View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19806_low_1 (Length: 729)

Name: NF19806_low_1
Description: NF19806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19806_low_1
NF19806_low_1
[»] chr7 (26 HSPs)
chr7 (4-712)||(36463923-36464627)
chr7 (12-423)||(8414489-8414886)
chr7 (12-423)||(3934742-3935139)
chr7 (16-422)||(3932507-3932899)
chr7 (93-422)||(19788938-19789272)
chr7 (93-420)||(19786632-19786964)
chr7 (52-422)||(8733495-8733850)
chr7 (17-422)||(3051993-3052387)
chr7 (224-424)||(8731174-8731359)
chr7 (52-300)||(42678669-42678934)
chr7 (336-422)||(18395411-18395497)
chr7 (336-422)||(42678571-42678657)
chr7 (336-422)||(16496953-16497039)
chr7 (336-422)||(16535135-16535221)
chr7 (336-422)||(16630441-16630527)
chr7 (224-334)||(28610315-28610424)
chr7 (12-138)||(16497078-16497204)
chr7 (15-138)||(16535260-16535383)
chr7 (15-138)||(16630279-16630402)
chr7 (336-425)||(21769066-21769155)
chr7 (12-80)||(16535288-16535356)
chr7 (12-80)||(16630306-16630374)
chr7 (246-298)||(18395336-18395388)
chr7 (176-420)||(19093846-19094092)
chr7 (368-422)||(42680808-42680862)
chr7 (12-80)||(3932533-3932601)
[»] chr8 (8 HSPs)
chr8 (12-422)||(21268120-21268525)
chr8 (12-422)||(36379465-36379863)
chr8 (12-423)||(36377180-36377578)
chr8 (52-422)||(4876820-4877176)
chr8 (52-422)||(4879148-4879504)
chr8 (52-424)||(24519151-24519510)
chr8 (16-120)||(21268447-21268551)
chr8 (12-75)||(4879138-4879201)
[»] chr1 (13 HSPs)
chr1 (12-422)||(29833076-29833471)
chr1 (12-422)||(734579-734974)
chr1 (12-422)||(2403835-2404223)
chr1 (52-422)||(8933549-8933913)
chr1 (224-422)||(10909108-10909292)
chr1 (224-423)||(10911352-10911536)
chr1 (224-422)||(13011698-13011881)
chr1 (204-301)||(29833852-29833949)
chr1 (336-422)||(29833960-29834046)
chr1 (16-146)||(2416660-2416791)
chr1 (221-422)||(2409957-2410136)
chr1 (147-306)||(18353733-18353894)
chr1 (63-134)||(419213-419284)
[»] chr4 (14 HSPs)
chr4 (16-422)||(45161971-45162364)
chr4 (12-420)||(45166859-45167254)
chr4 (52-423)||(42468438-42468795)
chr4 (52-422)||(42470768-42471124)
chr4 (84-301)||(50855868-50856085)
chr4 (151-422)||(19429076-19429334)
chr4 (224-422)||(13774151-13774336)
chr4 (96-298)||(8739264-8739467)
chr4 (224-419)||(13776449-13776630)
chr4 (336-422)||(50855771-50855857)
chr4 (160-286)||(43179575-43179710)
chr4 (165-299)||(24908156-24908298)
chr4 (12-75)||(42468742-42468805)
chr4 (361-422)||(8739501-8739562)
[»] chr2 (16 HSPs)
chr2 (12-422)||(31486671-31487069)
chr2 (12-424)||(31488955-31489355)
chr2 (24-311)||(29801774-29802067)
chr2 (224-422)||(42275556-42275739)
chr2 (224-422)||(42277782-42277965)
chr2 (14-423)||(23859767-23860188)
chr2 (52-304)||(34576694-34576969)
chr2 (336-422)||(5164151-5164237)
chr2 (336-416)||(8995076-8995156)
chr2 (336-416)||(15730013-15730093)
chr2 (360-422)||(39816089-39816151)
chr2 (361-414)||(34576612-34576665)
chr2 (12-123)||(15729871-15729981)
chr2 (259-300)||(8995169-8995210)
chr2 (12-88)||(34576903-34576979)
chr2 (21-88)||(29801802-29801869)
[»] chr5 (19 HSPs)
chr5 (12-422)||(11852175-11852561)
chr5 (12-300)||(37207660-37207948)
chr5 (12-301)||(23164347-23164636)
chr5 (12-301)||(22600700-22600989)
chr5 (12-301)||(11850014-11850303)
chr5 (157-300)||(37215396-37215539)
chr5 (52-300)||(1779316-1779581)
chr5 (336-423)||(11849916-11850003)
chr5 (336-422)||(23164254-23164340)
chr5 (336-423)||(22601000-22601088)
chr5 (336-422)||(37215551-37215638)
chr5 (336-422)||(1779222-1779303)
chr5 (12-263)||(1779587-1779855)
chr5 (344-422)||(21743719-21743797)
chr5 (351-422)||(37207998-37208070)
chr5 (224-311)||(21743622-21743709)
chr5 (361-422)||(15469197-15469258)
chr5 (258-298)||(1779181-1779221)
chr5 (52-119)||(37207640-37207707)
[»] scaffold0599 (1 HSPs)
scaffold0599 (187-422)||(1579-1801)
[»] chr3 (6 HSPs)
chr3 (224-422)||(4530835-4531020)
chr3 (230-423)||(4533138-4533318)
chr3 (16-298)||(18966221-18966518)
chr3 (149-224)||(1701104-1701179)
chr3 (167-223)||(8535522-8535578)
chr3 (16-88)||(39578235-39578307)
[»] scaffold0050 (6 HSPs)
scaffold0050 (145-311)||(29261-29426)
scaffold0050 (145-311)||(31574-31741)
scaffold0050 (361-422)||(29453-29514)
scaffold0050 (361-422)||(31768-31829)
scaffold0050 (11-99)||(31439-31527)
scaffold0050 (12-99)||(29122-29209)
[»] scaffold0008 (2 HSPs)
scaffold0008 (336-422)||(88445-88531)
scaffold0008 (16-100)||(73069-73153)
[»] scaffold1361 (1 HSPs)
scaffold1361 (336-422)||(53-140)
[»] scaffold0098 (1 HSPs)
scaffold0098 (344-422)||(3707-3785)
[»] chr6 (2 HSPs)
chr6 (84-290)||(21199149-21199374)
chr6 (361-420)||(20642300-20642359)
[»] scaffold0312 (1 HSPs)
scaffold0312 (63-134)||(11287-11358)
[»] scaffold0045 (2 HSPs)
scaffold0045 (361-425)||(64082-64144)
scaffold0045 (361-425)||(71414-71476)


Alignment Details
Target: chr7 (Bit Score: 639; Significance: 0; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 639; E-Value: 0
Query Start/End: Original strand, 4 - 712
Target Start/End: Complemental strand, 36464627 - 36463923
Alignment:
Q  4 gatgaagaagaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36464627 gatgaagaagaatgatgaaaaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaataataatatagaagtctctag 36464528  T
Q  104 aatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatc 203  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464527 aatactagggaataataaggaagctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatc 36464428  T
Q  204 catatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggca 303  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464427 catatctccagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggca 36464328  T
Q  304 tactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctt 403  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464327 tactcaagatactcaagcatagtcaagc----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctt 36464232  T
Q  404 tccttttgtccctgagccaaatgattcctcgaaaaatgctttgtgctacattaggatgatacttgnnnnnnnggaatccaaaccagacacacagaacgtg 503  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  36464231 tccttttgtccctgagccaaacgattcctcgaaaaatgctttgtgctacattaggatgatacttgtttttttggaatccaaaccagacacacagaacgtg 36464132  T
Q  504 tatacgatgttttatgacttggattcgcatgatttacttccatacttccatagcttaataatgaattttattttggtaagtgactacgattccattggag 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  36464131 tatacgatgttttatgacttggattcgcatgatttacttccatacttccatagcttaataatgaattttattttggaaggtgactacgattccattggag 36464032  T
Q  604 tttttgattggttatcttgtgaacataaacacaacctcaaacataaggatcataggtttctttccctgtctctaaactcctttaacatagacatgatgac 703  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464031 tttttgattggttatcttgtgaacataaacacaacctcaaacataaggatcataggtttctttccctgtctctaaactcctttaacatagacatgatgac 36463932  T
Q  704 ttcataaac 712  Q
    |||||||||    
T  36463931 ttcataaac 36463923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 12 - 423
Target Start/End: Complemental strand, 8414886 - 8414489
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  8414886 agaatgatgaagaataatatggaagactctagaatactagagaataatgtggaagtatctagaacactaaagaataatatagaagtctctagaatactag 8414787  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||    
T  8414786 ggaataataaggaaactactagacactactaaataagcactagggaagtcttgacttttctagat-cttctagttttatatactaaaatatccatatctc 8414688  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  8414687 tagacttttctttgtttctagatttttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggc--------- 8414597  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 411  Q
    ||||||||||||| ||||||    |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  8414596 atactcaagcatattcaagc----attgaatcattcaaataatataacttttctttgagaatattagagtgtttttctattttctctacctttccttttg 8414501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 12 - 423
Target Start/End: Original strand, 3934742 - 3935139
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||| |||||||||     |||||||| ||||||||||||||| |||||| ||||| || |||| ||||||||||||||    
T  3934742 agaatgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactag 3934841  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  3934842 ggaataataaggaagctactagatactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 3934941  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||          |    
T  3934942 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagaatagtataaataaggctcaccatctagtgttttg----------g 3935031  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 411  Q
    ||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3935032 atactcaagcataatcaagc----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttg 3935127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 16 - 422
Target Start/End: Original strand, 3932507 - 3932899
Alignment:
Q  16 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaa 115  Q
    ||||||| ||||||||||||| |||||||||     |||||||| ||||||||||||||| |||||| ||||| || |||| ||||||||||||||||||    
T  3932507 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactagggaa 3932606  T
Q  116 taataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctaga 215  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3932607 taataaggaagctactagatactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctaga 3932706  T
Q  216 cttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatac 315  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||          |||||    
T  3932707 cttttctttgtttctagatatttctagtttgtaatggagagccttcctagaatagtataaataaggctcaccatctagtgttttg----------gatac 3932796  T
