View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19809_low_3 (Length: 307)
Name: NF19809_low_3
Description: NF19809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19809_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 31607743 - 31607461
Alignment:
| Q |
9 |
catcatcaccaacctcaagctcttcttcttgcattcgaagattcacaaagcgatttaaaagaatacaaatcagactagtaataacaacattccaaatagt |
108 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31607743 |
catcatcaccaacctcaaggtcttcttcttgcattcgaagattcacaaagcgatttaaaagaatacaaatcagactagtaataacaacattccaaatagt |
31607644 |
T |
|
| Q |
109 |
aataaaaactgctcctaataattggtaccacatttgcttgattccttgacctatattatcatcaaaataactatacaataagccagacccataaggacca |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31607643 |
aataaaaactgctcctaataattggtaccacatttgcttgattccttgacctatattatcatcaaaataactatacaataagccagacccataaggacca |
31607544 |
T |
|
| Q |
209 |
tagagaatcctcaaaagtttaggtttggcaaacacaccagaaaggattcccccaagaataccagccacagcatgagtgtgaaa |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31607543 |
tagagaatcctcaaaagtttaggtttggcaaacacaccagaaaggattcccccaagaataccagccacagcatgagtgtgaaa |
31607461 |
T |
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