View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19808_low_16 (Length: 314)

Name: NF19808_low_16
Description: NF19808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19808_low_16
NF19808_low_16
[»] chr3 (32 HSPs)
chr3 (92-296)||(4553163-4553367)
chr3 (95-211)||(30904812-30904927)
chr3 (103-235)||(39655245-39655377)
chr3 (102-211)||(17146146-17146255)
chr3 (102-191)||(44172609-44172698)
chr3 (102-191)||(44179309-44179398)
chr3 (103-191)||(34154398-34154486)
chr3 (102-196)||(29842291-29842385)
chr3 (117-225)||(34119654-34119762)
chr3 (102-154)||(39728654-39728706)
chr3 (103-191)||(44953451-44953539)
chr3 (118-225)||(19111733-19111840)
chr3 (37-71)||(4553107-4553141)
chr3 (103-293)||(29284320-29284510)
chr3 (102-204)||(49025664-49025765)
chr3 (110-211)||(4016040-4016141)
chr3 (102-235)||(10043254-10043387)
chr3 (102-191)||(49580047-49580136)
chr3 (102-211)||(52198138-52198247)
chr3 (95-235)||(3385828-3385968)
chr3 (102-142)||(44106857-44106897)
chr3 (102-238)||(48390786-48390922)
chr3 (112-191)||(42758367-42758446)
chr3 (102-185)||(44639257-44639340)
chr3 (105-167)||(7469818-7469880)
chr3 (102-167)||(20086992-20087056)
chr3 (102-211)||(52572592-52572701)
chr3 (102-167)||(53631887-53631952)
chr3 (123-211)||(4557301-4557389)
chr3 (103-167)||(23546982-23547046)
chr3 (117-157)||(31271307-31271347)
chr3 (103-163)||(44252731-44252791)
[»] chr5 (35 HSPs)
chr5 (92-229)||(16311272-16311409)
chr5 (92-235)||(38972895-38973038)
chr5 (92-204)||(17153142-17153254)
chr5 (93-204)||(27900405-27900516)
chr5 (102-211)||(12866548-12866657)
chr5 (93-204)||(6810132-6810243)
chr5 (94-211)||(12834571-12834688)
chr5 (92-294)||(39422324-39422521)
chr5 (102-225)||(5908671-5908794)
chr5 (92-167)||(7350448-7350523)
chr5 (102-192)||(35311805-35311895)
chr5 (95-200)||(8020591-8020696)
chr5 (102-209)||(15890190-15890296)
chr5 (92-155)||(18451938-18452001)
chr5 (102-204)||(2985130-2985232)
chr5 (102-191)||(4920809-4920898)
chr5 (102-143)||(27088417-27088458)
chr5 (95-192)||(29664947-29665044)
chr5 (102-154)||(10127064-10127116)
chr5 (120-204)||(12773825-12773909)
chr5 (92-204)||(32574942-32575054)
chr5 (92-139)||(12457490-12457537)
chr5 (102-148)||(22694961-22695007)
chr5 (102-191)||(4583102-4583191)
chr5 (102-167)||(6092559-6092624)
chr5 (102-211)||(29245948-29246057)
chr5 (102-167)||(35194030-35194095)
chr5 (102-143)||(40517789-40517830)
chr5 (120-204)||(2681217-2681301)
chr5 (120-204)||(12712561-12712645)
chr5 (123-167)||(20634186-20634230)
chr5 (123-167)||(20650300-20650344)
chr5 (123-191)||(28569038-28569106)
chr5 (94-154)||(38006523-38006583)
chr5 (102-154)||(42987533-42987585)
[»] chr6 (24 HSPs)
chr6 (95-256)||(256443-256604)
chr6 (102-191)||(32532523-32532612)
chr6 (95-191)||(9402565-9402660)
chr6 (102-214)||(27738755-27738867)
chr6 (123-211)||(28079692-28079780)
chr6 (102-189)||(12309555-12309642)
chr6 (92-228)||(13769045-13769181)
chr6 (92-188)||(32959834-32959929)
chr6 (102-191)||(2367309-2367398)
chr6 (103-256)||(27534668-27534821)
chr6 (102-191)||(32853827-32853916)
chr6 (117-204)||(14410858-14410945)
chr6 (92-191)||(20349037-20349136)
chr6 (102-189)||(24602874-24602961)
chr6 (112-209)||(16405408-16405505)
chr6 (103-211)||(3483919-3484027)
chr6 (103-191)||(5863399-5863487)
chr6 (92-188)||(8320814-8320910)
chr6 (92-192)||(10925458-10925558)
chr6 (102-154)||(12141368-12141420)
chr6 (103-191)||(32053072-32053160)
chr6 (102-167)||(24225681-24225746)
chr6 (122-191)||(29199901-29199970)
chr6 (102-154)||(10188126-10188178)
[»] chr8 (31 HSPs)
chr8 (92-211)||(29918580-29918699)
chr8 (95-257)||(8545300-8545461)
chr8 (122-235)||(27777170-27777283)
chr8 (92-190)||(30904019-30904117)
chr8 (102-211)||(20399575-20399684)
chr8 (102-211)||(29108818-29108927)
chr8 (92-196)||(39379591-39379694)
chr8 (94-210)||(45236040-45236156)
chr8 (95-246)||(30481382-30481533)
chr8 (95-158)||(36275018-36275081)
chr8 (121-211)||(15173876-15173966)
chr8 (92-165)||(17108349-17108422)
chr8 (103-211)||(1012603-1012710)
chr8 (110-198)||(43113635-43113723)
chr8 (94-204)||(14186295-14186405)
chr8 (117-211)||(37960958-37961052)
chr8 (93-203)||(17084111-17084223)
chr8 (102-191)||(27932396-27932485)
chr8 (103-167)||(24927933-24927997)
chr8 (103-167)||(32303045-32303109)
chr8 (102-198)||(34777049-34777145)
chr8 (117-204)||(17469253-17469340)
chr8 (110-225)||(24568929-24569044)
chr8 (120-214)||(2183599-2183693)
chr8 (102-204)||(9642354-9642456)
chr8 (102-256)||(39445527-39445681)
chr8 (102-211)||(1063490-1063599)
chr8 (92-157)||(9476063-9476128)
chr8 (98-235)||(14687378-14687515)
chr8 (128-185)||(33631921-33631978)
chr8 (173-293)||(2075748-2075868)
[»] chr4 (39 HSPs)
chr4 (92-230)||(12075609-12075747)
chr4 (92-221)||(21956801-21956930)
chr4 (94-267)||(25941119-25941292)
chr4 (92-165)||(33516115-33516188)
chr4 (145-257)||(39086189-39086301)
chr4 (103-293)||(11122784-11122974)
chr4 (95-201)||(42907868-42907974)
chr4 (92-209)||(4741215-4741331)
chr4 (102-191)||(48459470-48459559)
chr4 (103-235)||(6382245-6382377)
chr4 (102-201)||(47550360-47550459)
chr4 (110-211)||(1724307-1724408)
chr4 (122-211)||(14605922-14606011)
chr4 (95-229)||(19883035-19883169)
chr4 (92-209)||(8843804-8843920)
chr4 (92-209)||(8856768-8856884)
chr4 (120-197)||(21544586-21544663)
chr4 (103-235)||(7608960-7609092)
chr4 (103-235)||(11028063-11028195)
chr4 (103-238)||(6482005-6482140)
chr4 (120-235)||(31415904-31416019)
chr4 (103-238)||(44317525-44317660)
chr4 (93-167)||(12505571-12505645)
chr4 (102-136)||(13015323-13015357)
chr4 (94-204)||(25298837-25298947)
chr4 (117-238)||(26564835-26564956)
chr4 (104-197)||(32585480-32585573)
chr4 (92-197)||(36306764-36306869)
chr4 (103-167)||(5902655-5902719)
chr4 (92-156)||(16575091-16575155)
chr4 (120-204)||(29527819-29527903)
chr4 (122-211)||(1866546-1866635)
chr4 (102-235)||(15987235-15987368)
chr4 (120-197)||(30266341-30266418)
chr4 (120-197)||(30285770-30285847)
chr4 (121-165)||(568425-568469)
chr4 (103-167)||(21423851-21423915)
chr4 (103-143)||(31918623-31918663)
chr4 (103-167)||(55826664-55826728)
[»] chr1 (32 HSPs)
chr1 (103-235)||(10778539-10778671)
chr1 (102-293)||(24236675-24236866)
chr1 (120-234)||(35069862-35069976)
chr1 (102-211)||(19572508-19572617)
chr1 (102-211)||(29871281-29871390)
chr1 (102-211)||(51421842-51421951)
chr1 (103-235)||(49250745-49250877)
chr1 (94-185)||(5283615-5283706)
chr1 (92-163)||(36421740-36421811)
chr1 (95-189)||(48125701-48125795)
chr1 (103-164)||(16903508-16903569)
chr1 (103-211)||(28297919-28298027)
chr1 (150-236)||(33293502-33293588)
chr1 (94-132)||(43513104-43513142)
chr1 (102-191)||(18354096-18354185)
chr1 (102-167)||(29936400-29936465)
chr1 (102-211)||(42439666-42439775)
chr1 (97-197)||(25154837-25154937)
chr1 (103-238)||(12494995-12495130)
chr1 (103-154)||(23966858-23966909)
chr1 (128-211)||(42707833-42707915)
chr1 (102-235)||(34085219-34085352)
chr1 (105-235)||(34611060-34611190)
chr1 (94-167)||(23490811-23490884)
chr1 (103-235)||(39582355-39582487)
chr1 (117-294)||(44615388-44615565)
chr1 (117-294)||(44793004-44793181)
chr1 (103-191)||(3628001-3628089)
chr1 (92-204)||(39219232-39219344)
chr1 (102-154)||(40087516-40087568)
chr1 (96-156)||(41477003-41477063)
chr1 (110-154)||(49741060-49741104)
[»] scaffold0198 (1 HSPs)
scaffold0198 (92-167)||(20779-20854)
[»] chr7 (38 HSPs)
chr7 (95-204)||(23475266-23475376)
chr7 (103-191)||(12980366-12980454)
chr7 (120-210)||(32546198-32546288)
chr7 (178-235)||(8906561-8906618)
chr7 (107-203)||(33841071-33841167)
chr7 (102-189)||(26622939-26623026)
chr7 (95-204)||(19440013-19440123)
chr7 (102-256)||(38152875-38153028)
chr7 (102-191)||(3226962-3227051)
chr7 (104-293)||(7779998-7780187)
chr7 (102-191)||(10072454-10072543)
chr7 (102-235)||(30650619-30650752)
chr7 (103-188)||(38139811-38139896)
chr7 (102-235)||(45885737-45885870)
chr7 (92-156)||(3774047-3774111)
chr7 (108-211)||(22973382-22973485)
chr7 (97-266)||(37217986-37218157)
chr7 (104-191)||(39456031-39456117)
chr7 (102-208)||(44734356-44734462)
chr7 (102-191)||(16866157-16866246)
chr7 (102-191)||(27850342-27850431)
chr7 (102-191)||(41103644-41103733)
chr7 (103-211)||(2630570-2630677)
chr7 (92-191)||(3157061-3157160)
chr7 (103-198)||(18125237-18125332)
chr7 (120-191)||(18683980-18684051)
chr7 (103-198)||(45380096-45380191)
chr7 (102-204)||(3920526-3920628)
chr7 (102-228)||(27896454-27896580)
chr7 (118-211)||(10995830-10995923)
chr7 (102-191)||(17885453-17885542)
chr7 (180-225)||(29014934-29014979)
chr7 (110-210)||(5377081-5377181)
chr7 (120-204)||(18825875-18825959)
chr7 (103-167)||(21702648-21702712)
chr7 (103-211)||(27063127-27063235)
chr7 (103-167)||(35074459-35074523)
chr7 (145-225)||(42908023-42908103)
[»] chr2 (29 HSPs)
chr2 (102-190)||(8915954-8916042)
chr2 (93-204)||(35965310-35965420)
chr2 (92-204)||(17845394-17845507)
chr2 (103-191)||(24414148-24414236)
chr2 (93-201)||(45256798-45256906)
chr2 (92-189)||(30696898-30696995)
chr2 (102-154)||(13830720-13830772)
chr2 (92-163)||(4961495-4961566)
chr2 (117-204)||(6027892-6027979)
chr2 (102-167)||(37999467-37999532)
chr2 (120-209)||(38342517-38342606)
chr2 (103-167)||(9632371-9632435)
chr2 (92-235)||(13954719-13954862)
chr2 (92-235)||(14095926-14096069)
chr2 (128-240)||(24051591-24051703)
chr2 (103-167)||(42798028-42798092)
chr2 (120-203)||(3547168-3547251)
chr2 (103-190)||(35248402-35248489)
chr2 (103-154)||(36128159-36128210)
chr2 (96-198)||(25210355-25210457)
chr2 (92-158)||(40359318-40359384)
chr2 (102-167)||(10208470-10208535)
chr2 (102-211)||(13705357-13705466)
chr2 (102-235)||(15546728-15546861)
chr2 (102-211)||(22900778-22900887)
chr2 (92-156)||(13531923-13531987)
chr2 (103-167)||(30846931-30846995)
chr2 (120-204)||(43371555-43371639)
chr2 (102-190)||(45115542-45115630)
[»] scaffold0013 (2 HSPs)
scaffold0013 (120-210)||(128118-128208)
scaffold0013 (120-197)||(105479-105556)
[»] scaffold0005 (1 HSPs)
scaffold0005 (122-211)||(211367-211456)
[»] scaffold0036 (1 HSPs)
scaffold0036 (110-211)||(33384-33485)
[»] scaffold0184 (1 HSPs)
scaffold0184 (120-211)||(2970-3061)
[»] scaffold0009 (1 HSPs)
scaffold0009 (92-235)||(107363-107506)
[»] scaffold0157 (1 HSPs)
scaffold0157 (93-167)||(14832-14906)


Alignment Details
Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 92 - 296
Target Start/End: Original strand, 4553163 - 4553367
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4553163 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaatcgg 4553262  T
Q  192 aaaaaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgcca 291  Q
     |||||||||||| |||||||||| ||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  4553263 gaaaaactcaaacgcatacctaagcccagtcaaagcggagaaaacccataaatttcagtttggttcaggtgggtacccaagggtgtgaactttgttgcca 4553362  T
Q  292 tgtat 296  Q
    |||||    
T  4553363 tgtat 4553367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 30904927 - 30904812
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||||  |||||||||||||| |||| |||||||||||||||| |||| ||||||||   ||||||| ||| |||| |||||||||||| ||||    
T  30904927 taaattgatttcctacattcgagacggatttgggtatgggttcggggtgggtacctatatccc-cgtacccgtcccgtacccgtgttttgaaatcagaaa 30904829  T
Q  195 aaactcaaacacatacc 211  Q
    |||  ||||| ||||||    
T  30904828 aaagccaaactcatacc 30904812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 39655377 - 39655245
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| |||||||||||| ||||||||| |||||| |||| ||||| ||| |||||||| ||  |||| |||||||| |||||  ||||| ||     
T  39655377 ttttttacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccat 39655278  T
Q  203 acacatacctaagtccaatcaaagcggagaaaa 235  Q
    || |||||| ||  ||||||||| ||| |||||    
T  39655277 acccatacccaaacccaatcaaaacggggaaaa 39655245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 17146255 - 17146146
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | || ||||||| ||||||||||||||||  ||| |||||  || |||||||||||  ||||||||||||| || ||||||||| ||    
T  17146255 attttttacatttgggaagggtttgtgtatgggttcggggtggatacctatataactgttacccgttccatacccatgttttgagattggaaaaaaccca 17146156  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  17146155 tacccatacc 17146146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 44172609 - 44172698
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||||||||| ||  |||||||| ||  |||| |||||||| |||||    
T  44172609 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcgg 44172698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 44179309 - 44179398
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||||||||| ||  |||||||| ||  |||| |||||||| |||||    
T  44179309 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcgg 44179398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 34154398 - 34154486
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||| | ||||||| || |||||||||||||||| |||| ||||| | | ||||||||| |  |||||||||||||||||||    
T  34154398 ttttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcgg 34154486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 29842291 - 29842385
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaa 196  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||| ||||| ||  ||||| || ||  |||| |||||| ||||||| ||||    
T  29842291 attttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatcgggaaaa 29842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 34119654 - 34119762
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagt 216  Q
    ||||| |||| |||||||||||||||| |||| ||||| ||| ||| ||||  |  |||| |||||| ||||||| |||||||||||| |||||| ||      
T  34119654 gacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaac 34119753  T
