View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19803_low_24 (Length: 260)
Name: NF19803_low_24
Description: NF19803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19803_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 32065530 - 32065288
Alignment:
| Q |
1 |
aattgtgagtgctggaggcagtacagtatggggaaatcctgcagatgtagggagtgttgtaggaggggaagcatttgatgtggttttggacaacaatggc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32065530 |
aattgtgagtgctggaggcagtacagtatggggaaatcctgcagatgtagggagtgttgtaggaggggaagcatttgatgtggttttggacaacaatggc |
32065431 |
T |
|
| Q |
101 |
aaggatcttgaggctgtgaggtttgttgtattgattcttgttagcttttgttcaatgattaacttgtatcgtatgccttcatgttaactcaacaggtttt |
200 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32065430 |
aaggatcttgagtctgtgaggtttgttgtattgattcttgttagcttttgttcaatgattaacttgtattgtatgccttcatgttaactcaacaggtttt |
32065331 |
T |
|
| Q |
201 |
aagatgtaagagcagcagcgtgcaacacgtacaatatgtttat |
243 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32065330 |
aagatgtaagagcagcagcgtgcaacacgtacaatttgtttat |
32065288 |
T |
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