View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19813_high_33 (Length: 288)

Name: NF19813_high_33
Description: NF19813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19813_high_33
NF19813_high_33
[»] chr5 (20 HSPs)
chr5 (38-172)||(31080889-31081024)
chr5 (192-276)||(27904713-27904801)
chr5 (195-266)||(22300600-22300673)
chr5 (199-266)||(31080480-31080549)
chr5 (170-212)||(31080747-31080789)
chr5 (193-276)||(12406038-12406125)
chr5 (194-251)||(39049015-39049074)
chr5 (199-266)||(3333695-3333764)
chr5 (199-266)||(3999089-3999158)
chr5 (199-276)||(19131730-19131809)
chr5 (190-254)||(19340758-19340824)
chr5 (185-276)||(2974863-2974959)
chr5 (195-266)||(35166296-35166368)
chr5 (190-227)||(24779557-24779594)
chr5 (197-226)||(39574240-39574269)
chr5 (184-266)||(20629724-20629810)
chr5 (197-266)||(32391720-32391791)
chr5 (194-266)||(34319958-34320032)
chr5 (198-266)||(37897958-37898029)
chr5 (196-245)||(40132904-40132955)
[»] chr1 (8 HSPs)
chr1 (191-266)||(25085394-25085471)
chr1 (195-276)||(3377500-3377585)
chr1 (196-266)||(14978797-14978869)
chr1 (200-251)||(6320562-6320615)
chr1 (193-227)||(18216683-18216717)
chr1 (195-276)||(39642199-39642284)
chr1 (190-227)||(23220844-23220881)
chr1 (198-251)||(18632596-18632651)
[»] chr8 (14 HSPs)
chr8 (191-266)||(20853373-20853449)
chr8 (192-266)||(27545340-27545414)
chr8 (192-276)||(32071245-32071329)
chr8 (192-276)||(41487440-41487527)
chr8 (192-276)||(6807169-6807255)
chr8 (196-266)||(9762441-9762513)
chr8 (191-245)||(29657961-29658017)
chr8 (195-276)||(41487199-41487284)
chr8 (198-266)||(26823828-26823899)
chr8 (195-266)||(35213030-35213101)
chr8 (195-266)||(17070906-17070979)
chr8 (195-266)||(17577293-17577366)
chr8 (191-266)||(45515928-45516005)
chr8 (199-275)||(25896993-25897073)
[»] chr3 (14 HSPs)
chr3 (196-266)||(33329611-33329685)
chr3 (191-276)||(51315714-51315803)
chr3 (194-254)||(14349362-14349424)
chr3 (190-266)||(36677518-36677596)
chr3 (190-266)||(36687600-36687678)
chr3 (195-266)||(28712703-28712776)
chr3 (194-266)||(28204478-28204550)
chr3 (194-266)||(3193023-3193097)
chr3 (191-226)||(38958127-38958162)
chr3 (199-266)||(43747282-43747351)
chr3 (199-276)||(44586016-44586097)
chr3 (192-266)||(46226931-46227005)
chr3 (192-266)||(28944207-28944283)
chr3 (193-242)||(48348252-48348303)
[»] chr6 (9 HSPs)
chr6 (195-266)||(30349348-30349421)
chr6 (185-266)||(12766456-12766539)
chr6 (194-276)||(3579593-3579678)
chr6 (191-276)||(10727424-10727513)
chr6 (191-266)||(238925-239000)
chr6 (191-276)||(20474935-20475023)
chr6 (194-266)||(33399784-33399857)
chr6 (197-266)||(6036901-6036971)
chr6 (186-226)||(10727180-10727220)
[»] chr4 (18 HSPs)
chr4 (198-276)||(1420537-1420618)
chr4 (195-266)||(23759560-23759633)
chr4 (199-262)||(3658170-3658235)
chr4 (195-276)||(21957538-21957621)
chr4 (191-226)||(34771267-34771302)
chr4 (196-276)||(49185571-49185654)
chr4 (191-276)||(35393899-35393988)
chr4 (197-252)||(35615315-35615372)
chr4 (197-266)||(21957708-21957780)
chr4 (199-266)||(27978695-27978764)
chr4 (196-254)||(50769615-50769675)
chr4 (195-266)||(51371705-51371778)
chr4 (200-276)||(14060760-14060838)
chr4 (198-266)||(21871628-21871696)
chr4 (198-266)||(21927489-21927557)
chr4 (195-268)||(29697761-29697836)
chr4 (185-266)||(42525954-42526037)
chr4 (193-266)||(53924744-53924819)
[»] chr2 (12 HSPs)
chr2 (195-276)||(14489213-14489297)
chr2 (194-247)||(6592722-6592777)
chr2 (190-266)||(14489453-14489530)
chr2 (199-276)||(6510230-6510310)
chr2 (195-276)||(43028793-43028877)
chr2 (196-266)||(4576784-4576854)
chr2 (194-266)||(5470578-5470651)
chr2 (195-274)||(34679096-34679178)
chr2 (191-266)||(44297558-44297634)
chr2 (196-266)||(15023080-15023152)
chr2 (194-266)||(19206140-19206213)
chr2 (194-226)||(32969811-32969843)
[»] chr7 (11 HSPs)
chr7 (193-262)||(35250116-35250187)
chr7 (190-254)||(14247555-14247620)
chr7 (191-276)||(6792026-6792115)
chr7 (191-276)||(20505241-20505328)
chr7 (195-248)||(11373846-11373901)
chr7 (197-266)||(28472391-28472460)
chr7 (194-266)||(41243642-41243716)
chr7 (192-251)||(4049702-4049763)
chr7 (199-266)||(20185158-20185226)
chr7 (195-276)||(4049952-4050036)
chr7 (195-248)||(15347953-15348008)
[»] scaffold0515 (1 HSPs)
scaffold0515 (194-266)||(3637-3712)
[»] scaffold0306 (1 HSPs)
scaffold0306 (194-266)||(3637-3712)
[»] scaffold0166 (1 HSPs)
scaffold0166 (190-227)||(21940-21977)


Alignment Details
Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 31081024 - 31080889
Alignment:
Q  38 cccttttgaaaagattgtccttcatgactattttattttgcatcattgtccaatcaaacaccaagata-tctacctacctgaaaaaactatcaatacatt 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  31081024 cccttttgaaaagattgtccttcatgactattttattttgcatcattgtccaatcaaacaccaagatattctacccacctgaaaaaactatcaatacatt 31080925  T
Q  137 caagggaacaatattattctaaaactcacactccca 172  Q
    |||||||||| |||||||||||||||||||||||||    
