View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19813_low_9 (Length: 493)

Name: NF19813_low_9
Description: NF19813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19813_low_9
NF19813_low_9
[»] chr8 (48 HSPs)
chr8 (89-231)||(22781890-22782032)
chr8 (89-219)||(2339298-2339428)
chr8 (89-215)||(33642466-33642592)
chr8 (89-232)||(29563666-29563809)
chr8 (89-232)||(34028391-34028534)
chr8 (80-219)||(41569106-41569245)
chr8 (89-232)||(2229067-2229210)
chr8 (92-219)||(25847978-25848105)
chr8 (88-219)||(27793204-27793335)
chr8 (96-219)||(42189818-42189941)
chr8 (109-232)||(43135072-43135195)
chr8 (109-231)||(8242251-8242373)
chr8 (89-219)||(37564641-37564771)
chr8 (109-230)||(30923920-30924041)
chr8 (109-218)||(40465249-40465358)
chr8 (79-219)||(11293197-11293337)
chr8 (89-218)||(43295074-43295202)
chr8 (92-219)||(32159044-32159171)
chr8 (89-215)||(12270070-12270196)
chr8 (89-219)||(41915602-41915732)
chr8 (95-231)||(25878170-25878305)
chr8 (92-219)||(34157671-34157799)
chr8 (92-219)||(7668202-7668329)
chr8 (87-232)||(3799713-3799859)
chr8 (116-218)||(40834171-40834273)
chr8 (89-219)||(45145877-45146003)
chr8 (89-233)||(42351194-42351338)
chr8 (89-219)||(33837588-33837719)
chr8 (91-230)||(29916537-29916676)
chr8 (129-230)||(16928840-16928941)
chr8 (89-219)||(36366033-36366162)
chr8 (174-230)||(10839762-10839818)
chr8 (109-232)||(35011209-35011331)
chr8 (87-144)||(32159040-32159097)
chr8 (174-218)||(8453687-8453731)
chr8 (111-146)||(6197905-6197940)
chr8 (78-145)||(6354731-6354798)
chr8 (89-144)||(41915679-41915734)
chr8 (89-219)||(35149676-35149806)
chr8 (89-143)||(45145951-45146005)
chr8 (87-144)||(11293193-11293250)
chr8 (89-146)||(25848050-25848107)
chr8 (89-149)||(7693113-7693173)
chr8 (80-144)||(24915254-24915318)
chr8 (80-144)||(29563743-29563807)
chr8 (80-144)||(30923920-30923984)
chr8 (92-144)||(40465249-40465301)
chr8 (80-144)||(43135129-43135193)
[»] chr4 (66 HSPs)
chr4 (229-360)||(22453534-22453665)
chr4 (89-234)||(36099495-36099640)
chr4 (80-219)||(31227270-31227409)
chr4 (89-232)||(23125654-23125797)
chr4 (89-219)||(5970289-5970419)
chr4 (89-219)||(31854389-31854519)
chr4 (89-215)||(38687925-38688051)
chr4 (91-219)||(19485582-19485710)
chr4 (91-218)||(47948949-47949076)
chr4 (89-219)||(39877411-39877541)
chr4 (87-232)||(18430250-18430397)
chr4 (92-232)||(55292109-55292249)
chr4 (90-217)||(2279533-2279660)
chr4 (89-232)||(4758774-4758917)
chr4 (89-219)||(35328947-35329077)
chr4 (90-219)||(2385205-2385334)
chr4 (89-219)||(53621338-53621468)
chr4 (365-477)||(9981780-9981892)
chr4 (89-230)||(18135310-18135453)
chr4 (91-213)||(2411856-2411978)
chr4 (89-219)||(6246616-6246746)
chr4 (89-218)||(580422-580551)
chr4 (94-215)||(56216247-56216368)
chr4 (91-219)||(21221128-21221255)
chr4 (95-215)||(38046624-38046744)
chr4 (89-216)||(44199985-44200112)
chr4 (89-215)||(52535965-52536091)
chr4 (120-232)||(20688455-20688567)
chr4 (95-211)||(21229239-21229355)
chr4 (89-216)||(49122534-49122660)
chr4 (80-192)||(51833011-51833123)
chr4 (80-216)||(53303735-53303871)
chr4 (90-193)||(7350242-7350345)
chr4 (1-81)||(22453453-22453535)
chr4 (89-199)||(39834282-39834392)
chr4 (89-219)||(3085883-3086012)
chr4 (109-219)||(32517780-32517892)
chr4 (95-232)||(15170880-15171017)
chr4 (128-219)||(29833275-29833366)
chr4 (92-199)||(4698634-4698741)
chr4 (276-364)||(51194647-51194735)
chr4 (91-162)||(27006515-27006586)
chr4 (92-232)||(4698620-4698760)
chr4 (174-232)||(7350184-7350242)
chr4 (109-215)||(54612002-54612098)
chr4 (89-232)||(30191893-30192036)
chr4 (85-143)||(2643612-2643670)
chr4 (89-187)||(43413584-43413681)
chr4 (87-144)||(31227356-31227413)
chr4 (90-219)||(55190676-55190804)
chr4 (89-149)||(6246688-6246748)
chr4 (174-218)||(21554201-21554245)
chr4 (89-149)||(53225724-53225784)
chr4 (74-149)||(14785009-14785084)
chr4 (109-219)||(3043802-3043911)
chr4 (109-219)||(20745360-20745469)
chr4 (97-195)||(31240876-31240974)
chr4 (89-146)||(29833273-29833330)
chr4 (91-136)||(29834554-29834598)
chr4 (174-219)||(45828508-45828553)
chr4 (91-232)||(48361049-48361190)
chr4 (174-219)||(53225737-53225782)
chr4 (174-230)||(16412233-16412289)
chr4 (80-144)||(31854378-31854442)
chr4 (300-364)||(43038712-43038776)
chr4 (114-146)||(55466115-55466147)
[»] chr1 (42 HSPs)
chr1 (80-219)||(28359081-28359220)
chr1 (89-219)||(2352317-2352447)
chr1 (89-219)||(14281598-14281728)
chr1 (90-219)||(2961114-2961243)
chr1 (78-215)||(28989269-28989406)
chr1 (90-230)||(10380389-10380529)
chr1 (92-219)||(10065265-10065392)
chr1 (80-231)||(29312438-29312589)
chr1 (89-215)||(45536177-45536303)
chr1 (80-219)||(9548671-9548810)
chr1 (89-219)||(9301929-9302059)
chr1 (89-219)||(38830491-38830621)
chr1 (109-230)||(26545025-26545146)
chr1 (92-216)||(24594932-24595055)
chr1 (96-219)||(6784674-6784797)
chr1 (89-199)||(23398088-23398198)
chr1 (109-231)||(26550285-26550407)
chr1 (95-219)||(33325347-33325471)
chr1 (92-219)||(1673982-1674109)
chr1 (95-215)||(40161187-40161307)
chr1 (89-219)||(26733793-26733923)
chr1 (80-218)||(30264785-30264923)
chr1 (80-219)||(7796100-7796239)
chr1 (116-215)||(15289808-15289907)
chr1 (89-178)||(34718899-34718988)
chr1 (92-169)||(23537381-23537458)
chr1 (92-215)||(46320171-46320286)
chr1 (116-203)||(24463324-24463411)
chr1 (69-219)||(43929334-43929483)
chr1 (89-219)||(49944843-49944973)
chr1 (174-232)||(50155391-50155449)
chr1 (80-144)||(10380389-10380453)
chr1 (174-230)||(29256691-29256747)
chr1 (87-146)||(1673978-1674037)
chr1 (89-144)||(9301927-9301982)
chr1 (89-144)||(33325418-33325473)
chr1 (87-230)||(38040282-38040425)
chr1 (89-215)||(44939074-44939200)
chr1 (80-144)||(25021316-25021380)
chr1 (88-144)||(27422992-27423048)
chr1 (89-212)||(29892149-29892270)
chr1 (174-218)||(34146897-34146941)
[»] chr6 (28 HSPs)
chr6 (89-219)||(390815-390945)
chr6 (89-231)||(766425-766567)
chr6 (87-232)||(7405450-7405595)
chr6 (92-219)||(885612-885739)
chr6 (89-232)||(24949628-24949771)
chr6 (89-232)||(31971027-31971170)
chr6 (80-216)||(6801564-6801700)
chr6 (89-219)||(6047806-6047936)
chr6 (87-232)||(33859496-33859641)
chr6 (92-203)||(17225269-17225380)
chr6 (87-230)||(34639039-34639182)
chr6 (89-219)||(6045691-6045821)
chr6 (73-231)||(8558912-8559069)
chr6 (91-216)||(30686554-30686679)
chr6 (94-218)||(13144220-13144344)
chr6 (89-199)||(14931266-14931371)
chr6 (89-176)||(22898861-22898948)
chr6 (116-194)||(36351-36429)
chr6 (89-175)||(22880926-22881012)
chr6 (91-149)||(1158325-1158383)
chr6 (89-219)||(2810089-2810218)
chr6 (87-231)||(5483867-5484011)
chr6 (91-219)||(28630763-28630891)
chr6 (89-144)||(24949639-24949694)
chr6 (114-219)||(1158278-1158383)
chr6 (91-144)||(8558924-8558977)
chr6 (139-212)||(28863337-28863410)
chr6 (89-149)||(2943322-2943382)
[»] scaffold0002 (1 HSPs)
scaffold0002 (91-219)||(492315-492443)
[»] chr2 (53 HSPs)
chr2 (91-219)||(42263480-42263608)
chr2 (89-232)||(29866090-29866233)
chr2 (89-232)||(13775719-13775862)
chr2 (80-216)||(32880906-32881042)
chr2 (91-215)||(43657939-43658063)
chr2 (92-219)||(32197387-32197514)
chr2 (89-219)||(16241277-16241407)
chr2 (89-231)||(41260033-41260175)
chr2 (89-230)||(20427009-20427150)
chr2 (89-218)||(25891955-25892084)
chr2 (89-218)||(40430677-40430806)
chr2 (89-219)||(6761473-6761603)
chr2 (90-232)||(7765791-7765933)
chr2 (89-218)||(2100025-2100154)
chr2 (94-215)||(11363012-11363133)
chr2 (94-220)||(45065589-45065715)
chr2 (112-233)||(32750338-32750459)
chr2 (95-231)||(1944532-1944668)
chr2 (109-232)||(42341646-42341769)
chr2 (89-232)||(44737280-44737422)
chr2 (89-199)||(11711354-11711464)
chr2 (94-216)||(3264935-3265053)
chr2 (89-230)||(38598464-38598605)
chr2 (91-219)||(18452579-18452706)
chr2 (89-215)||(4740718-4740844)
chr2 (90-215)||(41205504-41205629)
chr2 (95-187)||(30864717-30864809)
chr2 (118-218)||(33913188-33913288)
chr2 (152-216)||(20360515-20360579)
chr2 (80-149)||(39377911-39377980)
chr2 (89-149)||(39377844-39377904)
chr2 (158-218)||(42470922-42470982)
chr2 (116-199)||(22857834-22857917)
chr2 (80-194)||(3037758-3037874)
chr2 (126-219)||(20555268-20555361)
chr2 (90-195)||(44736813-44736918)
chr2 (89-225)||(38983007-38983143)
chr2 (89-232)||(4063269-4063411)
chr2 (90-149)||(12486072-12486131)
chr2 (365-477)||(15480818-15480932)
chr2 (89-199)||(9152387-9152497)
chr2 (180-230)||(34447602-34447652)
chr2 (89-235)||(45034392-45034537)
chr2 (99-194)||(22857822-22857917)
chr2 (114-149)||(27596729-27596764)
chr2 (95-149)||(27182089-27182143)
chr2 (95-149)||(27831631-27831685)
chr2 (79-149)||(38598536-38598606)
chr2 (174-232)||(41205583-41205641)
chr2 (174-227)||(28249026-28249079)
chr2 (80-144)||(11711323-11711387)
chr2 (174-218)||(41153204-41153248)
chr2 (80-144)||(42341703-42341767)
[»] scaffold0123 (1 HSPs)
scaffold0123 (89-219)||(29252-29382)
[»] chr5 (44 HSPs)
chr5 (80-220)||(41989563-41989703)
chr5 (89-232)||(13144888-13145031)
chr5 (89-219)||(31802968-31803098)
chr5 (92-232)||(18353205-18353345)
chr5 (87-232)||(36418982-36419127)
chr5 (70-219)||(37699790-37699939)
chr5 (80-231)||(20578653-20578804)
chr5 (89-232)||(25027702-25027845)
chr5 (89-219)||(7749926-7750056)
chr5 (89-215)||(41046836-41046962)
chr5 (89-218)||(21610312-21610441)
chr5 (80-216)||(15569344-15569480)
chr5 (91-218)||(6338326-6338453)
chr5 (89-219)||(903976-904106)
chr5 (89-219)||(1108291-1108421)
chr5 (89-219)||(9601603-9601733)
chr5 (90-232)||(36417044-36417186)
chr5 (91-232)||(26898201-26898342)
chr5 (68-218)||(16089097-16089249)
chr5 (92-232)||(29374181-29374321)
chr5 (89-194)||(7945845-7945950)
chr5 (112-232)||(23411196-23411316)
chr5 (80-219)||(2959249-2959388)
chr5 (80-219)||(2967718-2967857)
chr5 (89-232)||(7053656-7053798)
chr5 (92-219)||(41815196-41815323)
chr5 (89-232)||(1643352-1643495)
chr5 (116-218)||(2825895-2825997)
chr5 (92-219)||(42311820-42311947)
chr5 (109-219)||(21090386-21090496)
chr5 (95-203)||(6910726-6910834)
chr5 (90-194)||(14338824-14338928)
chr5 (80-196)||(38393788-38393904)
chr5 (90-219)||(15968321-15968449)
chr5 (89-215)||(1138226-1138351)
chr5 (89-219)||(22731267-22731396)
chr5 (89-219)||(27488357-27488486)
chr5 (89-146)||(42311818-42311875)
chr5 (89-144)||(21090384-21090439)
chr5 (116-145)||(7272241-7272270)
chr5 (87-144)||(7750003-7750060)
chr5 (92-144)||(2825945-2825997)
chr5 (179-219)||(29299367-29299407)
chr5 (174-218)||(38394439-38394483)
[»] chr3 (62 HSPs)
chr3 (89-219)||(14768106-14768236)
chr3 (89-231)||(18765256-18765398)
chr3 (89-218)||(335386-335515)
chr3 (89-232)||(42605824-42605967)
chr3 (89-219)||(9465081-9465211)
chr3 (89-219)||(19202260-19202390)
chr3 (89-219)||(25846521-25846651)
chr3 (109-219)||(40464550-40464660)
chr3 (89-219)||(49122952-49123082)
chr3 (89-230)||(25113348-25113489)
chr3 (91-219)||(21653354-21653482)
chr3 (89-232)||(26999029-26999172)
chr3 (89-219)||(6086911-6087041)
chr3 (74-219)||(9440138-9440283)
chr3 (91-208)||(52114045-52114162)
chr3 (92-215)||(23825160-23825283)
chr3 (89-220)||(29019743-29019874)
chr3 (92-219)||(47449927-47450054)
chr3 (89-219)||(10049676-10049806)
chr3 (80-218)||(9190027-9190165)
chr3 (87-219)||(28564945-28565077)
chr3 (92-232)||(51698111-51698251)
chr3 (89-232)||(8243679-8243822)
chr3 (89-219)||(28945664-28945794)
chr3 (89-219)||(40214910-40215040)
chr3 (89-219)||(379078-379211)
chr3 (89-219)||(42225572-42225702)
chr3 (89-230)||(13826120-13826261)
chr3 (111-219)||(1122305-1122413)
chr3 (94-215)||(44593215-44593336)
chr3 (80-230)||(22003794-22003945)
chr3 (80-230)||(22011311-22011462)
chr3 (112-194)||(8825762-8825844)
chr3 (80-173)||(40141930-40142023)
chr3 (92-219)||(39341382-39341512)
chr3 (137-219)||(26123046-26123128)
chr3 (91-213)||(3484342-3484460)
chr3 (128-193)||(42841635-42841700)
chr3 (265-364)||(25376291-25376390)
chr3 (109-194)||(55139201-55139286)
chr3 (110-175)||(16660334-16660401)
chr3 (114-196)||(8987762-8987844)
chr3 (78-196)||(22003829-22003947)
chr3 (78-196)||(22011346-22011464)
chr3 (89-219)||(28406475-28406605)
chr3 (89-194)||(48593177-48593282)
chr3 (280-365)||(54392226-54392311)
chr3 (80-232)||(8243681-8243833)
chr3 (87-218)||(54537454-54537585)
chr3 (276-362)||(52694726-52694812)
chr3 (98-146)||(19880869-19880917)
chr3 (370-461)||(33129908-33129998)
chr3 (174-218)||(43448969-43449013)
chr3 (174-218)||(51723389-51723433)
chr3 (89-144)||(10049753-10049808)
chr3 (174-232)||(21662883-21662941)
chr3 (89-143)||(28406553-28406607)
chr3 (89-219)||(53441915-53442045)
chr3 (87-144)||(1122360-1122417)
chr3 (91-144)||(29019820-29019873)
chr3 (91-216)||(29457850-29457974)
chr3 (132-216)||(49885392-49885475)
[»] chr7 (46 HSPs)
chr7 (73-219)||(5347733-5347878)
chr7 (89-219)||(23248678-23248808)
chr7 (87-232)||(12763235-12763380)
chr7 (71-218)||(3411322-3411469)
chr7 (89-232)||(30866253-30866396)
chr7 (109-219)||(29770350-29770460)
chr7 (89-230)||(7463457-7463599)
chr7 (95-216)||(32050093-32050214)
chr7 (96-231)||(19979491-19979627)
chr7 (95-219)||(34281679-34281803)
chr7 (80-219)||(5909481-5909620)
chr7 (80-215)||(12426544-12426679)
chr7 (89-219)||(20397823-20397953)
chr7 (89-219)||(35427669-35427799)
chr7 (365-477)||(35611774-35611886)
chr7 (365-477)||(3614661-3614773)
chr7 (92-219)||(10599325-10599453)
chr7 (89-232)||(7107638-7107781)
chr7 (90-218)||(46680840-46680968)
chr7 (111-219)||(12085034-12085142)
chr7 (89-193)||(15074630-15074729)
chr7 (365-477)||(5569007-5569116)
chr7 (80-219)||(6173938-6174072)
chr7 (73-215)||(17351486-17351627)
chr7 (92-219)||(26563932-26564059)
chr7 (94-202)||(46449805-46449913)
chr7 (89-231)||(4826760-4826901)
chr7 (114-219)||(8566114-8566219)
chr7 (158-215)||(36655436-36655493)
chr7 (80-220)||(18672102-18672241)
chr7 (89-144)||(7107715-7107770)
chr7 (132-219)||(10007627-10007714)
chr7 (92-199)||(22055760-22055867)
chr7 (91-194)||(26563956-26564059)
chr7 (265-364)||(41422987-41423086)
chr7 (174-232)||(29365714-29365772)
chr7 (89-219)||(36245384-36245514)
chr7 (174-219)||(2523863-2523908)
chr7 (80-145)||(12085023-12085088)
chr7 (89-146)||(23248676-23248733)
chr7 (174-215)||(23870993-23871034)
chr7 (89-218)||(28677325-28677454)
chr7 (174-215)||(41850610-41850651)
chr7 (276-364)||(22629201-22629289)
chr7 (131-203)||(32903572-32903644)
chr7 (114-146)||(46449811-46449843)
[»] scaffold2107 (2 HSPs)
scaffold2107 (91-232)||(453-594)
scaffold2107 (89-144)||(528-583)
[»] scaffold1903 (1 HSPs)
scaffold1903 (365-477)||(851-963)
[»] scaffold0144 (1 HSPs)
scaffold0144 (89-232)||(38833-38976)
[»] scaffold0221 (1 HSPs)
scaffold0221 (89-219)||(11038-11168)
[»] scaffold0246 (1 HSPs)
scaffold0246 (91-219)||(15165-15292)
[»] scaffold0024 (1 HSPs)
scaffold0024 (89-219)||(35962-36092)
[»] scaffold0592 (1 HSPs)
scaffold0592 (109-218)||(407-516)
[»] scaffold0007 (1 HSPs)
scaffold0007 (116-219)||(77355-77458)
[»] scaffold0009 (1 HSPs)
scaffold0009 (95-219)||(3641-3774)
[»] scaffold0067 (1 HSPs)
scaffold0067 (94-216)||(5229-5351)
[»] scaffold0018 (1 HSPs)
scaffold0018 (95-193)||(183828-183926)
[»] scaffold0005 (1 HSPs)
scaffold0005 (74-149)||(54646-54721)
[»] scaffold0242 (1 HSPs)
scaffold0242 (174-231)||(16505-16562)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 8e-56; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 22781890 - 22782032
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22781890 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 22781989  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
     |||||||||||||| |||||||||||||||  ||||||||||    
T  22781990 caaaaaatcaactttctcttataaataggaccggaggaagtat 22782032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 2339298 - 2339428
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2339298 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2339397  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  2339398 taaaaagtcaactttctcttgtaaataggac 2339428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 33642466 - 33642592
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  33642466 cggtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 33642565  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    ||||||||||||||| |||| ||||||    
T  33642566 taaaaaatcaactttctcttgtaaata 33642592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 29563666 - 29563809
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  29563666 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattgaatgtatc 29563765  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||||| |||| ||||||||||  |||||||||||    
T  29563766 taaaaagtcaactttctcttgtaaataggaccggaggaagtatt 29563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 34028391 - 34028534
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34028391 cggtcctatttacaagtaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 34028490  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||  |||||||| |||| ||||||||||  |||| ||||||    
T  34028491 taaaaggtcaactttctcttgtaaataggaccggagggagtatt 34028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 41569245 - 41569106
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||||| || |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  41569245 tacttcatccgatcctatttacaagaaacaatttactttttagatatattaaataatttatgtatttggttgaggttcttgactagatacatacattatt 41569146  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||| ||||||||||||||||||| |||| ||||||||||    
T  41569145 caatatatctaaaaaatcaactttctcttgtaaataggac 41569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 2229210 - 2229067
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  2229210 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcattgtatc 2229111  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  2229110 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 2229067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 25847978 - 25848105
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  25847978 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaa 25848077  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||||| | |||| ||||||||||    
T  25848078 aaagtcaactgtctcttgtaaataggac 25848105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 27793204 - 27793335
Alignment:
Q  88 tcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 187  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||| ||| |||    
T  27793204 tcggtcctatttacaagagataatttactttttagatgcattaaataatttatgtatttggtttaggttcttgaccagatatatacattattgaatatat 27793303  T
Q  188 ctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||| |||||||| |||| ||||||||||    
T  27793304 ctaaaaagtcaactttctcttgtaaataggac 27793335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 42189818 - 42189941
Alignment:
Q  96 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 195  Q
    ||||||||||   ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  42189818 atttacaagagacaatttactttttaaatatattaaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaag 42189917  T
Q  196 tcaactttatcttataaataggac 219  Q
    ||||||||||| ||||||||||||    
T  42189918 tcaactttatcatataaataggac 42189941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 43135072 - 43135195
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||    
T  43135072 aatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctctt 43135171  T
Q  209 ataaataggactagaggaagtatt 232  Q
     ||||||||||  |||||||||||    
T  43135172 gtaaataggaccggaggaagtatt 43135195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 8242251 - 8242373
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||    
T  8242251 aatttactttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaaatttctttt 8242350  T
Q  209 ataaataggactagaggaagtat 231  Q
    ||||||||||||||||| |||||    
T  8242351 ataaataggactagagggagtat 8242373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 37564771 - 37564641
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||     
T  37564771 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttaactagatgcatacattattcaatgtatt 37564672  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||||||||||||||    
T  37564671 taaaaagtcaactttctcttataaataggac 37564641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 30924041 - 30923920
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||| | ||||    
T  30924041 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaagtcaactgtctctt 30923942  T
Q  209 ataaataggactagaggaagta 230  Q
     ||||||||||  |||||||||    
T  30923941 gtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 40465358 - 40465249
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||    
T  40465358 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctctt 40465259  T
Q  209 ataaatagga 218  Q
     |||||||||    
T  40465258 gtaaatagga 40465249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 11293337 - 11293197