Q  217 ccaatcaaa 225  Q
    |||||||||    
T  34119754 ccaatcaaa 34119762  T

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Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 39728654 - 39728706
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | |||||||||| |||||||||||||||| ||||||||||    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatat 39728706  T

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Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 44953539 - 44953451
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||| | |||||||||||||||| |||||||||| |||| ||||| ||  |||||||| ||  |||| |||||||| |||||    
T  44953539 ttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcgg 44953451  T

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Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 19111733 - 19111840
Alignment:
Q  118 acgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtc 217  Q
    ||||||||| | |||||||  ||||| |||||||||| ||  ||| || | ||| |||| |||||||||||||| |||||||||||| |||||| ||  |    
T  19111733 acgggtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacc 19111832  T
Q  218 caatcaaa 225  Q
    ||||||||    
T  19111833 caatcaaa 19111840  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 4553107 - 4553141
Alignment:
Q  37 ctaagactttgattgtatgagtgaaatgggtttga 71  Q
    |||||||||||||||||||||||||||||||||||    
T  4553107 ctaagactttgattgtatgagtgaaatgggtttga 4553141  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 293
Target Start/End: Original strand, 29284320 - 29284510
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||  | |||||||||| ||||||||||||| || |||| ||||| ||  |||||||| ||  |||| ||||| || ||||| |||||| ||     
T  29284320 ttttttacatctgggacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccat 29284419  T
Q  203 acacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgccatg 293  Q
    || |||||| ||  ||| ||||| ||||||||| || | || ||| || |||||  || ||||| ||| |||| |||  ||||||||||||    
T  29284420 acccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 29284510  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 49025664 - 49025765
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||||||| |||||||||| || ||||||| ||||| ||| |||||||| ||  |||| |||||||| |||||  ||||| ||    
T  49025664 attttttacatttgggacgggtttgggtatgggttc-ggatgtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccca 49025762  T
Q  202 aac 204  Q
    |||    
T  49025763 aac 49025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 4016141 - 4016040
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    |||||| |||| ||||| |||||||||||| ||| |||| ||||| ||  ||| |||| ||  |||||||||||||||||||  ||||| ||||| ||||    
T  4016141 cattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccata 4016042  T
Q  210 cc 211  Q
    ||    
T  4016041 cc 4016040  T

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Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 10043387 - 10043254
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||| ||||| || |||| || |||||||||||||||| || | |||| |||  |||||||| ||  ||||||||||||||| | |  ||||| ||    
T  10043387 attttttatattcgggatgggtatgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaaccca 10043288  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaa 235  Q
    ||| |||||| ||  ||| |||||| ||||||||    
T  10043287 aacccatacccaaacccagtcaaagtggagaaaa 10043254  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 49580047 - 49580136
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||||||||||||||||||||| |||| |||| ||||| |   |||||||| ||  |||| |||||||| |||||    
T  49580047 attttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcgg 49580136  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 52198138 - 52198247
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| |  ||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||  |||||||| ||||| |||||| ||    
T  52198138 attttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaaccca 52198237  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  52198238 tacccatacc 52198247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 3385968 - 3385828
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||| |||||||||||||| |  ||||||||  |||||| |||| ||||  ||| |||||||   ||||| || ||| |||| ||||||||||| || ||    
T  3385968 taaaatgattttttacattaggtacgggttttggtatggattcgtggtggctacctatatcctcgttacctgtcccgtacccgtgttttgaaatgggtaa 3385869  T
Q  195 aaactcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
    ||| |||||  |||||||||  ||| ||||||||| |||||    
T  3385868 aaattcaaatccatacctaaacccagtcaaagcggggaaaa 3385828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 44106897 - 44106857
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggt 142  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  44106897 attttttacatttgggacgggtttgagtatgggttcggggt 44106857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 48390922 - 48390786
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||||||| |||| ||||||| || |||||||||| || || |||| ||||| ||  |||||||| ||  |||| ||||||||||||||  ||||| ||    
T  48390922 attttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 48390823  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaatcc 238  Q
     || |||||| ||  ||| ||||| ||| ||||||||    
T  48390822 tacccatacccaaacccagtcaaaacggggaaaatcc 48390786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 42758367 - 42758446
Alignment:
Q  112 ttcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||| |||||||||| ||||||||||||||||  ||| ||||| ||| |||||||| ||  |||  ||||||||||||||    
T  42758367 ttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgg 42758446  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 44639257 - 44639340
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttga 185  Q
    |||||||||||| |  ||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||||||    
T  44639257 attttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 44639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 7469880 - 7469818
Alignment:
Q  105 ttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  7469880 ttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgt 7469818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 20086992 - 20087056
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||||||| | ||||||| |||||| |||||||||||| |||| ||||| || |||||||||    
T  20086992 attttttacatttgggacgggtatgagta-gggttcggggtgggtacctatatacccattacccgt 20087056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 52572592 - 52572701
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||| |||||||||| ||||||||| || | ||||| ||  |||||||| ||  |||| |||||||| ||||   ||||||||    
T  52572592 attttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactca 52572691  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  52572692 tacccatacc 52572701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 53631887 - 53631952
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||| || ||||| |||| |||||||||||||||||||||| |||| ||||| ||  ||||||||    
T  53631887 attttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgt 53631952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 4557389 - 4557301
Alignment:
Q  123 tttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    |||| |||||||||||||||| |||| ||||| |   |||||||| ||  ||||||||||||||| |||  ||||| ||||| ||||||    
T  4557389 tttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacc 4557301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 23547046 - 23546982
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||| ||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  23547046 ttttttacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgt 23546982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 31271347 - 31271307
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccc 157  Q
    |||||||||||||||| |||||||||| |||| ||||||||    
T  31271347 gacgggtttgagtatgagttcggggtgggtacctatatccc 31271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 44252731 - 44252791
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattac 163  Q
    ||||||| ||| | |||||||||| |||||||||||||||| |||| ||||| ||| ||||    
T  44252731 ttttttatatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttac 44252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 16311409 - 16311272
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||||||  ||||||||||| ||||||| ||||||||||||||| |||| ||||||||| ||| ||||  || || | ||||||||||||||    
T  16311409 taataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgttttgaaatcgg 16311310  T
Q  192 aaaaaactcaaacacatacctaagtccaatcaaagcgg 229  Q
    ||||||||||||| |||| | ||  |||||||||||||    
T  16311309 aaaaaactcaaactcatatccaaacccaatcaaagcgg 16311272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 38972895 - 38973038
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| | |||| |||| |||||||||||||||||||||||| |||| ||||| ||  |||||  | ||  |||||||||||||||||||    
T  38972895 taataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgg 38972994  T
Q  192 aaaaaactcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
     |||||| ||||| |||||||||  ||| ||||| ||| |||||    
T  38972995 gaaaaacccaaactcatacctaaacccagtcaaaacggggaaaa 38973038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 17153142 - 17153254
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||| ||| || |||| ||||||    ||| |||| ||| ||||||||||| |||||||    
T  17153142 taataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaaatcgg 17153241  T
Q  192 aaaaaactcaaac 204  Q
    |||||||||||||    
T  17153242 aaaaaactcaaac 17153254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 27900516 - 27900405
Alignment:
Q  93 aataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgga 192  Q
    |||||||||||||| |||||||| | ||| |||| ||||||||||| | || |||| |||||||  ||||||||| ||  |||||||||||||||||||     
T  27900516 aataaattgattttatacattcggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcggg 27900417  T
Q  193 aaaaactcaaac 204  Q
    ||||||||||||    
T  27900416 aaaaactcaaac 27900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 12866657 - 12866548
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||| || ||||||||||| |||| |||| ||||| ||| |||||||| ||  |||||||||||||||||||| ||||||||    
T  12866657 attttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactca 12866558  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  12866557 tacccatacc 12866548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 6810132 - 6810243
Alignment:
Q  93 aataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgga 192  Q
    ||||||||||||||   |||||| || ||||||| |||||||||||||||| ||||||||||||   |||||||||||| |||| |||| | |||||||     
T  6810132 aataaattgattttcaccattcgggatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggg 6810231  T
Q  193 aaaaactcaaac 204  Q
     ||||| |||||    
T  6810232 gaaaacccaaac 6810243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 12834688 - 12834571
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    ||||||| |||||||||||| | ||||||| || |||||||||||||||  |||| ||||| ||| |||||||| ||  | |||||||||||||| |||     
T  12834688 ataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggag 12834589  T
Q  194 aaaactcaaacacatacc 211  Q
    ||||| || || ||||||    
T  12834588 aaaacccatacccatacc 12834571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 294
Target Start/End: Original strand, 39422324 - 39422521
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgta-cttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    |||| |||||||||||||||||| ||||||||||| |||| ||||| ||||| ||| |||||||||      ||| | ||  |||| |||||||||||||    
T  39422324 taatgaattgattttttacattcaagacgggtttgggtataggttcagggtgggtaccttatatcc------cccttcccatacccgtgttttgaaatcg 39422417  T
Q  191 gaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgcc 290  Q
      |||||| ||||| |||| | ||  ||||||||||||| ||||| |  | |||||| ||||||||  || || ||||||  ||| ||| ||||||||||    
T  39422418 agaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtggttcgggcggttacccacaggtatgagctttgttgcc 39422517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 5908794 - 5908671
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||||||| ||||||||| ||||||||||| ||||| ||  |||||||| ||  |||| ||||| || |||||  ||||||||    
T  5908794 attttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactca 5908695  T
Q  202 aacacatacctaagtccaatcaaa 225  Q
     || |||||| ||  |||||||||    
T  5908694 tacccatacccaaacccaatcaaa 5908671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 7350523 - 7350448
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||| ||||| |||||| ||||||||||| |||||||||||||||||  | | |||||||| |||||||||    
T  7350523 taataaattaattttctacatttgagacgggtttaagtatgggttcggggtggatgcctatatccccattacccgt 7350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 35311805 - 35311895
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgga 192  Q
    |||||||||||| | ||||||| ||||||||||||||| ||| |||| |||||  || |||||||| ||  |||| |||||||||||||||    
T  35311805 attttttacatttgggacgggtatgagtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaatcgga 35311895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 8020591 - 8020696
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||||| |||||||   ||||||||| ||||| ||||| | || |||| ||||||||| |||||| ||| | |||| ||||||||||||||  |    
T  8020591 taaattgattttctacattcagaacgggtttgcgtatgagttcgagatgagtacctatatccctgttacccattcagtacccgtgttttgaaatcgggga 8020690  T
Q  195 aaactc 200  Q
    ||||||    