Q  316 tcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccc 415  Q
    ||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3932797 tcaagcataatcaagc----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccc 3932892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 93 - 422
Target Start/End: Original strand, 19788938 - 19789272
Alignment:
Q  93 gaagtctctagaatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgt 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||    
T  19788938 gaagtctctagaatactagggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgt 19789037  T
Q  193 actagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccaccta 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19789038 actagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttactagagtagtataaataaggctcaccaccta 19789137  T
Q  293 gtgttttggcatactcaagatactcaagcatagtcaag-----cattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttc 386  Q
    ||||||||||||| |||||| | ||||| ||| |||||     ||   ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19789138 gtgttttggcatattcaagacattcaag-atactcaagataatcaagcattgaatgattcaagtaatataacttttcctttgagaatattagagtgtttc 19789236  T
Q  387 tcaattttctctacctttccttttgtccctgagcca 422  Q
    || |||||||||||||||||||||||||||||||||    
T  19789237 tctattttctctacctttccttttgtccctgagcca 19789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 93 - 420
Target Start/End: Original strand, 19786632 - 19786964
Alignment:
Q  93 gaagtctctagaatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgt 192  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||    
T  19786632 gaagtctctagaatattagggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgt 19786731  T
Q  193 actagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccaccta 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19786732 actagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccaccta 19786831  T
Q  293 gtgttttggcatactcaagatactcaagcatagtcaag-----cattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttc 386  Q
    ||||||||||||| |||||| | ||||| ||| |||||     ||   ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19786832 gtgttttggcatattcaagacattcaag-atactcaagataatcaagcattgaatgattcaagtaatataacttttcctttgagaatattagagtgtttc 19786930  T
Q  387 tcaattttctctacctttccttttgtccctgagc 420  Q
    || |||||||||||||||||||||||||||||||    
T  19786931 tctattttctctacctttccttttgtccctgagc 19786964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 52 - 422
Target Start/End: Complemental strand, 8733850 - 8733495
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 151  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8733850 agaataatatggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcac 8733751  T
Q  152 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 251  Q
    |||||   |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  8733750 taggg---tcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaaag 8733654  T
Q  252 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||  ||||||    |||||| ||||||| |    
T  8733653 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaaga---------atcatcaagc----attgaagcattcaaat 8733567  T
Q  352 aatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||||||||    
T  8733566 aatataatcttttctttgagaatattagagagtttctctattttctctaccttctcttttgtccctgagcca 8733495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 422
Target Start/End: Original strand, 3051993 - 3052387
Alignment:
Q  17 gatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag----g 112  Q
    |||||| ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||         
T  3051993 gatgaagaataatatggaagactctagaatactagagaataatgtcgaagtctctataacactaaagaataatatagaagtctctagaatactagataat 3052092  T
Q  113 gaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctct 212  Q
     ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  3052093 aaataataaggaagctactagacactactaaataagcattagggaagtcttaacttttctagatccttctagttttatgtactagaatatccatatctct 3052192  T
Q  213 agacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaaga 312  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         | |    
T  3052193 agacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg---------ata 3052283  T
Q  313 tactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgt 412  Q
    |||||||| ||| ||||||    |||||| ||||||| ||||||||  |||||||||||||| ||||  ||||||  |||||||||||| ||||||||||    
T  3052284 tactcaagtatactcaagc----attgaagcattcaaataatataaactttctttgagaataataga--gtttctttattttctctaccattccttttgt 3052377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 224 - 424
Target Start/End: Complemental strand, 8731359 - 8731174
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| | | ||           |     
T  8731359 tgtttctagatatttctaatttgtaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttaggcacatttaa-----------ag 8731271  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 423  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  8731270 aatcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttatctacctttccttttgtccctgagccaa 8731175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 52 - 300
Target Start/End: Complemental strand, 42678934 - 42678669
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagaca--ctactaaat---- 145  Q
    |||||||| ||||||| ||||||| |||||| ||||| || |||||||||| ||||||| ||||||||||||| |||||||||||  |||||||||        
T  42678934 agaataatatggaagtttctagaaaactaaagaataatatggaagtctctaaaatactatggaataataaggaagctactagacactctactaaataaaa 42678835  T
Q  146 --aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt---------tgtttctagat 234  Q
      |||||||||| || |||| |  ||||||||||||||||||  ||||  ||||||||||||| | ||||| | ||||||         |||||||||||    
T  42678834 taaagcactaggaaaatcttaatgtttctagatccttctagtcatatgacctagagtatccatgtttctaggcctttctttgtaatcaatgtttctagat 42678735  T
Q  235 atttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 300  Q
    | ||||||||| ||||| ||| |||||| |  |||||||||||||||||||||||| |||||||||    
T  42678734 aattctagtttgtaatgtagaaccttcccaaggtagtataaataaggctcaccaccaagtgttttg 42678669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 18395411 - 18395497
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18395411 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctaagcca 18395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 42678657 - 42678571
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  42678657 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctttattttctctacctttccttttgtccctgagcca 42678571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 16497039 - 16496953
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16497039 attgaatcatttaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 16496953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 16535221 - 16535135
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16535221 attgaatcatttaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccccgagcca 16535135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 16630441 - 16630527
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16630441 attgaatcatttaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccccgagcca 16630527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 28610424 - 28610315
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| |||| | || ||||||| ||||||    
T  28610424 tgtttctagatatttctagtttgtaatgtagagcctttctagagtagtataaataaggctcaccaccaagtgtttaggcacattc-agatactgaagcat 28610326  T
Q  324 agtcaagcatt 334  Q
    | |||||||||    
T  28610325 actcaagcatt 28610315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 16497204 - 16497078
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaat-agcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatacta 110  Q
    |||||||| || ||||||||||||| ||||||||| | || |||||||| |||| | |||||||| | |||| |||||  | ||||| ||||||||||||    
T  16497204 agaatgatcaagaataatatggaagtctctagaatgatca-agaataatatggatgcctctagaataataaagaataatgtggaagtttctagaatacta 16497106  T
Q  111 gggaataataaggatgctactagacact 138  Q
     ||||||||||||| |||||||||||||    
T  16497105 tggaataataaggaagctactagacact 16497078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 16535383 - 16535260
Alignment:
Q  15 atgatgaaaaataatatggaagactctagaat-agcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactaggg 113  Q
    ||||| || ||||||||||||| || |||||| | || |||||||| |||||| |||||||| | |||| |||||  | |||||||||||||||||| ||    
T  16535383 atgatcaagaataatatggaagtctatagaatgatca-agaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatgg 16535285  T
Q  114 aataataaggatgctactagacact 138  Q
    |||||||| || |||||||||||||    
T  16535284 aataataaagaagctactagacact 16535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 16630279 - 16630402
Alignment:
Q  15 atgatgaaaaataatatggaagactctagaat-agcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactaggg 113  Q
    ||||| || ||||||||||||| || |||||| | || |||||||| |||||| |||||||| | |||| |||||  | |||||||||||||||||| ||    
T  16630279 atgatcaagaataatatggaagtctatagaatgatca-agaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatgg 16630377  T
Q  114 aataataaggatgctactagacact 138  Q
    |||||||| || |||||||||||||    
T  16630378 aataataaagaagctactagacact 16630402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 425
Target Start/End: Complemental strand, 21769155 - 21769066
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 425  Q
