View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19810_high_9 (Length: 208)
Name: NF19810_high_9
Description: NF19810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19810_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 11778274 - 11778101
Alignment:
| Q |
20 |
ttcatgtcatttctcttcaagaaagtgtttaagtaaaccaagcactgttcacaagcagattattctttcggacagcaagtcagcgacaattagctaaata |
119 |
Q |
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| T |
11778274 |
ttcatttcatttcgcttcaagaaagtgtataagtaaaccaagcactgttcacaagcagattattctttcagacagcaagtcagcgacaattagctaaata |
11778175 |
T |
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| Q |
120 |
tgtatttcatgtgaaagaattatctgaatgtatatttgatcatactacaccaaaattccttaataactgcacat |
193 |
Q |
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| T |
11778174 |
tgtatttcatgtgaaagaattatctgaatgtatatgtgatcatactacaccaaaattccttaataactgcacat |
11778101 |
T |
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