View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19805_low_19 (Length: 261)
Name: NF19805_low_19
Description: NF19805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19805_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31010586 - 31010342
Alignment:
| Q |
1 |
actaatagctccatcaaaaaaccctcaaccttataaccagaccatggttttaaattacggtttcggtaaacattgcagttctgatgtcattgtagagacc |
100 |
Q |
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| T |
31010586 |
actaatagctccatcaaaaaatcctcaaccttataaccagaccatggttttaaattacggtttcgataaacattgcagttgtgatgtcattgtagagacc |
31010487 |
T |
|
| Q |
101 |
tcactatcctttatattgcagccgcaaacagtttaaaaccatgatcaagagattttattgtttaatcaagcctgacggtaaaaaatatcaattaggcaag |
200 |
Q |
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||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
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| T |
31010486 |
tcaatatcctttatattgcggccgcaaacaatttaaaaccatgattaagagattttattgtttaatcaagcctgagggtaaaaaatatccattaggcaag |
31010387 |
T |
|
| Q |
201 |
accaagttcccaacactgcaataacaatcccaaacaccataattg |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31010386 |
accaagttcccaacactgcaataacaatcccaaacaccataattg |
31010342 |
T |
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