View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19813_low_14 (Length: 428)
Name: NF19813_low_14
Description: NF19813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19813_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 16 - 413
Target Start/End: Complemental strand, 33813055 - 33812657
Alignment:
| Q |
16 |
atgaaactgaaacctaggtaaaatattaatactattagggattttatatataaaaataaagtacgtggagtacagtattaggctttgctggaaattgggt |
115 |
Q |
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| T |
33813055 |
atgaaactgaaacctaggtaaaatattaatactattagggattttatatataaaaataaagtacgtggagtacagtattaggctttgctggaaattgggt |
33812956 |
T |
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| Q |
116 |
taatatgaagaggtggagattaatgttattaagaaatgaaattacgtaagagtcctttattatttcctaccctccacattttgagccatagtcaaaggaa |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
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| T |
33812955 |
taatatgaagaggtggagattaatgttattaagaaatgaaattacgtaagagtcctttattatttcctaccctcctcatttcgagccatagtcaaaggaa |
33812856 |
T |
|
| Q |
216 |
aatcaggcagtgtgagagtatattcttaaattgatagtttttgaaacaatgaatgttata-gttgatccaaatttcaaaggttttttatggttcgaatca |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
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| T |
33812855 |
aatcaggcagtgtgagagtatattcttaaattgatagtttttgaaacaatgaatgttagaggttgatccaaatttcaaaggttttttatggttcgaatca |
33812756 |
T |
|
| Q |
315 |
acaaggctcttgcaatggatccttacgaatgatcatgaatcagagaatctttgattacctattgtagtgcaaatcctttgatcgatgaaggttggtagt |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||| |
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| T |
33812755 |
acaaggctcttgcaatggatccttacgaatgatcatgaatcagagaatgtttgattatctattgtagtgcaaatcctttgaacgacgaaggttggtagt |
33812657 |
T |
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