T  8020691 aaactc 8020696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 15890190 - 15890296
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||| || |||||||||| ||||| |||| ||||| ||  |||||||| ||  |||| ||||||||||||||| ||||| ||    
T  15890190 attttttacatttgggacgggtatgggtatgggttc-gggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaaccca 15890288  T
Q  202 aacacata 209  Q
     |||||||    
T  15890289 tacacata 15890296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 18452001 - 18451938
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatc 155  Q
    ||||||||||||||| |||| ||| |||| |||||| |||| |||||||||| |||||||||||    
T  18452001 taataaattgattttctacaatcgggacgagtttgattatgagttcggggtgggtacttatatc 18451938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 2985130 - 2985232
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||| || ||||||||| | |||| |||||| |||||| || |||| ||||| ||  |||||||| ||  |||||||| ||||||||||| ||||||||    
T  2985130 attttctatattcgagacagatttgggtatggtttcgggatgagtacctatatacccgttacccgtcccaaacccatgtcttgaaatcggagaaaactca 2985229  T
Q  202 aac 204  Q
    |||    
T  2985230 aac 2985232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 4920809 - 4920898
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||||||||| ||||||||||||||||  ||| ||||| ||  |||||||| ||  |||| |||||||| |||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcgg 4920898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 27088458 - 27088417
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtg 143  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  27088458 attttctacattcgagacgggtttgggtatgggttcggggtg 27088417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 29664947 - 29665044
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgga 192  Q
    |||||||||||| |||||||| |||||||||| ||||| |||||  ||| |||| ||||||||  |||||| |   | |||| |||||||||||||||    
T  29664947 taaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatcgga 29665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 10127064 - 10127116
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| |||||    
T  10127064 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatat 10127116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 12773909 - 12773825
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||||||||||||||| |||| |||| |||||| |  ||| |||| ||| |||| | ||||||||||||| ||||| |||||    
T  12773909 gggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaac 12773825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 32575054 - 32574942
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| || |||||||| | |||||||| || |||||||||| || |||| ||||||| | |||||| | ||| | |  ||||||||||||||    
T  32575054 taataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctgtgttttgaaatcgg 32574955  T
Q  192 aaaaaactcaaac 204  Q
      ||||| |||||    
T  32574954 ggaaaacccaaac 32574942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 12457490 - 12457537
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcgg 139  Q
    ||||||||||||||| |||||||| |||||||||| ||||| ||||||    
T  12457490 taataaattgattttctacattcgggacgggtttgggtatgagttcgg 12457537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 22695007 - 22694961
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtac 148  Q
    |||||||||||| | |||||||||| |||||||||||||||| ||||    
T  22695007 attttttacatttgggacgggtttgggtatgggttcggggtgggtac 22694961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 4583102 - 4583191
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | ||||||| || ||||||||| |||||| | || ||||| ||  |||||||| ||  |||| ||||||||||||||    
T  4583102 attttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcgg 4583191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 6092624 - 6092559
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||||||| | ||||| |||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  6092624 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 29246057 - 29245948
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | || |||| || ||||||||| |||||| |||| ||||| | | |||  ||| ||  |||| ||||||||||||||| ||||||||    
T  29246057 attttttacatttgggatgggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactca 29245958  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  29245957 tacccatacc 29245948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 35194095 - 35194030
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||| |||||||| |||||||||||||||| ||| |||||| |||| ||||| ||  ||||||||    
T  35194095 attttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgt 35194030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 40517789 - 40517830
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtg 143  Q
    ||||||||| || | |||||||||||||||||||||||||||    
T  40517789 attttttacctttgggacgggtttgagtatgggttcggggtg 40517830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 2681217 - 2681301
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||| ||||||||||||||||  |||| ||||||| ||||||| | ||| |||  | ||||||||||||  ||||| |||||    
T  2681217 gggtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaac 2681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 12712645 - 12712561
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||| ||||||||||| |||| |||| |||||| |  ||| |||| ||| |||| | ||||||||||||| ||||| |||||    
T  12712645 gggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaac 12712561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 20634186 - 20634230
Alignment:
Q  123 tttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||| |||||||||||||||| || | ||||||||||||||||||    
T  20634186 tttgggtatgggttcggggtgagtgcatatatccctattacccgt 20634230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 20650300 - 20650344
Alignment:
Q  123 tttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||| |||||||||||||||| || | ||||||||||||||||||    
T  20650300 tttgggtatgggttcggggtgagtgcatatatccctattacccgt 20650344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 28569106 - 28569038
Alignment:
Q  123 tttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||| |||||||||||||||| |||| ||||||||  |||||||| ||| ||||   ||||||||||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcgg 28569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 38006583 - 38006523
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    ||||||| |||||  ||||||| ||||| |||| |||||||||||||||| |||| |||||    
T  38006583 ataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatat 38006523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 42987585 - 42987533
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | |||||||||| ||||||||||||| || |||| |||||    
T  42987585 attttttacatttgggacgggtttgggtatgggttcgggatgggtacctatat 42987533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 256
Target Start/End: Complemental strand, 256604 - 256443
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||||| ||||||   || ||||||| ||||||||| |||||| |||| ||||| || |||||||||  || |||||||||||||||||||  |    
T  256604 taaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcgggga 256505  T
Q  195 aaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtt 256  Q
    |||||||||| |||||| ||   ||| |||||||| |||||||||| || |||||| |||||    
T  256504 aaactcaaactcatacccaaacacaaccaaagcggggaaaatccattaaattgagtttggtt 256443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 32532523 - 32532612
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | ||||||| ||||||||||||||||||| |||| ||||| || ||||||||| ||  |||| ||||||||||||||    
T  32532523 attttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcgg 32532612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 9402565 - 9402660
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||   || ||||||| | |||||||| | | |||||||||||||||||||    
T  9402565 taaattgattttctacattcgagacaggtttgagtatgggttc-gggtggacacctatatccatgttacccgtcctgtacccatgttttgaaatcgg 9402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 27738755 - 27738867
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| |||||  || |||||||| ||  |||| ||||||||||||||  ||||| ||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T
Q  202 aacacatacctaa 214  Q
     || |||||||||    
T  27738855 tacccatacctaa 27738867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 28079780 - 28079692
Alignment:
Q  123 tttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    |||| |||||||||||||||| |||| ||||||||  |||||||| ||| |||||||||||||||||||  ||||| ||||| ||||||    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacc 28079692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 12309555 - 12309642
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatc 189  Q
    |||||||||||| | |||||||||| |||| ||||||||||| |||| ||||| ||| |||||||||||  |||| ||||||||||||    
T  12309555 attttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatc 12309642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 228
Target Start/End: Original strand, 13769045 - 13769181
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| |||||||  ||||||||||  ||||||||| ||||| |||| |||||  |  |||||||| ||  |||||||||||||| ||||    
T  13769045 taataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcgg 13769144  T
Q  192 aaaaaactcaaacacatacctaagtccaatcaaagcg 228  Q
      |||||  |||| |||||||||  ||| ||||||||    
T  13769145 ggaaaaccgaaacccatacctaaacccagtcaaagcg 13769181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 32959834 - 32959929
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaat 188  Q
    ||||||||||||||| ||||||   ||||| |||| ||||||||||||||||  ||| ||||||||  |||||||||||| |||| |||||||||||    
T  32959834 taataaattgattttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaat 32959929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 2367309 - 2367398
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||| |||| | |||||||||| |||||||||||||||| |||||||||| ||  |||||||| ||  |||| |||||||| |||||    
T  2367309 attttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcgg 2367398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 256
Target Start/End: Original strand, 27534668 - 27534821
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| |||||| ||||||||| |||| ||||| ||  |||||||| ||  |||| ||||| || |||||  ||||||||     
T  27534668 ttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcat 27534767  T
Q  203 acacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtt 256  Q
    || |||||| ||  ||||||||| ||| ||||| || | || |||||| |||||    
T  27534768 acccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggtt 27534821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 32853827 - 32853916
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| |||||||| |||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcgg 32853916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 14410945 - 14410858
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    |||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| |||||||||||| |  |||||||||||    
T  14410945 gacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 20349037 - 20349136
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||| |||||||||||| |  |||| |||| ||||| |||||||||| |||| ||||||||  |||| ||| ||  |||| ||||||||||||||    
T  20349037 taataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcgg 20349136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 24602961 - 24602874
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatc 189  Q
    ||||| |||||||| || ||||||| |||||||||||||||| |||  ||||| ||| ||||||||  |  |||||||||||||||||    
T  24602961 attttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatc 24602874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 16405505 - 16405408
Alignment:
Q  112 ttcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    |||| |||||||||||||||| |||| |||||||||| |||||| ||  |||  |||||| | || |||||||||||  | |||||||||||| ||||    
T  16405505 ttcgggacgggtttgagtatgagttcagggtgtgtacatatatctctggtacttgttccgtatccgtgttttgaaattcggaaaaactcaaacccata 16405408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 3484027 - 3483919
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||||| | ||  |||| ||||| || |||||  ||||| ||     
T  3484027 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccat 3483928  T
Q  203 acacatacc 211  Q
    |||||||||    
T  3483927 acacatacc 3483919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 5863487 - 5863399
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||| | |||||||||| ||||||||||| |||| |||  ||||| ||  |||||||| ||  |||| ||||||||||||||    
T  5863487 ttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcgg 5863399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 8320910 - 8320814
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaat 188  Q
    |||||| |||||||||| |||||   |||||| || |||||||||||||||   ||  ||||||||| ||||| |||||| |||| |||||||||||    
T  8320910 taataagttgattttttgcattcagaacgggtctgggtatgggttcggggtcgatatctatatccctgttacctgttccgtacccgtgttttgaaat 8320814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 10925558 - 10925458
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||  |||||||||||||  | | ||||  ||||||||||||||||  |||||||||| | ||||||| |  || ||||||||||||||| |||    
T  10925558 taataaattatttttttacattcggaatgagtttaggtatgggttcggggtggatacttatatctccattacccatctcgtacccatgttttgaaaacgg 10925459  T
Q  192 a 192  Q
    |    
T  10925458 a 10925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 12141368 - 12141420
