View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19808_high_13 (Length: 343)
Name: NF19808_high_13
Description: NF19808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19808_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 46213154 - 46212829
Alignment:
| Q |
1 |
aagaggaaacaggttgttaaaatgcaactcattttttcaattagagtgatttgatacttagccatgtatacaagcaagggaagatggagactatgatttt |
100 |
Q |
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| T |
46213154 |
aagaggaaacaggttgttaaaatgcaactcattttttcaattagagtgatttgatacttagccatgtatacaagcaagggaagatggagactatgatttt |
46213055 |
T |
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| Q |
101 |
tgaagcattggttataaaatgaaatggataggagaagaaaatttaattataagggtttatgctctattctgagtgagatagatatatttaagactttaag |
200 |
Q |
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| T |
46213054 |
tgaagcattggttataaaatgaaatggataggagaagaaaatttaattataagggtttatgctctattctaagtgagatagatatatttaagac-ttaag |
46212956 |
T |
|
| Q |
201 |
agaaaggatagtagtgagtgagtgatatttagtgtgccagcagtgcaatggaaatataaaggtgaacggttgattcttgttgaattggtaaattgaaggg |
300 |
Q |
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| T |
46212955 |
agagaggatagtagtgagtgagtgatatttagtgtgccagcagtgcaatggaaatataaaggtgaacggttgattcttgttgaattggtaaattgaaggg |
46212856 |
T |
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| Q |
301 |
tgaattaaaagagctacctatagaggt |
327 |
Q |
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||||||||||||||||||||||||||| |
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| T |
46212855 |
tgaattaaaagagctacctatagaggt |
46212829 |
T |
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