    |||||| ||||||| |||||  |  ||||||||||||||||| || ||||||| ||||||||||||||||||||  ||||||||| ||||    
T  21769155 attgaaacattcaaataataacaactttctttgagaatattaaagagtttctctattttctctacctttcctttcatccctgagcaaaat 21769066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 16535356 - 16535288
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacacta 80  Q
    |||||||| || ||||||||||||| ||||||||||  | |||||||||||||||||||||||| ||||    
T  16535356 agaatgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatacta 16535288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 16630306 - 16630374
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacacta 80  Q
    |||||||| || ||||||||||||| ||||||||||  | |||||||||||||||||||||||| ||||    
T  16630306 agaatgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatacta 16630374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 18395336 - 18395388
Alignment:
Q  246 ataatggagagccttcctagagtagtataaataaggctcaccacctagtgttt 298  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  18395336 ataatgtagagccttcctagagtagtataaataaggctcaccactaagtgttt 18395388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 420
Target Start/End: Complemental strand, 19094092 - 19093846
Alignment:
Q  176 tccttctagttttatgtactagagtatccatatctctagacttttctttgt---------ttctagatatttctagtttataatggagagc----cttcc 262  Q
    |||||||||  ||||  |||||||||||||| |||||||||||||||||||         || |||||||||||||||| ||||| ||||     ||| |    
T  19094092 tccttctagacttataaactagagtatccatgtctctagacttttctttgtaatcgatatttttagatatttctagtttgtaatgtagagtacgtctttc 19093993  T
Q  263 tagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttt 362  Q
    ||||||||||||||||||| || ||||| ||||||  |||||||||||| || ||||  ||  |||| |||| |   ||| ||  ||   ||||||  ||    
T  19093992 tagagtagtataaataaggttcgccaccaagtgttcaggcatactcaag-tattcaaaaat--tcaaacattca---aataatataa---atataaactt 19093902  T
Q  363 tctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 420  Q
    |||||||||||||||||| ||||||  ||||||||||||| |||||||| ||||||||    
T  19093901 tctttgagaatattagagagtttct--attttctctacctctccttttgaccctgagc 19093846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 42680808 - 42680862
Alignment:
Q  368 gagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||    
T  42680808 gagaatattagagtgtttctctattttctctacctttcattttgttcctcagcca 42680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 3932533 - 3932601
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacacta 80  Q
    ||||||||||| ||||||||||||| |||||||| |  | |||||||| |||||| |||||||| ||||    
T  3932533 agaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatacta 3932601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 295; Significance: 1e-165; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 12 - 422
Target Start/End: Complemental strand, 21268525 - 21268120
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  21268525 agaatggtgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactag 21268426  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21268425 ggaataataaggaagctactagacactactaaataaa-actagggaagtcttgacttttctagatccttctagttttatgtactaaagtatccatatctc 21268327  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |     
T  21268326 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcactacctagtgtttaggcataatccaa 21268227  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttcctttt 410  Q
    ||||||||| ||| ||||||    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  21268226 atactcaag-ataatcaagc----attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctaccttttctttt 21268132  T
Q  411 gtccctgagcca 422  Q
    ||||||||||||    
T  21268131 gtccctgagcca 21268120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 12 - 422
Target Start/End: Complemental strand, 36379863 - 36379465
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  36379863 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactag 36379764  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  36379763 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 36379664  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 310  Q
    | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  36379663 tggacttttctttgtttccagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctgggtgttttggcatactcaa 36379564  T
Q  311 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 409  Q
    |||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  36379563 gataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttccttt 36379478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 12 - 423
Target Start/End: Complemental strand, 36377578 - 36377180
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  |  ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  36377578 agaatggtgaagaataatatggaagactctagaatactaaggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactag 36377479  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  36377478 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 36377379  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 310  Q
    |  ||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36377378 tgaacttttctttgttttcagatatttctactttgtaatggagagccttcctagagtagtataaataaggctcaccacctaagtgttttggcatactcaa 36377279  T
Q  311 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 409  Q
     ||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||    
T  36377278 aataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttcc-tt 36377194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 52 - 422
Target Start/End: Original strand, 4876820 - 4877176
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 151  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  4876820 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagaaactactaaataagcac 4876919  T
Q  152 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 251  Q
    |||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4876920 tagggaagtcttaacttttctagatccttctaggcttatgtactatagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 4877019  T
Q  252 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 351  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||              ||||||| ||||||||    
T  4877020 gagagccttcctagagtagtataaataaggctcaccatctagtgttttgacatactcaagataatcaagc--------------attgaatgattcaagt 4877105  T
Q  352 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4877106 aatataacttttccttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4877176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 52 - 422
Target Start/End: Original strand, 4879148 - 4879504
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 151  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  4879148 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagaaactactaaataagcac 4879247  T
Q  152 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 251  Q
    |||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4879248 tagggaagtcttaacttttctagatccttctaggcttatgtactatagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 4879347  T
Q  252 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 351  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||              ||||||| ||||||||    
T  4879348 gagagccttcctagagtagtataaataaggctcaccatctagtgttttgacatactcaagataatcaagc--------------attgaatgattcaagt 4879433  T
Q  352 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4879434 aatataacttttccttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 52 - 424
Target Start/End: Complemental strand, 24519510 - 24519151
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 151  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||| ||| ||||||||||||||||    
T  24519510 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctaccagatactactaaataagcac 24519411  T
Q  152 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 251  Q
    |||||||||||| ||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24519410 tagggaagtcttaacttttctagatccttctaggcttatgtacaaaagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 24519311  T
Q  252 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 351  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||         |||| ||||||| ||||||    ||||||||||||||||    
T  24519310 gagagccttcctagagtagtataaataaggctcaccatctagtgttttggca---------tactgaagcataatcaagc----attgaatcattcaagt 24519224  T
Q  352 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaa 424  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24519223 aatataacttttcttagagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaaa 24519151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 21268551 - 21268447
Alignment:
Q  16 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaa 115  Q
    ||||||| ||||||||||||| ||||||||| |   |||||||| |||||| |||||||| |||| | |||||  | ||||||||||||| ||||  |||    
T  21268551 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaa 21268452  T
Q  116 taata 120  Q
    |||||    
T  21268451 taata 21268447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 4879138 - 4879201
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaa 75  Q
    ||||||||||| ||||||||||||| ||||||||| |   |||||||| |||||| ||||||||    
T  4879138 agaatgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaa 4879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 12 - 422
Target Start/End: Complemental strand, 29833471 - 29833076