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| |||||    
T  12141368 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatat 12141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 32053072 - 32053160
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||   |||||||||| ||||||||| |||||| |||| ||||| ||  |||||||| ||  | |||||||||||||||||    
T  32053072 ttttttacattttggacgggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcgg 32053160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 24225681 - 24225746
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||||||| | |||||||||| | |||||||||||||| |||| ||||| ||  ||||||||    
T  24225681 attttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgt 24225746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 29199970 - 29199901
Alignment:
Q  122 gtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||| |||||||||||||||   ||| ||||||||| |||||||| ||| |||| | ||||||||||||    
T  29199970 gtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcgg 29199901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 10188178 - 10188126
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | || ||||||| |||||||||||||||| |||| |||||    
T  10188178 attttttacatttgggatgggtttgggtatgggttcggggtgggtacctatat 10188126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 29918580 - 29918699
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||||||||||||| | |||||||||| |||||| ||||||||| |||| ||||||  | |||||||||| | ||   ||||||||||||||    
T  29918580 taataaattgattttttacatttgggacgggtttgtgtatggtttcggggtgggtacatatatctttgttacccgttctgtacatgtgttttgaaatcgg 29918679  T
Q  192 aaaaaactcaaacacatacc 211  Q
     |||||||||||| ||||||    
T  29918680 gaaaaactcaaactcatacc 29918699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 257
Target Start/End: Complemental strand, 8545461 - 8545300
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||||| |||  ||||||||  |||| ||||||  |||| ||||||||||||||| |    
T  8545461 taaattgattttctacatttgggacgagtttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggaga 8545362  T
Q  195 aaactcaaacacatacctaagtccaa-tcaaagcggagaaaatccataaatttgagtgtggttt 257  Q
    |||| |||||  ||||| || ||||| | ||||||||||||| || | ||||||||| ||||||    
T  8545361 aaacccaaacttatacccaa-tccaagttaaagcggagaaaa-ccgtcaatttgagtttggttt 8545300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 27777283 - 27777170
Alignment:
Q  122 gtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtccaat 221  Q
    ||||| |||||||||||||||| |||| | |||| || ||||| || ||| |||  |||||||||||||| ||||||||||||||||||| ||  ||| |    
T  27777283 gtttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagt 27777184  T
Q  222 caaagcggagaaaa 235  Q
    |||| |||||||||    
T  27777183 caaaacggagaaaa 27777170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 30904019 - 30904117
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    ||||||||||||||| |||||||| ||| | |||| ||||||||  |||||| ||||||||||| | |||||||||  || |||| |||||||||||||    
T  30904019 taataaattgattttctacattcgggactgatttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgttttgaaatcg 30904117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 20399575 - 20399684
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||||| |||||| |||||||||| | |||||||||||||| |||  ||||| ||  |||||||| ||  |||| ||||||||||||||| ||||| ||    
T  20399575 attttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaaccca 20399674  T
Q  202 aacacatacc 211  Q
    ||| ||||||    
T  20399675 aacccatacc 20399684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 29108927 - 29108818
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||| || |||||||||||||||| |||| ||||| ||  |||||||| ||  ||||||||||| ||||||| |||||| ||    
T  29108927 attttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaaccca 29108828  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  29108827 tacccatacc 29108818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 39379694 - 39379591
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||  |||||||| |||| ||||||||||| |||| ||||| |||||| |||||  ||||||||| ||| |||| |||||||| |||||    
T  39379694 taataaattgatttactacattcgggacgagtttgagtatgagttc-gggtgggtacttttatcctcattacccgtcccgtacccgtgttttgagatcgg 39379596  T
Q  192 aaaaa 196  Q
     ||||    
T  39379595 gaaaa 39379591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 210
Target Start/End: Original strand, 45236040 - 45236156
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    ||||||| |||||||||||| | ||||||| ||  ||||||||||||||| |||| ||||| || ||||||||| ||  |||| |||||||||||| |      
T  45236040 ataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcaggg 45236139  T
Q  194 aaaactcaaacacatac 210  Q
    |||||||| || |||||    
T  45236140 aaaactcatacccatac 45236156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 30481533 - 30481382
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||| |||||||||||||| |||| ||||| |||||||||||||||| |||| |||||||  ||||| |||  |  || | | |||||||||| | ||    
T  30481533 taaattaattttttacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaa 30481434  T
Q  195 aaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaattt 246  Q
    |||| ||||| |||||  ||  ||||||||| | | |||||||||| |||||    
T  30481433 aaacccaaactcatactcaaacccaatcaaaacagggaaaatccatcaattt 30481382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 36275018 - 36275081
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccct 158  Q
    ||||||||||||||||||||| |||  ||||  |||||||||||||||| ||||||||||||||    
T  36275018 taaattgattttttacattcgggacatgtttaggtatgggttcggggtgagtacttatatccct 36275081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 15173966 - 15173876
Alignment:
Q  121 ggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    |||||||||||| ||||| ||||  ||| |||||| |  |||||||| ||| |||| | |||||||||||| |||||||||||||||||||    
T  15173966 ggtttgagtatgagttcgaggtggatacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacc 15173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 17108349 - 17108422
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattaccc 165  Q
    |||||||||||||||||||| ||| || | ||||| ||||  ||||| |||||||||||||||||| |||||||    
T  17108349 taataaattgattttttacaatcgggatgagtttgggtataagttcgaggtgtgtacttatatcccgattaccc 17108422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 1012603 - 1012710
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    |||||| |||||| |||| ||||| |||||||||||||||| |||| ||||| || ||||||||| ||  || |||||||| |||||||  ||||| |||    
T  1012603 ttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcggggaaaacccaa 1012701  T
Q  203 acacatacc 211  Q
    || ||||||    
T  1012702 actcatacc 1012710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 43113723 - 43113635
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaac 198  Q
    |||||||||||| |||| ||||| |||||||||| |||| ||||| ||| |||||||| ||   ||| |||||||||||||| ||||||    
T  43113723 cattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaac 43113635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 14186295 - 14186405
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    ||||||| ||||| |||||||  |||||||||| |||||||||| ||||| |||| |||||  |  |||||| | ||  |||| |||||||||||||  |    
T  14186295 ataaattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgaga 14186394  T
Q  194 aaaactcaaac 204  Q
    |||||||||||    
T  14186395 aaaactcaaac 14186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 37961052 - 37960958
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    |||||||||| ||||| ||||||||||||||| ||||| ||| ||||| || ||  |||| |||||| |||||||  ||||| ||||| ||||||    
T  37961052 gacgggtttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacc 37960958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 17084223 - 17084111
Alignment:
Q  93 aataaattgatttttt--acattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    ||||||||||||||||  ||||||| || |||||||  |||| |||||||||| |||  ||||||||  ||||||||  || |||| |||||| ||||||    
T  17084223 aataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggtatctatatccccgttacccgtctcgtacccgtgttttaaaatcg 17084124  T
Q  191 gaaaaaactcaaa 203  Q
    || ||||| ||||    
T  17084123 gagaaaacccaaa 17084111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 27932396 - 27932485
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | ||||| | ||||||||||||||||||| |||| ||||| ||  |||| ||| ||  |||| ||||||||||||||    
T  27932396 attttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcgg 27932485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 24927933 - 24927997
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 24927997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 32303045 - 32303109
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  32303045 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 32303109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 34777049 - 34777145
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaac 198  Q
    |||||||||||| | || || |||| |||||||||||||||| |||| || || ||| |||| ||||||  |||| |||||||| ||||| ||||||    
T  34777049 attttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgggaaaaac 34777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 204
Target Start/End: Original strand, 17469253 - 17469340
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    |||||||||| ||||||||| |||||| |||| ||||| ||  |||||||| ||  |||| ||||||||||||||  ||||| |||||    
T  17469253 gacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 17469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 24568929 - 24569044
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    |||||| ||||| |||||||||||||||||||||  ||| ||||| ||   |||| || ||  ||||||||| ||||||||| |||||  || || ||||    
T  24568929 cattcgggacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcgggaaaaatccatacccata 24569028  T
Q  210 cctaagtccaatcaaa 225  Q
    |||||  |||||||||    
T  24569029 cctaaacccaatcaaa 24569044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 2183693 - 2183599
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaa 214  Q
    ||||||||||||| |||||||||| |||| |||||| | ||||||  |  || |||| | ||||||||||||| ||||  ||||| |||||||||    
T  2183693 gggtttgagtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaatccaaactcatacctaa 2183599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 9642456 - 9642354
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||| |||||||||||||||| ||  ||  |||| |||  |||||||| ||  |||| ||||||||||||||  ||||| ||    
T  9642456 attttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 9642357  T
Q  202 aac 204  Q
    |||    
T  9642356 aac 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 39445681 - 39445527
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||| || ||||| |||||||||| |||| ||||  ||  ||||| || ||  |||| |||||||||||||| |||||| ||    
T  39445681 attttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 39445582  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtt 256  Q
     || |||||| ||  | | ||||| ||| |||||||| | || |||||| |||||    
T  39445581 tacccatacccaaacctagtcaaaacggggaaaatccgtcaaattgagtttggtt 39445527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 1063490 - 1063599
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||| | | || || |||| ||||| |||||||||| |||||||||| ||  ||| |||| ||  |||| |||||||||||||| |||||| ||    
T  1063490 attttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaaccca 1063589  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  1063590 tacccatacc 1063599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 9476128 - 9476063
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccc 157  Q
    |||||| || ||||| |||||||| || ||||||| ||||||||||| |||| ||| |||||||||    
T  9476128 taataatttaattttctacattcgggatgggtttgggtatgggttcgaggtgggtatttatatccc 9476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 14687378 - 14687515
Alignment:
Q  98 attgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaa 197  Q
    |||||||||  ||||||  |||| ||||| ||||||||||||||||  ||| ||||||||| || | ||| ||  |||  ||||||||||||||  ||||    
T  14687378 attgattttccacattcaggacgagtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaa 14687477  T
Q  198 ctcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
    | ||||  |||||| ||  |||||||||| || |||||    
T  14687478 cccaaatccatacccaaacccaatcaaagtggggaaaa 14687515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 33631978 - 33631921
Alignment:
Q  128 gtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttga 185  Q
    ||||||||| |||||| ||||||||||||| ||||| ||| ||  |||||||||||||    
T  33631978 gtatgggtttggggtgggtacttatatccccattactcgtcccatacccatgttttga 33631921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 2075868 - 2075748
Alignment:
Q  173 acccatgttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaag 272  Q
    ||||||||||||| ||||| |||||| || || |||||| ||  ||| ||||| |||||||||||| | || ||| || ||||| ||| ||||| ||| |    
T  2075868 acccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaaccacg 2075769  T
Q  273 ggtgtgaactttgttgccatg 293  Q
    | | |||  ||||||||||||    
T  2075768 gatatgagttttgttgccatg 2075748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 12075747 - 12075609
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| |||||||  |||| ||||||||| | ||| |||||| |||| ||| ||||||||||| ||  || |||| ||||||||||| ||    
T  12075747 taataaattgattttctacattccggacgagtttgagtacgagtttggggtgggtacatatctccctattacctgtcacgtacccgtgttttgaaattgg 12075648  T
Q  192 aaaaaactcaaacacatacctaagtccaatcaaagcgga 230  Q
