  Q
    |||||| |||||| || |||||||||||||||||||||| ||||||   || | | |||| |||| || ||||||||||||||||||||||||||||| |    
T  8957327 acgttgttttgtttgttgtctttgtgcgacgttgtttgtcttttctctcttgt-tcaggtgtttgttcagttcagattgtcagatcagcttcgatccaat 8957425  T
Q  533 gcagatccaatcaatgattttggtgtcatc 562  Q
    |||||| ||| |||||| ||| | ||||||    
T  8957426 gcagattcaaccaatgacttttgcgtcatc 8957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 28500825 - 28500930
Alignment:
Q  449 tcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatg 548  Q
    ||||||| ||||| | |||||||| |||||| ||||  |  |||||||| |||||||||||||||| |||| |||||||||||| | |||||||||||||    
T  28500825 tcgtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcatatcaacttcgatccagtacggatccaatcaatg 28500924  T
Q  549 attttg 554  Q
    | ||||    
T  28500925 actttg 28500930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 40565170 - 40565022
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttg--tttttcttgtttctcttaggtatttgatcggttcagat 509  Q
    |||||||||||||||| ||| |||  || |||||| ||||||||||||||||||||||||  |||| | |  |||    |||| |||| | | |||| ||    
T  40565170 gtgatttcgtcgtcttagtgcgaccatgttttgtttgtcgtctttgtgcgacgttgtttgtcttttccctagttc----aggtgtttgtttgattcatat 40565075  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||| |||||||||||||| |||||| |||||| ||||| ||||||    
T  40565074 tgtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatc 40565022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 14910691 - 14910549
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||| ||||||| ||  ||| ||| |||||||| ||| ||||||  || |||||||| |||||||||||  | | ||||||| ||| || ||||||    
T  14910691 gtgatttcatcgtcttagtacgacattgttttgttcgccgtatttgtgtaacattgtttgtctttcttgtttcgttcatgtatttgttcgttttagattg 14910592  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||||| ||||||||||  ||| ||| ||||||||| ||||    
T  14910591 tcagatcaacttcgatccatcgcatatcaaatcaatgactttg 14910549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 441 - 562
Target Start/End: Complemental strand, 12524650 - 12524529
Alignment:
Q  441 tttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcc 540  Q
    |||||| ||||| ||||| ||||||||||||||||||||| ||   | |||| ||    |  || |||||||||||||| ||| ||||||||| ||||||    
T  12524650 tttgttagtcgtttttgtacgacgttgtttgtttttcttgctttgttcaggtgttaatccaatttagattgtcagatcaactttgatccagtgtagatcc 12524551  T
Q  541 aatcaatgattttggtgtcatc 562  Q
    ||||||||| ||||||||||||    
T  12524550 aatcaatgactttggtgtcatc 12524529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 545
Target Start/End: Original strand, 13080252 - 13080386
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctt--tgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagat 509  Q
    |||||||||||||||| |||  |||||| ||| |||||||||||  ||||||||||||||||| ||||||| |||  | ||||||||| |||| ||| ||    
T  13080252 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgtgcgacgttgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaat 13080350  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatca 545  Q
    | ||| ||||||||  |||||| ||| ||| |||||    
T  13080351 tatcatatcagcttaaatccagggcatatcgaatca 13080386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 37425095 - 37425153
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    ||||||| |||||||| ||| ||||||| |||||| |||||||||||||||||||||||    
T  37425095 gtgattttgtcgtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgttt 37425153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 506 - 562
Target Start/End: Original strand, 34950639 - 34950695
Alignment:
Q  506 agattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||| || |||| || |||||| |||||||||||||||||||||||||||||||    
T  34950639 agattgtaagttcagtttggatccactgcagatccaatcaatgattttggtgtcatc 34950695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 554
Target Start/End: Complemental strand, 17325600 - 17325535
Alignment:
Q  489 aggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||| |||| ||| ||||||||||||||||| |||| |||| |||||||||||| |||||| ||||    
T  17325600 aggtgtttgttcgattcagattgtcagatcaacttcaatccggtgcagatccaaccaatgactttg 17325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 28423818 - 28423774
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtcttt 456  Q
    |||||||||||||| || |||||| ||||||||||||||||||||    
T  28423818 gtgatttcgtcgtcatcttgtgacattggtttgttcgtcgtcttt 28423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 32391410 - 32391370
Alignment:
Q  284 ttctcttttgtgagccgtcaccaaaattttagtttattctc 324  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  32391410 ttctcttttgtgagccgtcaccaaaaccttagtttattctc 32391370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 309
Target Start/End: Complemental strand, 22397734 - 22397703
Alignment:
Q  278 ttccccttctcttttgtgagccgtcaccaaaa 309  Q
    ||||||||||||||||||||||||||||||||    
T  22397734 ttccccttctcttttgtgagccgtcaccaaaa 22397703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 2979441 - 2979384
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgttt 470  Q
    |||||||||||||||| ||| |||||||  |||||||||||| ||||||| ||||||||    
T  2979441 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcggcgttgttt 2979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Original strand, 25770795 - 25770848
Alignment:
Q  502 gttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||| ||||||||||||| | ||||||||||||||| ||||| |||| |||||    
T  25770795 gttcaaattgtcagatcagttccgatccagtgcagattcaatcgatgactttgg 25770848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 28423990 - 28423953
Alignment:
Q  272 tctcttttccccttctcttttgtgagccgtcaccaaaa 309  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  28423990 tctcttttccctttctcttttgtgagccgtcatcaaaa 28423953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 35455268 - 35455341
Alignment:
Q  489 aggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    |||| |||| ||||||||  || ||||||||||||||||| | || |||| |||||||| | ||||||||||||    
T  35455268 aggtgtttgttcggttcaagttttcagatcagcttcgatcgaatgtagattcaatcaataactttggtgtcatc 35455341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 123; Significance: 7e-63; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 1142 - 988
