View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19803_high_31 (Length: 208)
Name: NF19803_high_31
Description: NF19803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19803_high_31 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 5026988 - 5027148
Alignment:
| Q |
48 |
ccaccacttagacccaagaaacgaagaatatgtttctcattcacaacttatgcaaacaatctcatacaaaacctcaaatcctccaacattattatcgaac |
147 |
Q |
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| T |
5026988 |
ccaccacttagacccaagaaacgaagaatatgtttctcattcacaacatatgcaaacgatctcatacaaaacctcaaatcctctaacattattatcgaac |
5027087 |
T |
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| Q |
148 |
aaggactcaccgaatcagaatttcaacatctcgaatcaaaattcaaccttaaattcccacc |
208 |
Q |
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| T |
5027088 |
aaggactcaccgaatcagaatttcaacatctcgaatcaaaattcaaccttaaattcccacc |
5027148 |
T |
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