View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19807_low_2 (Length: 348)
Name: NF19807_low_2
Description: NF19807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19807_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 48017267 - 48017602
Alignment:
| Q |
1 |
atgaacagttaaaaaatatttgggcgaaaacaatttgtagttaatttttattttgaaaagtgtactttaaagtcttcactacttatactagnnnnnnngt |
100 |
Q |
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| T |
48017267 |
atgaacagttaaaaaatatttgggcgaaaacaatttgtagttaatttttattttgaaaagtgtactttaaagtcttcactacttatactagaaaaaaggt |
48017366 |
T |
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| Q |
101 |
a-ggggaaaacaacatattgacaatataaaaattgggggaaaattgagcttggcatttgatatattaaagtcattcaaatgttaccatttccagtcatgt |
199 |
Q |
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| T |
48017367 |
agggggaaaacaacatattgacaaaataaaaattgggggaaaattgagcttggcatttgatatattaaagtcattcaaatgttaccatttccagtcatgt |
48017466 |
T |
|
| Q |
200 |
tttatgcactcaatcgacaaacaagaaggacgtaagtggcagaaacaagaatggaaatggctcaacaacaattttatatttacgtacaagtaaagaatat |
299 |
Q |
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| T |
48017467 |
tttatgcactcaatcaacaaacaagaaggacgtaagtggcagaaacaagaatggaaatggctcaacaacaattttatatttacgtacaagtaaagaatat |
48017566 |
T |
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| Q |
300 |
gtaacatgaaactagctatcagagaaagatgacttg |
335 |
Q |
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| T |
48017567 |
gtaacatgaaactagctatcagagaaagatgacttg |
48017602 |
T |
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