Alignment:
Q  79 ttacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 178  Q
    ||||||| | |||||||||||||||||   ||||||||||||| ||||||||||| |||||||||  |||| |||||||||||||||||| |||||||||    
T  11293337 ttacttcctccggtcctatttacaagagacaatttactttttaaatacattaaatcatttatgtaaatggtttaggttcttgactagatacatacattat 11293238  T
Q  179 tcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||||||||||||| |||||||| |||| ||||||||||    
T  11293237 tcaatgtatctaaaaagtcaactttctcttgtaaataggac 11293197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 43295202 - 43295074
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||| ||  |||  |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  43295202 cggtcctatttacaaaaacaaata-actttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 43295104  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| | |||||| ||||||||||||||    
T  43295103 taaaaagttaactttctcttataaatagga 43295074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 32159171 - 32159044
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||| |||||||||||    
T  32159171 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttagattcttgattagatacatacattatttaatgtatctaa 32159072  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||| ||| |||| ||||||||||    
T  32159071 aaagtcaaatttctcttgtaaataggac 32159044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 12270196 - 12270070
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||| ||||||| |||||||    
T  12270196 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactaaatatatatattattcgatgtatc 12270097  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    |||||| |||||||| |||| ||||||    
T  12270096 taaaaagtcaactttctcttgtaaata 12270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 41915602 - 41915732
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   |||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  41915602 cggtcctatttataagagacaatttaatttttagatacattaaataatttatgtatttggtttagattattgactagatacatacattattcaatgtatc 41915701  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| ||| |||| ||||||||||    
T  41915702 taaaaagtcaattttctcttgtaaataggac 41915732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 95 - 231
Target Start/End: Complemental strand, 25878305 - 25878170
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| ||||||    
T  25878305 tatttacaagaaacaatttactttt-agatacattatataatttatgtatttgatttaggttcttgactagatacatacattcttcaatgtatttaaaaa 25878207  T
Q  195 atcaactttatcttataaataggactagaggaagtat 231  Q
     |||| ||| |||||||||||||||| |||| |||||    
T  25878206 gtcaattttctcttataaataggactggagggagtat 25878170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 34157671 - 34157799
Alignment:
Q  92 tcctatttacaagaattaatttactttt-tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||| |    
T  34157671 tcctatttacaagagataatttacttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcgatgtatcca 34157770  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    |||| |||| ||| |||| ||||||||||    
T  34157771 aaaattcaaatttctcttgtaaataggac 34157799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 7668202 - 7668329
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||    
T  7668202 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatttaa 7668301  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    |||  ||| ||| |||| ||||||||||    
T  7668302 aaagacaattttctcttgtaaataggac 7668329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 232
Target Start/End: Complemental strand, 3799859 - 3799713
Alignment:
Q  87 ttcggtcctatttacaagaattaatttacttttt-agatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgt 185  Q
    ||||||||||||||||| |   |||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  3799859 ttcggtcctatttacaatagacaatttacttttttaaatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgt 3799760  T
Q  186 atctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||||  | ||||| |||||||||| ||||  |||| ||||||    
T  3799759 atctaaaaagccgactttctcttataaatgggaccggagggagtatt 3799713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 40834171 - 40834273
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  40834171 tttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaagacaattttctcttataaata 40834270  T
Q  216 gga 218  Q
    |||    
T  40834271 gga 40834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 45145877 - 45146003
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    || |||||||||||||||||||    
T  45145877 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtttttggtttaggttcttgac----tacatacattattcaatgtatc 45145972  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| ||| |||| ||||||||||    
T  45145973 taaaaagtcaattttctcttgtaaataggac 45146003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 89 - 233
Target Start/End: Complemental strand, 42351338 - 42351194
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||| |||||| ||||||||    
T  42351338 cggtcctatttacaagagacaatttattttttagatacattaaataatttatatatttgatttaggttcttgactagatacatatattatttaatgtatc 42351239  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtattc 233  Q
    |||||| ||||| || |||| |||||| |||  |||| |||||||    
T  42351238 taaaaagtcaacattctcttgtaaataagaccggagggagtattc 42351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 33837588 - 33837719
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||| ||| ||||||||||||||     
T  33837588 cggttctatttacaagagacaatttactttttagatacattaaataatttatgcatttagtttagattcttgactagatacataaattattcaatgtatt 33837687  T
Q  189 t-aaaaaatcaactttatcttataaataggac 219  Q
    | |||||||||||||| |||| ||||||||||    
T  33837688 taaaaaaatcaactttctcttgtaaataggac 33837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 91 - 230
Target Start/End: Original strand, 29916537 - 29916676
Alignment:
Q  91 gtcctatttacaagaattaatttactttt-tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| || | |||| |||||||||||| |    
T  29916537 gtcctatttacaagaaacaatttacttttttagatacattaaataatttatgtatttggtttaagttcttgactaaat-actacaatattcaatgtatat 29916635  T
Q  190 aaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    ||||| ||||  || ||||||||||| ||||||||| ||||    
T  29916636 aaaaagtcaatcttctcttataaataagactagagggagta 29916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 16928941 - 16928840
Alignment:
Q  129 taaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaag 228  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||| |||||||||| |||||||||  ||||| || |||| ||||||||||| |||| ||    
T  16928941 taaataatttatgtatttggtttagattcttgagtagatacataaattattcaatttatctaaaatgtcaacattctcttgtaaataggactggagggag 16928842  T
Q  229 ta 230  Q
    ||    
T  16928841 ta 16928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 36366033 - 36366162
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| |||    
T  36366033 cggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatc 36366131  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||||| |||||| |||||||||||||||    
T  36366132 taaaaaattaactttttcttataaataggac 36366162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 10839818 - 10839762
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||| |||||||||    
T  10839818 attattcaatgaatctaaaaagtcaattttttcttataaataggactggaggaagta 10839762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 35011331 - 35011209
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  35011331 aatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattattgaatgaatctaaaaaattaactttttctt 35011233  T
Q  209 ataaataggactagaggaagtatt 232  Q
    |||||||||||  |||| ||||||    
T  35011232 ataaataggaccggaggtagtatt 35011209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 32159040 - 32159097
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  32159040 ttcggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtat 32159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 8453687 - 8453731
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||    
T  8453687 attactcaatgtatctaaaaaatcaaatttttcttataaatagga 8453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 6197940 - 6197905
Alignment:
Q  111 tttactttttagatacattaaataatttatgtattt 146  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6197940 tttactttttagatacattaaataattaatgtattt 6197905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 6354798 - 6354731
Alignment:
Q  78 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatt 145  Q
    |||||||||| |  ||||||||| ||||| ||||| | ||||||||| |||| |||||||||||||||    
T  6354798 attacttcatccaatcctatttataagaaataattaattttttagattcattgaataatttatgtatt 6354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 41915734 - 41915679
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  41915734 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 41915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 35149676 - 35149806
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| |||||  | || ||||||| |||  |||  |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||  ||||  |||    
T  35149676 cggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatc 35149775  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||| |||||||||||||||    
T  35149776 taaaaaatcaactttttcttataaataggac 35149806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 45146005 - 45145951
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 143  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| ||||||    
T  45146005 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta 45145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 11293193 - 11293250
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  11293193 ttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 11293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 25848107 - 25848050
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 146  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| |||||||||    
T  25848107 cggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtattt 25848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 7693173 - 7693113
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||| |||||  |||| ||||||||||| |||| | ||||| |||||||||||    
T  7693173 cggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggt 7693113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 24915318 - 24915254
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||| ||| |||||||||||| | |||  |||| ||||||||||| |||||||||||| ||||||    
T  24915318 tactacatccggtcctatttatatgaaaaaattaactttttagattcattaaataattgatgtat 24915254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 29563807 - 29563743
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  29563807 tacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtat 29563743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 30923920 - 30923984
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  30923920 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 30923984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 40465249 - 40465301
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    ||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  40465249 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 40465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 43135193 - 43135129
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  43135193 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 43135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 5e-54; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 229 - 360
Target Start/End: Original strand, 22453534 - 22453665
Alignment:
Q  229 tattctaactagtataactaattaaaatgtagtgtggtgaatgtattataggatctataaacttgtataatctaatggttagaaatcttggtccaatctg 328  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22453534 tattctaactagtagaactaattaaaatgtagcgtggtgaatgcattataggatctataaacttgtataatctaatggtcataaatcttggtccaatctg 22453633  T
Q  329 gaccaatacatccatgggtgcatggtaaacgg 360  Q
    |||||||||||||||||||||||| |||||||    
T  22453634 gaccaatacatccatgggtgcatgctaaacgg 22453665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 36099495 - 36099640
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36099495 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 36099594  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtattct 234  Q
    ||||||||||||| | |||| ||||||||||  |||| ||||||||    
T  36099595 taaaaaatcaactgtctcttgtaaataggaccggagggagtattct 36099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 31227270 - 31227409
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  31227270 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 31227369  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
     |||||||||||||| |||||||| |||| ||||||||||    
T  31227370 taatgtatctaaaaagtcaactttctcttgtaaataggac 31227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 23125654 - 23125797
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  23125654 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatc 23125753  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||| ||||||||| |||| |||||| |||| |||| ||||||    
T  23125754 taaaatatcaactttctcttgtaaataagactggagggagtatt 23125797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 5970419 - 5970289
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5970419 cggtcctatttacaagagacaatttactttttagacacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 5970320  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| | |||||||||||||    
T  5970319 taaaaagtcaactttcttttataaataggac 5970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 31854519 - 31854389
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  31854519 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtatc 31854420  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||| ||||||    
T  31854419 taaaaagtcaactttctcttgtaattaggac 31854389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 38688051 - 38687925
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  38688051 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtacattattcaatgtatc 38687952  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    |||||| |||||||| |||| ||||||    
T  38687951 taaaaagtcaactttctcttgtaaata 38687925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 19485582 - 19485710
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  19485582 gtcctatttacaagaaacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatcta 19485681  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    ||||||||| ||| |||| ||||||||||    
T  19485682 aaaaatcaattttctcttgtaaataggac 19485710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 47948949 - 47949076
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  47948949 gtcctacttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 47949048  T
Q  191 aaaaatcaactttatcttataaatagga 218  Q
    ||||||||||||| |||||||| |||||    
T  47949049 aaaaatcaactttctcttataattagga 47949076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 39877411 - 39877541
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |    
T  39877411 cggtcctatttacaagaaacgatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtacc 39877510  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  39877511 taaaaagtcaactttctcttgtaaataggac 39877541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 87 - 232
Target Start/End: Complemental strand, 18430397 - 18430250
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  18430397 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgta 18430298  T
Q  187 tctaaaa--aatcaactttatcttataaataggactagaggaagtatt 232  Q
    | |||||  | |||||||| |||| |||||||||| ||||| ||||||    
T  18430297 tttaaaaagagtcaactttctcttgtaaataggaccagagggagtatt 18430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 55292249 - 55292109
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||    
T  55292249 tcctatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaatgtatctaa 55292150  T
Q  192 aaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||| |||| ||| |||| ||||||||||  |||||||||||    
T  55292149 aaagtcaaatttctcttgtaaataggaccggaggaagtatt 55292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 2279533 - 2279660
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  2279533 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2279632  T
Q  190 aaaaaatcaactttatcttataaatagg 217  Q
    ||||| |||||||| |||| ||||||||    
T  2279633 aaaaagtcaactttctcttgtaaatagg 2279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 4758917 - 4758774
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  4758917 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttaactagatacatacattattcaatgtatc 4758818  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  4758817 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 4758774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 35328947 - 35329077
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  35328947 cggtcctatttacaaaaaataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 35329046  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| | | |||| |||| |||| |||||    
T  35329047 taaaaagtgacctttctcttgtaaacaggac 35329077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 2385334 - 2385205
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||||||||   |||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||    
T  2385334 ggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatct 2385235  T
Q  190 aaaaaatcaactttatcttataaataggac 219  Q
    ||||| |||||||| |||| ||||||||||    
T  2385234 aaaaagtcaactttctcttgtaaataggac 2385205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 53621468 - 53621338
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  53621468 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttcattagatacatacattattcaatgtatc 53621369  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  53621368 taaaaagtcaactgtctcttgtaaataggac 53621338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 9981892 - 9981780
Alignment:
Q  365 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattatttgtacttgttcttgttattgctgtttttgta 464  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| |    
T  9981892 ctctttctaatatgctacaaaaatcatcttcttcatccttaccttattattctcactccacccattgtttgtacttgttcttgttattgttgtttttgaa 9981793  T
Q  465 tatacccataact 477  Q
     ||||||||||||    
T  9981792 catacccataact 9981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 18135453 - 18135310
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||     
T  18135453 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatt 18135354  T
Q  189 taaaa--aatcaactttatcttataaataggactagaggaagta 230  Q
    |||||  | |||||||| |||| |||||||||| ||||| ||||    
T  18135353 taaaaagagtcaactttctcttgtaaataggaccagagggagta 18135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 2411978 - 2411856
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||| ||    
T  2411978 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtattta 2411879  T
Q  191 aaaaatcaactttatcttataaa 213  Q
    |||| | | |||| |||||||||    
T  2411878 aaaagtgatctttctcttataaa 2411856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 6246616 - 6246746
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||| |||||| ||||||||    
T  6246616 cggttctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgaccaaatacatatattattgaatgtatc 6246715  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  6246716 taaaaagtcaactttctcttgtaaataggac 6246746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 580551 - 580422
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||| |||||    
T  580551 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaacgtatc 580452  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| |||| ||| |||| |||||||||    
T  580451 taaaaagtcaattttctcttgtaaatagga 580422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 94 - 215
Target Start/End: Original strand, 56216247 - 56216368
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| | | ||||| |||| ||| ||||||||||||||||||||||||    
T  56216247 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaatgtatctaaaa 56216346  T
Q  194 aatcaactttatcttataaata 215  Q
    | |||||||| |||||||||||    
T  56216347 agtcaactttctcttataaata 56216368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 21221128 - 21221255
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||    
T  21221128 gtcctatttacaaaaac-aatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatatattattcaatgtatcta 21221226  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    |||| | | |||| ||||||||| |||||    