T  31080924 caagggaacagtattattctaaaactcacactccca 31080889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 27904801 - 27904713
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||| ||||||||||||||   |||||||||||||| |||| ||| ||| |||||||| |||||||||||||    
T  27904801 tttaggcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgcccccta 27904713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 22300600 - 22300673
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||| |||||| |||||||||||||||  |||||||||||||| | || |||||| |||||||||||    
T  22300600 aggcttaatagtagttttagccctctaacttttctaaagttgcgattttggcaccctaaaaaaaaaactacaaa 22300673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 31080480 - 31080549
Alignment:
Q  199 ttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||| ||||||| |||||||||||||||  ||||||||||||||||| | |||||| |||||||||||    
T  31080480 ttaatatcagttttagccctctaacttttccaaagttgcgattttgacctcctaaaaaaaaaactacaaa 31080549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 31080789 - 31080747
Alignment:
Q  170 ccattatatgtgatcaatacattttaggcttaatagcagtttt 212  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  31080789 ccattatatgtgatcaatacattttaggcttaatagcaatttt 31080747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 12406038 - 12406125
Alignment:
Q  193 ttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||||||||| |||| |||||||| |  |||||||||||||| |||| ||| ||| |||||||| |||||||||||||    
T  12406038 ttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaagaaaactacaaaaccgcccccta 12406125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 39049015 - 39049074
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttcaa--gttgcgattttgaccccttaa 251  Q
    |||||||||| |||||||| |||||||| ||||||||  |||||||||||||||||||||    
T  39049015 taggcttaattgcagttttggccctctatcttttcaaaagttgcgattttgaccccttaa 39049074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 3333695 - 3333764
Alignment:
Q  199 ttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||| ||| ||| || |||||||||||    
T  3333695 ttaatagcagttttcgccccctaactttcatgaagttgcgattttgatcccctaagaaaaaaactacaaa 3333764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 3999089 - 3999158
Alignment:
Q  199 ttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||| ||||||||    ||||||||||||||||||| ||| || |||||||||||    
T  3999089 ttaatagcagttttcgccccctaactttcacgaagttgcgattttgaccccctaagaaaaaaactacaaa 3999158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 19131809 - 19131730
Alignment:
Q  199 ttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||| | |||||||||||||  |||||||||||||  |||| |||||| |||||||| |||||||||||||    
T  19131809 ttaatagcagttttagtcctctaacttttctaaagttgcgatttttgccccctaaaaa-aaaactacaaaaccgcccccta 19131730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 19340758 - 19340824
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaa 254  Q
    |||| ||| |||||||||||||| |||| ||||||||||  || |||||||||||||||| ||||||    
T  19340758 atttaaggtttaatagcagttttagccccctaacttttccaaaattgcgattttgaccccctaaaaa 19340824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 2974959 - 2974863
Alignment:
Q  185 aatacattttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaa--aaataaaactaca-aaccgcccccta 276  Q
    |||| ||||||||||||||||||||||| |||| ||||||||    |||||||||||||| ||||  ||  ||| ||||||||| ||||||||||||    
T  2974959 aatagattttaggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccccaaggaaaaaaaactacagaaccgcccccta 2974863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 35166296 - 35166368
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||| ||| | |||||||||  || |||||||||||||||| ||| || |||||||||||    
T  35166296 aggcttaatagcagttttagcctt-taacttttccaaaattgcgattttgaccccctaagaaaaaaactacaaa 35166368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 24779594 - 24779557
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaactttt 227  Q
    ||||||||||||||||||||||||| || |||||||||    
T  24779594 attttaggcttaatagcagttttcgtcccctaactttt 24779557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 39574240 - 39574269
Alignment:
Q  197 gcttaatagcagttttcgccctctaacttt 226  Q
    ||||||||||||||||||||||||||||||    
T  39574240 gcttaatagcagttttcgccctctaacttt 39574269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 20629724 - 20629810
Alignment:
Q  184 caatacattttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgacccctta--aaaataaaactacaaa 266  Q
    ||||| |||||||| |||||||||||||||||||  |||||||    ||||||||||||| ||||| ||  |||| |||||||||||    
T  20629724 caatatattttaggtttaatagcagttttcgccccttaactttcacaaagttgcgattttaaccccctaagaaaaaaaaactacaaa 20629810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 32391720 - 32391791
Alignment:
Q  197 gcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||||||  |||||||    |||||| ||||||| |||||||| || |||||||||||    
