View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19810_low_3 (Length: 461)

Name: NF19810_low_3
Description: NF19810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19810_low_3
NF19810_low_3
[»] chr3 (8 HSPs)
chr3 (14-461)||(10817827-10818276)
chr3 (14-386)||(1614300-1614668)
chr3 (14-386)||(1608824-1609192)
chr3 (14-364)||(1632312-1632654)
chr3 (413-461)||(30385166-30385214)
chr3 (427-461)||(25629430-25629464)
chr3 (427-461)||(42592399-42592433)
chr3 (419-461)||(53204514-53204556)
[»] chr8 (7 HSPs)
chr8 (421-461)||(10398723-10398763)
chr8 (422-461)||(45467431-45467470)
chr8 (424-461)||(4881076-4881113)
chr8 (428-461)||(9237781-9237814)
chr8 (420-461)||(12823258-12823299)
chr8 (416-461)||(45467834-45467879)
chr8 (421-461)||(29802153-29802193)
[»] chr1 (1 HSPs)
chr1 (419-461)||(48225419-48225461)
[»] chr4 (4 HSPs)
chr4 (424-461)||(27509629-27509666)
chr4 (422-461)||(32617622-32617661)
chr4 (421-461)||(9450961-9451001)
chr4 (425-461)||(25764359-25764395)
[»] chr6 (5 HSPs)
chr6 (425-461)||(30859917-30859953)
chr6 (428-461)||(9102743-9102776)
chr6 (428-461)||(9899560-9899593)
chr6 (428-461)||(29048313-29048346)
chr6 (421-461)||(5645891-5645931)
[»] chr2 (5 HSPs)
chr2 (421-461)||(45001046-45001086)
chr2 (426-461)||(39110070-39110105)
chr2 (427-461)||(36099292-36099326)
chr2 (424-461)||(7182724-7182761)
chr2 (424-461)||(18905035-18905072)
[»] chr7 (5 HSPs)
chr7 (417-461)||(19105624-19105669)
chr7 (84-152)||(18786841-18786909)
chr7 (429-461)||(22151886-22151918)
chr7 (429-461)||(22207801-22207833)
chr7 (425-461)||(36701765-36701801)
[»] chr5 (1 HSPs)
chr5 (420-461)||(6132271-6132312)
[»] scaffold0295 (1 HSPs)
scaffold0295 (425-461)||(8241-8277)


Alignment Details
Target: chr3 (Bit Score: 378; Significance: 0; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 14 - 461
Target Start/End: Complemental strand, 10818276 - 10817827
Alignment:
Q  14 atagcaacattcataagcttacttataaatgcactaatttggaatttgcggctgtgactatatatataattaaattaatatgttgatgagaatgttgagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10818276 atagcaacattcataagcttacttataaatgcactaatttggaatttgcggctgtgactatatatataattaaattaatatgttgatgagaatgttgagt 10818177  T
Q  114 tggcttaagttgtgtgtttgtttcatatgcatgcataatattgttaaagaaaattgaatatattatcctttttattaagaagacttattttagggtggga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10818176 tggcttaagttgtgtgtttgtttcatatgcatgcataatattgttaaagaaaattgaatatattatcctttttattaagaagacttattttagggtggga 10818077  T
Q  214 tgaattatagtttctttgaacatagtaaccaaattcacctggtagggttttgtgagcattttgttcaagcatatagnnnnnnnnttcattaactccatgt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||    
T  10818076 tgaattatagtttctttgaacatagtaaccaaattcacctggtagggttttgtgagcattttgttcaagcatatagaaaaaaaattcattaactccatgt 10817977  T
Q  314 gcttttagttgcaaattaagc--gagaaggaaatatgtaggcgattttgacaaatattgtgtgaacatacgttcannnnnnnaagatggtaacactcgtt 411  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||    
T  10817976 gcttttagttgcaaattaagcaagagaaggaaatatgtaggcgattttgacaaatattgtgtgaacatacgttcatttttttaaggtgttaacactcgtt 10817877  T
Q  412 catgtatttaaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10817876 catgtatttaaattaaggcttaattcctcatttggtcccttaacttattt 10817827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 386
Target Start/End: Original strand, 1614300 - 1614668
Alignment:
Q  14 atagcaacattcataagcttacttataaatgcactaatttggaatttgcggctgtgactatatatataattaaattaatatgttgatgagaatgttgagt 113  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||            |||||||||||||    
T  1614300 atagcaacattcttaagcttacttataaatgtactaatttggaatttgcggctgtgactatatatataattaaat------------gagaatgttgagt 1614387  T
Q  114 tggcttaagttgtgtgtttgtttcatatgcatgcataatattgttaaagaaaattgaatatattatcctttt-tattaagaagacttattttagggtggg 212  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1614388 tggcttaagttgtgtatttgtttcatattcatgcataatattgttaaagaaaattgaatatattatccttttttattaagaagacttattttagggtggg 1614487  T