T  21221227 aaaagtgatctttctcttataaacaggac 21221255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 38046624 - 38046744
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||  ||||||| |||| ||||| || |||||||||||||||||||| ||| || ||||||| ||| |||||||||||||||||||||||||    
T  38046624 tatttacaagagataatttatttttcagatatataaaataatttatgtatttggtttagatttttgactaaatacatacattattcaatgtatctaaaaa 38046723  T
Q  195 atcaactttatcttataaata 215  Q
    |||||||||||||||||||||    
T  38046724 atcaactttatcttataaata 38046744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 44200112 - 44199985
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| |||||||||||   ||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||| ||||    
T  44200112 cggtcttatttacaagagacaatttactttttagatacactaaataatttatgtatttggtttagattcctgactagatatatacattattcaatatatc 44200013  T
Q  189 taaaaaatcaactttatcttataaatag 216  Q
     |||||||||||||| |||| |||||||    
T  44200012 aaaaaaatcaactttctcttgtaaatag 44199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 52536091 - 52535965
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| | |||||| || |||||||| |||||||||||||||||||    
T  52536091 cggtcctatttacaagatacaattaactttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaatgtatc 52535992  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    |||||| | |||||| |||||||||||    
T  52535991 taaaaagttaactttttcttataaata 52535965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 20688455 - 20688567
Alignment:
Q  120 tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  20688455 tagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 20688554  T
Q  220 tagaggaagtatt 232  Q
      |||| ||||||    
T  20688555 cggaggtagtatt 20688567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 21229239 - 21229355
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    ||||||||||||  ||||||   |||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  21229239 tatttacaagaaacaatttatcatttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaa 21229338  T
Q  195 atcaactttatcttata 211  Q
    || | ||||||||||||    
T  21229339 atgatctttatcttata 21229355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 49122660 - 49122534
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||| ||    
T  49122660 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttaactagatacatacattattcaatgt-tc 49122562  T
Q  189 taaaaaatcaactttatcttataaatag 216  Q
    |||||| |||||| | |||| |||||||    
T  49122561 taaaaagtcaactgtctcttgtaaatag 49122534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 51833011 - 51833123
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||| ||| |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||    
T  51833011 tactccatccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgaataaatatatacattatt 51833110  T
Q  180 caatgtatctaaa 192  Q
    || ||||||||||    
T  51833111 cattgtatctaaa 51833123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 80 - 216
Target Start/End: Original strand, 53303735 - 53303871
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||| ||| ||||||||||||||||    |||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||||||||    
T  53303735 tactccatccggtcctatttacaagtgacaatttattttttagatacactaaataatttatgtatttggtttagattcttgactaaatacatacattatt 53303834  T
Q  180 caatgtatctaaaaaatcaactttatcttataaatag 216  Q
    |||||||||||||||| | | ||| |||| |||||||    
T  53303835 caatgtatctaaaaaaaccattttctcttgtaaatag 53303871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 7350345 - 7350242
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    |||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||| |    
T  7350345 ggtcatatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatatattt 7350246  T
Q  190 aaaa 193  Q
    ||||    
T  7350245 aaaa 7350242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22453453 - 22453535
Alignment:
Q  1 ggatggagggagaaagtggaggaggagaaggg--ttccagcaataaatttcctaaaggagagagaaagagaaataaaaaatta 81  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22453453 ggatggagggagaaagtggaggaggagaaggggtttccagcaataaatttcctaaaggagagagaaagggaaataaaaaatta 22453535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 39834282 - 39834392
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| |||||||||||   |||||| ||||||||||||||||||||||||| ||||| || ||||||||||| |||||| ||||||||||||||||||     
T  39834282 cggtcttatttacaagagacaatttattttttagatacattaaataatttatatattttgtttaggttcttgattagatacatacattattcaatgtatt 39834381  T
Q  189 taaaaaatcaa 199  Q
    |||||||||||    
T  39834382 taaaaaatcaa 39834392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 3086012 - 3085883
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||||| ||    
T  3086012 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttatgttattgactaaatacatacattattcaatgt-tc 3085914  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| | |  ||| |||| ||||||||||    
T  3085913 taaaaagttatttttctcttgtaaataggac 3085883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 32517892 - 32517780
Alignment:
Q  109 aatttactttttag-atacattaaataattt-atgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatc 206  Q
    |||||| ||||||| ||| |||||||||||| ||||||||| | ||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| ||    
T  32517892 aatttattttttagtatatattaaataattttatgtatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaactttctc 32517793  T
Q  207 ttataaataggac 219  Q
    |||||||||||||    
T  32517792 ttataaataggac 32517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 232
Target Start/End: Complemental strand, 15171017 - 15170880
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||| | || |||||||| ||| || ||| |||||||||||||| ||||||    
T  15171017 tatttacaaaaaacaatttactttttagatacattgaataatttatgtatttgatttatgttcttgattagttacatatattattcaatgtatttaaaaa 15170918  T
Q  195 atcaactttatcttataaataggactagaggaagtatt 232  Q
     |||| ||| |||| |||||| |||  |||| ||||||    
T  15170917 gtcaattttctcttgtaaataagaccggagggagtatt 15170880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 29833366 - 29833275
Alignment:
Q  128 ttaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||||||||||||||||| | |||||||||||||| ||| ||| ||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  29833366 ttaaataatttatgtatttgatttaggttcttgactaaatacatatattcttcaatgtatctaaaaagtcaattttatcttgtaaataggac 29833275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 4698634 - 4698741
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||| ||||||||||  |||| | |||||||||||||| |||||||||||||| |||| ||| |||| ||| | ||| ||| ||||||||||||||||||    
T  4698634 tcctttttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaa 4698733  T
Q  192 aaaatcaa 199  Q
    ||||||||    
T  4698734 aaaatcaa 4698741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 51194735 - 51194647
Alignment:
Q  276 ataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 364  Q
    |||||||||||||| ||||  || |||||||| ||||||||||||||| | |||||||||||||||||| || |||| |||||||||||    
T  51194735 ataggatctataaatttgttcaagctaatggtaagaaatcttggtccagtatggaccaatacatccatgagtccatgctaaacggcacc 51194647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 27006515 - 27006586
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgac 162  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||    
T  27006515 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttagattcttgac 27006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 4698760 - 4698620
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||| ||  |||| | |||||||||||||| |||||||||||||| |||| |||  |||  || ||||| ||| ||||||||||||||||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaa 4698661  T
Q  192 aaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||| |||| | | |||| |||| ||||  ||||| ||||||    
T  4698660 aaattcaattgtttcttgtaaaaaggatcagagggagtatt 4698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 7350242 - 7350184
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||    
T  7350242 attattcaatgtatctaaaatgtcaactttctcttataaataggaccagaggaagtatt 7350184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 54612002 - 54612098
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||||||||||||||||||||||||||         ||| ||| ||| |||||||||||||||||| |||||  |||||||| ||||    
T  54612002 aatttactttttagatacattaaataatttatgtatttgg---------ttg-ctaaatacatacattattcaatgtatttaaaaggtcaactttctctt 54612091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 30192036 - 30191893
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| |||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| | ||| ||  |||| |||||| |||    
T  30192036 cggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatc 30191937  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||||||||| ||| ||||||||||||||||||| | ||||||    
T  30191936 taaaaaatcaattttttcttataaataggactagacggagtatt 30191893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 2643612 - 2643670
Alignment:
Q  85 cattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 143  Q
    |||||||||||||||| ||||| ||||| ||||||||| | |||| |||||||||||||    
T  2643612 cattcggtcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 43413681 - 43413584
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 187  Q
    |||| |||||||||||||  |||| | |||||||||| |||  ||| ||||||||| |||| ||| ||| |||||| ||| ||||||||||||||||||    
T  43413681 cggttctatttacaagaaacaattgattttttagatatattggata-tttatgtatctggtttagattcatgactacatacatacattattcaatgtat 43413584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 31227413 - 31227356
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  31227413 ttcggtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtat 31227356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 55190676 - 55190804
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    |||||||| || |||||  |||||||||||| ||| || |  |||||| ||||||||||| ||  |||| | ||||||| ||  |||||| |||| || |    
T  55190676 ggtcctatatataagaaacaatttacttttttgattcagtggataattgatgtatttggtctat-ttctaggctagatacatcaattattgaatgaatat 55190774  T
Q  190 aaaaaatcaactttatcttataaataggac 219  Q
    |||||||||| ||| |||||||||||||||    
T  55190775 aaaaaatcaattttttcttataaataggac 55190804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 6246748 - 6246688
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| ||||||||||||    
T  6246748 cggtcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggt 6246688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 21554201 - 21554245
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  21554201 attactcaatgaatctaaaaaatcaactttttcttataaatagga 21554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 53225784 - 53225724
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||| |||||  |||| ||||||||||| |||| ||||||| |||||||||||    
T  53225784 cggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggt 53225724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 14785009 - 14785084
Alignment:
Q  74 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    ||||| |||||| | || ||||||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||    
T  14785009 aaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 14785084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 3043911 - 3043802
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    |||||| ||||| ||| |||| |||| || ||||||||||| ||  || | |||||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  3043911 aatttatttttttgattcattgaatagttgatgtatttggtctatttt-tagactaggtacatcaattattgaatgaatctaaaaaattaactttttctt 3043813  T
Q  209 ataaataggac 219  Q
    |||||||||||    
T  3043812 ataaataggac 3043802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 20745360 - 20745469
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    |||||||||||| ||| |||| |||| || ||||||||| | ||  |||| | |||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  20745360 aatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaactttttctt 20745458  T
Q  209 ataaataggac 219  Q
    |||||||||||    
T  20745459 ataaataggac 20745469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 31240974 - 31240876
Alignment:
Q  97 tttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 195  Q
    ||||||||||  |||| |||||||| ||||||| ||||| |||||||||| || ||| || |  || ||||| ||| |||||||||  |||||||||||    
T  31240974 tttacaagaaacaattaactttttaaatacattgaataaattatgtatttagtttagattttaaaccagatacataaattattcaaaatatctaaaaaa 31240876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 29833273 - 29833330
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 146  Q
    |||||||||||||||||   |||| |||||||||||||||| || ||| |||||||||    
T  29833273 cggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtattt 29833330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 29834598 - 29834554
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataat 136  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  29834598 gtcctatttacaagaaa-aatttactttctagatacattaaataat 29834554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 45828508 - 45828553
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||| |||||| |||||||||||||| ||| |||||||||||||||    
T  45828508 attactcaatgaatctaaaaaatcaattttttcttataaataggac 45828553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 48361190 - 48361049
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| | ||| ||  |||| |||||| |||||    
T  48361190 gtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatcta 48361091  T
Q  191 aaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||| |||| ||| |||||||||||||||  |||| ||||||    
T  48361090 aaaagtcaaatttttcttataaataggaccggagggagtatt 48361049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 53225737 - 53225782
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||    
T  53225737 attattcaatgaatctaaaaagtcaattttttcttataaataggac 53225782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 16412289 - 16412233
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||| ||  |||||||||    
T  16412289 attattcaatgaatctaaaaagtcaattttttcttataaatagaaccggaggaagta 16412233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 31854378 - 31854442
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||| |||||||| ||||||||   | || |||||||||||||||| |||||| |||||||    
T  31854378 tacttcatccggtcctaattacaagagaaagttgactttttagatacattgaataatgtatgtat 31854442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 43038776 - 43038712
Alignment:
Q  300 ctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 364  Q
    |||||||| |||||||||| |||| | |||||||||||||| ||| || |||| |||||| ||||    
T  43038776 ctaatggtcagaaatcttgatccagtatggaccaatacatctatgagtccatgctaaacgacacc 43038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 55466147 - 55466115
Alignment:
Q  114 actttttagatacattaaataatttatgtattt 146  Q
    |||||||||||| ||||||||||||||||||||    
T  55466147 actttttagatatattaaataatttatgtattt 55466115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 28359220 - 28359081
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  28359220 tacttcatccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggttttggttcttgactagatacatatattatt 28359121  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28359120 caatgtatctaaaaaatcaactttctcttataaataggac 28359081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 2352317 - 2352447
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2352317 cggtcctatttacaagagacaatttactttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2352416  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  2352417 taaaaagtcaactgtctcttgtaaataggac 2352447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 14281598 - 14281728
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  14281598 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 14281697  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  14281698 taaaaagtcaactgtctcttgtaaataggac 14281728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 2961243 - 2961114
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  2961243 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2961144  T
Q  190 aaaaaatcaactttatcttataaataggac 219  Q
    ||||| |||||||| |||| ||||||||||    
T  2961143 aaaaagtcaactttctcttgtaaataggac 2961114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 28989269 - 28989406
Alignment:
Q  78 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 177  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||    
T  28989269 attactcccttcggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacatta 28989368  T
Q  178 ttcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    |||||||||||||| || |||||||| |||| ||||||    
T  28989369 ttcaatgtatctaataagtcaactttctcttgtaaata 28989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 90 - 230
Target Start/End: Complemental strand, 10380529 - 10380389
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  10380529 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 10380430  T
Q  190 aaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    ||||| |||| ||| |||| ||||||||||  |||||||||    
T  10380429 aaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 10065392 - 10065265
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  10065392 tcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattattcaatgtatctaa 10065293  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    |||||||| ||| |||| ||||||||||    
T  10065292 aaaatcaattttctcttgtaaataggac 10065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 29312438 - 29312589
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||    
T  29312438 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattatt 29312537  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    |||||||| |||||| |||||||| | || ||||||||||  ||||||||||    
T  29312538 caatgtatttaaaaagtcaactttctgttgtaaataggaccggaggaagtat 29312589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 45536303 - 45536177
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  45536303 cggtcctatttacaagagataatttactttttagatacatcaaataatttatgtatttggtttaggttcttgacttgataaatacattattgaatgtatc 45536204  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    |||||| |||| ||| |||| ||||||    
T  45536203 taaaaagtcaattttctcttgtaaata 45536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 9548671 - 9548810
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| | ||||| ||    
T  9548671 tacttcctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattctt 9548770  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  9548771 caatgtatctaaaaagtcaattttctcttgtaaataggac 9548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 9302059 - 9301929
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9302059 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatc 9301960  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| | |||| | |||| ||||||||||    
T  9301959 taaaaagttaactgtctcttgtaaataggac 9301929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 38830491 - 38830621
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||     
T  38830491 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatt 38830590  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  38830591 taaaaagtcaactgtctcttgtaaataggac 38830621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 26545025 - 26545146
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26545025 aatttactttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26545124  T
Q  209 ataaataggactagaggaagta 230  Q
     |||||| |||  |||||||||    
T  26545125 gtaaataagaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 24595055 - 24594932
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||||||| ||||||    
T  24595055 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacataattcaatg-atctaa 24594957  T
Q  192 aaaatcaactttatcttataaatag 216  Q
    ||| |||||||||| ||||||||||    
T  24594956 aaagtcaactttattttataaatag 24594932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 6784674 - 6784797
Alignment:
Q  96 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 195  Q
    ||||||| |||  |||||||||||||||||||||||||||||||| |||||| |  |||||||||| |||||| ||||||||||||||||||||||||||    
T  6784674 atttacaggaaacaatttactttttagatacattaaataatttatatatttgattcaggttcttgattagatacatacattattcaatgtatctaaaaaa 6784773  T
Q  196 tcaactttatcttataaataggac 219  Q
    |||||||| | |||||||||||||    
T  6784774 tcaactttctattataaataggac 6784797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 23398088 - 23398198