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29833471 agaatgatgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactag 29833372  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  29833371 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatgtctc 29833272  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||     
T  29833271 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcacattcaa- 29833173  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 411  Q
    ||  ||||||              ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  29833172 atcatcaagc--------------attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttg 29833087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 12 - 422
Target Start/End: Complemental strand, 734974 - 734579
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||    
T  734974 agaatgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctttagaagactaaagaataatatagaagtctctagaatactag 734875  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  734874 ggaataacaaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggtttatgtactagagtatccatatctc 734775  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg-catactcaa 310  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  734774 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagaatagtataaataaggctcaccacctagtgttttggtcatactcaa 734675  T
Q  311 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttcctttt 410  Q
    |||| ||||||              ||||||| ||||||||||||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||    
T  734674 gataatcaagc--------------attgaatgattcaagtaatataacttttccttgagaatatt--agtgtttctctattttctctacctttcctttt 734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 422
Target Start/End: Complemental strand, 2404223 - 2403835
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||| || ||||||||||| |||  |||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  2404223 agaatgatgaagaataaaatagaagactctaggatactagagaataatgtggaaatctctagaagactaaagaataatatagaagtctctagaatactag 2404124  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  2404123 ggaataataaggaagctactagatactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 2404024  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||   |||      
T  2404023 tagacttttctttgtttctagatatttctagtttgtaatggagagtcttcctagagtagtataaataaggttcaccacttagtgttttggca---tca-- 2403929  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttcctttt 410  Q
        |||||||||              ||| ||||||| ||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  2403928 ----tcaagcata--------------gaaacattcaaataatataatattttctttgagaatattagagagtttctctattttctctacctttcctttt 2403847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 52 - 422
Target Start/End: Complemental strand, 8933913 - 8933549
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaataa-- 147  Q
    |||||||| ||||| | |||| || |||||| || || || |||||||||| ||||||| ||||||||||||| |||| ||||||||  |||||||||      
T  8933913 agaataatatggaaatttctaaaaaactaaagaaaaatatggaagtctctaaaatactatggaataataaggaagctattagacactctactaaataaaa 8933814  T
Q  148 ----gcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgt---------ttctagat 234  Q
        |||||||| || |||| |  ||||||||||||||||||  |||| |||||||||||||| | ||||| | |||||||||         ||||||||    
T  8933813 taaagcactaggaaaatcttaatgtttctagatccttctagtcatatgaactagagtatccatgtttctaggcctttctttgtaatcaatgtttctagat 8933714  T
Q  235 atttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcatt 334  Q
    | ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||  |||||||||       ||||            | |||||||||    
T  8933713 aattctagtttgtaatgtagaaccttcctagagtagtataaataaggctcaccactaagtgttttg-------caag------------aatcaagcatt 8933633  T
Q  335 aattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
        ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8933632 ----gaatcattcaagtaatataacttttctttgaaaatattagagtgtttctctattttctctaccttttcttttgtccctgagcca 8933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 224 - 422
Target Start/End: Original strand, 10909108 - 10909292
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  10909108 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 10909196  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    | |||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10909197 aatcaagcatt----gaatcattcaagtaatataacttttcgtttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 10909292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 224 - 423
Target Start/End: Original strand, 10911352 - 10911536
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  10911352 tgtttctagatatttctagtttgtaatgtagacccttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 10911440  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 423  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10911441 aatcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttatctacctttccttttgtccctgagccaa 10911536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 224 - 422
Target Start/End: Original strand, 13011698 - 13011881
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| | || | ||||           |     
T  13011698 tgtttctagatatttttagtttttaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttagacacattcaa-----------ag 13011786  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    | |||||||||    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13011787 aatcaagcatt----gaatcattcaaataatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgttcctgagcca 13011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 29833852 - 29833949
Alignment:
Q  204 catatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 301  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29833852 catatctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcactacctagtgttttgg 29833949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 29833960 - 29834046
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29833960 attgaatccttcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 29834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 2416791 - 2416660
Alignment:
Q  16 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctct-agaacactaaataataaaatagaagtctctagaatactaggga 114  Q
    ||||||| ||||| || ||||||||||| ||| ||||||||||||||||||||||| |||| |||| | ||||| |||||| ||||||||||||||||||    
T  2416791 tgatgaagaataaaatagaagactctaggataccagagaataatgtggaagtctctcagaagactacagaataatatagaactctctagaatactaggga 2416692  T
Q  115 ataataaggatgctactagacactactaaata 146  Q
    |||||||||| ||||||||| |||||||||||    
T  2416691 ataataaggaagctactagatactactaaata 2416660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 221 - 422
Target Start/End: Complemental strand, 2410136 - 2409957
Alignment:
Q  221 ctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaag 320  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||      |||||    
T  2410136 ctttgtttctagatattgctaatttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggca---tca------tcaag 2410046  T
Q  321 catagtcaagcattaattgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgag 419  Q
    ||||              ||| ||||||| ||||||||  |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  2410045 cata--------------gaaacattcaaataatataatattttctttgagaatattatagagtttctctattttctctacctttccttttgtccctgag 2409960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 306
Target Start/End: Original strand, 18353733 - 18353894
Alignment:
Q  147 agcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttt--tctttgtttctagatatttctagtt 244  Q
    ||||||||| || ||||  ||||||||||||||||||||  |||| |||||||||||||| ||| |    | |  ||  ||||||||||| |||||| ||    
T  18353733 agcactaggaaaatcttatcttttctagatccttctagtcatatgaactagagtatccatgtcttttatttctaatcaatgtttctagatctttctattt 18353832  T
Q  245 tataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatac 306  Q
    | |||||  |||| || |||||||||||||| || |||||||| || |||||||||||||||    
T  18353833 tgtaatgtggagcattactagagtagtataattagggctcacctccaagtgttttggcatac 18353894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 419284 - 419213
Alignment:
Q  63 gaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactaga 134  Q
    |||||||||||||||||||| ||||| || |||||||||| |||  ||  |||||||||||| |||||||||    
T  419284 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactaga 419213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 270; Significance: 1e-150; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 16 - 422
Target Start/End: Original strand, 45161971 - 45162364
Alignment:
Q  16 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaa 115  Q
    ||||||| ||||||||||||| ||||||||| |   |||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||    
T  45161971 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactagggaa 45162070  T
Q  116 taataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctaga 215  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45162071 taataagaaagctactagacactactaaataagcactagggaagtctttacttttctagatccttctaggtttatgtactagagtatccatatctctaga 45162170  T
Q  216 cttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatac 315  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||         ||||    
T  45162171 cttttctttgtttctagatatttctagtttgtaatggagagtcttcctagaatagtataaataaggctcaccacctagtgttttggc---------atac 45162261  T
Q  316 tcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccc 415  Q
