View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19809_high_2 (Length: 249)
Name: NF19809_high_2
Description: NF19809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19809_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 41938972 - 41938750
Alignment:
| Q |
16 |
tttggaaggtataaattgatatatggtctcctttgtattcatgtacttattaaataagtatacacagtgtacacagtggacgtatttatgttattcactt |
115 |
Q |
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| T |
41938972 |
tttggaaggtataaattgatatatggtctcctttgtattcatgtacttattaaataagtatacacagtgtacacggtggacgtatttatgttattcactt |
41938873 |
T |
|
| Q |
116 |
gtttgatgtgctaccatgctaccatcgtggcttttcttatctcttctgtttatctggatagtataacttattgggcttaccatttaccactgatttttaa |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41938872 |
gtttgatgtgctaccatgctaccatcgtggcttttcttatctcttttgtttatctggatagtataacttattgggcttaccatttaccactgatttttaa |
41938773 |
T |
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| Q |
216 |
tatagcctcacaatctttatttt |
238 |
Q |
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||||||||||||||||||||||| |
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| T |
41938772 |
tatagcctcacaatctttatttt |
41938750 |
T |
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