    ||||||||||||| |||||| ||  || |||||||||||    
T  12075647 aaaaaactcaaactcatacccaaacccgatcaaagcgga 12075609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 21956930 - 21956801
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| ||||||||  ||| ||||| |||||||||||||||| | || ||||||||  |||| | ||||| |||| |||||| |||||||    
T  21956930 taataaattgattttctacattcgtaacgagtttgggtatgggttcggggtgggcacctatatccccgttactcattccgtacccgtgttttaaaatcgg 21956831  T
Q  192 aaaaaactcaaacacatacctaagtccaat 221  Q
    ||||||| ||||| |||||| || ||||||    
T  21956830 aaaaaacccaaactcatacccaaatccaat 21956801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 267
Target Start/End: Original strand, 25941119 - 25941292
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    ||||||||||||| ||||| ||||||  ||||| |||||||||||||||| |||| ||| | ||  ||||| || ||| |||| |||||||||||||| |    
T  25941119 ataaattgattttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcggga 25941218  T
Q  194 aaaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtac 267  Q
    ||||| ||||||||| || ||  | |||||||| || ||||| |||| || |||||| | ||| || |||||||    
T  25941219 aaaacccaaacacatgcccaaaccaaatcaaagtggggaaaacccattaaattgagtttagttcagatgggtac 25941292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 33516188 - 33516115
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattaccc 165  Q
    ||||| |||||||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  33516188 taatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtacttatatccctgttaccc 33516115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 39086189 - 39086301
Alignment:
Q  145 gtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaat 244  Q
    |||| ||||||||  |||||||| ||||||||||||| |||||||||| ||||||||||| |||| | ||  ||||||||| |||||||||||| | ||     
T  39086189 gtacctatatccccgttacccgtaccgcacccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaaa 39086288  T
Q  245 ttgagtgtggttt 257  Q
    |||||| ||||||    
T  39086289 ttgagtttggttt 39086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 103 - 293
Target Start/End: Complemental strand, 11122974 - 11122784
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||| || |||||| ||||| ||     
T  11122974 ttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccat 11122875  T
Q  203 acacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgccatg 293  Q
    || |||||| ||   || ||||| |||| ||||||| | || |||||| |||||  || ||||| ||| |||| |||  ||||||||||||    
T  11122874 acccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 11122784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 42907868 - 42907974
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||||| |||||||| |||| ||||| ||||||| |||||||| |||| |||||||| ||||| ||| ||| | || ||||||||| ||||| |    
T  42907868 taaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtacctatatccccattactcgtcccgtatccgtgttttgaattcggaga 42907967  T
Q  195 aaactca 201  Q
    |||||||    
T  42907968 aaactca 42907974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 4741331 - 4741215
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||||| | |||||||  ||||||||  |||||||||||||||| |||||||||||||| ||| |||| ||  ||||||||||| ||||||     
T  4741331 taataaattgatttat-acattcggaacgggtttttgtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcga 4741233  T
Q  192 aaaaaactcaaacacata 209  Q
      ||||||||||| ||||    
T  4741232 ggaaaactcaaactcata 4741215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 48459470 - 48459559
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | || |||| || |||||||||||||||| |||| ||||| ||| |||||||||||  |||||||||||||||||||    
T  48459470 attttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcgg 48459559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 6382377 - 6382245
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| |||||||| |||||| ||||| ||     
T  6382377 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccat 6382278  T
Q  203 acacatacctaagtccaatcaaagcggagaaaa 235  Q
    || |||||| ||  ||| ||||||||| |||||    
T  6382277 acccatacccaaacccagtcaaagcggggaaaa 6382245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 47550459 - 47550360
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||| |||||||| ||  |||| |||||||| |||||  ||||||||    
T  47550459 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactca 47550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 1724408 - 1724307
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    |||||| |||||||||| |||||||||||||||| |||| |||||  |  |||||||| ||  |||||||||||||||||||  ||||| ||||| ||||    
T  1724408 cattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaaacccata 1724309  T
Q  210 cc 211  Q
    ||    
T  1724308 cc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 14606011 - 14605922
Alignment:
Q  122 gtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    ||||| |||||||||||||||| |||| ||||||||| ||||||||  || |||| | ||||||||||||| ||||| ||||| ||||||    
T  14606011 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacc 14605922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 19883169 - 19883035
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||||| |||||||| |||| ||||| |||| |||||||||||  ||| ||||||||  |||||| | ||| | || |||||| |||||||  |    
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  195 aaactcaaacacatacctaagtccaatcaaagcgg 229  Q
    |||| ||||| |||||  ||  |||||||||||||    
T  19883069 aaacccaaactcatactcaaacccaatcaaagcgg 19883035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 8843920 - 8843804
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||| ||||| |||||||  |||||||||| ||||| ||||||| || |||  ||||||||   ||||||| |||||||  |||||| |||||||    
T  8843920 taataaattaattttctacattcacgacgggtttgggtatgagttcggg-tgggtatctatatccccgctacccgtcccgcacctgtgttttaaaatcgg 8843822  T
Q  192 aaaaaactcaaacacata 209  Q
     ||||| |||||||||||    
T  8843821 gaaaaattcaaacacata 8843804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 8856884 - 8856768
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||| ||||| |||||||  |||||||||| ||||| ||||||| || |||  ||||||||   ||||||| |||||||  |||||| |||||||    
T  8856884 taataaattaattttctacattcacgacgggtttgggtatgagttcggg-tgggtatctatatccccgctacccgtcccgcacctgtgttttaaaatcgg 8856786  T
Q  192 aaaaaactcaaacacata 209  Q
     ||||| |||||||||||    
T  8856785 gaaaaattcaaacacata 8856768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 21544586 - 21544663
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaa 197  Q
    ||||||| |||||||||||||||| |||| |||||||| |||||| || ||| |||| | |||||||||||| |||||    
T  21544586 gggtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaa 21544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 7608960 - 7609092
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||| || |||||  ||||| ||     
T  7608960 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 7609059  T
Q  203 acacatacctaagtccaatcaaagcggagaaaa 235  Q
    || |||||| || |||| ||||| ||| |||||    
T  7609060 acccatacccaaatccagtcaaaacggggaaaa 7609092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 11028063 - 11028195
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | ||| |||||| ||||| |||||||||| |||| ||||| ||  |||||||| ||  |||| |||||||| |||||  ||||| ||     
T  11028063 ttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 11028162  T
Q  203 acacatacctaagtccaatcaaagcggagaaaa 235  Q
    || |||||| || |||| ||||| |||||||||    
T  11028163 acccatacccaaatccagtcaaaacggagaaaa 11028195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 6482140 - 6482005
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    |||||| |||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||| ||| ||  |||| |||||| |||| ||  ||||| |||    
T  6482140 ttttttgcatttgggacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaa 6482041  T
Q  203 acacatacctaagtccaatcaaagcggagaaaatcc 238  Q
    || |||||| ||  ||||||||| | ||||||||||    
T  6482040 acccatacccaaacccaatcaaaacagagaaaatcc 6482005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 31416019 - 31415904
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtcca 219  Q
    |||||||||| ||||||||||||| |||| ||||||||| ||| || | ||| |||| | ||||||||||||| ||||  |||||  ||||||||  |||    
T  31416019 gggtttgagtgtgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaatcggagaaaatccaaacttatacctaaaccca 31415920  T
Q  220 atcaaagcggagaaaa 235  Q
     ||||| ||| |||||    
T  31415919 gtcaaatcggggaaaa 31415904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 44317525 - 44317660
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||| || |||||  ||||| ||     
T  44317525 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 44317624  T
Q  203 acacatacctaagtccaatcaaagcggagaaaatcc 238  Q
    || |||||| ||  ||| ||||| ||| ||||||||    
T  44317625 acccatacccaaacccagtcaaaacggggaaaatcc 44317660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 12505645 - 12505571
Alignment:
Q  93 aataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| |||||| |||  |||||||||| ||||| |||| ||||| ||||| ||||||| |||||||||    
T  12505645 aataaattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtactaatatccccattacccgt 12505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 13015357 - 13015323
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggtt 136  Q
    |||||||||||||||||||||||||||||||||||    
T  13015357 attttttacattcgagacgggtttgagtatgggtt 13015323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 25298947 - 25298837
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    |||||||||||||  ||||| |  ||||||||| ||||||||||||||||   |  |||||||| ||||||| | ||| |||| |||||||||||| | |    
T  25298947 ataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccgtgttttgaaatccgga 25298848  T
Q  194 aaaactcaaac 204  Q
    ||||| |||||    
T  25298847 aaaacccaaac 25298837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 26564835 - 26564956
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagt 216  Q
    |||||||||| |||||| ||||||||| |||| ||||| ||  |||||||| ||  ||||  |||||||||||||  ||| ||||||| |||||| ||      
T  26564835 gacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaac 26564934  T
Q  217 ccaatcaaagcggagaaaatcc 238  Q
    ||| ||||| || |||||||||    
T  26564935 ccagtcaaaacgaagaaaatcc 26564956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 32585480 - 32585573
Alignment:
Q  104 tttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaa 197  Q
    |||||||||| | |||||||||| |||||||||| ||||| |||| ||||| ||  ||||| || ||  |||| ||||||||||||||| ||||    
T  32585480 tttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcggagaaaa 32585573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 36306764 - 36306869
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| |||||||| ||||||||||||| | | |||||| |  |||| ||||||||  ||| ||||  |  |||| ||||||||||||||    
T  36306764 taataaattgattttctacattcgggacgggtttgagtgtagcttcgggttaggtacctatatccccgttaaccgtctcatacccgtgttttgaaatcgg 36306863  T
Q  192 aaaaaa 197  Q
    | ||||    
T  36306864 agaaaa 36306869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 5902719 - 5902655
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  5902719 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 5902655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 16575091 - 16575155
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatcc 156  Q
    ||||||||| ||||||||||||  ||||| ||||| |||| ||||||| ||| ||||||||||||    
T  16575091 taataaattaattttttacatttaagacgagtttgggtataggttcggagtgggtacttatatcc 16575155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 29527819 - 29527903
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||| |||||||||||||||| |||| ||||||||  ||||||||  || |||| | ||||||||||||  ||||| |||||    
T  29527819 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaac 29527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 1866635 - 1866546
Alignment:
Q  122 gtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    ||||| ||||||||||||||||  ||| |||||||  |||||||||  || |||| | |||||||||||| |||||| || || ||||||    
T  1866635 gtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcatacc 1866546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 15987368 - 15987235
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||| ||| | |||||||||| |||||||||||||||| |||  ||||| ||  |||||| | ||  |||| |||||| ||||| |  ||||||||    
T  15987368 attttttatatttgggacgggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactca 15987269  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaa 235  Q
     || |||||| ||  |||||||||  ||||||||    
T  15987268 tacccatacccaaacccaatcaaaatggagaaaa 15987235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 30266418 - 30266341
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaa 197  Q
    ||||||| ||||||||||||||||  ||| ||||||||  |||||||| | | |||| | || |||||||||||||||    
T  30266418 gggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcggaaaaaa 30266341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 30285770 - 30285847
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaa 197  Q
    ||||||| ||||||||||||||||  ||| ||||||||  |||||||| | | |||| | || |||||||||||||||    
T  30285770 gggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcggaaaaaa 30285847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 568425 - 568469
Alignment:
Q  121 ggtttgagtatgggttcggggtgtgtacttatatccctattaccc 165  Q
    |||||| |||||||||||||||| |||| |||||||| |||||||    
T  568425 ggtttgggtatgggttcggggtgggtacatatatccccattaccc 568469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 21423851 - 21423915