    ||||||||  |||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45162262 tcaagcatcatcaaac----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccc 45162357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 12 - 420
Target Start/End: Original strand, 45166859 - 45167254
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||| ||||||||| |   |||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  45166859 agaatgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactag 45166958  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  45166959 ggaataataaggaagctactagacactactaaataagcactagggaagtctttacttttctagatccttctaggtttatgtactagagtatccatatctc 45167058  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||             
T  45167059 tagacttttctttgtttctagatatttctagtttgtaatggagagtcttcctagaatagtataaataaggctcaccacctagtgttttggc--------- 45167149  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 411  Q
    ||||||||||||  |||| |    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||  || |||||||||||    
T  45167150 atactcaagcatcatcaaac----attgaatcattcaaataatataacttttttttaagaatattagagtgtttctctattttcggtaactttccttttg 45167245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 52 - 423
Target Start/End: Complemental strand, 42468795 - 42468438
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 151  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  42468795 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagatactactaaataagcac 42468696  T
Q  152 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 251  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42468695 tagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 42468596  T
Q  252 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 351  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||          |||||| ||||||  ||||||    |||||| |||||||||    
T  42468595 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg----------gatactgaagcatcatcaagc----attgaagcattcaagt 42468510  T
Q  352 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 423  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42468509 aatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 42468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 52 - 422
Target Start/End: Complemental strand, 42471124 - 42470768
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 151  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  42471124 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatacttgggaataataaggaagctactagatactactaaataagcac 42471025  T
Q  152 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 251  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42471024 tagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 42470925  T
Q  252 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 351  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||          |||||| ||||||  ||||||    |||||| |||||||||    
T  42470924 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg----------gatactgaagcatcatcaagc----attgaagcattcaagt 42470839  T
Q  352 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42470838 aatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42470768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 84 - 301
Target Start/End: Complemental strand, 50856085 - 50855868
Alignment:
Q  84 aataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttcta 183  Q
    ||||| || |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50856085 aataatatggaagtctctagaatactatggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttcta 50855986  T
Q  184 gttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggct 283  Q
    |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  50855985 ggcttatgtaccagagtatccatatctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggtt 50855886  T
Q  284 caccacctagtgttttgg 301  Q
    ||||||||||||||||||    
T  50855885 caccacctagtgttttgg 50855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 151 - 422
Target Start/End: Complemental strand, 19429334 - 19429076
Alignment:
Q  151 ctagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataat 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  19429334 ctagggaagtcttgacttttctagatccttctagttttatgtactagagtattcatatctctagacttttctttgtttatagatatttctagtttgtaat 19429235  T
Q  251 ggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaag 350  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |  ||| |||||||||||||||              |||||||||||||||    
T  19429234 ggagagcctacctagagtagtataaataaggctcaccaccaagtgtttagatatattcaagatactcaagc--------------attgaatcattcaag 19429149  T
Q  351 taatata-acttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  19429148 taatatatacttttctttgagaatattagagagtttctctattttctctacctttccttttgtccgtgagcca 19429076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 224 - 422
Target Start/End: Original strand, 13774151 - 13774336
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||    
T  13774151 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactgaag---------cat 13774241  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
      |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13774242 catcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 13774336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 96 - 298
Target Start/End: Original strand, 8739264 - 8739467
Alignment:
Q  96 gtctctagaatactagggaataataaggatgctactagacactactaaa--taagcactagggaagtcttgacttttctagatccttctagttttatgta 193  Q
    |||||||||||||||  |||||||||||| ||||||| |||| ||||||  || ||||||||||| |||| |  ||||||||||||||||||  |||| |    
T  8739264 gtctctagaatactaatgaataataaggaagctactatacac-actaaaattatgcactagggaaatcttaatgtttctagatccttctagtcatatgaa 8739362  T
Q  194 ctagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctag 293  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||| |||||| ||    
T  8739363 ctagagcatccatatctctagatttttctttgtttctagatatttctagtttgtaatgtagagccttcctagagttgtataaacaaggcttaccaccaag 8739462  T
Q  294 tgttt 298  Q
    |||||    
T  8739463 tgttt 8739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 224 - 419
Target Start/End: Original strand, 13776449 - 13776630
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |  ||||||| |||| | ||||           |     
T  13776449 tgtttctagatatttctagtttgtaatgcagagccttcctagagtagtataaataaggctcaccgctaagtgtttaggcacattcaa-----------ag 13776537  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgag 419  Q
    | |||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13776538 aatcaagcatt----gaatcattcaagtaatataacttttcgtttgagaatattagagtgtttctctattttctctacctttccttttgtccctgag 13776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 50855857 - 50855771
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50855857 attgaatcattcaagtaatataacttttcctcgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 50855771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 286
Target Start/End: Original strand, 43179575 - 43179710
Alignment:
Q  160 tcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt---------tgtttctagatatttctagtttataat 250  Q
    |||| |||||| | ||||||||||||  |||| |||||||||||||| |||||| |||||||||         ||||| |||||||||||||||| ||||    
T  43179575 tcttaacttttttggatccttctagtcatatgaactagagtatccatgtctctatacttttctttgtaatcaatgtttgtagatatttctagtttgtaat 43179674  T
Q  251 ggagagccttcctagagtagtataaataaggctcac 286  Q
    | ||||  || |||||||||||||||| ||||||||    
T  43179675 gcagagtttttctagagtagtataaattaggctcac 43179710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 24908298 - 24908156
Alignment:
Q  165 acttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt--------tgtttctagatatttctagtttataatggagag 256  Q
    |||||||||| || || ||||  |||| |||| ||||||||||||| ||||||||||||        || ||||| || |||||| ||| ||| |  ||     
T  24908298 acttttctaggtctttttagtcatatgaactaaagtatccatatctttagacttttcttgtaataaatgcttctacatctttctactttgtaacgtggaa 24908199  T
Q  257 ccttcctagagtagtataaataaggctcaccacctagtgtttt 299  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  24908198 ccttcctagagtagtataaatagggttcaccaccaagtgtttt 24908156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 42468805 - 42468742
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaa 75  Q
    ||||||||||| ||||||||||||| ||||||||| |   |||||||| |||||| ||||||||    
T  42468805 agaatgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaa 42468742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 8739501 - 8739562
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||| ||||||| ||||||| ||||||  |||||||||  |||||||||| |||||||||||    
T  8739501 tttccttgagaacattagagagtttctttattttctctttctttccttttatccctgagcca 8739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 270; Significance: 1e-150; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 12 - 422
Target Start/End: Original strand, 31486671 - 31487069
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  || |||||||||||||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  31486671 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagcctctagaagactagagaataatatagaagtctctagaatactag 31486770  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  31486771 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 31486870  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 310  Q
    | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31486871 tggacttttctttgtttccagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctaagtgttttggcatactcaa 31486970  T
Q  311 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 409  Q