T  32391720 gcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccttaagaaaaaaactacaaa 32391791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 34319958 - 34320032
Alignment:
Q  194 taggcttaatagcagttttcgccctctaactt--ttcaagttgcgattttgaccccttaa-aaataaaactacaaa 266  Q
    ||||| |||||||||||||||||| |||||||  || |||||||||||||| |||| ||| ||| |||||||||||    
T  34319958 taggcataatagcagttttcgccc-ctaactttcttgaagttgcgattttggccccctaagaaaaaaaactacaaa 34320032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 37898029 - 37897958
Alignment:
Q  198 cttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaa-aaataaaactacaaa 266  Q
    ||||||||||||||| |||| |||||||||   |||||||||||||| |||| ||| ||| |||||||||||    
T  37898029 cttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaa 37897958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 40132904 - 40132955
Alignment:
Q  196 ggcttaatagcagttttcgccctctaactttt--caagttgcgattttgacc 245  Q
    ||||||||||||||||| | ||||||||||||   |||||||||||||||||    
T  40132904 ggcttaatagcagttttagtcctctaactttttcaaagttgcgattttgacc 40132955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 25085394 - 25085471
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||||||||||| ||||||||  | |||||||||||||||||||| | ||| |||||||||||    
T  25085394 ttttaggcttaatagcagttttcgccccctaactttcataaagttgcgattttgacccctaagaaaaaaaactacaaa 25085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 3377500 - 3377585
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||||||| |||| ||| ||| |||||||| |||||||||||||    
T  3377500 aggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccccta 3377585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 14978797 - 14978869
Alignment:
Q  196 ggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||| |||| ||||||||||  ||||||||||||||   |||| |||| |||||||||||    
T  14978797 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttgggtccttcaaaaaaaaactacaaa 14978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 6320562 - 6320615
Alignment:
Q  200 taatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa 251  Q
    |||| |||||||| |||||||||||||||  |||||||||||||| ||||||||    
T  6320562 taattgcagttttagccctctaacttttctaaagttgcgattttggccccttaa 6320615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 18216683 - 18216717
Alignment:
Q  193 ttaggcttaatagcagttttcgccctctaactttt 227  Q
    |||||||||||| ||||||||||||||||||||||    
T  18216683 ttaggcttaataacagttttcgccctctaactttt 18216717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 39642199 - 39642284
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccc-cttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||||| ||||||||    |||||||||||||| ||| || || || |||||||| |||||||||||||    
T  39642199 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaaaaactacaaaaccgcccccta 39642284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 23220881 - 23220844
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaactttt 227  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  23220881 attttaggcttgatagcagttttcgccccctaactttt 23220844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 18632651 - 18632596
Alignment:
Q  198 cttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaa 251  Q
    |||||||||||||||||||| |||||||||   |||||||||||||| || |||||    
T  18632651 cttaatagcagttttcgccccctaacttttacgaagttgcgattttggcctcttaa 18632596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 20853373 - 20853449
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaactt--ttcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||||||| |||| |||||||  || ||||||||||||||||||| |||||| |||||||||||    
T  20853373 ttttaggcttaatagcagttttagccccctaactttcttgaagttgcgattttgaccccctaaaaa-aaaactacaaa 20853449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 27545340 - 27545414
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||||| ||| |||||||||||  |||||||||||| |||||| |||||  |||||||||||    
T  27545340 tttaggcttaatagcagttttagccgtctaacttttccaaagttgcgatttcgaccccctaaaa--aaaactacaaa 27545414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 32071329 - 32071245
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||  || | |||||||| |||||||||||||    
T  32071329 tttaggcttaatagcagttttagccc-ctaacttttctaaagttgcgattttgacccct--aagaaaaaactacaaaaccgcccccta 32071245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 41487527 - 41487440
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||||||||| | ||||||| ||| |||||||| |||||||||||||    
T  41487527 tttaggtttaatagcagttttagccctctaacttttccaaagttgcgatttt-agcccttaagaaaaaaaactacaaaaccgcccccta 41487440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 6807169 - 6807255
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaacttt-tc-aagttgcgattttgaccccttaaaaataaaactacaaaccgcccccta 276  Q