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   || |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  23398088 cggtcctatttacaagagacaacttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 23398187  T
Q  189 taaaaaatcaa 199  Q
    |||||| ||||    
T  23398188 taaaaagtcaa 23398198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 26550407 - 26550285
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26550407 aatttactttttagaaacattaaataatttatgtatttgctttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26550308  T
Q  209 ataaataggactagaggaagtat 231  Q
     |||||||||   ||||||||||    
T  26550307 gtaaataggatcggaggaagtat 26550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 33325347 - 33325471
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||   |||||| ||||||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||||||||||||||||||    
T  33325347 tatttacaagagacaatttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaatgtatctaaaaa 33325446  T
Q  195 atcaactttatcttataaataggac 219  Q
     |||||||| |||| ||||||||||    
T  33325447 gtcaactttttcttgtaaataggac 33325471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 1674109 - 1673982
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||||||||     
T  1674109 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatttaatgtatctag 1674010  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||||||| |||| ||||||||||    
T  1674009 aaagtcaactttctcttgtaaataggac 1673982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 40161307 - 40161187
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||||||| ||||||    
T  40161307 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaatgtatttaaaaa 40161208  T
Q  195 atcaactttatcttataaata 215  Q
     |||| ||| |||| ||||||    
T  40161207 gtcaattttctcttgtaaata 40161187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 26733793 - 26733923
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||| ||| |||||| | | ||||    
T  26733793 cggtcctatttacaagaaacaattaactttttagatacattaaataatctatgtatttggtttatattcttgactagatacataaattatttattttatc 26733892  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    || ||| |||||||| |||||||||||||||    
T  26733893 tataaagtcaactttctcttataaataggac 26733923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 30264923 - 30264785
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | ||||||||||||||| ||  |  |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| ||| ||||||    
T  30264923 tacttcctccggtcctatttacaataaacatgttactttttagatatattaaataatttatatatttggtttaggttcttgactagatacatatattatt 30264824  T
Q  180 caatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    ||||||||| || ||||||||||| |||  |||||||||    
T  30264823 caatgtatccaacaaatcaactttctctcgtaaatagga 30264785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 7796239 - 7796100
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | ||||| ||||||||||    |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||    
T  7796239 tacttcctccggtcatatttacaagtgacaatttattttttagatacattaaataatttatgtatttggtttagattcttgactaaatacatacattatt 7796140  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||||||||||||  | | ||| |||| ||||||||||    
T  7796139 caatgtatctaaaaagactattttctcttgtaaataggac 7796100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 15289808 - 15289907
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||| || ||||||||||||||||||||||||| |||||||| |||| ||||||    
T  15289808 tttttagatacattaaataatttatatatttggtttaggttattgactaggtacatacattattcaatgtatctaaaaagtcaactttctcttgtaaata 15289907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 34718899 - 34718988
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 178  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||||  ||||||||    
T  34718899 cggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagatttttgactagatacgtacattat 34718988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 23537458 - 23537381
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataa 169  Q
    ||||||||||||||   |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  23537458 tcctatttacaagagacaatttattttttagataaattaaataatttatgtatttggtttaggttcttgactaaataa 23537381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 46320286 - 46320171
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||     || ||||||||||| ||| |||||||||   ||||||    
T  46320286 tcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt-----ttattgactagatacatatattattcaa---atctaa 46320195  T
Q  192 aaaatcaactttatcttataaata 215  Q
    ||| ||||| || |||||||||||    
T  46320194 aaagtcaaccttctcttataaata 46320171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 24463324 - 24463411
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaacttt 203  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  | ||| |||||||||| |||| || |||||||||||||||    
T  24463324 tttttagatatattaaataatttatatatttggtttatgttcttgatcaaatacatacattattgaatgaatttaaaaaatcaacttt 24463411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 43929334 - 43929483
Alignment:
Q  69 aaataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagata 168  Q
    ||||||||| ||||| | | ||||||||| || |||||  |||||||||||| ||| ||||||||| || ||||||||||| ||  ||||   |||| ||    
T  43929334 aaataaaaagttactccctccggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggtcta-tttctaagctaggta 43929432  T
Q  169 aatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
     ||  |||||| |||| ||||||||| | |||||| |||||||||||||||    
T  43929433 catcaattattgaatgaatctaaaaagttaactttttcttataaataggac 43929483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 49944973 - 49944843
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  | || | ||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||||||||| |||    
T  49944973 cggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatc 49944874  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| | || ||| |||||||||||||||    
T  49944873 taaaaagttaaatttttcttataaataggac 49944843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 50155391 - 50155449
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||||||||||    
T  50155391 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagtatt 50155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 10380389 - 10380453
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||| | |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  10380389 tacttcctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtat 10380453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 29256691 - 29256747
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||||||||    
T  29256691 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagta 29256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 1673978 - 1674037
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 146  Q
    |||||||||||||||||||   | || ||||| ||||||||||||||||| |||||||||    
T  1673978 ttcggtcctatttacaagagaaagttgactttctagatacattaaataatatatgtattt 1674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 9301927 - 9301982
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  9301927 cggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtat 9301982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 33325473 - 33325418
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    ||||||||||||||||||  | || |||||||||||||||| |||||| |||||||    
T  33325473 cggtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtat 33325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 38040282 - 38040425
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||| |||||  | || ||||||| ||| ||||  |||| | || |||||| | ||  |||| ||| ||||| ||  |||| |||||| |    
T  38040282 ttcggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaa 38040381  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||||| |||| ||| |||||||||||||||  |||||||||    
T  38040382 tctaaaaagtcaaatttttcttataaataggaccggaggaagta 38040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 44939074 - 44939200
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| |||||  | || |||||||  || ||||  |||| | ||||||||||| ||  |||| || |||||| ||  |||| |||||| |||    
T  44939074 cggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatc 44939173  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    ||||||||||| ||| |||||||||||    
T  44939174 taaaaaatcaattttctcttataaata 44939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 25021380 - 25021316
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||| |||| |||||||||||||  |||| |||||||||||  ||| ||||||| ||||||    
T  25021380 tacttcatccggttctatttacaagaaacaattgactttttagatttattgaataattgatgtat 25021316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 27423048 - 27422992
Alignment:
Q  88 tcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    ||||||| ||||| || ||| |||| |||||||| ||||||| ||||||||||||||    
T  27423048 tcggtcccatttataaaaatcaattgactttttaaatacattgaataatttatgtat 27422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 29892270 - 29892149
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| | |||  |||| ||||||||||| |||| ||||||| || ||| |||| ||| || | |||  |||| ||| |||||||||  ||||    
T  29892270 cggtcctatttataggaaacaattgactttttagattcattcaataattgatatatctggtttagattttagaccggatacataaattattcaa--tatc 29892173  T
Q  189 taaaaaatcaactttatcttataa 212  Q
    |||||| |||||| | ||||||||    
T  29892172 taaaaagtcaactgtttcttataa 29892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 34146897 - 34146941
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  34146897 attattcaatgaatcaaaaaaatcaattttttcttataaatagga 34146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 390945 - 390815
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  390945 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 390846  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||||||||||||||||||||||| ||||    
T  390845 taaaaaatcaactttatcttataaattggac 390815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 766567 - 766425
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  766567 cggtcctatttacaagagataatttattttttagatacattaaataatttatgtatttggtttaggttattgactaaatacatacattattcaatgtatc 766468  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    ||||||||| ||||| ||||||||||||||   ||||||||||    
T  766467 taaaaaatcgactttctcttataaataggatcggaggaagtat 766425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 7405450 - 7405595
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7405450 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 7405549  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  7405550 tctaaaaagtcaattttctcttgtaaataagaccggagggagtatt 7405595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 885739 - 885612
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  885739 tcctatttacaagagagaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaa 885640  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||||| | |||| ||||||||||    
T  885639 aaagtcaactgtctcttgtaaataggac 885612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 24949771 - 24949628
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  24949771 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatc 24949672  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||| ||| |||| ||||||||||  |||| ||||||    
T  24949671 taaaaagtcaattttctcttgtaaataggaccggagggagtatt 24949628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 31971170 - 31971027
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31971170 cggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 31971071  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||||| |||| |||||| |||  |||| ||||||    
T  31971070 taaaaagtcaactttctcttgtaaataagaccggagggagtatt 31971027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 80 - 216
Target Start/End: Complemental strand, 6801700 - 6801564
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  6801700 tacttcatccagtcctatttacaagaaacaatttactttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattatt 6801601  T
Q  180 caatgtatctaaaaaatcaactttatcttataaatag 216  Q
    ||||||||||||||| | ||| ||||  |||||||||    
T  6801600 caatgtatctaaaaagttaaccttattatataaatag 6801564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 6047936 - 6047806
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  6047936 cggtcatatttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 6047837  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| | |||||| | || ||||||||||    
T  6047836 taaaaagttaactttctgttgtaaataggac 6047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 33859496 - 33859641
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||    
T  33859496 ttcggtcctatttacaatagacaatttactttttagatacattaaataatttatgtatttggtttagtttcttgactagatacatacattattcgatgta 33859595  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||| | |||||| |||| ||||||||||  |||| ||||||    
T  33859596 tctaaaaagttaactttctcttgtaaataggaccggagggagtatt 33859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 17225380 - 17225269
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  17225380 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacattattcaatgtatctaa 17225281  T
Q  192 aaaatcaacttt 203  Q
    ||| ||||||||    
T  17225280 aaagtcaacttt 17225269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 34639182 - 34639039
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||| ||||   ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||  |||||    
T  34639182 ttcggtcctatttataagagacaatttactttttagatacattgaaaaatttatgtatttggtttaggttcttgactagatacatacattattgcatgta 34639083  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||||| |||||| | |||| ||||||||||| |||||||||    
T  34639082 tctaaaaagtcaactgtctcttgtaaataggactggaggaagta 34639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 6045821 - 6045691
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||| ||| |||||||||||||||    
T  6045821 cggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagattattcaatgtatc 6045722  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||  |||||||| |||||||||||||||    
T  6045721 taaaaggtcaactttctcttataaataggac 6045691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 8559069 - 8558912
Alignment:
Q  73 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 172  Q
    ||||||||||| | | || || |||||||||||   |||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||    
T  8559069 aaaaaattactccctccgatcttatttacaagagacaatttattttttagatacat-aaataatttatgtatttggtttaggttcttaactagatacata 8558971  T
Q  173 cattattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    |||||||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||    
T  8558970 cattattcaatgtatctaaaaagtcaattttctcttgtaaataggactggagggagtat 8558912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 30686554 - 30686679
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||    
T  30686554 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattcaatgtattta 30686653  T
Q  191 aaaaatcaactttatcttataaatag 216  Q
    |||| |||| ||| |||| |||||||    
T  30686654 aaaagtcaattttctcttgtaaatag 30686679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 13144344 - 13144220
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||  ||  ||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||| ||| |||||||||||||    
T  13144344 ctatttacaagagatagattactttttagatacattaaataatttatgtattttgtttaggttcttgacttgatacatacataattgaatgtatctaaaa 13144245  T
Q  194 aatcaactttatcttataaatagga 218  Q
    | |||||||||| || |||||||||    
T  13144244 agtcaactttattttgtaaatagga 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 14931266 - 14931371
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||| ||     |||| |||||||||||||||||||    
T  14931266 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttttt-----gatacatacattattcaatgtatc 14931360  T
Q  189 taaaaaatcaa 199  Q
    |||||| ||||    
T  14931361 taaaaagtcaa 14931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 22898861 - 22898948
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatt 176  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||| |||||||    
T  22898861 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttgactatatacatacatt 22898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 36429 - 36351
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||| ||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||| ||||||||||    
T  36429 tttttagatatattaaataatttatgtatttggtttagatttttgactagatatataaattattcaatatatctaaaaa 36351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 22880926 - 22881012
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacat 175  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| ||||| || |||||||||||||| ||| ||||||    
T  22880926 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttagtttaggttcttgactatatacatacat 22881012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 1158383 - 1158325
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||||||| ||||| |||||||| ||||||| ||||||| |||||||||||    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggt 1158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 2810218 - 2810089
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || ||||| |||||||||||||  || |||| |||| || ||||||||||  ||  |||| |||||| || ||  |||||| |||| |||    
T  2810218 cggtcctatatataagaaataatttacttttttcattcattgaatagttgatgtatttggactat-ttctagactaggtacatcaattattgaatgaatc 2810120  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||||| |||||| | |||||||||||||    
T  2810119 taaaaaattaacttttttttataaataggac 2810089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 5483867 - 5484011
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    ||||||||||||||||| || || || |||||||| ||  ||||||||||| |||||||| || ||  || | ||||| ||| ||  ||||||||| | |    
T  5483867 ttcggtcctatttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacattaattattcaacgaa 5483966  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    |||||||| |||| | | ||||  ||||||||  |||||||||||    
T  5483967 tctaaaaagtcaattgtttcttgcaaataggagcagaggaagtat 5484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 28630891 - 28630763
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||| |||||  |||| ||||||||||| ||||  |||| ||||||||||||| ||  || | ||| ||||| ||  |||| |||||| ||  |    
T  28630891 gtcctatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaa 28630792  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    |||| |||| ||| |||||||||||||||    
T  28630791 aaaagtcaaatttttcttataaataggac 28630763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 24949639 - 24949694
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  24949639 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 24949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 1158278 - 1158383
Alignment:
Q  114 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaa 213  Q
    ||||||||||| |||| ||||||| ||||||| ||| ||  |||| ||| | ||| ||  |||||||||||||| |||||| |||| | | |||| ||||    
T  1158278 actttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttcttgtaaa 1158377  T
Q  214 taggac 219  Q
    ||||||    
T  1158378 taggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 8558924 - 8558977
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  8558924 gtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 8558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 28863410 - 28863337
Alignment:
Q  139 atgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataa 212  Q
    ||||||||||| ||  |||| ||| ||||| ||| ||||| ||||| | |||||||||||| ||||||||||||    
T  28863410 atgtatttggtttatattctagacaagatacataaattatacaatgaaactaaaaaatcaattttatcttataa 28863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 2943382 - 2943322
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    ||||||||| || |||||  |||||||||||| ||| ||||||||| || |||||||||||    
T  2943382 cggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggt 2943322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 492443 - 492315
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  492443 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 492344  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||| |||||||||||||||    
T  492343 aaaaatcaactttctcttataaataggac 492315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 42263608 - 42263480
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  42263608 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 42263509  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||| |||||||||||||||    
T  42263508 aaaaatcaactttctcttataaataggac 42263480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 29866090 - 29866233