    |||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31486971 gataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttccttt 31487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 12 - 424
Target Start/End: Original strand, 31488955 - 31489355
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  || |||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||    
T  31488955 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagtctctaaaagactaaagaataatatagaagtctctagaatactag 31489054  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||||    
T  31489055 ggaataataaggaagctactagacactactaaataagcactagggaagtcttagcttttctagatccttctaagcttatgtactagagtatccatatctc 31489154  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 310  Q
    | |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  31489155 tggacttttctttgtttccagatatttctagtttgtaatggagagccttcctaaagtagtataaataaggctcaccacctaagtgttttggcatactcaa 31489254  T
Q  311 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 409  Q
    |||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31489255 gataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttccttt 31489340  T
Q  410 tgtccctgagccaaa 424  Q
    ||||||| |||||||    
T  31489341 tgtccctaagccaaa 31489355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 24 - 311
Target Start/End: Original strand, 29801774 - 29802067
Alignment:
Q  24 aataatatggaagactctagaatagcagagaa-taatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataag 122  Q
    ||||||||||||| ||||||||||  | | || |||| |||||||||||||||||| ||| ||||| |  ||||| ||||||||||||  ||||||||||    
T  29801774 aataatatggaagtctctagaataataaaaaaataatatggaagtctctagaacaccaaagaataatagggaagtatctagaatactaaagaataataag 29801873  T
Q  123 gat----gctactagacactactaaa--taagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagac 216  Q
    ||     ||||||||||||| |||||  |||||||| |  || |||| |  |||||| |||||||||||  |||| |||| || ||||||||||||||||    
T  29801874 gaatctagctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaactatagcatccatatctctagac 29801972  T
Q  217 ttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    |||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  29801973 ttttctttgtttgtagatatttctagtttgtaatggggagtcttcctagagtagtataaataaggctcaccaccaagtgtttaggcatagtcaag 29802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 224 - 422
Target Start/End: Complemental strand, 42275739 - 42275556
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  42275739 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 42275651  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    | ||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42275650 aatcaagtatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42275556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 224 - 422
Target Start/End: Complemental strand, 42277965 - 42277782
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  42277965 tgtttctagatatttctagtttgtaatgtagagtcttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 42277877  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42277876 aatcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42277782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 423
Target Start/End: Original strand, 23859767 - 23860188
Alignment:
Q  14 aatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagt----ctctagaacactaaataataaaatagaagtctctagaatact 109  Q
    ||||||||| ||  |||||||| |||||||||||  |  ||||||| ||||| |    ||||||||||||||| ||||| || | |||||||||||||||    
T  23859767 aatgatgaagaaagatatggaacactctagaatactaatgaataatatggaattaagcctctagaacactaaagaataatatgggagtctctagaatact 23859866  T
Q  110 agggaataataaggatgctactagaca--ctactaaataag-----------cactagggaagtcttgacttttctagatccttctagttttatgtacta 196  Q
    | | ||||||||||| ||||||| |||  |||||||||||            |||||| ||| ||||  |||||||||||||||||||| ||||| ||||    
T  23859867 atgaaataataaggaagctactaaacattctactaaataaaataaaattagacactagagaaatcttagcttttctagatccttctagtcttatgaacta 23859966  T
Q  197 gagtatccatatctctagacttttctttgt---------ttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcacc 287  Q
    |||||| ||| | ||||| | |||||||||         ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  23859967 gagtatgcatgtttctaggcctttctttgtaatcaatatttctagataattctagtttgtaatgtagagccttcctagagtagtataaataaggctcacc 23860066  T
Q  288 acctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttct 387  Q
    ||| |||||||  | ||| |||||||||||||||              |||||| |||| || |||||  |  |||||||||||||||||||| ||||||    
T  23860067 accaagtgtttacgtatattcaagatactcaagc--------------attgaaacatttaaataataatatctttctttgagaatattagagagtttct 23860152  T
Q  388 caattttctctacctttccttttgtccctgagccaa 423  Q
    | ||||||| | | ||||||||||||||||||||||    
T  23860153 ctattttctatgcttttccttttgtccctgagccaa 23860188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 52 - 304
Target Start/End: Complemental strand, 34576969 - 34576694
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaataa-- 147  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||  ||||||  |||| |||||| ||||||  |||||||||      
T  34576969 agaataatgtggaagtctctagaacactaaagaataatatggaagtctctaaaatactaaagaataacgaggaagctactggacactctactaaataaaa 34576870  T
Q  148 ---------gcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgt---------ttc 229  Q
             ||||||| ||| |||| |||||||||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||         |||    
T  34576869 taaaattacgcactagagaaatcttaacttttctagatccttctagtcatatgaactagagtattcatgtctctagacttttctttgtaatcaatgtttc 34576770  T
Q  230 tagatatttctagtttataatggagagccttcct-agagtagtataaataaggctcaccacctagtgttttggcat 304  Q
    |||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||| | ||||||| |||||    
T  34576769 tagatatttctagtttgtaatgtagagccttcctaagattagtataaataaggctcaccatcaagtgtttaggcat 34576694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 5164237 - 5164151
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5164237 attgaagcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 5164151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 8995156 - 8995076
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccct 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  8995156 attgaatcattcaagtaatataacttttctttgagaatattagagagtttctctattttctctacctttccttttgtccct 8995076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 15730013 - 15730093
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccct 416  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  15730013 attgaatcattcaagtaatataacttttatttgagaatattagagagtttctctattttctctacctttccttttgtccct 15730093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 39816151 - 39816089
Alignment:
Q  360 ttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  39816151 ttttctttgagaatattagagagtttctctattttctctacctttccttttgtccgtgagcca 39816089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 34576665 - 34576612
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtcc 414  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  34576665 tttctttgagaatattagagagtttctctattttctctaccttaccttttgtcc 34576612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 15729871 - 15729981
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||| | |||||||| |  | |||||||||||||||||||||| |||  ||| ||||  |  ||||||||||||||||||     
T  15729871 agaatgatgaagaataatatggatgtctctagaacaataaagaataatgtggaagtctctag-acataaaagaatattaaggaagtctctagaatactaa 15729969  T
Q  112 ggaataataagg 123  Q
     |||||||||||    
T  15729970 agaataataagg 15729981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 8995210 - 8995169
Alignment:
Q  259 ttcctagagtagtataaataaggctcaccacctagtgttttg 300  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  8995210 ttcctagagtagtataaataaggctctccaccaagtgttttg 8995169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 34576979 - 34576903
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataa 88  Q
    ||||||||||| |||||| |||||| |||||||| |  | |||||||| |||||||||||| || |||||| |||||    
T  34576979 agaatgatgaagaataatgtggaagtctctagaacactaaagaataatatggaagtctctaaaatactaaagaataa 34576903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 29801802 - 29801869
Alignment:
Q  21 aaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataa 88  Q
    |||||||||||||||| |||||||| | || ||||||||  |||||| ||||||| |||||| |||||    
T  29801802 aaaaataatatggaagtctctagaacaccaaagaataatagggaagtatctagaatactaaagaataa 29801869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 12 - 422
Target Start/End: Complemental strand, 11852561 - 11852175
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  |   ||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  11852561 agaatggtgaagaataatatggaagactctagaatactatgaaataatgaggaagtctctagaagactaaagaataatatagaagtctctagaatactag 11852462  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||  |||||||||||||||||||||||||    
T  11852461 ggaataataaggaagctactagacactactaaataagcactagggaagtcataacttttctaggaccttctaggcttatgtactagagtatccatatctc 11852362  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  11852361 tagacttttatttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg---------- 11852272  T
Q  312 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 411  Q
              || |||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11852271 ----------atcgtcaagcat----tgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttg 11852186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 12 - 300
