View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19813_low_50 (Length: 245)
Name: NF19813_low_50
Description: NF19813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19813_low_50 |
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Alignment Details
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 5361548 - 5361406
Alignment:
| Q |
17 |
cataggctaaacacaattatataatttaaacaaatataaaccattacaaaaattgaagctcaaaggtaaccttatccttaaaatttattactaatacatc |
116 |
Q |
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| T |
5361548 |
cataggctaaacacaattatataatttaaacaaatataaaccattacaaatattgaagctcaaaggtaaccttatccttaaaatttattactaatacatc |
5361449 |
T |
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| Q |
117 |
agtgatatttcaatt-ttttcagtattagtcactaaacatcat |
158 |
Q |
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| T |
5361448 |
agtgatatttcaatttttttcagtattagtcactaaacatcat |
5361406 |
T |
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