Q  213 atgaattatagtttctttgaacatagtaaccaaattcacctggtagggttttgtgagcattttgttcaagcatatagnnnnnnnnttcat-ta---actc 308  Q
     ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||  | ||   ||||    
T  1614488 gtgaagaatagtttctttgaacatagtaaccaaattcacctggtagggttttgtgagcattttgttcaagcatatagaagaaattttattgtacgtactc 1614587  T
Q  309 catgtgcttttag-ttgcaaattaagc--gagaaggaaatatgtaggcgattttgacaaatattgtgtgaacatacgttca 386  Q
    ||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||| | ||||| |||||| |||||    
T  1614588 catgtgcttttagtttgcaaattaagcaagagaaggaaatatgtatgcgattttgacaaaaaatgtgtcaacataagttca 1614668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 14 - 386
Target Start/End: Original strand, 1608824 - 1609192
Alignment:
Q  14 atagcaacattcataagcttacttataaatgcactaatttggaatttgcggctgtgactatatatataattaaattaatatgttgatgagaatgttgagt 113  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||       || |  |||||||||    
T  1608824 atagcaatattcttaagcttacttataaatgcactaatttggattttgcggctgtgactatatatata--taaattaa-------attaatatgttgagt 1608914  T
Q  114 tggcttaagttgtgtgtttgtttcatatgcatgcataatattgttaaagaaaattgaatatattatcctttttattaagaagacttattttagggtggga 213  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1608915 tggct-aagttgtgtgtttatttcatatgcatgcataatgttgttaaa-aaaattgaatatattatcctttttattaagaagacttattttagggtgggg 1609012  T
Q  214 tgaattatagtttctttgaacatagtaaccaaattcacctggtagggttttgtgagcattttgttcaagcatatagnnnnnnnnttcat-ta---actcc 309  Q
    ||||  |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||        ||  | ||   |||||    
T  1609013 tgaaggatagttgctttgaacatagtaacctaattcacctggtagggttttgtgagcgttttgttcaagcatatagaagaaattttattgtacgtactcc 1609112  T
Q  310 atgtgcttttag-ttgcaaattaagc--gagaaggaaatatgtaggcgattttgacaaatattgtgtgaacatacgttca 386  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||||||||||| ||| ||||||| |||||| |||||    
T  1609113 atgtgcttttagtttgcaaattaagcaagagaaggaaatatgtaggcgattttgataaaaattgtgtcaacataagttca 1609192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 14 - 364
Target Start/End: Original strand, 1632312 - 1632654
Alignment:
Q  14 atagcaacattcataagcttacttataaatgcactaatttggaatttgcggctgtgactatatatataattaaattaatatgttgatgagaatgttgagt 113  Q
    |||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1632312 atagcaacattcttaagcttgcttataaatgcactaatttggattttgcggctgtgactatatacataattaaattaatatgttgatgagaatgttgagt 1632411  T
Q  114 tggcttaagttgtgtgtttgtttcatatgcatgcataatattgttaaagaaaattgaatatattatcctttttattaagaagacttattttagggtggga 213  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||               |||||||||||     
T  1632412 tggc-taagttgtgtgtttatttcatatgcatgcataatgttgttaaagaaaattgaatatattatccttttt--------------gtttagggtgggg 1632496  T
Q  214 tgaattatagtttctttgaacatagtaaccaaattcacctggtagggttttgtgagcattttgttcaagcatatagnnnnnnnnttcat----taactcc 309  Q
    ||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        || ||      |||||    
T  1632497 tgaaggatagtttctttgaacattgtaaccaaattcacctggtagggttttgtgagcgttttgttcaagcatataggtgaaattttaatgtccgtactcc 1632596  T
Q  310 atgtgcttttag-ttgcaaattaagc--gagaaggaaatatgtaggcgattttgacaa 364  Q
    |||||||||||| |||||||||||||   | |||||||||||||||||||||||||||    
T  1632597 atgtgcttttagtttgcaaattaagcaaaacaaggaaatatgtaggcgattttgacaa 1632654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 461
Target Start/End: Original strand, 30385166 - 30385214
Alignment:
Q  413 atgtatttaaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||  || ||||||||||| |||||||||||||||||||||||    
T  30385166 atgtatttatttttaggcttaattactcatttggtcccttaacttattt 30385214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 461
Target Start/End: Original strand, 25629430 - 25629464
Alignment:
Q  427 aggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||| |||||||||||||||||||||||    
T  25629430 aggcttaattactcatttggtcccttaacttattt 25629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 461
Target Start/End: Original strand, 42592399 - 42592433
Alignment:
Q  427 aggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||| |||||||||||||||||||||||    