Target Start/End: Original strand, 37207660 - 37207948
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  37207660 agaatgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctgtagaatactag 37207759  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  37207760 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatgtctc 37207859  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 300  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37207860 tagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 37207948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 23164636 - 23164347
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  23164636 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactag 23164537  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  23164536 ggaataataaggaagctactagacactactaaataaacactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 23164437  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 301  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23164436 tagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggcccaccacctagtgttttgg 23164347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 12 - 301
Target Start/End: Original strand, 22600700 - 22600989
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||     
T  22600700 agaatgatgaagaataatatggaagactctagaatattagggaataatgtggaagtctctagaagactaaataataatatagaagtctctagaatactat 22600799  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  22600800 ggaataataagaaagctacttgacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 22600899  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 301  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  22600900 tagacttttctttgtttctagatatttctagttggtaatggagagtcttgctaaagtagtataaataaggctcaccacctagtgttttgg 22600989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 11850303 - 11850014
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    |||||| |||| |||||||||||||||||| |||||  |  ||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  11850303 agaatggtgaagaataatatggaagactcttgaatactatggaataatgtggaagtctctagaagactaaagaataatatagaagtctctaaaatactag 11850204  T
Q  112 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 211  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||||||||||||    
T  11850203 ggaataataagaaagctactagacactactaaataagcactagggaagtcttaaattttctagatccttctaggcttatgtacaagagtatccatatctc 11850104  T
Q  212 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 301  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11850103 tagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 11850014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 157 - 300
Target Start/End: Original strand, 37215396 - 37215539
Alignment:
Q  157 aagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagag 256  Q
    ||||||| ||||||||||||||||||||  |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||  ||||| ||||    
T  37215396 aagtcttaacttttctagatccttctaggcttatatactagagtatccatgtctctaaacttttctttgtttctagatatttctagttggtaatgaagag 37215495  T
Q  257 ccttcctagagtagtataaataaggctcaccacctagtgttttg 300  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  37215496 ccttcctagagtagtataaataaggctcaccacatagtgttttg 37215539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 52 - 300
Target Start/End: Complemental strand, 1779581 - 1779316
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaat---- 145  Q
    |||||||| ||||||| ||||||| |||||| ||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||  |||||||        
T  1779581 agaataatatggaagtttctagaaaactaaagaataatatagaagtctctaaaatactatggaataataaggaagctactagacactccactaaataaaa 1779482  T
Q  146 --aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt---------tgtttctagat 234  Q
      |||||||||  || |||| |  ||||||||||||||||||  |||| |||||||||||||| | ||||| | ||||||         |||||||||||    
T  1779481 taaagcactagaaaaatcttaatgtttctagatccttctagtcatatgaactagagtatccatgtttctaggcctttctttgtaatcaatgtttctagat 1779382  T
Q  235 atttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 300  Q
    | ||||||||| ||||| |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  1779381 aattctagtttgtaatgtagagccttcctagagtggtataaataaggctcaccaacaagtgttttg 1779316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 336 - 423
Target Start/End: Complemental strand, 11850003 - 11849916
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 423  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11850003 attgaatcattcaaataatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 11849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 23164340 - 23164254
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23164340 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 23164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 22601000 - 22601088
Alignment:
Q  336 attgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 423  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  22601000 attgaagcattcaaataatataatcttttctttgagaatattagagagtttctctattttctctaccttcccttttgtccctgagccaa 22601088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 37215551 - 37215638
Alignment:
Q  336 attgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37215551 attgaagcattcaaataatataatcttttctttgagaatattagagagtttctctattttctctaccttcccttttgtccctgagcca 37215638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 1779303 - 1779222
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||     |||||||||||||||||||||    
T  1779303 attgaatcattcaagtaatataacttttctttgagaatattagagtgttcctctattttct-----tttccttttgtccctgagcca 1779222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 12 - 263
Target Start/End: Complemental strand, 1779855 - 1779587
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 111  Q
    ||||||||||| ||||||||||||| |  |||||||  | |||| |||||||||||||| | ||||||||| ||||| || ||||||||||||||||||     
T  1779855 agaatgatgaagaataatatggaagtccttagaatactaaagaaaaatgtggaagtctccataacactaaagaataatatggaagtctctagaatactaa 1779756  T
Q  112 ggaataataaggatgctactagaca--ctact-----aaat-aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatc 203  Q
     |||||||   || |||||||||||  |||||     |||| |||| |||||||| |||| |  ||||||||||||||||||  |||| |||||| ||||    
T  1779755 agaataatgtcgaagctactagacattctactggataaaataaagcgctagggaaatcttaatgtttctagatccttctagtcatatgaactagaatatc 1779656  T
Q  204 catatctctagacttttctt---------tgtttctagatatttctagtttataatggagagccttcct 263  Q
    | ||||||||| | |||| |         |||||||||||||||||||||| ||||| | |||||||||    
T  1779655 cctatctctaggcctttccttgtaatcaatgtttctagatatttctagtttgtaatgtaaagccttcct 1779587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 21743719 - 21743797
Alignment:
Q  344 attcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||| ||||||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  21743719 attcaaataatataaactttctttgagaatattagagagtttctctattttctctacctttccttttgtccctgggcca 21743797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 37207998 - 37208070
Alignment:
Q  351 taatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||||| |||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37207998 taatataatcttttcttcgagaatattagagagtttctctattttctctaccttcccttttgtccctgagcca 37208070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 21743622 - 21743709
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    ||||| ||||||||| |||||| || || ||||||||||||||||||||||||||||  |||||||| |||| || ||||||||||||    
T  21743622 tgtttttagatatttttagtttgtagtgtagagccttcctagagtagtataaataagattcaccaccaagtggttaggcatactcaag 21743709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 15469197 - 15469258
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  15469197 tttctttgagaatattagagagtttctctattttttttacctttccttttgtccctgagcca 15469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 1779221 - 1779181
Alignment:
Q  258 cttcctagagtagtataaataaggctcaccacctagtgttt 298  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  1779221 cttcctagagtagtataaataaggctcaccaccaagtgttt 1779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 37207640 - 37207707
Alignment:
Q  52 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataat 119  Q
    |||||||| |||||||||||||||   | || ||||| || |||| ||||||||||||||||||||||    
T  37207640 agaataatatggaagtctctagaatgatgaagaataatatggaagactctagaatactagggaataat 37207707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 167; Significance: 5e-89; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 187 - 422
Target Start/End: Original strand, 1579 - 1801
Alignment:
Q  187 ttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcac 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1579 ttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcac 1678  T
Q  287 cacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttc 386  Q
    ||||||||||||||||         ||||||||||||  ||||||    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1679 cacctagtgttttggc---------atactcaagcatcatcaagc----attgaatcattcaagtaatataacttttctttgaggatattagagtgtttc 1765  T
Q  387 tcaattttctctacctttccttttgtccctgagcca 422  Q
    || |||||||||||||||||||||||||||||||||    
T  1766 tctattttctctacctttccttttgtccctgagcca 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 1e-64; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 224 - 422
Target Start/End: Original strand, 4530835 - 4531020
Alignment:
Q  224 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 323  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||    
T  4530835 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactgaag---------cat 4530925  T
Q  324 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
      |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4530926 catcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4531020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 230 - 423
Target Start/End: Original strand, 4533138 - 4533318
Alignment:
Q  230 tagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaa 329  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||  ||||    
T  4533138 tagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactgaag---------catcatcaa 4533228  T
Q  330 gcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 423  Q
    |||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4533229 gcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 4533318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 18966518 - 18966221
Alignment:
Q  16 tgatgaaaaataatatggaagactct--agaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactaggg 113  Q
    ||||||| ||||||||||||| ||||  ||||||  | ||||||||||||||||||||||||||| ||| ||||| |  |||||||||||||||||||      
T  18966518 tgatgaagaataatatggaagtctctctagaatactaaagaataatgtggaagtctctagaacaccaaagaataatagggaagtctctagaatactagat 18966419  T
Q  114 aataataaggatgctactagacact--actaaat-----------aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagt 200  Q
    ||||||||||  ||||||||| |||  |||||||           |||||||||| || |||| |  ||||||||||||||||||  || ||||||||||    
T  18966418 aataataaggtagctactagatactctactaaatgaaataaaattaagcactaggaaaatcttaatgtttctagatccttctagtcatacgtactagagt 18966319  T
Q  201 atccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttt 298  Q
    |||||||||||| |||||||||| ||||||||||||||||||| | | |||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  18966318 atccatatctcttgacttttcttggtttctagatatttctagtgtgtcatggagtgtcttcctagagtagtataaataaggctcaccaccaagtgttt 18966221  T

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Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 1701104 - 1701179
Alignment:
Q  149 cactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttcttt 224  Q
    |||||||||| |||| |||||||||||||||||||||  |||| | |||| ||||||||| ||||| |||||||||    
T  1701104 cactagggaaatcttaacttttctagatccttctagtcatatgaattagattatccatatttctaggcttttcttt 1701179  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 8535522 - 8535578
Alignment:
Q  167 ttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt 223  Q
    |||| ||||||||||||||  |||  |||| ||||||||||||||||||||||||||    
T  8535522 ttttttagatccttctagtcatataaactaaagtatccatatctctagacttttctt 8535578  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 39578235 - 39578307
Alignment:
Q  16 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataa 88  Q
    ||||||| ||| ||||||||||||||||||||  | ||||||||||| |||| |  ||||||||||| |||||    
T  39578235 tgatgaagaatgatatggaagactctagaatactaaagaataatgtgaaagtttacagaacactaaagaataa 39578307  T

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Target: scaffold0050 (Bit Score: 99; Significance: 2e-48; HSPs: 6)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 145 - 311
Target Start/End: Original strand, 29261 - 29426
Alignment:
Q  145 taagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtt 244  Q
    |||||||||||||| |||| |  ||||||||||||||||||  |||||||||||  ||||||||||||||||||||||| |||||||||||||| |||||    
T  29261 taagcactagggaaatcttaatgtttctagatccttctagtcatatgtactagaacatccatatctctagacttttctt-gtttctagatatttttagtt 29359  T
Q  245 tataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    | |||||||||| ||||||||||||||||||||||||||||||||| ||||  | ||||||||||||    
T  29360 tgtaatggagagtcttcctagagtagtataaataaggctcaccaccaagtgcgtaggcatactcaag 29426  T

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Target: scaffold0050; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 145 - 311
Target Start/End: Original strand, 31574 - 31741
Alignment:
Q  145 taagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatat--ctctagacttttctttgtttctagatatttctag 242  Q
    |||||||||||||| |||| |  ||||||||||||||||||  |||||||||||  ||||||||  ||||||||||||||| |||| |||||||||||||    
T  31574 taagcactagggaaatcttaatgtttctagatccttctagtcatatgtactagaacatccatatatctctagacttttctt-gtttttagatatttctag 31672  T
Q  243 tttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 311  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  31673 tttgtaatggagagccttcctagagtagtataaataaggctcaccaccaagtgtgtaggcatactcaag 31741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 29453 - 29514
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  29453 tttctttgagaacattagagagtttctctattttctctacctttccttttgtccctgagcca 29514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 31768 - 31829
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  31768 tttctttgagaacattagagagtttctctattttctctacctttccttttgtccttgagcca 31829  T

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Target: scaffold0050; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 31439 - 31527
Alignment:
Q  11 aagaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtct 99  Q
    |||||||||||| ||||||||||||  ||||| || |  | |||| ||||||||||||||||||||||| || ||||| || |||||||    
T  31439 aagaatgatgaagaataatatggaactctctaaaacactaaagaacaatgtggaagtctctagaacactcaagaataatatggaagtct 31527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 29122 - 29209
Alignment:
Q  12 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtct 99  Q
    ||||||||||| ||||||||||||| ||||| || |  | |||| ||||||||||||||||||||| | || ||||| || |||||||    
T  29122 agaatgatgaagaataatatggaagtctctaaaacactaaagaacaatgtggaagtctctagaacattcaagaataatatggaagtct 29209  T

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Target: scaffold0008 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 88445 - 88531
Alignment:
Q  336 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  88445 attgaatcattcaagtaatataacttttctttgagaatattagagtctttctctattttctctacctttccttttgtccctgagcca 88531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 73069 - 73153
Alignment:
Q  16 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctc 100  Q
    ||||||| ||||||||||||| ||||||||| |   |||||||| ||||||||||||||| |||||| ||||| |||||||||||    
T  73069 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctc 73153  T

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Target: scaffold1361 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold1361
Description:

Target: scaffold1361; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 53 - 140
Alignment:
Q  336 attgaatcattcaagtaatataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  53 attgaatcattcaagtaatataacttttcgtttgagaatattaaagtgtttctctattttctctacctttccttttgtccctgagcca 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 344 - 422
Target Start/End: Complemental strand, 3785 - 3707
Alignment:
Q  344 attcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 422  Q
    |||||| ||||||||  |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  3785 attcaaataatataaactttctttgagaatattagagagttactctattttctctacctttccttttgtccctgagcca 3707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 84 - 290
Target Start/End: Original strand, 21199149 - 21199374
Alignment:
Q  84 aataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaataa------gcactagggaagtcttgacttttctaga 175  Q
    ||||| || |||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||||      |||||||  || |||| |  ||||||||    
T  21199149 aataatatggaagtctctagaatactatggaataataaggaagctactatacactctactaaataaaataaagcactagttaaatcttaatgtttctaga 21199248  T
Q  176 tccttctagttttatgtactagagtatccatat--ctctagacttttctttgt---------ttctagatatttctagtttataatggagagccttccta 264  Q
    ||||||||||  |||| ||| ||||||||||||  |||||| | |||| ||||         ||||||||||||||||||| ||||| | |||||||||     
T  21199249 tccttctagtcatatgaactggagtatccatatgtctctaggcctttcattgtaatcaatgtttctagatatttctagtttgtaatgtacagccttcctg 21199348  T
Q  265 gagtagtataaataaggctcaccacc 290  Q
    ||||| ||||||||||| ||||||||    
T  21199349 gagtactataaataaggttcaccacc 21199374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 20642300 - 20642359
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 420  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  20642300 tttctttgagaatattagagaatttctctattttctctacctttcattttgtccctgagc 20642359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 11287 - 11358
Alignment:
Q  63 gaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactaga 134  Q
    |||||||||||||||||||| ||||| || |||||||||| |||  ||  |||||||||||| |||||||||    
T  11287 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactaga 11358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 64082 - 64144
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 425  Q
    ||||||||||||||||  || ||||||| ||||||| |||||||| ||||||| |||| ||||||    
T  64082 tttctttgagaatatt--agggtttctctattttctttacctttcattttgtctctgatccaaat 64144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 71414 - 71476
Alignment:
Q  361 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 425  Q
    ||||||||||||||||  || ||||||| ||||||| |||||||| ||||||| |||| ||||||    
T  71414 tttctttgagaatatt--agggtttctctattttctttacctttcattttgtctctgatccaaat 71476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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