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1142 gtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattg 1043  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  1042 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 1286 - 1250
Alignment:
Q  269 ttttctcttttccccttctcttttgtgagccgtcacc 305  Q
    |||||||||||||| |||||| |||||||||||||||    
T  1286 ttttctcttttccctttctctcttgtgagccgtcacc 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 412 - 566
Target Start/End: Original strand, 36628 - 36777
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||     ||||| |||||||||| |||||||||||| ||||||||||    
T  36628 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-----ttttttttgtttctctcaggtatttgatcagttcagattg 36722  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  36723 tcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacg 36777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 412 - 566
Target Start/End: Complemental strand, 9672 - 9519
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||||||  |||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |||  || |||||     
T  9672 gtgatttcgtcgtcttcgtacgacgttggtt-gttcgtcttctttgtgcgacgttttttgttttccttgtttctcttaggtatttaatcactttagatta 9574  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  9573 tcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacg 9519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 426 - 566
Target Start/End: Original strand, 11127 - 11267
Alignment:
Q  426 ttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcg 525  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||| |    
T  11127 ttcgtgcgacgttggtttgttcgccgtctttatgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgatttagattgtcaaatcagcttgg 11226  T
Q  526 atccagtgcagatccaatcaatgattttggtgtcatccacg 566  Q
    ||| |||||| ||||||||||||| ||||  ||||||||||    
T  11227 atctagtgcatatccaatcaatgactttgacgtcatccacg 11267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 412 - 549
Target Start/End: Complemental strand, 1156 - 1019
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||| |||| |||||||| ||  | ||||||||| | |||||| ||||    
T  1156 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattg 1057  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatga 549  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  1056 tcagatcaacttcgatctagtgcagatccaatcaatga 1019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 10326 - 10184
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| || ||||| ||| ||||||||||||||||||||||||||||   ||||||||| |||||||||||   |||||||||| | || ||| ||||    
T  10326 gtgatttggttgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcgtctaggtatttgtttggatcaaattg 10227  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaatgattttg 554  Q
    |||||| ||||| |||||| || ||||||||||||||||||||    
T  10226 tcagattagctttgatccaatggagatccaatcaatgattttg 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 546
Target Start/End: Complemental strand, 6800 - 6668
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcggttcagattg 511  Q
    ||||||| || ||||| |||  |||||||||||||||||||||  ||||| |||| ||||| |||||||||||  | ||| |||||||||||| ||||||    
T  6800 gtgattttgttgtcttagtgcaacgttggtttgttcgtcgtct--gtgcggcgttatttgtctttcttgtttcgttcaggcatttgatcggtttagattg 6703  T
Q  512 tcagatcagcttcgatccagtgcagatccaatcaa 546  Q
    |||||||| |||||||| | || | ||||||||||    
T  6702 tcagatcaacttcgatcaactgaaaatccaatcaa 6668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 137073 - 137002
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgttt 483  Q
    |||||||||||||||| ||  ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  137073 gtgatttcgtcgtcttagtacgacgttgttttgttcatcgtctttgtgcgacgttgtttgtttttcttgttt 137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 555
Target Start/End: Complemental strand, 136997 - 136946
Alignment:
Q  504 tcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    |||||||||||||||| |||||||| |||||||||| |||||| || |||||    
T  136997 tcagattgtcagatcaacttcgatcaagtgcagatcaaatcaacgactttgg 136946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 555
Target Start/End: Complemental strand, 11793 - 11648
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctt--aggtatttgatcggttcagat 509  Q
    |||||||| ||||||| ||| || |||| ||||   |||| |||||||||||||| ||||| ||| || ||| || |  | ||||||| ||  |||||||    
T  11793 gtgatttcatcgtcttagtgcgaagttgttttgcctgtcgactttgtgcgacgttatttgtcttttttttttttcgttcatgtatttgttcaattcagat 11694  T
Q  510 tgtcagatcagcttcgatccagtgcagatccaatcaatgattttgg 555  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  11693 tgtcaaatcagcttcgatccagtgcagatcaaatcaatgattttgg 11648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 25436 - 25377
Alignment:
Q  503 ttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgattttggtgtcatc 562  Q
    ||||||||||||||| ||||| |||||| ||||||||||| |||||||||||| ||||||    
T  25436 ttcagattgtcagattagctttgatccaatgcagatccaaccaatgattttggcgtcatc 25377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 545
Target Start/End: Complemental strand, 91385 - 91285
Alignment:
Q  445 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctta-ggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaat 543  Q
    |||||||||||||| ||||||||| ||| |||||| ||| | ||| | |||||| |||||||| ||||||| ||||| || ||||||||| ||||| |||    
T  91385 ttcgtcgtctttgtacgacgttgtatgtctttctt-tttttgttatgatatttgttcggttcaaattgtcaaatcagttttgatccagtgtagatcaaat 91287  T
Q  544 ca 545  Q
    ||    
T  91286 ca 91285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 554
Target Start/End: Original strand, 962 - 1016
Alignment:
Q  501 ggttcagattgtcagatcagcttcga-tccagtgcagatccaatcaatgattttg 554  Q
    ||||||||||||||||||| |||||| | ||||||| ||||||||||||| ||||    
T  962 ggttcagattgtcagatcaacttcgatttcagtgcacatccaatcaatgactttg 1016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 105151 - 105201
Alignment:
Q  412 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcga 462  Q
    |||||||||| ||||| | ||||||||| |||||| |||||||||||||||    
T  105151 gtgatttcgttgtcttagcgtgacgttgttttgtttgtcgtctttgtgcga 105201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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