    |||||||||||||| |||||| ||||  ||||||| || |||||||||||||| |||| ||| || ||||||||||||| |||||||    
T  6807169 tttaggcttaatagtagtttttgccccataactttctcgaagttgcgattttggccccctaagaaaaaaactacaaaccacccccta 6807255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 9762513 - 9762441
Alignment:
Q  196 ggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||| ||||||||  |||||||||   |||||||||||||| |||||| |||| |||||||||||    
T  9762513 ggcttaatagcaattttcgccacctaacttttacgaagttgcgattttggccccttgaaaaaaaaactacaaa 9762441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 29658017 - 29657961
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgacc 245  Q
    ||||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||    
T  29658017 ttttaggtttaatagcagttttcgctccctaactttcatcaagttgcgattttgacc 29657961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 41487199 - 41487284
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc---aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||||| | || |||||   ||||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  41487199 aggcttaatagcagttttcgcccccgaa-ttttcacgaagttgcgattttgaccccctaagaaacaaaactacaaaaccgcccccta 41487284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 26823828 - 26823899
Alignment:
Q  198 cttaatagcagttttcgccctctaacttt-tc-aagttgcgattttgaccccttaa-aaataaaactacaaa 266  Q
    |||||||||||||||  |||||||||||| || ||||| ||||||||||||||||| ||| |||||||||||    
T  26823828 cttaatagcagttttaaccctctaactttctcaaagttacgattttgaccccttaagaaaaaaaactacaaa 26823899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 35213030 - 35213101
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||| |||||||||| ||||||||    ||||||||||||||||||| |||||  |||||||||||    
T  35213030 aggcttaatagcggttttcgcccactaactttgacaaagttgcgattttgaccccctaaaa--aaaactacaaa 35213101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 17070906 - 17070979
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||||||||  |||||||    |||||||||||||| |||| |||||| ||||| |||||    
T  17070906 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaaaacaacaaa 17070979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 17577366 - 17577293
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||||||||  |||||||    |||||||||||||| |||| |||||| ||||| |||||    
T  17577366 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaaaacaacaaa 17577293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 45515928 - 45516005
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||| |||||||| ||||  ||| ||||   ||||||||||||||| ||| |||||| |||||||||||    
T  45515928 ttttaggcttaattgcagttttagccccttaattttttcaaagttgcgattttgaacccctaaaaaaaaaactacaaa 45516005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 25896993 - 25897073
Alignment:
Q  199 ttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaa-aaataaaactac-aaaccgccccct 275  Q
    |||||||||||||| |||| |||||||||   |||||||||||||| |||| ||| ||| |||||||| ||||||||||||    
T  25896993 ttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaacaaaaaaaactacaaaaccgccccct 25897073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 33329611 - 33329685
Alignment:
Q  196 ggcttaatagcagttttcgccctctaactttt--caagttgcgattttgacccctta--aaaataaaactacaaa 266  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||  |||| |||||||||||    
T  33329611 ggcttaatagcagttttcgccctctaacttttacgaagttgcgattttgaccccctaagaaaaaaaaactacaaa 33329685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 51315803 - 51315714
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||||||||||| |||| |||||||| |  |||||||||||||| |||| ||| ||| |||||||| |||||||||||||    
T  51315803 ttttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccccta 51315714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 14349424 - 14349362
Alignment:
Q  194 taggcttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaaaaa 254  Q
    |||||||||||||||||||||||| |||||||||   ||||||||||||| ||||| ||||||    
T  14349424 taggcttaatagcagttttcgccccctaacttttacgaagttgcgattttaaccccctaaaaa 14349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 36677518 - 36677596
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||| |||||||||||| ||||||||    |||||||||||||| | || |||||| |||||||||||    
T  36677518 attttaggcttaataacagttttcgcccgctaactttcacgaagttgcgattttggctccctaaaaaaaaaactacaaa 36677596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 36687600 - 36687678
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||| |||||||||||| ||||||||    |||||||||||||| | || |||||| |||||||||||    
T  36687600 attttaggcttaataacagttttcgcccgctaactttcacgaagttgcgattttggctccctaaaaaaaaaactacaaa 36687678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 28712776 - 28712703
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||||||| ||||||||  | |||||| ||||||| |||| ||| || |||||||||||    
