View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19804_low_11 (Length: 332)
Name: NF19804_low_11
Description: NF19804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19804_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 2 - 313
Target Start/End: Original strand, 22703874 - 22704185
Alignment:
| Q |
2 |
catacatgaaatggtgaagtagtgactacaatatgcttaaaaaacagtacgtatttctcagattctcaatagatgtgcggaatatggtattaaaacctca |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22703874 |
catacatgaaatggtgaagtagtgactacaatatgcttaaaaaacagtacgtatttctcagattctcaatagatgtgcggaatatggtattaaaacctca |
22703973 |
T |
|
| Q |
102 |
cattctaacatggaaatagaaaaaaccacattaagaataatcattttattactcgtgaaatatcttgaagataacacttatatctcatgatatcttaaag |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22703974 |
cattctaacatggaaatagaaaaaaccacattaagaataatcattttattactcgtgaaatatcttgaagataacacttatatctcatgatatcttaaag |
22704073 |
T |
|
| Q |
202 |
tacttgtaaaagtcattttataatctaaccaactttggtaactagttatacaatctaaccaagtttagtaactagtttcaacttcaataaaagggctaac |
301 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22704074 |
tacttgtaaaagtcattttataatctaaccaactttggtaactagttatacaatctaaccaagtttagtaactagtttcaacttcaataaaagggctaac |
22704173 |
T |
|
| Q |
302 |
cttgtcaatctt |
313 |
Q |
| |
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|||||||||||| |
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| T |
22704174 |
cttgtcaatctt |
22704185 |
T |
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