T  42592399 aggcttaattactcatttggtcccttaacttattt 42592433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 461
Target Start/End: Original strand, 53204514 - 53204556
Alignment:
Q  419 ttaaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||| ||||||||||||| || ||||||||||||||||||||    
T  53204514 ttaaaataaggcttaattactcttttggtcccttaacttattt 53204556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 10398763 - 10398723
Alignment:
Q  421 aaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10398763 aaattaaggcttaattactcatttggtcccttaacttattt 10398723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 461
Target Start/End: Original strand, 45467431 - 45467470
Alignment:
Q  422 aattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  45467431 aattaaggcttaattactcttttggtcccttaacttattt 45467470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Original strand, 4881076 - 4881113
Alignment:
Q  424 ttaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  4881076 ttaaggtttaattactcatttggtcccttaacttattt 4881113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 461
Target Start/End: Complemental strand, 9237814 - 9237781
Alignment:
Q  428 ggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||| |||||||||||||||||||||||    
T  9237814 ggcttaattattcatttggtcccttaacttattt 9237781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 12823258 - 12823299
Alignment:
Q  420 taaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||| |||||||||||| || ||||||||||||||||||||    
T  12823258 taaataaaggcttaattactcttttggtcccttaacttattt 12823299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 45467879 - 45467834
Alignment:
Q  416 tatttaaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||| | |||||||||||| || ||||||||||||||||||||    
T  45467879 tatttaattcaaggcttaattactcttttggtcccttaacttattt 45467834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 421 - 461
Target Start/End: Original strand, 29802153 - 29802193
Alignment:
Q  421 aaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  29802153 aaatttaggcttaattactcttttggtcccttaacttattt 29802193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 461
Target Start/End: Complemental strand, 48225461 - 48225419
Alignment:
Q  419 ttaaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  48225461 ttaaattaaggcttaattactcttttggtcccttaacttattt 48225419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 461
Target Start/End: Original strand, 27509629 - 27509666
Alignment:
Q  424 ttaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27509629 ttaaggcttaattactcatttggtcccttaacttattt 27509666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 461
Target Start/End: Complemental strand, 32617661 - 32617622
Alignment:
Q  422 aattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  32617661 aatttaggcttaattactcatttggtcccttaacttattt 32617622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 9451001 - 9450961
Alignment:
Q  421 aaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||||||| | |||||||||||||| ||||||    
T  9451001 aaattaaggcttaattaatgatttggtcccttaagttattt 9450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 25764359 - 25764395
Alignment:
Q  425 taaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||| || ||||||||||||||||||||    
T  25764359 taaggcttaattactcttttggtcccttaacttattt 25764395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 30859917 - 30859953
Alignment:
Q  425 taaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||| |||||||||||||||||||||||    
T  30859917 taaggcttaattactcatttggtcccttaacttattt 30859953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 461
Target Start/End: Complemental strand, 9102776 - 9102743
Alignment:
Q  428 ggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||| |||||||||||||||||||||||    
T  9102776 ggcttaattaatcatttggtcccttaacttattt 9102743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 461
Target Start/End: Original strand, 9899560 - 9899593