T  28712776 aggcttaatagcagttttcgccccctaacttttatgaagttgtgattttggccccctaagaaaaaaactacaaa 28712703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 28204478 - 28204550
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||||||||  |||||||    ||||||||||||||||||| |||||  |||||||||||    
T  28204478 taggcttaatagcagttttcgccccttaactttcacgaagttgcgattttgaccccctaaaa--aaaactacaaa 28204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 3193097 - 3193023
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||||| ||| ||||||||    ||||||||||||||||||| ||| || |||||| ||||    
T  3193097 taggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgaccccctaagaaaaaaacttcaaa 3193023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 38958162 - 38958127
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  38958162 ttttaggcttaatagcagttttcgccccctaacttt 38958127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 43747282 - 43747351
Alignment:
Q  199 ttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||| ||| ||||||||   |||||||||||||| |||| ||| || |||||||||||    
T  43747282 ttaatagcagttttcgtcctataacttttacgaagttgcgattttggccccctaagaaaaaaactacaaa 43747351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 44586097 - 44586016
Alignment:
Q  199 ttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||| |||| |||||||| |  |||||||||||||| |||| ||| ||| |||||||| |||||||||||||    
T  44586097 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccccta 44586016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 46227005 - 46226931
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||| |||||||||||||||| || ||||||||    ||||||||||||||||||| |||||  |||||||||||    
T  46227005 tttaggattaatagcagttttcgtcccctaactttcacgaagttgcgattttgaccccctaaaa--aaaactacaaa 46226931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 28944283 - 28944207
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||||| | || |||||||||   |||||||||||||| || | ||| || |||||||||||    
T  28944283 tttaggcttaatagcagtttttgtcccctaacttttactaagttgcgattttggcctcataagaaaaaaactacaaa 28944207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 48348252 - 48348303
Alignment:
Q  193 ttaggcttaatagcagttttcgccctctaactttt--caagttgcgattttg 242  Q
    |||| |||||||||||||||||||| |||||||||   ||||||||||||||    
T  48348252 ttagacttaatagcagttttcgccccctaacttttacgaagttgcgattttg 48348303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 30349348 - 30349421
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||| ||||||||||||| |  ||||||||||||||| ||| ||| || |||||||||||    
T  30349348 aggcttaatagcagttttagccctctaactttcccaaagttgcgattttgagcccctaagaaaaaaactacaaa 30349421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 12766539 - 12766456
Alignment:
Q  185 aatacattttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||| |||| ||||||||||||||||||| ||| ||||||||    |||||||||||||| |||| |||||| |||||||||||    
T  12766539 aatatatttaaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggccccctaaaaaaaaaactacaaa 12766456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 3579593 - 3579678
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||| ||  |||||||    |||||||||||||| |||| |||||| |||||||| |||||||||||||    
T  3579593 taggcttaatagcagttttcgtcccttaactttcacgaagttgcgattttggccccgtaaaaaaaaaactacaaaaccgcccccta 3579678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 10727513 - 10727424
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||||| ||||||||||||| |||| ||||||||||  |||||| ||||||| |||| ||| ||| |||||||| |||||||||||||    
T  10727513 ttttaggcataatagcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactacaaaaccgcccccta 10727424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 238925 - 239000
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc---aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||||||||||| |||| |||||   ||||||||||||||||| | |||||  |||||||||||    
T  238925 ttttaggcttaatagcagttttcgccccctaa-ttttcacgaagttgcgattttgacctcctaaaa--aaaactacaaa 239000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 20475023 - 20474935
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactacaaaccgcccccta 276  Q
    |||| ||| |||||||| |||| |||| |||||||||   ||||||||||||||| ||||||| ||| ||||||||||| |||||||||    
T  20475023 tttttggcataatagcaattttagccccctaactttttcaaagttgcgattttgatcccttaagaaaaaaaactacaaaacgcccccta 20474935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 33399784 - 33399857
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||| |||| ||||||||||  |||||||||||||| |||  ||| || |||||||||||    
T  33399784 taggcttaatagcagttttagccc-ctaacttttccaaagttgcgattttggccctctaagaaaaaaactacaaa 33399857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 6036971 - 6036901
Alignment:
Q  197 gcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||||| || | ||| || |||||||||||    
T  6036971 gcttaatagcagttttagccc-ctaacttttctaaagttgcgattttggcctcctaagaagaaaactacaaa 6036901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 10727180 - 10727220
