View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19813_low_56 (Length: 233)
Name: NF19813_low_56
Description: NF19813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19813_low_56 |
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Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 13726160 - 13726359
Alignment:
| Q |
18 |
aaagcatcatagacaacacaatcaacagggttgtttgaactttgaagtttatgaagaagctgagaaagtgattttggtccaactttccagaaagtgtctt |
117 |
Q |
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| T |
13726160 |
aaagcatcatagacaacacaatcaacagggttgtttgaactttgaagtttatgaagaagctgagaaagtgattttggtccaactttccagaaagtgtctt |
13726259 |
T |
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| Q |
118 |
tgtaagattccatattttctgctgatgacattcctccattgtcataaccatctgaaatgctttcagtttgaattgaatttagatcaatgttgttgttgat |
217 |
Q |
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| T |
13726260 |
tgtaagattccatgttttctgctgatgacattcctccattgtcataaccatctgaaatgctttcagtttcaattgaattgagatcaatgttgttgttgat |
13726359 |
T |
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