Alignment:
Q  428 ggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||| |||||||||||||||||||||||    
T  9899560 ggcttaattactcatttggtcccttaacttattt 9899593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 461
Target Start/End: Original strand, 29048313 - 29048346
Alignment:
Q  428 ggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||| |||||||||||||||||||||||    
T  29048313 ggcttaattactcatttggtcccttaacttattt 29048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 5645931 - 5645891
Alignment:
Q  421 aaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||| |||||||||||| || ||||||||||||||||||||    
T  5645931 aaataaaggcttaattactcttttggtcccttaacttattt 5645891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 461
Target Start/End: Original strand, 45001046 - 45001086
Alignment:
Q  421 aaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  45001046 aaatttaggcttaattactcatttggtcccttaacttattt 45001086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 461
Target Start/End: Original strand, 39110070 - 39110105
Alignment:
Q  426 aaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||| |||||||||||||||||||||||    
T  39110070 aaggcttaattactcatttggtcccttaacttattt 39110105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 461
Target Start/End: Original strand, 36099292 - 36099326
Alignment:
Q  427 aggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||| |||||||||||||||||||||||    
T  36099292 aggcttaattactcatttggtcccttaacttattt 36099326  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 7182761 - 7182724
Alignment:
Q  424 ttaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||||| || ||||||||||||||||||||    
T  7182761 ttaaggcttaattactcgtttggtcccttaacttattt 7182724  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 18905072 - 18905035
Alignment:
Q  424 ttaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||||| || ||||||||||||||||||||    
T  18905072 ttaaggcttaattactcttttggtcccttaacttattt 18905035  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 19105669 - 19105624
Alignment:
Q  417 atttaaatta-aggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||    
T  19105669 atttaaattataggcttaattactcttttggtcccttaacttattt 19105624  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 18786841 - 18786909
Alignment:
Q  84 taaattaatatgttgatgagaatgttgagttggcttaagttgtgtgtttgtttcatatgcatgcataat 152  Q
    ||||||||||| ||||||||||||  |||||  ||| |||| |||| ||| |||| |||||||||||||    
T  18786841 taaattaatattttgatgagaatgccgagtttactttagttttgtgcttgattcacatgcatgcataat 18786909  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 22151918 - 22151886
Alignment:
Q  429 gcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||| |||||||||||||||||||||||    
T  22151918 gcttaattactcatttggtcccttaacttattt 22151886  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 22207833 - 22207801
Alignment:
Q  429 gcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||| |||||||||||||||||||||||    
T  22207833 gcttaattactcatttggtcccttaacttattt 22207801  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 461
Target Start/End: Complemental strand, 36701801 - 36701765
Alignment:
Q  425 taaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||| || ||||||||||||||||||||    
T  36701801 taaggcttaattactcttttggtcccttaacttattt 36701765  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 6132312 - 6132271
Alignment:
Q  420 taaattaaggcttaattagtcatttggtcccttaacttattt 461  Q
    |||||||||||||||||| || |||||| |||||||||||||    
T  6132312 taaattaaggcttaattactcttttggttccttaacttattt 6132271  T

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Target: scaffold0295 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 461
Target Start/End: Complemental strand, 8277 - 8241
Alignment:
Q  425 taaggcttaattagtcatttggtcccttaacttattt 461  Q
    ||||||||||||| || ||||||||||||||||||||    
T  8277 taaggcttaattactcttttggtcccttaacttattt 8241  T

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