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |    
T  29866090 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtacc 29866189  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| ||||||||||||| ||||||||||  |||| ||||||    
T  29866190 taaaaagtcaactttatcttgtaaataggaccggagggagtatt 29866233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 13775719 - 13775862
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||    
T  13775719 cggtcctatttacaagagataatttactttttagatatattaaataatttatgtatttggtttaggtttttgactagatacatacattatttaatgtatc 13775818  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||||| |||||||||||||||  |||| ||||||    
T  13775819 taaaaagtcaactttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 80 - 216
Target Start/End: Original strand, 32880906 - 32881042
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    ||||||||||| ||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  32880906 tacttcattcgatcctatttacaagagacaatttactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatatattatt 32881005  T
Q  180 caatgtatctaaaaaatcaactttatcttataaatag 216  Q
    |||| |||||||||| ||||||||||||| |||||||    
T  32881006 caatatatctaaaaagtcaactttatcttgtaaatag 32881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 43658063 - 43657939
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  43658063 gtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacattattcaatgtatcta 43657964  T
Q  191 aaaaatcaactttatcttataaata 215  Q
    |||| |||||||| |||| ||||||    
T  43657963 aaaagtcaactttctcttgtaaata 43657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 32197387 - 32197514
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  32197387 tcctatttacatgaaacaatttattttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaa 32197486  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    |||||||||||| |||| ||||||||||    
T  32197487 aaaatcaactttctcttgtaaataggac 32197514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 16241407 - 16241277
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16241407 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 16241308  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  16241307 taaaaagtcaactgtctcttgtaaataggac 16241277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 41260033 - 41260175
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  41260033 cggtcctatttacaagagacaatttacttttttgatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 41260132  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    |||||| || ||||| |||| ||||||||||  ||||||||||    
T  41260133 taaaaagtcgactttctcttgtaaataggaccggaggaagtat 41260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 20427009 - 20427150
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  20427009 cggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 20427108  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||| |||| ||| ||||||||||| ||| ||||| ||||    
T  20427109 taaaaagtcaattttctcttataaataagaccagagggagta 20427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 25892084 - 25891955
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  25892084 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatttatc 25891985  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| |||||| | ||||||||||||||    
T  25891984 taaaaagtcaactgtctcttataaatagga 25891955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 40430806 - 40430677
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40430806 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatc 40430707  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| |||| ||| ||||||||||||||    
T  40430706 taaaaagtcaattttctcttataaatagga 40430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 6761473 - 6761603
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  6761473 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatc 6761572  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  6761573 taaaaagtcaactgtctcttgtaaataggac 6761603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 90 - 232
Target Start/End: Complemental strand, 7765933 - 7765791
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  7765933 ggtcctatttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatct 7765834  T
Q  190 aaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||| |||||||| |||| ||||||||||  |||| ||||||    
T  7765833 aaaaagtcaactttctcttgtaaataggaccggagggagtatt 7765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 2100025 - 2100154
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2100025 cggtcctatttacaagagacatgttattttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2100124  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| |||||||| | ||||||||||||    
T  2100125 taaaaagtcaactttcttttataaatagga 2100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 11363133 - 11363012
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  11363133 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatagatacattattcaatgcatctaaaa 11363034  T
Q  194 aatcaactttatcttataaata 215  Q
    | |||||||| |||| ||||||    
T  11363033 agtcaactttctcttgtaaata 11363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 45065715 - 45065589
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||  | ||| |||| ||||||||| ||||||||||||||||||||||||    
T  45065715 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaa 45065616  T
Q  194 aatcaactttatcttataaataggact 220  Q
    | |||||||| | ||||||||||||||    
T  45065615 agtcaactttcttttataaataggact 45065589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 32750459 - 32750338
Alignment:
Q  112 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttata 211  Q
    ||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||    
T  32750459 ttactttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgta 32750360  T
Q  212 aataggactagaggaagtattc 233  Q
    ||||||||  |||| |||||||    
T  32750359 aataggaccggagggagtattc 32750338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 95 - 231
Target Start/End: Complemental strand, 1944668 - 1944532
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||   || ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1944668 tatttacaagagacaagttactttttagatacattaaataatatatgaatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 1944569  T
Q  195 atcaactttatcttataaataggactagaggaagtat 231  Q
     |||||||| | || |||||||||  ||||| |||||    
T  1944568 gtcaactttcttttgtaaataggatcagagggagtat 1944532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 42341646 - 42341769
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||| ||||||||||| ||| ||||    
T  42341646 aatttactttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatttaaaaaatcaattttctctt 42341745  T
Q  209 ataaataggactagaggaagtatt 232  Q
     ||||||||||  || ||||||||    
T  42341746 gtaaataggaccggatgaagtatt 42341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 44737422 - 44737280
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  44737422 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggt-tagattcttaactagatacatacattattcaatgtatc 44737324  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  44737323 taaaaagtcaattttctcttgtaaataagaccggagggagtatt 44737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 11711464 - 11711354
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||    
T  11711464 cggtcctatttacaagagacaatttacttttaagatacattaaataatttatgtatttgacttaggttcttgactagatacatacattattcaatgtatc 11711365  T
Q  189 taaaaaatcaa 199  Q
    |||||| ||||    
T  11711364 taaaaagtcaa 11711354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 3264935 - 3265053
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    ||||| || ||||||||||| ||| ||||||||||||||||||||||||    
T  3264935 ctatttacaagagacaatttactttttagatacattaaataatttat----ttggtttaagttcttgactaaatacatacattattcaatgtatctaaaa 3265030  T
Q  194 aatcaactttatcttataaatag 216  Q
    ||||||| |||||||||||||||    
T  3265031 aatcaacattatcttataaatag 3265053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 38598464 - 38598605
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| |||||||||||   ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  38598464 cggtcttatttacaagagacaatttactttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaatgtatc 38598563  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||| | |||||| | || ||||||||||  |||||||||    
T  38598564 taaaaagtaaactttcttttgtaaataggaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 18452579 - 18452706
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| ||    
T  18452579 gtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatatat-ta 18452677  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    |||| |||||| | |||| ||||||||||    
T  18452678 aaaagtcaactgtctcttgtaaataggac 18452706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 4740718 - 4740844
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||| |||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||     
T  4740718 cggtcctatttacaagaaacaattaactttttatatatattaaataatttatatatttggtataggttcttgattagatacatacattattcaatgtatt 4740817  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    |||||| | |||||| |||| ||||||    
T  4740818 taaaaagttaactttctcttgtaaata 4740844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 41205629 - 41205504
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||| ||||  ||||| | |||||||||| ||||||||||||||||||||||| ||  || || |||||||| ||| |||||||||| |||||    
T  41205629 ggtcctatttataagagataattaattttttagatatattaaataatttatgtatttggtttatattttttactagatacataaattattcaatatatct 41205530  T
Q  190 aaaaaatcaactttatcttataaata 215  Q
    |||||||||||||| |||||||||||    
T  41205529 aaaaaatcaactttctcttataaata 41205504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 30864809 - 30864717
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 187  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||    
T  30864809 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtat 30864717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 33913188 - 33913288
Alignment:
Q  118 tttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatagg 217  Q
    |||||||| ||||||||||||||||||||||| ||| |||| ||||||||| |||| ||||| ||| ||| ||||||||||||||||| || ||||||||    
T  33913188 tttagatatattaaataatttatgtatttggtttagattctcgactagatacatacgttatttaatatatttaaaaaatcaactttatattgtaaatagg 33913287  T
Q  218 a 218  Q
    |    
T  33913288 a 33913288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 20360515 - 20360579
Alignment:
Q  152 aggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatag 216  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  20360515 aggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaatag 20360579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 39377980 - 39377911
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||| | |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  39377980 tacttcttccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 39377844 - 39377904
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  39377844 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 42470982 - 42470922
Alignment:
Q  158 ttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  42470982 ttgactagatatatacattattcaatgtatctacaaaatcaactttcttttataaatagga 42470922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 22857917 - 22857834
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaa 199  Q
    |||||||||||| | ||||||||||||||||||| ||| |||| ||  ||||| ||| ||||||||||||||||||||| ||||    
T  22857917 tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaa 22857834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 3037874 - 3037758
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacat--ta 177  Q
    |||||||||||||||||| ||||||||  || | | ||||||||| |||| ||||||||||||||||||||||  |||| |||  |||| ||  ||  ||    
T  3037874 tacttcattcggtcctatatacaagaaacaaatgattttttagattcattgaataatttatgtatttggtgtatattctagaccggatacatcaattata 3037775  T
Q  178 ttcaatgtatctaaaaa 194  Q
    |||||||||||||||||    
T  3037774 ttcaatgtatctaaaaa 3037758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 20555361 - 20555268
Alignment:
Q  126 cattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||| |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||||||||||||||||||||| || ||| |||||||||||||||    
T  20555361 cattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggac 20555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 44736918 - 44736813
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    |||||| ||||||||||  |||| ||||||||||||| ||| |||| ||||||||||||  ||| |||| | ||||||  ||| |||| ||||| |||||    
T  44736918 ggtcctttttacaagaaacaattgactttttagatacgttagataaattatgtatttggcttagattctagtctagatgcataaattaatcaatatatct 44736819  T
Q  190 aaaaaa 195  Q
    ||||||    
T  44736818 aaaaaa 44736813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 38983007 - 38983143
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| || || || || ||||||| ||| ||||  |||| | |||||||| || ||  |||| ||| ||||| ||  ||||  ||||| |||    
T  38983007 cggtcctatttataaaaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatc 38983106  T
Q  189 taaaaaatcaactttatcttataaataggactagagg 225  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38983107 taaaaaatcaacttttttttataaataggactagagg 38983143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 4063411 - 4063269
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || |||||||| || ||  |||| || ||| || ||  |||||| |||| |||    
T  4063411 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtattttgtctat-ttctagagtaggtacatcaattattgaatgaatc 4063313  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||| |||||| |||||||||||| || ||||| ||||||    
T  4063312 taaaaaattaactttttcttataaatagaaccagaggtagtatt 4063269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 12486131 - 12486072
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||||||||  |||| ||||||||||| |||| ||||||| |||||||||||    
T  12486131 ggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 15480932 - 15480818
Alignment:
Q  365 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattatt--tgtacttgttcttgttattgctgtttttg 462  Q
    |||| |||||||||| ||||| ||  || ||||||||| |||||||| |||||||||||| ||||| ||  ||| |||||||||||| ||  ||| ||||    
T  15480932 ctctttctaatatgcaacaaacatcttcctcttcatccttaccttatcattctcactccacccattgttcatgtccttgttcttgttgttattgtctttg 15480833  T
Q  463 tatatacccataact 477  Q
     | ||||||||||||    
T  15480832 aacatacccataact 15480818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 9152387 - 9152497
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  | || ||||||| ||  |||||||||||| ||||||||||| ||  || | ||||||||| ||  |||| |||||| |||    
T  9152387 cggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatc 9152486  T
Q  189 taaaaaatcaa 199  Q
    |||||| ||||    
T  9152487 taaaaagtcaa 9152497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 34447602 - 34447652
Alignment:
Q  180 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  34447602 caatgaatctaaaaaatcaactttttcttataaataggaccagagggagta 34447652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 45034537 - 45034392
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| |  ||| || ||  |||||| |||| |||    
T  45034537 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatc 45034439  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtattcta 235  Q
    |||||| | |||||| |||||||||||||||  |||| |||||||||    
T  45034438 taaaaagttaactttttcttataaataggaccggaggtagtattcta 45034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 22857822 - 22857917
Alignment:
Q  99 tacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    ||||||||  |||| |||||||||||||||| |||||||||||||| || | |||  |||  || | ||| ||| |||||||| ||||||||||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattcattgtatctaaaaa 22857917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 149
Target Start/End: Complemental strand, 27596764 - 27596729
Alignment:
Q  114 actttttagatacattaaataatttatgtatttggt 149  Q
    |||||||||||||||| |||||||||||||||||||    
T  27596764 actttttagatacattgaataatttatgtatttggt 27596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 27182089 - 27182143
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    ||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||    
T  27182089 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggt 27182143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 27831631 - 27831685
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    ||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||    
T  27831631 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggt 27831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 38598606 - 38598536
Alignment:
Q  79 ttacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    ||||||| | ||||||||||||||| |   | ||||||||||||||||||| |||||| ||||||| ||||    
T  38598606 ttacttcctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggt 38598536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 41205583 - 41205641
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| ||| |||||||||||| || | | ||||||||||||||| ||||||||||||    
T  41205583 attatttaatatatctaaaaaattaattatctcttataaataggaccagaggaagtatt 41205641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 28249026 - 28249079
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaa 227  Q
    |||||| |||| ||||||||| |||||||| |||||||||||| ||| ||||||    
T  28249026 attatttaatgaatctaaaaagtcaactttttcttataaatagaactggaggaa 28249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 11711323 - 11711387
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||| ||||||||||||||||| | |   |||| |||||||||||||||| |||||| |||||||    
T  11711323 tactccattcggtcctatttacgaaagaaaattgactttttagatacattgaataatgtatgtat 11711387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 41153204 - 41153248
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    |||| |||||| ||||||||| |||||||| ||||||||||||||    
T  41153204 attactcaatgaatctaaaaagtcaactttttcttataaatagga 41153248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 42341767 - 42341703
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||| |||||||||||||||||   |||| | |||||| ||||||| |||||| |||||||    
T  42341767 tacttcatccggtcctatttacaagagaaaattgattttttaaatacattgaataatgtatgtat 42341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 29252 - 29382
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29252 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 29351  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  29352 taaaaagtcaactttctcttgtaaataggac 29382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 7e-50; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 41989563 - 41989703
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41989563 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 41989662  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggact 220  Q
    ||||||||||||||| |||||||| |||| |||||||||||    
T  41989663 caatgtatctaaaaagtcaactttctcttttaaataggact 41989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 13144888 - 13145031
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13144888 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 13144987  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||||||||||| | |||| ||||||||||  |||| ||||||    
T  13144988 taaaaaatcaactgtctcttgtaaataggaccggagggagtatt 13145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 31803098 - 31802968
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  31803098 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattattcaatgtatc 31802999  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  31802998 taaaaagtcaactttctcttgtaaataggac 31802968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 18353345 - 18353205
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||    
T  18353345 tcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatgtaa 18353246  T
Q  192 aaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||||||| |||| ||||||||||  |||| ||||||    
T  18353245 aaaatcaactttctcttgtaaataggacatgagggagtatt 18353205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 232
Target Start/End: Complemental strand, 36419127 - 36418982
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    ||||| |||||||||||||   |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  36419127 ttcggacctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgta 36419028  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    || ||||||||||||||||||| ||||||||||  |||| ||||||    