Alignment:
Q  186 atacattttaggcttaatagcagttttcgccctctaacttt 226  Q
    |||| ||||||||||||||||||||||||||  ||||||||    
T  10727180 atactttttaggcttaatagcagttttcgcctcctaacttt 10727220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 1420537 - 1420618
Alignment:
Q  198 cttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||| |||| ||||||||||  |||||||||||||| || | |||||| |||||||| |||||||||||||    
T  1420537 cttaatagcagttttagccccctaacttttccaaagttgcgattttggcctcctaaaaaaaaaactacaaaaccgcccccta 1420618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 23759560 - 23759633
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||| ||||||||||| ||||||||  | |||||||||||||| |||||||| || |||||||||||    
T  23759560 aggcttaatagtagttttcgccccctaactttcataaagttgcgattttggccccttaagaaaaaaactacaaa 23759633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 3658235 - 3658170
Alignment:
Q  199 ttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaacta 262  Q
    |||||||||||||||| |||||||||||  | ||||||||||||||| ||||||| || |||||||    
T  3658235 ttaatagcagttttcgtcctctaacttttatgaagttgcgattttgatcccttaagaaaaaaacta 3658170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 21957538 - 21957621
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt-tcaa-gttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    |||||||||| ||||||| || | |||||||| |||| ||||||||||||||||| |||||| |||||||| |||||||||||||    
T  21957538 aggcttaatatcagttttagctccctaactttctcaaagttgcgattttgaccccctaaaaa-aaaactacaaaaccgcccccta 21957621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 34771267 - 34771302
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttt 226  Q
    |||||||||||||| |||||||||||||||||||||    
T  34771267 ttttaggcttaataacagttttcgccctctaacttt 34771302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 49185571 - 49185654
Alignment:
Q  196 ggcttaatagcagttttcgccctctaacttt-tcaagttgcgattttgaccccttaa-aaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||||||| |||| ||| ||| |||||||| |||||||||||||    
T  49185571 ggcttaatagcagttttaaccccctaactttcccaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccccta 49185654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 35393988 - 35393899
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgatttt-gaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||||| ||| ||||||||    ||||||||||||| |||| || | ||| |||||||| |||||||||||||    
T  35393988 ttttaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggacctctaagaaaaaaaactacaaaaccgcccccta 35393899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 35615315 - 35615372
Alignment:
Q  197 gcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaa 252  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||||| |||| ||||    
T  35615315 gcttaatagcagttttagccccctaacttttctaaagttgcgattttggccccctaaa 35615372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 21957780 - 21957708
Alignment:
Q  197 gcttaatagcagttttcgccctctaacttttc--aagttgcgattttgacccctta-aaaataaaactacaaa 266  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||||| || || | |||| |||||||||||    
T  21957780 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggcctctaagaaaaaaaaactacaaa 21957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 27978695 - 27978764
Alignment:
Q  199 ttaatagcagttttcgccctctaacttt-tcaa-gttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||  ||||||||||||| |||| ||||||||||||||||| ||| || |||| ||||||    
T  27978695 ttaatagcagtttaagccctctaactttctcaaagttgcgattttgaccccctaagaaaaaaattacaaa 27978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 50769675 - 50769615
Alignment:
Q  196 ggcttaatagcagttttcgccctctaactttt--caagttgcgattttgaccccttaaaaa 254  Q
    ||||||| |||||||||||||| |||||||||   |||||||||||||| |||| ||||||    
T  50769675 ggcttaaaagcagttttcgccccctaacttttacgaagttgcgattttggccccctaaaaa 50769615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 51371778 - 51371705
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt-tc-aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||| ||||||||||| |||||||| || ||||||||||||||  ||||| |||| ||||| |||||    
T  51371778 aggcttaatagtagttttcgccccctaactttctcgaagttgcgattttggtccctttaaaaaaaaacaacaaa 51371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 14060760 - 14060838
Alignment:
Q  200 taatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||  ||| |||||||||   ||||||||||||||||||| ||| || |||||||| |||||||||||||    
T  14060760 taatagcagttttaaccccctaactttttcaaagttgcgattttgaccccctaagaa-aaaactacaaaaccgcccccta 14060838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 21871696 - 21871628
Alignment:
Q  198 cttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||| |||| |||| |||||||||   ||||||||||||||||||| |||||  |||||||||||    
