View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19808_low_8 (Length: 463)
Name: NF19808_low_8
Description: NF19808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19808_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 13 - 449
Target Start/End: Complemental strand, 37966077 - 37965640
Alignment:
| Q |
13 |
atttcagtctctcttcatactcatggaattttgctattatggtgacatcttctacatagttcaagagtctctcttttacgtgcctatgaatatgcgagct |
112 |
Q |
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| T |
37966077 |
atttcagtctctcttcatactcctggaatcttgttattatggagacatcttctacatggttcaagagtatctcttttacgtgtctatgaatatgcgagct |
37965978 |
T |
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| Q |
113 |
tattaatattccctttgtttgtgactttgatc-tcctttgtacgagnnnnnnnngaacttaactattttagtatttaacaaaaacttgtacatttacgat |
211 |
Q |
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| T |
37965977 |
tattaattttcccttcgtttgtgaccctgaccctcctttgtacgagaaaaaaac--acttgactattttagtatttaacaacaacttgtacatttacaat |
37965880 |
T |
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| Q |
212 |
agacaagtttaagaaggnnnnnnng----aacaagacaagtttgagtaggctaacatacgcttctgatcattcttccttttaaaacttattttggtcaat |
307 |
Q |
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| T |
37965879 |
agacaagtttaagaagtttttttttttttaacaagacaagtttgagtaggctaacatatgtttttgatcattcttccttttaaaacttattttggtcaat |
37965780 |
T |
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| Q |
308 |
ttattgtcatacaaattcatcagtttacttaactatatttaatttgagttgtgttggcaattatatagcttatataatatgtcaaaaaatcttttatgta |
407 |
Q |
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| T |
37965779 |
gtgctgtcatacaaattcatcattttacttaactatatttaatttcagttgtgttggcaattatatatcttatataatatgtc--aaaatcttttatgta |
37965682 |
T |
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| Q |
408 |
aactgtttggtgttagccttctagtttataagggaagatgat |
449 |
Q |
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| T |
37965681 |
aactggttggtgttaacccgctagtttatatgggaagatgat |
37965640 |
T |
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