T  36419027 tcaaaaaaatcaactttatcttgtaaataggaccggagggagtatt 36418982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 37699939 - 37699790
Alignment:
Q  70 aataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataa 169  Q
    ||||||||  |||| ||| |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||     
T  37699939 aataaaaagatactacatccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatac 37699840  T
Q  170 atacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  37699839 atacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 37699790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 20578804 - 20578653
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| ||||||||||||||||| |   ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||    
T  20578804 tacttccttcggtcctatttacaatagacaatttactttttatatacattaaataatttatgtatttggtttaggttattgactagatagatatattatt 20578705  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    ||||||||||||||| |||||||| |||||||||||| || ||||| |||||    
T  20578704 caatgtatctaaaaagtcaactttctcttataaatagaaccagagggagtat 20578653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 25027702 - 25027845
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25027702 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatc 25027801  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  25027802 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 25027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 7749926 - 7750056
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7749926 cggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatc 7750025  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  7750026 taaaaagtcaactttctcttgtaaataggac 7750056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 41046836 - 41046962
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||||||||    
T  41046836 cggtcctatttacaagagacaatctactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtatc 41046935  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    ||||||||||||||| |||||||||||    
T  41046936 taaaaaatcaactttctcttataaata 41046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 21610441 - 21610312
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  21610441 cggtcctatttacaagaaacaattaactttttatatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattcaatgtatc 21610342  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| | ||||||||||| |||||||||    
T  21610341 taaaaagttaactttatcttgtaaatagga 21610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 80 - 216
Target Start/End: Complemental strand, 15569480 - 15569344
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  15569480 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgattagatatatacattatt 15569381  T
Q  180 caatgtatctaaaaaatcaactttatcttataaatag 216  Q
    ||||||||||||||| |||||||| |||| |||||||    
T  15569380 caatgtatctaaaaagtcaactttctcttgtaaatag 15569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 6338453 - 6338326
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  6338453 gtcctatttacaaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatcta 6338354  T
Q  191 aaaaatcaactttatcttataaatagga 218  Q
    |||| |||||||  ||||||||||||||    
T  6338353 aaaagtcaacttcctcttataaatagga 6338326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 904106 - 903976
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  904106 cggttctatttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacacacattattcaatatatc 904007  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  904006 taaaaagtcaactttctcttgtaaataggac 903976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 1108291 - 1108421
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||    
T  1108291 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgcatc 1108390  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    ||||| |||||||||||||  ||||||||||    
T  1108391 taaaagatcaactttatctcgtaaataggac 1108421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 9601733 - 9601603
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  9601733 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattattcaatgtatc 9601634  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  9601633 taaaaagtcaactttctcttgtaaataggac 9601603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 90 - 232
Target Start/End: Complemental strand, 36417186 - 36417044
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| |    
T  36417186 ggtcctatttataagaaacaatttactttttagatacattaaataatttatgtatttggattaggttcttgactagatacatacattattcaatgtattt 36417087  T
Q  190 aaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||| |||| ||| |||| ||||||||||  |||| ||||||    
T  36417086 aaaaagtcaaatttctcttgtaaataggaccggagggagtatt 36417044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 26898201 - 26898342
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  26898201 gtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgcatcta 26898300  T
Q  191 aaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||| |||||||| |||| ||||||||||  |||| ||||||    
T  26898301 aaaagtcaactttctcttgtaaataggaccggagggagtatt 26898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 16089249 - 16089097
Alignment:
Q  68 gaaataaaaaattacttcattcggtcctatttacaagaattaatttacttttt-agatacattaaataatttatgtatttggtgtaggttcttgactaga 166  Q
    |||||| |||| |||||  |||||||||||||||||||   |||||| ||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  16089249 gaaatagaaaagtacttttttcggtcctatttacaagagacaatttatttttttagatatattaaataatttatgtatttggtttaggttcatgactaga 16089150  T
Q  167 taaatacattattcaatgtatct-aaaaaatcaactttatcttataaatagga 218  Q
    || ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16089149 tacatacattattcaatgtacctaaaaaaatcaactttatcttataaatagga 16089097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 29374181 - 29374321
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  29374181 tcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattattcaatgtatctaa 29374280  T
Q  192 aaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||| |||||| | |||| ||||||||||  |||| ||||||    
T  29374281 aaagtcaactgtctcttgtaaataggaccggagggagtatt 29374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 7945845 - 7945950
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7945845 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatatatttggtttagattcttgactagatacatacattattcaatgtatc 7945944  T
Q  189 taaaaa 194  Q
    ||||||    
T  7945945 taaaaa 7945950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 23411196 - 23411316
Alignment:
Q  112 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttata 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| ||| |||| ||    
T  23411196 ttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaatcaattttctcttgta 23411295  T
Q  212 aataggactagaggaagtatt 232  Q
    |||| |||  |||| ||||||    
T  23411296 aataagaccggagggagtatt 23411316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 2959388 - 2959249
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||| ||||||| ||    
T  2959388 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattctt 2959289  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  2959288 caatgtatctaaaaagtcaattttctcttgtaaataggac 2959249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 2967857 - 2967718
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||| ||||||| ||    
T  2967857 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattctt 2967758  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  2967757 caatgtatctaaaaagtcaattttctcttgtaaataggac 2967718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 7053656 - 7053798
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||     
T  7053656 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggctcttgactagatacatacattattcaatgtatt 7053755  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| ||||| || |||| ||||||||||  |||| ||||||    
T  7053756 taaaaagtcaac-ttctcttgtaaataggaccggagggagtatt 7053798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 41815196 - 41815323
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||    
T  41815196 tcctatttacaataaacaatttactttttaaatacattaaataatttatgtatttggttcaggttcttgactaaatacgtacattattcaatgtatctaa 41815295  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||||||| |||| ||||||||||    
T  41815296 aaagtcaactttctcttgtaaataggac 41815323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 1643352 - 1643495
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||| |   ||||||||||||||||||||| || |||||||||||||| | ||| |||||||||||||| |||||||||| ||||||||    
T  1643352 cggtcctatttacaatagacaatttactttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacattattgaatgtatc 1643451  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||| | |||||||||||||||  |||| ||||||    
T  1643452 taaaaagtcaactgtctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 2825895 - 2825997
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||| ||| |||| ||||||    
T  2825895 tttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaata 2825994  T
Q  216 gga 218  Q
    |||    
T  2825995 gga 2825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 42311947 - 42311820
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||||||| |||    
T  42311947 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaatgtatttaa 42311848  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||| ||| |||| ||||||||||    
T  42311847 aaagtcaattttttcttgtaaataggac 42311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 21090496 - 21090386
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| | || ||| ||||    
T  21090496 aatttactttttaaatacattaaataatgtatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagttaattttctctt 21090397  T
Q  209 ataaataggac 219  Q
     ||||||||||    
T  21090396 gtaaataggac 21090386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 6910726 - 6910834
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||  |||||||||||||| ||||||||||    
T  6910726 tatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaatatatctaaaaa 6910825  T
Q  195 atcaacttt 203  Q
     ||||||||    
T  6910826 gtcaacttt 6910834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 14338824 - 14338928
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    |||| |||||||||||   |||| | |||||||||| ||||||||||||||||||||||| ||  ||||||| |||||| ||| ||||||||||||||||    
T  14338824 ggtcttatttacaagagacaattaattttttagataaattaaataatttatgtatttggtttaaattcttgaatagatacataaattattcaatgtatct 14338923  T
Q  190 aaaaa 194  Q
    |||||    
T  14338924 aaaaa 14338928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 38393904 - 38393788
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | |||| |||||||||||||  |||| |||||||| ||| ||| ||||||||||| ||||| | ||| |||||||||| ||| ||| ||||||    
T  38393904 tacttcctccggttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattatt 38393805  T
Q  180 caatgtatctaaaaaat 196  Q
    |||||||| | ||||||    
T  38393804 caatgtattttaaaaat 38393788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 15968449 - 15968321
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    |||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | ||||||| ||  |||||| |||| ||||    
T  15968449 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattgaatgaatct 15968351  T
Q  190 aaaaaatcaactttatcttataaataggac 219  Q
    ||||||| |||||| |||||||||||||||    
T  15968350 aaaaaattaactttttcttataaataggac 15968321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 1138226 - 1138351
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| |||||  |||||||||||| |||  ||| ||||||| ||||||||||| ||  |||| | ||||||| ||  |||||| |||| ||     
T  1138226 cggtcctatttataagaaacaatttacttttttgatttattgaataattaatgtatttggtcta-tttctagtctagatacattaattatttaatgaatt 1138324  T
Q  189 taaaaaatcaactttatcttataaata 215  Q
    ||||||||||| ||| |||||||||||    
T  1138325 taaaaaatcaattttttcttataaata 1138351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 22731267 - 22731396
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| |||    
T  22731267 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattatttaatgaatc 22731365  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||||| |||||| |||||||||||||||    
T  22731366 taaaaaattaactttttcttataaataggac 22731396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 27488486 - 27488357
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || || |||||||| ||  |||| | ||||||| ||  |||||| |||| |||    
T  27488486 cggtcctatatataagaaacaatttacttttttgattcattcaatagttgatatatttggtctat-ttctaggctagatacatcaattattgaatgaatc 27488388  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||||| || ||| |||||||||||||||    
T  27488387 taaaaaattaattttttcttataaataggac 27488357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 42311818 - 42311875
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 146  Q
    ||||||||||||||||||  |||| |||||||| ||||||| |||||| |||||||||    
T  42311818 cggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtattt 42311875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 21090384 - 21090439
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  21090384 cggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtat 21090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 7272241 - 7272270
Alignment:
Q  116 tttttagatacattaaataatttatgtatt 145  Q
    ||||||||||||||||||||||||||||||    
T  7272241 tttttagatacattaaataatttatgtatt 7272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 7750060 - 7750003
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  7750060 ttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 7750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 2825997 - 2825945
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    ||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  2825997 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 2825945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 29299407 - 29299367
Alignment:
Q  179 tcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  29299407 tcaatgaatctaaaaaatcaaatttttcttataaataggac 29299367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 38394483 - 38394439
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    ||||||||||| ||||||||| |||| ||| ||||||||||||||    
T  38394483 attattcaatgaatctaaaaagtcaattttttcttataaatagga 38394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 14768106 - 14768236
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  14768106 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 14768205  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||| |||| ||||||||||    
T  14768206 taaaaaatcaactttctcttgtaaataggac 14768236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 18765398 - 18765256
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  18765398 cggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatc 18765299  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||    
T  18765298 taaaaaatcaactttctcttgtaaatatgaccggaggaagtat 18765256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 335515 - 335386
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  335515 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 335416  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| |||||||| |||| |||||||||    
T  335415 taaaaagtcaactttctcttgtaaatagga 335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 42605967 - 42605824
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||| ||||||||   |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||    
T  42605967 cggtcctacttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaagttcttgactagatacatacattattcaatgtatc 42605868  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||    
T  42605867 taaaaaatcaactttatcttgtaaataggactggagggagtatt 42605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 9465211 - 9465081
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  9465211 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 9465112  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| ||||||||||||| ||||||||||    
T  9465111 taaaaagtcaactttatcttgtaaataggac 9465081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 19202390 - 19202260
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  19202390 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacataccttattcaatgtatc 19202291  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  19202290 taaaaagtcaactttctcttgtaaataggac 19202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 25846651 - 25846521
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25846651 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 25846552  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||| | | |||||||||||||    
T  25846551 taaaaaatcaactgtcttttataaataggac 25846521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 40464550 - 40464660
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40464550 aatttactttttagataaattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaaatcaactttatctt 40464649  T
Q  209 ataaataggac 219  Q
    |||||||||||    
T  40464650 ataaataggac 40464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 49122952 - 49123082
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  49122952 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggctcttgactagatacatacattattcaatgtatc 49123051  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| |||||| ||||||||||||    
T  49123052 taaaaagtcaaatttatcctataaataggac 49123082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 25113489 - 25113348
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  25113489 cggtcctatttacaagagacaatttactttttcgatacattaaataatttatgtatttggtttaggttcttgattaaatacatacattattcaatgtatc 25113390  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||| |||||||| |||||||||||||||  |||||||||    
T  25113389 taaaaagtcaactttctcttataaataggaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 21653482 - 21653354
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  21653482 gtcctatttacaagagacaatttactttttagatacattaaataatttatgcatttggtttaggttcttgactagatatatacattattcaatgtatcta 21653383  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    ||||||||| ||| |||| ||||||||||    
T  21653382 aaaaatcaaatttctcttgtaaataggac 21653354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 26999029 - 26999172
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  26999029 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 26999128  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||| | | |||| ||||||||||  |||| ||||||    
T  26999129 taaaaagtcaaatgtctcttgtaaataggaccggagggagtatt 26999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 6087041 - 6086911
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6087041 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 6086942  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||| | |||| ||||||||||    
T  6086941 taaaaagtcaactgtctcttgtaaataggac 6086911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 9440283 - 9440138
Alignment:
Q  74 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatac 173  Q
    |||||||||| | | |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||    
T  9440283 aaaaattactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatac 9440184  T
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||||||||||||||| |||||| | |||| ||||||||||    
T  9440183 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 9440138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 52114162 - 52114045
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  52114162 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaatgtatcta 52114063  T
Q  191 aaaaatcaactttatctt 208  Q
    ||||||||||||| ||||    
T  52114062 aaaaatcaactttctctt 52114045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 23825160 - 23825283
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  23825160 tcctatttacaagaaacaatttactttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaa 23825259  T
Q  192 aaaatcaactttatcttataaata 215  Q
    ||| |||||||| |||| ||||||    
T  23825260 aaagtcaactttctcttgtaaata 23825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 29019743 - 29019874
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  29019743 cggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 29019842  T
Q  189 taaaaaatcaactttatcttataaataggact 220  Q
    |||||| |||| ||| |||| |||||||||||    
T  29019843 taaaaagtcaattttctcttgtaaataggact 29019874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 47449927 - 47450054
