View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19807_high_5 (Length: 224)
Name: NF19807_high_5
Description: NF19807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19807_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15151050 - 15150838
Alignment:
| Q |
1 |
tctaatcttacacaactccatgctttattcaagtatatgttttcggttgaatttacacttacccgagacaatgtaactccaccacctccgcttgccccaa |
100 |
Q |
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| T |
15151050 |
tctaatcttacacaactccatgctttattcaagtatatgttttcggttgaatttacacttacccgagacaatgtaactccaccacctccgcttgccccaa |
15150951 |
T |
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| Q |
101 |
agagttgttaatggatcaagaggattatgatgcactcaat------caaaaaataaataagggagtgattaagattaaaatattgcaataacaaataaca |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15150950 |
agagttgttaatggatcaagaggattatgatgcactcaatcaaacacaaaaaataaataagggagtgattaagattaaaatattgcaataacaaataaca |
15150851 |
T |
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| Q |
195 |
gaaagtgaaaact |
207 |
Q |
| |
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||||||||||||| |
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| T |
15150850 |
gaaagtgaaaact |
15150838 |
T |
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