T  21871696 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaa--aaaactacaaa 21871628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 21927557 - 21927489
Alignment:
Q  198 cttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||| |||| |||| |||||||||   ||||||||||||||||||| |||||  |||||||||||    
T  21927557 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaa--aaaactacaaa 21927489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 29697836 - 29697761
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaacc 268  Q
    ||||||||||||||||||| ||  ||||||||  | ||||||||||||||  |||| | ||| |||||||||||||    
T  29697836 aggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggtccctaagaaaaaaaactacaaacc 29697761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 42525954 - 42526037
Alignment:
Q  185 aatacattttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||| |||| |||||||||||| |||| || | |||| ||||   ||||||| |||||| ||||||||||| |||||||||||    
T  42525954 aatacttttttggcttaatagcaattttagctccctaatttttttaaagttgcaattttggccccttaaaaaaaaaactacaaa 42526037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 53924744 - 53924819
Alignment:
Q  193 ttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||| |||| |||||| ||||||||    |||||| |||||||||||||||| || |||| ||||||    
T  53924744 ttaggcttaatagtagttctcgccccctaactttcacgaagttgtgattttgaccccttaagaaaaaaattacaaa 53924819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 14489213 - 14489297
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||||||| ||||||||||||| |  |||||| ||||||| |||||||| || |||| ||| |||||||||||||    
T  14489213 aggcttaatagcagttttagccctctaactttccaaaagttgtgattttggccccttaagaaaaaaattacaaaaccgcccccta 14489297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 6592722 - 6592777
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgacccc 247  Q
    ||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||    
T  6592722 taggcttaatagcagttttagccccctaacttttccaaagttgcgattttgacccc 6592777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 14489530 - 14489453
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||||||||||||||| ||||||||    |||||||||||||| |||| ||| || |||||||||||    
T  14489530 attttaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccc-taagaaaaaaactacaaa 14489453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 6510310 - 6510230
Alignment:
Q  199 ttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||||||||||||||||||||||||  | |||||||||||||| | || ||| || ||| |||| |||||||||||||    
T  6510310 ttaatagcagttttcgccctctaactttcatgaagttgcgattttggcaccctaagaaaaaagctacaaaaccgcccccta 6510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 43028793 - 43028877
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactacaaaccgcccccta 276  Q
    |||||||||||||||||| |||| ||||||| ||  |||||||||||||| |||| ||| ||| ||||||||||| | |||||||    
T  43028793 aggcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaacccccccta 43028877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 4576854 - 4576784
Alignment:
Q  196 ggcttaatagcagttttcgccctctaacttttcaa-gttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||| | || |||||||| ||| |||||||||||| |||||||| || |||||||||||    
T  4576854 ggcttaatagcagttttagacccctaactttccaaagttgcgattttggccccttaataa-aaaactacaaa 4576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 5470651 - 5470578
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||| ||||||||||| |||| ||||||||  | |||||||||||||| |||| |||||| |||||||||||    
T  5470651 taggctttatagcagttttagccccctaactttcctaaagttgcgattttggccccctaaaaa-aaaactacaaa 5470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 34679096 - 34679178
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactac-aaaccgccccc 274  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||||||| || | ||| || |||| ||| |||||||||||    
T  34679096 aggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaaaattacaaaaccgccccc 34679178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 44297558 - 44297634
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||| |||| |||  |||| |||||  |||||||||||||| |||| |||||| |||||||||||    
T  44297558 ttttaggcttaatagcacttttagcctcctaatttttcaaaagttgcgattttggccccctaaaaa-aaaactacaaa 44297634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 15023152 - 15023080
Alignment:
Q  196 ggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||| |||| ||||||||    |||||| |||||||||||| ||| || |||||||||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgaccccctaagaaaaaaactacaaa 15023080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 19206140 - 19206213
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc---aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||| ||||||||| |||| |||||   |||||||||||||| |||| |||||| |||||||||||    
T  19206140 taggcttaatagcaattttcgccccctaa-ttttcacaaagttgcgattttggccccctaaaaa-aaaactacaaa 19206213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 32969843 - 32969811