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  47449927 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaa 47450026  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||||||| | || ||||||||||    
T  47450027 aaactcaactttctattgtaaataggac 47450054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 10049676 - 10049806
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10049676 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 10049775  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| | | |||| ||||||||||    
T  10049776 taaaaagtcaattgtctcttgtaaataggac 10049806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 9190027 - 9190165
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| |||| || |||||||||||    |||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||    
T  9190027 tacttccttcgatcatatttacaagagacgatttacttttaagatacattaaataatttatgtatttggtttaaattcttgactagatacatacattatt 9190126  T
Q  180 caatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  9190127 caatgtatctaaaaagtcaactttctcttataaatagga 9190165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 28565077 - 28564945
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||||||||   |||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  28565077 ttcggtcctatttacaagagacaatttattttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgta 28564978  T
Q  187 tctaaaaaatcaactttatcttataaataggac 219  Q
    | |||||| |||| ||| |||| ||||||||||    
T  28564977 tataaaaagtcaattttctcttgtaaataggac 28564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 51698251 - 51698111
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||| |||||||||| |||||||||||    
T  51698251 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcattactagatacatacattattgaatgtatctaa 51698152  T
Q  192 aaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||| |||||||| |||| ||||||||||  |||| ||||||    
T  51698151 aaagtcaactttctcttgtaaataggaccggagggagtatt 51698111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 8243822 - 8243679
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  8243822 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatc 8243723  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||| | | |||| |||||| |||  || ||||||||    
T  8243722 taaaaagtcaattgtctcttgtaaataagaccggatgaagtatt 8243679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 28945664 - 28945794
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| ||| ||||    
T  28945664 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagaaacatacattattgaatatatc 28945763  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| ||| |||| ||||||||||    
T  28945764 taaaaagtcaattttctcttgtaaataggac 28945794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 40215040 - 40214910
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   || |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||||||    
T  40215040 cggtcctatttataagagacaagttactttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatccaatgtatc 40214941  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  40214940 taaaaagtcaactttctcttgtaaataggac 40214910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 379078 - 379211
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggtt---cttgactagataaatacattattcaatgt 185  Q
    |||||||||||||||||   |||| | |||||||||||||||||||||||||||||||||| ||| ||   |||||||||||| ||| ||||||||||||    
T  379078 cggtcctatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagattgatcttgactagatacataaattattcaatgt 379177  T
Q  186 atctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||| |||||||| |||||||||||||||    
T  379178 atctaaaaagtcaactttctcttataaataggac 379211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 42225702 - 42225572
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| ||||||||| ||  |||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||    
T  42225702 cggtcttatttacaaaaaacaatttacttttttgatacattaaataatttatgtatttagtttaggttattgactagatacatacattattcaatgtatc 42225603  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||||| || ||| |||| ||||| ||||    
T  42225602 taaaaaattaattttttcttgtaaatgggac 42225572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 13826120 - 13826261
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||   ||||||||||||  |||||||||||||||||| ||||| | |||||||||||||| ||| ||||||| |||||||||||    
T  13826120 cggtcctatttacaagaaacgatttactttttatttacattaaataatttatgaatttgatttaggttcttgactaaatacatacattcttcaatgtatc 13826219  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||| |||||||| |||| ||||||| ||  |||||||||    
T  13826220 taaaaagtcaactttctcttgtaaatagaaccggaggaagta 13826261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 1122305 - 1122413
Alignment:
Q  111 tttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttat 210  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||| |    
T  1122305 tttactttttagatacattaaataatttatgtatttattttaggttcttgactagatacatacattcttcaatgtatctaaaaagtcaattttctcttgt 1122404  T
Q  211 aaataggac 219  Q
    |||||||||    
T  1122405 aaataggac 1122413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 44593336 - 44593215
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||| || ||| |||| |||||| ||| |||||||||||||| |||||    
T  44593336 ctatttacaaaaagtaatttaatttttagatacattaaataatttatgtatttggtttaagtttttgattagatacatatattattcaatgtatttaaaa 44593237  T
Q  194 aatcaactttatcttataaata 215  Q
    | |||||||| |||| ||||||    
T  44593236 agtcaactttttcttgtaaata 44593215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 230
Target Start/End: Original strand, 22003794 - 22003945
Alignment:
Q  80 tacttcattcggtcct-atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 178  Q
    |||||||| ||||||  ||||||||||   |||| | |||||||||||||| |||||||||| ||||| || ||| ||||| |||||||| ||| |||||    
T  22003794 tacttcatccggtccccatttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattat 22003893  T
Q  179 tcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||||||||||||| |||| ||| | |||||||||||||  |||||||||    
T  22003894 tcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22003945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 230
Target Start/End: Original strand, 22011311 - 22011462
Alignment:
Q  80 tacttcattcggtcct-atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 178  Q
    |||||||| ||||||  ||||||||||   |||| | |||||||||||||| |||||||||| ||||| || ||| ||||| |||||||| ||| |||||    
T  22011311 tacttcatccggtccccatttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattat 22011410  T
Q  179 tcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 230  Q
    |||||||||||||||| |||| ||| | |||||||||||||  |||||||||    
T  22011411 tcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22011462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 8825762 - 8825844
Alignment:
Q  112 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||| |||||||||    
T  8825762 ttactttttagatatattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgcatctaaaaa 8825844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 40142023 - 40141930
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatac 173  Q
    |||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||| ||||    
T  40142023 tacttccttcagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaaattcttgactaaatacatac 40141930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 39341512 - 39341382
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt---caatgtatc 188  Q
    ||||||||||||||| ||  |||| ||||||||| |||||||||||||| |||||| | ||| |||||||||||||| ||||||||||    ||||||||    
T  39341512 tcctatttacaagaaatacgttacattttagatatattaaataatttatatatttgatttagattcttgactagatacatacattatttaataatgtatc 39341413  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| ||| |||| ||||||||||    
T  39341412 taaaaagtcaattttctcttgtaaataggac 39341382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 26123046 - 26123128
Alignment:
Q  137 ttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||| |||| |||| ||||||||||    
T  26123046 ttatgcatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagtcatctttctcttgtaaataggac 26123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 3484342 - 3484460
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    |||||||||||||||   |||| | ||||||||||||||||||| |||||||||||||| ||| ||||||| ||  |||    |||||||||| ||||||    
T  3484342 gtcctatttacaagagacaattaattttttagatacattaaatagtttatgtatttggtttagattcttgagtacgtaa----attattcaatatatcta 3484437  T
Q  191 aaaaatcaactttatcttataaa 213  Q
    ||||||||||||| | |||||||    
T  3484438 aaaaatcaactttcttttataaa 3484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 42841700 - 42841635
Alignment:
Q  128 ttaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||||||||||||||    
T  42841700 ttaaataatttatgtatttagtttagattcttaactagatatatacattattcaatgtatctaaaa 42841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 25376390 - 25376291
Alignment:
Q  265 gtgaatgtattataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 364  Q
    ||||||| || |||| |||||||| ||||| ||||||||||| ||||||| |||||||| | |||||||||||||| ||| || |||| |||| ||||||    
T  25376390 gtgaatgcatgatagaatctataagcttgtttaatctaatggatagaaatgttggtccagtatggaccaatacatctatgagtccatgctaaatggcacc 25376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 55139201 - 55139286
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||| |||||||||||||||| ||||||||||||||||| | ||  |||||||| | ||| ||| |||||||||| ||||||||||    
T  55139201 aattgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaa 55139286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 16660401 - 16660334
Alignment:
Q  110 atttactttttagatacattaaataa--tttatgtatttggtgtaggttcttgactagataaatacat 175  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||| ||| ||||||    
T  16660401 atttactttttagatacattaaataaaatttatgtatttggtttaggttgttgactaaatacatacat 16660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 8987844 - 8987762
Alignment:
Q  114 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaat 196  Q
    |||||||||||||||| ||||||||||||||||||| ||  |||| ||| | ||| |||  |||||||||| |||||||||||    
T  8987844 actttttagatacattcaataatttatgtatttggtttaaattctagaccaaatacataagttattcaatgcatctaaaaaat 8987762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 22003947 - 22003829
Alignment:
Q  78 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 177  Q
    |||||||| | |||||||||||| || |   |||| |||||||||||||||| |||||||||||||| | ||  ||  |||  |||| ||| ||| ||||    
T  22003947 attacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatta 22003848  T
Q  178 ttcaatgtatctaaaaaat 196  Q
    |||||||||||||||||||    
T  22003847 ttcaatgtatctaaaaaat 22003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 22011464 - 22011346
Alignment:
Q  78 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 177  Q
    |||||||| | |||||||||||| || |   |||| |||||||||||||||| |||||||||||||| | ||  ||  |||  |||| ||| ||| ||||    
T  22011464 attacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatta 22011365  T
Q  178 ttcaatgtatctaaaaaat 196  Q
    |||||||||||||||||||    
T  22011364 ttcaatgtatctaaaaaat 22011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 28406475 - 28406605
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||| ||||||||||| | || ||||||| ||||||||||| ||  |||| |||  | || ||| ||||||||||| | |    
T  28406475 cggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattcaatgaacc 28406574  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| | | |||| ||||||||||    
T  28406575 taaaaagtcaattgtttcttgtaaataggac 28406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 48593282 - 48593177
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| ||||||||  || | | ||||||||| |||| ||||||||||||||||||| ||  |||| |||  |||| ||  |||||||||||||||    
T  48593282 cggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatc 48593183  T
Q  189 taaaaa 194  Q
    ||||||    
T  48593182 taaaaa 48593177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 365
Target Start/End: Original strand, 54392226 - 54392311
Alignment:
Q  280 gatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcaccc 365  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||| |||||||||||||  |||||| |||  |||||| |||||    
T  54392226 gatctataagcttgtgtaatttaatggtcagaaatcttgatccaatatggaccaatacatgtatgggtccatcctaaacgccaccc 54392311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 8243681 - 8243833
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||||| ||||| |||||||||||   |||| |||||||||||||||| |||||| ||||||| | ||  ||  |||  || | ||| ||| ||||||    
T  8243681 tacttcatccggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatt 8243780  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||||||||||||| | || | | |||| ||||||||||  |||| ||||||    
T  8243781 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 8243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 54537585 - 54537454
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||| ||||| | ||| ||||||| ||| ||||  |||| || |||||||| | ||  |||| ||||||||| ||  |||| |||||| |    
T  54537585 ttcggtcctatttataagaaattattgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaa 54537486  T
Q  187 tctaaaaaatcaactttatcttataaatagga 218  Q
    ||| |||| |||| ||| ||||||||||||||    
T  54537485 tcttaaaagtcaaatttttcttataaatagga 54537454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 52694726 - 52694812
Alignment:
Q  276 ataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggca 362  Q
    |||||||||||||  ||||  || |||||||| |||||||||| |||| | |||||||||||||| ||| || |||| |||||||||    
T  52694726 ataggatctataagtttgttcaagctaatggtcagaaatcttgatccagtatggaccaatacatctatgagtccatgctaaacggca 52694812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 19880869 - 19880917
Alignment:
Q  98 ttacaagaattaatttactttttagatacattaaataatttatgtattt 146  Q
    |||||||||  |||| || ||||||||||||||||||||||||||||||    
T  19880869 ttacaagaaacaattgacgttttagatacattaaataatttatgtattt 19880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 461
Target Start/End: Original strand, 33129908 - 33129998
Alignment:
Q  370 tctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattat--ttgtacttgttcttgttattgctgttttt 461  Q
    |||||||||||||||| ||   | ||||||||| ||||||||||||||||||||| ||||| |  ||   |||||||||||| |||||||||||    
T  33129908 tctaatatgctacaaacat---cctcttcatccttaccttattattctcactccacccattgttatttcccttgttcttgttgttgctgttttt 33129998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 43449013 - 43448969
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  43449013 attactcaatgaatctaaaaaatcaactttttcttataaatagga 43448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 51723433 - 51723389
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  51723433 attactcaatgaatctaaaaaatcaactttttcttataaatagga 51723389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 10049808 - 10049753
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  10049808 cggtcctatttacaagagacaattgactttttagatacattgaataatgtatgtat 10049753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 21662941 - 21662883
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||| ||||||    
T  21662941 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatt 21662883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 28406607 - 28406553
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 143  Q
    ||||||||||||||||||  |||| ||||||||| | |||| |||||||||||||    
T  28406607 cggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 53441915 - 53442045
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| |||||  | |||||||||| ||| ||||  |||| | ||||||||||| ||  ||||  || |  || ||  ||||||||||| ||     
T  53441915 cggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatt 53442014  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||||||||||||||    
T  53442015 taaaaagtcaactttttcttataaataggac 53442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 1122417 - 1122360
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||||   |||| |||||||||||||||| || ||| |||||||    
T  1122417 ttcggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatgtat 1122360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 29019873 - 29019820
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  29019873 gtcctatttacaagagaaaattgactttttagatacattgaataatatatgtat 29019820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 29457850 - 29457974
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| |||||| || ||  || ||| |||| |||||    
T  29457850 gtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtcta-tttctagactaggtacatcaatcattgaatgaatcta 29457948  T
Q  191 aaaaatcaactttatcttataaatag 216  Q
    |||| | |||||| ||||||||||||    
T  29457949 aaaagttaactttttcttataaatag 29457974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 49885475 - 49885392
Alignment:
Q  132 ataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatag 216  Q
    |||||| ||||||||||| ||  |||| ||||||||| ||  |||||| |||| ||||||||||| || ||| ||||||||||||    
T  49885475 ataattgatgtatttggtctat-ttctagactagatacatcaattattgaatgaatctaaaaaattaattttttcttataaatag 49885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 5347878 - 5347733
Alignment:
Q  73 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 172  Q
    ||||||||||| | | |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  5347878 aaaaaattactccctccggtcctatttacaagagacaatttactttt-agatacattaaataatttatgtatttggtttaggttcttgactagatacata 5347780  T
Q  173 cattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||    
T  5347779 cattattgaatgtatctaaaaagtcaactttctcttataaataggac 5347733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 23248808 - 23248678
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||    
T  23248808 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattattcaatgtatc 23248709  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| ||||||||||||| ||||||||||    
T  23248708 taaaaagtcaactttatcttgtaaataggac 23248678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 12763235 - 12763380
Alignment:
Q  87 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 186  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12763235 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 12763334  T
Q  187 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  12763335 tctaaaaagtcaattttctcttgtaaataagaccggagggagtatt 12763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 3411322 - 3411469
Alignment:
Q  71 ataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaa 170  Q
    |||||| | |||||| | ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |    
T  3411322 ataaaataatacttcttccggtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaggtaca 3411421  T
Q  171 tacattattcaatgtatctaaaaaatcaactttatcttataaatagga 218  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  3411422 tacattattcaatgtatctaaaaagtcaaatttctcttataaatagga 3411469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 30866253 - 30866396
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  30866253 cggtcctatttaaaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatc 30866352  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    ||||||||||||||| |||| |||||| |||  |||| ||||||    
T  30866353 taaaaaatcaactttctcttgtaaataagaccggagggagtatt 30866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 29770350 - 29770460
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||| |||    
T  29770350 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatgcattattcaatgtatctaaaaagtcaactttaactt 29770449  T
Q  209 ataaataggac 219  Q
    |||||||||||    
T  29770450 ataaataggac 29770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 7463457 - 7463599
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||    
T  7463457 cggtcctatttacaagaaacaatttactttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatc 7463556  T
Q  189 taaaaaa-tcaactttatcttataaataggactagaggaagta 230  Q
    ||||||| |||| ||| ||||||||||||||| ||||| ||||    
T  7463557 taaaaaagtcaattttctcttataaataggaccagagggagta 7463599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 32050214 - 32050093
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  32050214 tatttacaagagacaatttactttttagatatattaaataatttatgtatttggtgtaggttcttgagtagatacatacattattcaatatatctaaaaa 32050115  T
Q  195 atcaactttatcttataaatag 216  Q
    ||||| ||| ||||||||||||    
T  32050114 atcaattttctcttataaatag 32050093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 19979627 - 19979491
Alignment:
Q  96 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 195  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  19979627 atttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaa 19979528  T