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||||| ||||||||| |||||| |||| ||||| ||  ||||||||    
T  21423851 ttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgt 21423915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 31918663 - 31918623
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtg 143  Q
    ||||||||||| | |||||||||| ||||||||||||||||    
T  31918663 ttttttacatttgggacgggtttgggtatgggttcggggtg 31918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 55826728 - 55826664
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | ||||||||||  ||||||||||||||| |||| ||||| ||  ||||||||    
T  55826728 ttttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgt 55826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 10778671 - 10778539
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| ||||||||| |||||||||||||||||||  ||  |||| |||  |||||||| ||  |||| |||||||||||||| ||||||| ||    
T  10778671 ttttttacatttgagacgggtatgagtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaa 10778572  T
Q  203 acacatacctaagtccaatcaaagcggagaaaa 235  Q
    || |||||| ||  ||| |||||||||| ||||    
T  10778571 actcatacccaaacccagtcaaagcggaaaaaa 10778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 293
Target Start/End: Complemental strand, 24236866 - 24236675
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||| ||||| ||  || ||||||||  |||| |||||||| |||||  ||||| ||    
T  24236866 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaaccca 24236767  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgccatg 293  Q
     || |||||||||  ||| ||||| |||  |||| || | || |||||| |||||  || ||||| ||| |||| |||  ||||||||||||    
T  24236766 tacccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggtatgagttttgttgccatg 24236675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 35069976 - 35069862
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtcca 219  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||   | |||| | || |||||||||  ||||||||||| |||||| || ||||    
T  35069976 gggtttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcatacccaaatcca 35069877  T
Q  220 atcaaagcggagaaa 234  Q
     |||||  |||||||    
T  35069876 gtcaaattggagaaa 35069862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 19572617 - 19572508
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||||| ||||||||||||||||||| |||| ||||| ||  ||||| || ||  |||| |||||||||||||| |||||| ||    
T  19572617 attttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 19572518  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  19572517 tacccatacc 19572508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 29871390 - 29871281
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||| |||||||| |||||||||| ||||| |||| ||||| |||| ||||| ||  ||||| || ||  |||||||||||||||||||| ||||| ||    
T  29871390 attttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaaccca 29871291  T
Q  202 aacacatacc 211  Q
    ||| ||||||    
T  29871290 aactcatacc 29871281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 51421842 - 51421951
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| ||||| | | |||||||| ||  |||| |||||||| ||||| |||||| ||    
T  51421842 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaaccca 51421941  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  51421942 tacccatacc 51421951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 49250877 - 49250745
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| ||||||||||| ||||  ||| ||||| || ||||||||| ||  |||| |||||||| |||||  ||||||||     
T  49250877 ttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcat 49250778  T
Q  203 acacatacctaagtccaatcaaagcggagaaaa 235  Q
    || |||||| ||  ||| ||||| |||||||||    
T  49250777 acccatacccaaacccagtcaaaacggagaaaa 49250745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 5283706 - 5283615
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttga 185  Q
    ||||||||||||| |||| || ||||||||||  ||||| ||||| |||| |||||| |||||| ||||||||| ||| || ||||||||||    
T  5283706 ataaattgattttctacaatccagacgggtttaggtatgagttcgaggtgggtacttctatccccattacccgtcccgtactcatgttttga 5283615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 36421740 - 36421811
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattac 163  Q
    ||||||||||||||| || |||||||||| ||||| ||||  |||||||||| |||| ||||||||||||||    
T  36421740 taataaattgattttctatattcgagacgagtttgggtataagttcggggtgagtacctatatccctattac 36421811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 48125795 - 48125701
Alignment:
Q  95 taaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatc 189  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||||||  ||| |||||||   |||||||| ||| |||| |||||| |||||    
T  48125795 taaattgattttctacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 48125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 16903508 - 16903569
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacc 164  Q
    ||||||||||||| |||||||||| ||||| |||||||||| |||| |||||||| ||||||    
T  16903508 ttttttacattcgggacgggtttgggtatgagttcggggtgggtacctatatccccattacc 16903569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 28297919 - 28298027
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||| || |||||  ||||||||     
T  28297919 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcat 28298018  T
Q  203 acacatacc 211  Q
    || ||||||    
T  28298019 acccatacc 28298027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 33293588 - 33293502
Alignment:
Q  150 tatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaat 236  Q
    |||||||| ||||||||| ||  |||| |||||||||||||| |||||| ||||| |||||| ||  ||||||||| |||| |||||    
T  33293588 tatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaaacggaaaaaat 33293502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 43513142 - 43513104
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatg 132  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  43513142 ataaattgattttttacattcgaaacgggtttgagtatg 43513104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 18354185 - 18354096
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||| || || |||| ||||||||||| | |||||||| ||  |||||||| ||  |||||||||||||||||||    
T  18354185 attttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcgg 18354096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 29936400 - 29936465
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  29936400 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 29936465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 42439775 - 42439666
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | || | |||||  ||||||||||||||| |||| ||||| ||  |||| ||| ||  ||||||||||||| ||||||||||| |||    
T  42439775 attttttacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttgagatcggaaaaaattca 42439676  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  42439675 tacccatacc 42439666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 25154937 - 25154837
Alignment:
Q  97 aattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaa 196  Q
    |||||||||| || ||||  |||||||||| | ||| |||||  ||| ||||||||||||| ||||| ||| ||| || | |||||||||||||| ||||    
T  25154937 aattgattttctaaattcaggacgggtttgggcatgagttcgaagtgggtacttatatccccattactcgtcccgtactcgtgttttgaaatcgggaaaa 25154838  T
Q  197 a 197  Q
    |    
T  25154837 a 25154837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 12494995 - 12495130
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    |||| |||||| | |||||||||| ||||||||||| |||| |||| ||||| ||  |||| ||| ||  | || |||||||||||||| ||||||  ||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaa 12495094  T
Q  203 acacatacctaagtccaatcaaagcggagaaaatcc 238  Q
    || |||||| ||  ||| |||||| || ||||||||    
T  12495095 acccataccgaaacccagtcaaagtggggaaaatcc 12495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 23966858 - 23966909
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    ||||||||||| | ||||||| ||||||||||||||||||| |||| |||||    
T  23966858 ttttttacatttgggacgggtatgagtatgggttcggggtgggtacctatat 23966909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 42707915 - 42707833
Alignment:
Q  128 gtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    ||||||||||||| || |||||||||| ||  |||||||| ||  |||| ||||||||||||||| |||||||| || ||||||    
T  42707915 gtatgggttcggg-tgagtacttatattcccgttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacc 42707833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 34085219 - 34085352
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||||||||||   |||| || || |||||||||||||||| |||| |||| |||  |||||| | ||  || | |||||||||||||| |||||| ||    
T  34085219 attttttacatttaggacgagtatgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaaccca 34085318  T
Q  202 aacacata-cctaagtccaatcaaagcggagaaaa 235  Q
    ||| |||| |||||  ||| |||||||||||||||    
T  34085319 aactcatatcctaa-cccagtcaaagcggagaaaa 34085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 34611060 - 34611190
Alignment:
Q  105 ttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||||| | |||||||||| |||||||||||||||| |||| ||||| |   ||||  || ||  |||| |||||||| ||||| |||||| || ||    
T  34611060 ttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatac 34611159  T
Q  205 acatacctaagtccaatcaaagcggagaaaa 235  Q
     |||||| || | |||||||| ||| |||||    
T  34611160 ccatacccaaattcaatcaaaacggggaaaa 34611190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 23490884 - 23490811
Alignment:
Q  94 ataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||  ||||||||||| | |||||||||  |||||||||||||||| |||| ||||| ||  ||||||||    
T  23490884 ataaattagttttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgt 23490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 39582355 - 39582487
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactc-a 201  Q
    |||| |||||| |||||||||||||||||| ||||  |||| |||| | |||| |||||||| |||  | ||| |||||||||||| | || ||| || |    
T  39582355 ttttctacatttgagacgggtttgagtatgagttc-aggtgggtacatgtatctctattaccagttttgtacctatgttttgaaattgaaagaaaatcga 39582453  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaa 235  Q
    ||||||||||||| || | ||||| | |||||||    
T  39582454 aacacatacctaaatctagtcaaaacagagaaaa 39582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 294
Target Start/End: Complemental strand, 44615565 - 44615388
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagt 216  Q
    |||||||||| ||||| ||| |||||| |||| ||||| ||| |||||||| ||  |||| |||||| ||||| |  ||||| ||||| |||||| ||      
T  44615565 gacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaac 44615466  T
Q  217 ccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgccatgt 294  Q
    ||| ||||| |||  |||| || | || |||||| |||| | |||||||| ||| |||| ||   |||||||||||||    
T  44615465 ccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttgccatgt 44615388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 294
Target Start/End: Original strand, 44793004 - 44793181
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagt 216  Q
    |||||||||| ||||| ||| |||||| |||| ||||| ||| |||||||| ||  |||| |||||| ||||| |  ||||| ||||| |||||| ||      
T  44793004 gacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaac 44793103  T
Q  217 ccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgccatgt 294  Q
    ||| ||||| |||  |||| || | || |||||| |||| | |||||||| ||| |||| ||   |||||||||||||    
T  44793104 ccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttgccatgt 44793181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 3628089 - 3628001
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||| | ||| ||  ||||||||||||||||||| |||| || || ||  |||||||| ||  |||| ||||||||||||||    
T  3628089 ttttttacatttgggactggaatgagtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcgg 3628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 39219232 - 39219344
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||| ||||| ||||||    ||| ||||| |||||||||||||||| |||| | ||||||  ||||  |||||| |||| |||||| |||||||    
T  39219232 taataaattaattttctacatttagaacgagtttgggtatgggttcggggtgggtacatgtatccccgttacttgttccgtacccgtgttttaaaatcgg 39219331  T
Q  192 aaaaaactcaaac 204  Q
      ||||| |||||    
T  39219332 ggaaaacccaaac 39219344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 40087568 - 40087516
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | ||||||| |||||||| |||||||||| |||| |||||    
T  40087568 attttttacatttgggacgggtatgagtatgagttcggggtgggtacctatat 40087516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 41477063 - 41477003
Alignment:
Q  96 aaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatcc 156  Q
    ||||||||||| | | |||| |||||||||| |||||| ||||||||| |||| |||||||    
T  41477063 aaattgattttctgctttcgggacgggtttgggtatggattcggggtgggtacatatatcc 41477003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 49741104 - 49741060
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||| |||||||||| |||||||||||||||| |||| |||||    
T  49741104 cattcgggacgggtttgggtatgggttcggggtgggtacctatat 49741060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 20854 - 20779
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||  || ||||||||| |||||||||    
T  20854 taataaattgattttttacattcggaacgggtttgagtatgggttcgaggtggatatttatatccccattacccgt 20779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 23475376 - 23475266
Alignment:
Q  95 taaattgatttttt-acattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||  ||| |||| |||||||| ||||||| | ||  |||| |||||||||||||| |    