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttt 226  Q
    |||||||||||||||||||||||| ||||||||    
T  32969843 taggcttaatagcagttttcgccccctaacttt 32969811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 35250116 - 35250187
Alignment:
Q  193 ttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaacta 262  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||||  ||||||| || |||||||    
T  35250116 ttaggcttaatagtagttttagccctctaacttttccaaagttgcgattttggtcccttaagaaaaaaacta 35250187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 14247620 - 14247555
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaa 254  Q
    |||||||||||||||||||||||  ||| ||||||||||  |||||||||||| |||||||||||||    
T  14247620 attttaggcttaatagcagttttatccc-ctaacttttccaaagttgcgatttcgaccccttaaaaa 14247555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 6792115 - 6792026
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttttc--aagttgcgatttt-gaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    ||||||| |||||||||||||| |||| ||||||||||  ||||||||||||| | ||||| | ||| |||||||| |||||||||||||    
T  6792115 ttttaggtttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgcccccta 6792026  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 20505328 - 20505241
Alignment:
Q  191 ttttaggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    |||| |||||||||||||||||| ||| ||| ||||  | |||||||||||||| |||| |||||| |||||||| |||||||||||||    
T  20505328 tttttggcttaatagcagttttcaccccctagcttttatgaagttgcgattttggccccctaaaaa-aaaactacaaaaccgcccccta 20505241  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 11373846 - 11373901
Alignment:
Q  195 aggcttaatagcagttttcgccctctaactttt--caagttgcgattttgacccct 248  Q
    ||||||||||||||||||||||| |||||||||   |||||||||| |||||||||    
T  11373846 aggcttaatagcagttttcgccccctaacttttacgaagttgcgatcttgacccct 11373901  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 28472391 - 28472460
Alignment:
Q  197 gcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||||||||| ||| || |||||||||||    
T  28472391 gcttaatagcagttttagccc-ctaacttttccaaagttgcgattttgaccccctaagaa-aaaactacaaa 28472460  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 41243642 - 41243716
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||| |||||  |||| ||| || |||||||||||    
T  41243642 taggcttaatagcagttttagccccctaacttttccaaagttgcaattttagccccctaagaaaaaaactacaaa 41243716  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 4049702 - 4049763
Alignment:
Q  192 tttaggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa 251  Q
    |||||| |||| ||||||||| |||| ||||||||||  |||||||||||||| ||||||||    
T  4049702 tttaggtttaacagcagttttagcccactaacttttctaaagttgcgattttggccccttaa 4049763  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 20185226 - 20185158
Alignment:
Q  199 ttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaaaaataaaactacaaa 266  Q
    ||||||| ||||||||||| ||||||||    ||||||||||||||||||| |||||| |||||||||||    
T  20185226 ttaatagtagttttcgccccctaactttcacgaagttgcgattttgaccccctaaaaa-aaaactacaaa 20185158  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 4050036 - 4049952
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgaccccttaaaaataaaactac-aaaccgcccccta 276  Q
    |||||||||||||||||||||||  |||||||    |||||| ||||||| |||| ||| || |||||||| |||||||||||||    
T  4050036 aggcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgcccccta 4049952  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15347953 - 15348008
Alignment:
Q  195 aggcttaatagcagttttcgccctctaacttt--tcaagttgcgattttgacccct 248  Q
    |||||||||||| ||||| |||| ||||||||  | ||||||||||||||||||||    
T  15347953 aggcttaatagccgttttagccccctaactttcctaaagttgcgattttgacccct 15348008  T

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Target: scaffold0515 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 3637 - 3712
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactacaaa 266  Q
    ||||||||||||||||||| |||| |||||||| |  |||||||||||||| |||| ||| ||| |||||||||||    
T  3637 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaa 3712  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 3637 - 3712
Alignment:
Q  194 taggcttaatagcagttttcgccctctaacttttc--aagttgcgattttgaccccttaa-aaataaaactacaaa 266  Q
    ||||||||||||||||||| |||| |||||||| |  |||||||||||||| |||| ||| ||| |||||||||||    
T  3637 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaa 3712  T

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Target: scaffold0166 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 21977 - 21940
Alignment:
Q  190 attttaggcttaatagcagttttcgccctctaactttt 227  Q
    ||||||||||||||||||||||||| || |||||||||    
T  21977 attttaggcttaatagcagttttcgtcccctaactttt 21940  T

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