Q  196 -tcaactttatcttataaataggactagaggaagtat 231  Q
     | |||||| |||||||||||  |||||||| |||||    
T  19979527 gttaactttctcttataaatataactagagggagtat 19979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 95 - 219
Target Start/End: Complemental strand, 34281803 - 34281679
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 194  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||    
T  34281803 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatgtaaaaa 34281704  T
Q  195 atcaactttatcttataaataggac 219  Q
     |||||||| |||| ||||||||||    
T  34281703 gtcaactttctcttgtaaataggac 34281679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 5909620 - 5909481
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  5909620 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattatt 5909521  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
     |||||||||||||  |||| ||| |||| ||||||||||    
T  5909520 gaatgtatctaaaaggtcaattttctcttgtaaataggac 5909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 12426679 - 12426544
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | ||||| |||||||||||   | ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||||||||    
T  12426679 tacttcctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattatt 12426580  T
Q  180 caatgtatctaaaaaatcaactttatcttataaata 215  Q
    ||||||||||||||||| |||||| |||||||||||    
T  12426579 caatgtatctaaaaaattaactttctcttataaata 12426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 20397823 - 20397953
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| ||||   |||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||    
T  20397823 cggtcctatttataagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatc 20397922  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  20397923 taaaaagtcaactttctcttgtaaataggac 20397953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 35427799 - 35427669
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||| |||||||     
T  35427799 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgtttttgactatatacatacattattgaatgtatt 35427700  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    ||||| ||||| |||||||||||||||||||    
T  35427699 taaaagatcaattttatcttataaataggac 35427669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 35611886 - 35611774
Alignment:
Q  365 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattatttgtacttgttcttgttattgctgtttttgta 464  Q
    |||| |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |    
T  35611886 ctctttctaatatgctaaaaaaatcatcttcttcatccttaccttattattctcactccacccattgtttgtacttgttcttgttattgctgtttttgaa 35611787  T
Q  465 tatacccataact 477  Q
     ||||||||||||    
T  35611786 catacccataact 35611774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 3614661 - 3614773
Alignment:
Q  365 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattatttgtacttgttcttgttattgctgtttttgta 464  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||  |    
T  3614661 ctctttctaatatgctacaaaaatcatcttcttcatccttaccttattattctcactccacccattgtttgtacttgttcttgttactgctgttttttaa 3614760  T
Q  465 tatacccataact 477  Q
     ||||||||||||    
T  3614761 catacccataact 3614773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 10599453 - 10599325
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    ||||||||||||||   |||||| |||||||||||||  ||||||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  10599453 tcctatttacaagagacaatttattttttagatacatacaataatttatgtatttggtttaggtgtttgactagatacatacattattcaatgtatctaa 10599354  T
Q  192 aaaa-tcaactttatcttataaataggac 219  Q
    |||| ||||||||||||| ||||||||||    
T  10599353 aaaagtcaactttatcttgtaaataggac 10599325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 7107638 - 7107781
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||| |||||||||||   |||| | |||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||    
T  7107638 cggtcatatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaatgtatc 7107737  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||| |||||||| |||| ||||||||||  |||| ||||||    
T  7107738 taaaaagtcaactttctcttgtaaataggaccggaggtagtatt 7107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 46680968 - 46680840
Alignment:
Q  90 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 189  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||| |||||| | || ||||||||||||||| ||||||| |||||||| |||    
T  46680968 ggtcttatttacaagaaacaatttactttttagatacattaaataatttatatatttgatttaagttcttgactagatatatacattcttcaatgtgtct 46680869  T
Q  190 aaaaaatcaactttatcttataaatagga 218  Q
    ||||| |||| |||||| | |||||||||    
T  46680868 aaaaagtcaattttatcatgtaaatagga 46680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 12085142 - 12085034
Alignment:
Q  111 tttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttat 210  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||| |  ||| ||||||||||||||||||||||| | |||| ||| |||| |    
T  12085142 tttattttttagatacattaaataatttatgtatttgatttaggttcttgatttaatacatacattattcaatgtatctaaacagtcaattttctcttgt 12085043  T
Q  211 aaataggac 219  Q
    |||||||||    
T  12085042 aaataggac 12085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 15074630 - 15074729
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||||||||||||  |||||||||     ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||    
T  15074630 cggtcctatttacaagaaacaatttactt-----atacattaaataatttatgtatttggtttaagttcttgactagatacatacattattcgatgtatc 15074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 5569116 - 5569007
Alignment:
Q  365 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattatttgtacttgttcttgttattgctgtttttgta 464  Q
    |||| |||||||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||| ||| || || |||||||||||| |||||||| |    
T  5569116 ctctttctaatatgctacaaaaat---cttcttcatccttaccttattattctcactccacccattgtttatagtttttcttgttattgttgtttttgaa 5569020  T
Q  465 tatacccataact 477  Q
     ||||||||||||    
T  5569019 catacccataact 5569007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 6173938 - 6174072
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||| ||| ||||| |||||||||||   ||||||  |||||||||||   ||  ||||||||||||||| |||||||||||||||||| ||||||||||    
T  6173938 tactccatccggtcatatttacaagagacaatttatattttagataca---aaggatttatgtatttggtttaggttcttgactagatacatacattatt 6174034  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||||||||||||||| |||  || |||||||||||||||    
T  6174035 caatgtatctaaaaaaacaa--ttctcttataaataggac 6174072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 17351627 - 17351486
Alignment:
Q  73 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 172  Q
    |||||| |||| ||| |||||||||||| ||||   |||| | ||||||||||| |||||||||||||||||||  | ||| ||||||| |||||| |||    
T  17351627 aaaaaaatactccatccggtcctatttaaaagagacaattaattttttagatacgttaaataatttatgtatttatt-tagattcttgagtagatacata 17351529  T
Q  173 cattattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
     |||||||||||||||||| ||||||||||| || ||||||||    
T  17351528 aattattcaatgtatctaacaaatcaactttctcctataaata 17351486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 26563932 - 26564059
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||| ||||||||||  |||| |||||||||||| ||| ||||| ||||||||||||| ||| |||| ||| |||||  || |||||||||||||||| |    
T  26563932 tcctttttacaagaagcaattaactttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctga 26564031  T
Q  192 aaaatcaactttatcttataaataggac 219  Q
    ||| |||| | | |||| ||||||||||    
T  26564032 aaagtcaattgtttcttgtaaataggac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 46449913 - 46449805
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||||||   |||| | |||||| |||||||||||||||||| |||||||| ||| || || | || ||| ||| ||||||||||||||||||||    
T  46449913 ctatttacaagagacaattaattttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaatgtatctaaaa 46449814  T
Q  194 aatcaactt 202  Q
    | |||||||    
T  46449813 agtcaactt 46449805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 4826901 - 4826760
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||  || ||  |||||| |||| |||    
T  4826901 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaagtacatcaattattgaatgaatc 4826803  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    |||||| | |||||| |||||||||||||||| |||| |||||    
T  4826802 taaaaagttaactttttcttataaataggactggaggtagtat 4826760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 8566114 - 8566219
Alignment:
Q  114 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaa 213  Q
    ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||| |||||||||||||| ||| |||||||||    
T  8566114 acttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatcaaatttttcttataaa 8566213  T
Q  214 taggac 219  Q
    ||||||    
T  8566214 taggac 8566219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 36655436 - 36655493
Alignment:
Q  158 ttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    ||||||||||| ||||||| ||||||||||||||||| |||| ||| |||| ||||||    
T  36655436 ttgactagatacatacattgttcaatgtatctaaaaattcaattttctcttgtaaata 36655493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 18672241 - 18672102
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 179  Q
    |||||| | ||||||| ||||||| ||  |||| || ||||||||||||| ||||||||||||||  ||| ||| |||| | | | ||| ||| ||||      
T  18672241 tacttcttccggtcctttttacaaaaaaaaattgacattttagatacattgaataatttatgtatccggtttagattctaggc-acatacataaattaaa 18672143  T
Q  180 caatgtatctaaaaaatcaactttatcttataaataggact 220  Q
    |||||||||||||||||||| |   |||| |||||||||||    
T  18672142 caatgtatctaaaaaatcaattgcttcttgtaaataggact 18672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 7107770 - 7107715
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   | || |||||||||||||||| ||||||||||||||    
T  7107770 cggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtat 7107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 10007627 - 10007714
Alignment:
Q  132 ataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||| ||||||||||||| ||  ||||  || ||||| ||  ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  10007627 ataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggac 10007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 22055867 - 22055760
Alignment:
Q  92 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 191  Q
    |||||||||||| ||  |||| ||||||||  || ||| |||||||||| |||||||| ||  ||||| |||  ||| ||| |||||||||| |||||||    
T  22055867 tcctatttacaaaaaacaattgactttttacgtatattgaataatttatttatttggtttaaattctttactgaatacataaattattcaatatatctaa 22055768  T
Q  192 aaaatcaa 199  Q
    ||| ||||    
T  22055767 aaagtcaa 22055760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 26564059 - 26563956
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||||  |||| |||||| ||||||||| ||||||||| |||| |||| |||  |||  || | ||| |||  ||||||||| ||||||    
T  26564059 gtcctatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatcta 26563960  T
Q  191 aaaa 194  Q
    ||||    
T  26563959 aaaa 26563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 41422987 - 41423086
Alignment:
Q  265 gtgaatgtattataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 364  Q
    ||||||| || |||| |||||||| ||||| ||||||||||| || |||| ||||| || | | |||||||||||| ||| || |||| |||| ||||||    
T  41422987 gtgaatgcatgatagaatctataagcttgtttaatctaatggataaaaatgttggttcagtatagaccaatacatctatgagtccatgctaaatggcacc 41423086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 29365714 - 29365772
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||| |||||| ||||||||| |||| ||| ||||||| ||||||||||||| ||||||    
T  29365714 attactcaatgaatctaaaaagtcaattttttcttatatataggactagagggagtatt 29365772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 36245384 - 36245514
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||| |||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||| |||    
T  36245384 cggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatc 36245483  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| ||| |||||||||||||||    
T  36245484 taaaaagtcaattttttcttataaataggac 36245514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 2523863 - 2523908
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggac 219  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||    
T  2523863 attactcaatgaatctaaaaagtcaactttttcttataaataggac 2523908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 12085023 - 12085088
Alignment:
Q  80 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatt 145  Q
    |||| ||| |||||||||||||||||   |||| ||| |||||||||||| |||||| ||||||||    
T  12085023 tactccatccggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtatt 12085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 23248676 - 23248733
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 146  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| |||||||||    
T  23248676 cggtcctatttacaagataaagttgactttttagatacattgaataatatatgtattt 23248733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 23871034 - 23870993
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  23871034 attattcaatgtatcgaaaaaatcaaatttttcttataaata 23870993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 28677325 - 28677454
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||  |||    
T  28677325 cggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatc 28677424  T
Q  189 taaaaaatcaactttatcttataaatagga 218  Q
    |||||| |||| ||| ||||||||||||||    
T  28677425 taaaaagtcaattttttcttataaatagga 28677454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 41850651 - 41850610
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    ||||||||||| ||||||||||| |||||| |||||||||||    
T  41850651 attattcaatgaatctaaaaaattaactttttcttataaata 41850610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 22629289 - 22629201
Alignment:
Q  276 ataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 364  Q
    |||||||||||||  ||||  ||  ||||||| | |||||||| |||| | |||||||||||||| ||| || |||| |||||||||||    
T  22629289 ataggatctataagtttgttcaagttaatggtcaaaaatcttgatccagtatggaccaatacatctatgagtccatgctaaacggcacc 22629201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 32903572 - 32903644
Alignment:
Q  131 aataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaacttt 203  Q
    |||||||||||||| |  | ||| ||||||| |||| | ||| ||| | ||||||||||||||||||||||||    
T  32903572 aataatttatgtatcttatttagattcttgattagaaacataaattgtccaatgtatctaaaaaatcaacttt 32903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 46449811 - 46449843
Alignment:
Q  114 actttttagatacattaaataatttatgtattt 146  Q
    |||||||||||||||| ||||||||||||||||    
T  46449811 actttttagatacattgaataatttatgtattt 46449843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 453 - 594
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||    
T  453 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttcgtttaggttcttgactagatacatacattattcaatgtatcta 552  T
Q  191 aaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||| |||| ||| |||| ||||||||||  |||| ||||||    
T  553 aaaagtcaattttctcttgtaaataggaccggagggagtatt 594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 583 - 528
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 144  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  583 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1903 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold1903
Description:

Target: scaffold1903; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 963 - 851
Alignment:
Q  365 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactccatccattatttgtacttgttcttgttattgctgtttttgta 464  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |    
T  963 ctctttctaatatgctacaaaaatcatcttcttcatccataccttattattctcactccacccattgtttgtacttgttcttgttattgctgtttttgaa 864  T
Q  465 tatacccataact 477  Q
     |||| |||||||    
T  863 catactcataact 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 38833 - 38976
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  38833 cggtcctagttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 38932  T
Q  189 taaaaaatcaactttatcttataaataggactagaggaagtatt 232  Q
    |||||  |||||| | |||| ||||||||||  |||| ||||||    
T  38933 taaaatgtcaactgtctcttgtaaataggaccggagggagtatt 38976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 11038 - 11168
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||| |||||||||||||||    
T  11038 cggtcctttttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgattagatacatatattattcaatgtatc 11137  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||||||| |||| ||||||||||    
T  11138 taaaaagtcaactttctcttgtaaataggac 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 15165 - 15292
Alignment:
Q  91 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 190  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||    
T  15165 gtcctatttacaataaacaatttgctttttagatacattaaataatttatgtatttggtttaggttcttgacta-atacgtacattattcaatgtatcta 15263  T
Q  191 aaaaatcaactttatcttataaataggac 219  Q
    |||| | |||||| |||| ||||||||||    
T  15264 aaaagttaactttctcttgtaaataggac 15292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 35962 - 36092
Alignment:
Q  89 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 188  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| || ||||||| |||| |||    
T  35962 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtattttgtttaggttcttaactagatacatgcattattgaatgcatc 36061  T
Q  189 taaaaaatcaactttatcttataaataggac 219  Q
    |||||| |||| ||| |||| ||||||||||    
T  36062 taaaaagtcaattttctcttgtaaataggac 36092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 407 - 516
Alignment:
Q  109 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 208  Q
    ||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||    
T  407 aatttactttttagatatattaaataatttatatatatggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaaccttctctt 506  T
Q  209 ataaatagga 218  Q
     |||||||||    
T  507 gtaaatagga 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 77458 - 77355
Alignment:
Q  116 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 215  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||||||||||| |||| |||||||| |||||||||||    
T  77458 tttttagatacattaaataatttatgtatttggtttagattcttgactacatacataaattattcaatgtatctgaaaagtcaactttctcttataaata 77359  T
Q  216 ggac 219  Q
    ||||    
T  77358 ggac 77355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 95 - 219
Target Start/End: Complemental strand, 3774 - 3641
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttat---------gtatttggtgtaggttcttgactagataaatacattattcaatgt 185  Q
    |||||||||||   ||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||| ||| ||||||||||||||||    
T  3774 tatttacaagagacaatttactttttagatacattaaataatttatataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgt 3675  T
Q  186 atctaaaaaatcaactttatcttataaataggac 219  Q
    ||||||||| |||||||| | |||||||||||||    
T  3674 atctaaaaagtcaactttcttttataaataggac 3641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 5229 - 5351
Alignment:
Q  94 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    |||||||||||||  ||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||| ||| ||| |||||||||| |||||||||    
T  5229 ctatttacaagaaacaatttacttttttaatatattaaataatttatatatttggtttaggttcttgactaaatacatatattattcaatttatctaaaa 5328  T
Q  194 aatcaactttatcttataaatag 216  Q
    | | || ||| |||| |||||||    
T  5329 agttaattttctcttgtaaatag 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 183926 - 183828
Alignment:
Q  95 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 193  Q
    ||||||||| |||||||| |||||||| ||| ||| ||||||||||||||   || ||| || ||||| | ||| ||| |||||||||||||| |||||    
T  183926 tatttacaaaaattaattaactttttaaatatattgaataatttatgtatcaagtttagatttttgaccaaatacataaattattcaatgtatttaaaa 183828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 54721 - 54646
Alignment:
Q  74 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 149  Q
    ||||| |||||| | || ||||||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||    
T  54721 aaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 54646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 16562 - 16505
Alignment:
Q  174 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 231  Q
    |||||| |||| ||||||||||| |||||| |||| ||||||||||| |||| |||||    
T  16562 attattgaatgaatctaaaaaattaactttttcttgtaaataggactggaggtagtat 16505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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