T  23475376 taaattgatttttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcggga 23475277  T
Q  194 aaaactcaaac 204  Q
    ||||| |||||    
T  23475276 aaaacccaaac 23475266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 12980366 - 12980454
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||| |||| | |||||||||| |||||||||||||||| |||||||||| || ||||||||| ||  |||| ||||||||||||||    
T  12980366 ttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcgg 12980454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 32546198 - 32546288
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatac 210  Q
    ||||||| |||||||||||||||| |||| ||||||||  |||||||||||| |||| | |||||||||||| |||||  ||||| |||||    
T  32546198 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaatccaaacccatac 32546288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 8906618 - 8906561
Alignment:
Q  178 tgttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  8906618 tgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcggagaaaa 8906561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 33841071 - 33841167
Alignment:
Q  107 ttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaa 203  Q
    ||||||| | ||||||| ||||||||||||||||||| |||| |||| || | |||||||| ||  |||| ||||||||||||||  ||||||||||    
T  33841071 ttacatttgggacgggtatgagtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaa 33841167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 26622939 - 26623026
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatc 189  Q
    ||||||| ||||||| ||| ||||| |||||||||||||||| |||||||||| || ||||||| | ||  |||| ||||||||||||    
T  26622939 attttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatc 26623026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 19440123 - 19440013
Alignment:
Q  95 taaattgatttttt-acattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaa 193  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||  ||| |||| |||||||| ||||||| | ||  |||| |||||| ||||| |      
T  19440123 taaattgatttttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttcaaatcaggg 19440024  T
Q  194 aaaactcaaac 204  Q
    |||||||||||    
T  19440023 aaaactcaaac 19440013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 38152875 - 38153028
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | |||||||||  |||||||||||||||| |||| |||||  |  ||| |||||||  |||||||||||||||||||  ||||| ||    
T  38152875 attttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaaccca 38152974  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtt 256  Q
     || |||||| ||  ||| ||||| ||| |||||||| | || |||||| |||||    
T  38152975 tacccatacccaaacccagtcaaaacgg-gaaaatccgtcaaattgagtttggtt 38153028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 3227051 - 3226962
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | || | || ||||||||||||||||||| |||| ||||| ||| |||||||| ||  |||| ||||||||||||||    
T  3227051 attttttacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcgg 3226962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 7779998 - 7780187
Alignment:
Q  104 tttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaa 203  Q
    |||||||||| | |||||||||| |||| ||||||||||| |||| ||||| || |||| |||| ||  |||| |||||||| |||||  ||||| || |    
T  7779998 tttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccata 7780097  T
Q  204 cacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggtacccaagggtgtgaactttgttgccatg 293  Q
    | |||||| ||  ||| ||||| ||| |||||||| | || |||||| |||||  | |||||| ||| |||| ||   ||||||||||||    
T  7780098 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgggtaaccacgggtatgggttttgttgccatg 7780187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 10072454 - 10072543
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | ||||| | || |||||||||||||||| |||| ||||| ||  |||||||||||  |||| ||||||||||||||    
T  10072454 attttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcgg 10072543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 30650619 - 30650752
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||| |||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| |||||||| || ||  ||||||||    
T  30650619 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactca 30650718  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaa 235  Q
     || |||||||||  ||| ||||| ||| |||||    
T  30650719 tacccatacctaaacccagtcaaaacggggaaaa 30650752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 38139896 - 38139811
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaat 188  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||||| |  ||||||||| ||  || | |||||||||||    
T  38139896 ttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaat 38139811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 45885870 - 45885737
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||| |||  |||||||||||||||| |||| ||||| | | |||||||| ||  |||| |||||||| |||||  ||||||||    
T  45885870 attttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactca 45885771  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaa 235  Q
     || |||||| ||  ||| ||||| |||||||||    
T  45885770 tacccatacccaaacccagtcaaaacggagaaaa 45885737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3774047 - 3774111
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatcc 156  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||| ||||| |||| |||||||    
T  3774047 taataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcc 3774111  T

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Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 22973382 - 22973485
Alignment:
Q  108 tacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacaca 207  Q
    ||||||||||  ||||||| ||||||||||| |||| ||||  ||||||| ||||||||| ||| |||| | |||||||||||   ||||| ||||| ||    
T  22973382 tacattcgagtagggtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaaccca 22973481  T
Q  208 tacc 211  Q
    ||||    
T  22973482 tacc 22973485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 266
Target Start/End: Original strand, 37217986 - 37218157
Alignment:
Q  97 aattgattttttacattcgagacgggtttgag-tatgggttcggggtgtgtacttatatcccta-ttacccgttccgcacccatgttttgaaatcggaaa 194  Q
    |||||||||| || ||||  |||||||||| | |||| ||||||| |  |||||||||||||   |||||||| ||| |||  ||||||||||| ||| |    
T  37217986 aattgattttctatattcaggacgggtttggggtatgagttcgggcttggtacttatatcccccgttacccgtcccgtacctgtgttttgaaataggata 37218085  T
Q  195 aaactcaaacacatacctaagtccaatcaaagcggagaaaatccataaatttgagtgtggtttaggtgggta 266  Q
    |||||||||| |||||| ||  ||| ||||| ||| ||||| |||| || |||||| |||||  ||||||||    
T  37218086 aaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggtgggta 37218157  T

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Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 39456117 - 39456031
Alignment:
Q  104 tttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||| | ||||||| ||||||||| ||||||||| |||| ||||| ||  |||||||| ||  |||||||||||||||||||    
T  39456117 tttttacatttgggacgggtatgagtatgg-ttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcgg 39456031  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 44734462 - 44734356
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | ||||| | || |||||||||||||||| |||| ||||| || |||||| || ||  |||| |||||||||||||  |||||| ||    
T  44734462 attttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcgagaaaaacaca 44734363  T
Q  202 aacacat 208  Q
     ||||||    
T  44734362 tacacat 44734356  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 16866157 - 16866246
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||  |||| ||| ||  |||| |||||||| |||||    
T  16866157 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcgg 16866246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 27850431 - 27850342
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||| |||||||| |||||||||| ||||||||||||| || |||| ||||  ||  |||||||| ||  |||| ||||||||||||||    
T  27850431 attttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcgg 27850342  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 41103644 - 41103733
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||   |||||||||  |||||||||||||||| |||||||||| ||  ||| |||| ||  |||| ||||||||||||||    
T  41103644 attttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgg 41103733  T

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Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 2630677 - 2630570
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    |||||| |||||| |||||||||| |||||||||||||||| |||  ||||| ||  | |||||| ||  ||||||||||| |||||||  ||||| |||    
T  2630677 ttttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaa 2630579  T
Q  203 acacatacc 211  Q
    || ||||||    
T  2630578 acccatacc 2630570  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 3157061 - 3157160
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||||||| ||  || | |||||||||| |||| ||||||| ||| |||| ||||||||  ||| |||| ||  |||||| ||||||||||||    
T  3157061 taataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcgg 3157160  T

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Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 198
Target Start/End: Complemental strand, 18125332 - 18125237
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaac 198  Q
    ||||||||||| | |||||||||| ||||| |||||||||| |||| ||||| ||  |||||||| ||  |||| ||||| || ||||| ||||||    
T  18125332 ttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaac 18125237  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 18683980 - 18684051
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||| ||||||||||| ||||  ||| ||||||||| |||||||| ||| |||| | ||||||||||||    
T  18683980 gggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcgg 18684051  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 45380096 - 45380191
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaac 198  Q
    ||||||||||| | |||| ||||  |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| | |||||||||||| ||||||    
T  45380096 ttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaac 45380191  T

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Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 3920526 - 3920628
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||| |||||||| ||| | |||| |||||||||||||||| |||| ||||| ||| ||| |||| ||  |||  ||||||||||||||  ||||| ||    
T  3920526 attttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaaccca 3920625  T
Q  202 aac 204  Q
    |||    
T  3920626 aac 3920628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 27896580 - 27896454
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||| ||||| ||||||| || ||||| |||||||||  || | |||| |||  |||||||| ||  ||||||||||||||||  |  ||||| ||    
T  27896580 attttttatattcgggacgggtatgggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaaccca 27896481  T
Q  202 aacacatacctaagtccaatcaaagcg 228  Q
    ||| |||||| ||  ||||||||||||    
T  27896480 aacccatacccaaacccaatcaaagcg 27896454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 10995923 - 10995830
Alignment:
Q  118 acgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    |||||| || |||||||||||||||| |||  |||| |||| |||||||| ||  |||| ||| ||||||||||  ||||| ||||| ||||||    
T  10995923 acgggtatgggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaactcatacc 10995830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 17885453 - 17885542
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    |||||||||||| | ||||||| || |||||||||||||||  | || ||||| ||  |||||||| ||  ||||||||||| |||||||    
T  17885453 attttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcgg 17885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 29014979 - 29014934
Alignment:
Q  180 ttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaa 225  Q
    |||||||||||| |||||||||||| |||||||||  |||||||||    
T  29014979 ttttgaaatcgggaaaaactcaaactcatacctaaacccaatcaaa 29014934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 5377081 - 5377181
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    |||||| ||| | |||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||  ||||||||||||||  ||||| ||||| ||||    
T  5377081 cattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcata 5377180  T
Q  210 c 210  Q
    |    
T  5377181 c 5377181  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 18825959 - 18825875
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||| ||| |||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||||||||||||  ||||| |||||    
T  18825959 gggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 18825875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 21702648 - 21702712
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||| | |||||||||||||||| |||| ||||| ||  ||||||||    
T  21702648 ttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgt 21702712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 27063127 - 27063235
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaa 202  Q
    |||| |||||||| |  ||||||| ||||| |||||||||| |||| ||||||||  ||| |||| | | |||| | |||||||||||   |||||||||    
T  27063127 ttttctacattcgggtagggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaa 27063226  T
Q  203 acacatacc 211  Q
    || ||||||    
T  27063227 actcatacc 27063235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 35074459 - 35074523
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||||| ||||||||||||| || |||| ||||| ||  ||||||||    
