View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19802_low_9 (Length: 268)
Name: NF19802_low_9
Description: NF19802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19802_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 259
Target Start/End: Original strand, 479140 - 479381
Alignment:
| Q |
18 |
gcttgtacatcattacatttttcatccctctgtgaaggtgaatatgaggtgagtcagtgaatgttctttaccttgggcctccttgagcattccnnnnnnn |
117 |
Q |
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| T |
479140 |
gcttgtacatcattacatttttcatccctctgtgaaggtgaatatgaggtgagtcagtgaatgttctttaccttgggcctccttgagcattccttttttt |
479239 |
T |
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| Q |
118 |
atgtcatacatacatacatgtcacatgaaactaactatagtgtaaaatgaattgaatattgacaagaaactcaactgcatgttaattactcattgagttg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
479240 |
atgtcatacatacatacatgtcacatgaaactaactatagtgtaaaatgaactgaatattgacaagaaactcaactgcatgttaattactcattgagttg |
479339 |
T |
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| Q |
218 |
ttgtgtcttcttatttgtggtgttgaatgcgttcgttcatct |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
479340 |
ttgtgtcttcttatttgtggtgttgaatgcgttcgttcatct |
479381 |
T |
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