View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19803_high_20 (Length: 310)
Name: NF19803_high_20
Description: NF19803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19803_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 32 - 296
Target Start/End: Complemental strand, 8007235 - 8006971
Alignment:
| Q |
32 |
aagttagatagatatatgcacatgtgactgcatataatcctgtgttgggcgtcgcattatgaaactttagtcttttttacattattccttgcttaatctt |
131 |
Q |
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| T |
8007235 |
aagttagatagatatatacacttgtgactgcatataatcctgtgttgggcgtcgcattatgaaactttagtcttttttacattattccttgcttaatctt |
8007136 |
T |
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| Q |
132 |
cattttctgatatttttagcctgaagattcgaccaatgcatcatggtattttaagtcatctagaattattattttttaattatctcattataatatcaaa |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
8007135 |
cattttctgatatttttagcctgaagattcgaccaatgcatcatggtattttaagtcatctagaattattattttttaattatctcattataatataaaa |
8007036 |
T |
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| Q |
232 |
ttttgcagttggaaatgctcaagaatccagagacaacgaggtcaaagatcaatggaagtctgatg |
296 |
Q |
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| T |
8007035 |
ttttgcagttggaaatgctcaagaatccagagacaacgaggtcgaagatcaatggaagcctgatg |
8006971 |
T |
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