T  35074459 ttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgt 35074523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 42908103 - 42908023
Alignment:
Q  145 gtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaa 225  Q
    |||| |||||||| ||||||||| ||| |||| | ||||||||||||  ||||| ||||| |||||| ||  |||||||||    
T  42908103 gtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

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Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 8916042 - 8915954
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||| ||||| ||| |||||||| ||  |||| |||||||| ||||    
T  8916042 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcg 8915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 35965310 - 35965420
Alignment:
Q  93 aataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgga 192  Q
    |||||||||||||| |||||||| |||||||||| |||||||||||| ||| |||| | |||||| ||||| |  |||  |||| ||||||||||||||     
T  35965310 aataaattgattttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacac-atccatacccgtgttttgaaatcggg 35965408  T
Q  193 aaaaactcaaac 204  Q
     |||||||||||    
T  35965409 gaaaactcaaac 35965420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 17845507 - 17845394
Alignment:
Q  92 taataaattgatttttt-acattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  ||||| ||||||||||  | |||||| ||  |  || | |||||||||||||    
T  17845507 taataaattgatttttttacattcgagacgggtttgggtatgggttaagggtgggtacttatatgtccattaccggtctcatactcgtgttttgaaatcg 17845408  T
Q  191 gaaaaaactcaaac 204  Q
     | |||||||||||    
T  17845407 aagaaaactcaaac 17845394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 24414236 - 24414148
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| ||||| ||| |||||||| ||  |||| |||||||| |||||    
T  24414236 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcgg 24414148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 45256798 - 45256906
Alignment:
Q  93 aataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgga 192  Q
    |||||| | |||||||||||| | |||||||||  |||||||||||||||| |||||||||| || |||| ||||  |  |||| ||||||||||||||     
T  45256798 aataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggg 45256897  T
Q  193 aaaaactca 201  Q
     ||||||||    
T  45256898 gaaaactca 45256906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 30696898 - 30696995
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatc 189  Q
    |||||||||||||||||||||| | ||  |||||| ||||| |||||||||| |||| |||||| || ||||||||  || | ||||||||| |||||    
T  30696898 taataaattgattttttacatttgggataggtttgggtatgagttcggggtgggtacatatatctctgttacccgtctcgtatccatgttttaaaatc 30696995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 13830720 - 13830772
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    |||||||||||| | ||| ||||||||||||||||||||||| ||||||||||    
T  13830720 attttttacatttgggacaggtttgagtatgggttcggggtgggtacttatat 13830772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 4961566 - 4961495
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattac 163  Q
    ||||||||| ||||| || ||||| |||| ||||| ||||||||||| ||||||||| ||||||||| ||||    
T  4961566 taataaattcattttctatattcgggacgagtttgggtatgggttcgaggtgtgtacctatatccctgttac 4961495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 6027979 - 6027892
Alignment:
Q  117 gacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||| ||||||||||||||||||| |||| ||||| ||| ||||||||  |  ||||||||||| |||||||  ||||| |||||    
T  6027979 gacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaaac 6027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 37999467 - 37999532
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||||||| | |||||||||| ||||| |||||||||| |||||||||| ||  ||||||||    
T  37999467 attttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgt 37999532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 38342606 - 38342517
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    ||||||| |||||||||||||||| |||| ||||||||  |||||||| ||| | || | |||| |||||||  ||||||||||| ||||    
T  38342606 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaacccata 38342517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 9632371 - 9632435
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | |||||||||| ||||||||||||||||  ||| ||||| || |||||||||    
T  9632371 ttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgt 9632435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 13954719 - 13954862
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtat-gggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    |||||| |||||||| ||| |||||||||||||||||||| ||||||   ||| | ||| |||||| | ||||| || ||| | || |||||| ||||||    
T  13954719 taataagttgattttctacgttcgagacgggtttgagtatggggttcaatgtgggcactaatatccttgttacctgtcccgta-ccgtgttttaaaatcg 13954817  T
Q  191 gaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
    |  |||| ||||||||||||| ||  ||| |||||||| ||||||    
T  13954818 gggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaa 13954862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 14095926 - 14096069
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtat-gggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    |||||| |||||||| ||| |||||||||||||||||||| ||||||   ||| | ||| |||||| | ||||| || ||| | || |||||| ||||||    
T  14095926 taataagttgattttctacgttcgagacgggtttgagtatggggttcaatgtgggcactaatatccttgttacctgtcccgta-ccgtgttttaaaatcg 14096024  T
Q  191 gaaaaaactcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
    |  |||| ||||||||||||| ||  ||| |||||||| ||||||    
T  14096025 gggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaa 14096069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 24051703 - 24051591
Alignment:
Q  128 gtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacctaagtccaatcaaagc 227  Q
    |||||||||||||||  |||| ||||||||| |||||||| ||  || | | |||| |||||||| ||| | ||||| |||||| ||  ||||| ||| |    
T  24051703 gtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaatcccaaacccatacccaaacccaattaaatc 24051604  T
Q  228 ggagaaaatccat 240  Q
    |||||||||||||    
T  24051603 ggagaaaatccat 24051591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 42798092 - 42798028
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| | ||| |||||| |||||||||||||||| |||||||||| ||  ||||||||    
T  42798092 ttttttacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgttacccgt 42798028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 3547168 - 3547251
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaa 203  Q
    |||||||  ||||||||||||||| |||| |||||| |  |||||||| ||| |||| | |||||||||||| |||||| ||||    
T  3547168 gggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaaacccaaa 3547251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 35248489 - 35248402
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    |||| |||||||  |||||||||| |||||||||||||||| |||| | ||||||  |||||||| ||  |||| ||||||| |||||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcg 35248402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 36128210 - 36128159
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatat 154  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||| |||||    
T  36128210 ttttttacatttgggacgggtttgggtatgggttcggggtgagtacctatat 36128159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 25210355 - 25210457
Alignment:
Q  96 aaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaa 195  Q
    ||||||||||| |||||||| || ||||||  ||||||||| |||||| |||| |||||||   |||||||| ||  |||| |||||| || |||| |||    
T  25210355 aaattgattttctacattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaa 25210454  T
Q  196 aac 198  Q
    |||    
T  25210455 aac 25210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 40359318 - 40359384
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccct 158  Q
    |||||||||||||||||||||| ||||  |||||||||||  ||||| | || |||| |||||||||    
T  40359318 taataaattgattttttacatttgagagaggtttgagtattagttcgagatgggtacctatatccct 40359384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 10208535 - 10208470
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    |||||||||||| | ||| ||||||||||||||||||||||  |||| |||||  | |||||||||    
T  10208535 attttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgt 10208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 13705466 - 13705357
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||| ||||| | |||||||||  |||||||||||||||| |||| ||||| ||  ||||| ||  |  |||| ||||||||||||||  ||||||||    
T  13705466 atttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactca 13705367  T
Q  202 aacacatacc 211  Q
     || ||||||    
T  13705366 tacccatacc 13705357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 15546728 - 15546861
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    |||||||||||| | || |||| || |||||||||| ||||| |||  |||| || | |||||||| ||  |||| ||||||||||||||  ||||| ||    
T  15546728 attttttacatttgggaagggtatgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 15546827  T
Q  202 aacacatacctaagtccaatcaaagcggagaaaa 235  Q
    ||| ||| || |  |||| ||||||||| |||||    
T  15546828 aacccatgcccagatccagtcaaagcggggaaaa 15546861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 22900778 - 22900887
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactca 201  Q
    ||||||||| || | ||||||| || ||||| |||||||||| |||  |||| |||  |||| ||| ||  |||| |||||||||||||| |||||| ||    
T  22900778 attttttacgtttgggacgggtatgggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaaccca 22900877  T
Q  202 aacacatacc 211  Q
    ||| ||||||    
T  22900878 aacccatacc 22900887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 13531923 - 13531987
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatcc 156  Q
    ||||||||||||||| |||||  | | ||||||||||| |||||||||||||  ||| |||||||    
T  13531923 taataaattgattttctacatgtggggcgggtttgagtgtgggttcggggtgaatacatatatcc 13531987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 30846931 - 30846995
Alignment:
Q  103 ttttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||| | | |||||||||| |||||||||||||||| |||| ||||| ||  ||||||||    
T  30846931 ttttttacaattgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 30846995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 43371555 - 43371639
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaac 204  Q
    ||||||| ||||| ||| |||||| |||| ||||||||  |||||||| ||| |||| | |||| |||||||  |||||||||||    
T  43371555 gggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaac 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 45115542 - 45115630
Alignment:
Q  102 attttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcg 190  Q
    |||||||||||| | || |||||| | |||||||||||| || |||| ||||| ||| ||||||||  |  |||| |||||||||||||    
T  45115542 attttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaatcg 45115630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 128208 - 128118
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatac 210  Q
    ||||||| |||||||||||||||| |||| |||||||| ||||||||| ||| |||| | || |||||| ||||||||| ||||| |||||    
T  128208 gggtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcatac 128118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 105556 - 105479
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaa 197  Q
    ||||||| |||||||||||||||| |||| ||||||||| |||||||| ||| |||| | ||  ||||||||||||||    
T  105556 gggtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgtattaagaaatcggaaaaaa 105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 211367 - 211456
Alignment:
Q  122 gtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    ||||| |||||||||||||||| |||| ||||||||| ||||||||  || |||| | ||||||||||||| ||||| ||||| ||||||    
T  211367 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacc 211456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 33384 - 33485
Alignment:
Q  110 cattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacata 209  Q
    |||||| |||| ||||| |||||||||||||||| |||| ||||| ||  |||||||| ||  |||| ||||||||||||||  ||||| ||||| ||||    
T  33384 cattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccata 33483  T
Q  210 cc 211  Q
    ||    
T  33484 cc 33485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 2970 - 3061
Alignment:
Q  120 gggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcggaaaaaactcaaacacatacc 211  Q
    |||||||||||||||||||||||| |||| ||||||||  ||| |||| | | |||| | ||||||||||||  ||||| ||||| ||||||    
T  2970 gggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacc 3061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 107506 - 107363
Alignment:
Q  92 taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgttccgcacccatgttttgaaatcgg 191  Q
    ||||||| | |||||  |||||||  ||| |||||| |||| |||||||||| |||||||||||  |  ||||||| ||  |||  |||||||||||||     
T  107506 taataaagtaattttcaacattcggaacgagtttgaatatgagttcggggtgggtacttatatctatgctacccgtcccatacctgtgttttgaaatcga 107407  T
Q  192 aaaaaactcaaacacatacctaagtccaatcaaagcggagaaaa 235  Q
     ||||||||||||  ||||||||  |||||||||| || |||||    
T  107406 gaaaaactcaaacctatacctaaacccaatcaaagtggggaaaa 107363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 14832 - 14906
Alignment:
Q  93 aataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtacttatatccctattacccgt 167  Q
    ||||||||||| |||||| |||  |||||||||| ||||| |||| ||||| ||||| ||||||| |||||||||    
T  14832 aataaattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtactaatatccccattacccgt 14906  T

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