View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19814_low_10 (Length: 291)
Name: NF19814_low_10
Description: NF19814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19814_low_10 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 12 - 289
Target Start/End: Complemental strand, 4019711 - 4019434
Alignment:
| Q |
12 |
aagaaaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatca |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4019711 |
aagaaaataaaagcctttgttgatgatgagcttaagaggggagatgaaatactacaatcacttgtcagaggaattgaaggatcattaatttccttgatca |
4019612 |
T |
|
| Q |
112 |
tattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctatttt |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4019611 |
tattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacaaattgttgtacctatttt |
4019512 |
T |
|
| Q |
212 |
ttatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaacatcaaagagtgta |
289 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4019511 |
ttatgggatagatcctgcagatgtaagatatcaaatgaagagttatgaaaatgcatttgttgaacatcaaagagtgta |
4019434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 12 - 285
Target Start/End: Original strand, 3962364 - 3962637
Alignment:
| Q |
12 |
aagaaaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatca |
111 |
Q |
| |
|
|||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| |
|
|
| T |
3962364 |
aagaaaataaaagcctttgtagatgataaacttaagaggggagatgaaataccacaatcacttgtcagagcaattgaaggatcgttaatttccttgatca |
3962463 |
T |
|
| Q |
112 |
tattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctatttt |
211 |
Q |
| |
|
|||| ||||| ||||||||||||||| | |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
3962464 |
tattttcacacgactatgcttcttcatgttggtgtttagaagaacttgttacaacacttcaatgcagagagaaatatggacagatcgttatacctatttt |
3962563 |
T |
|
| Q |
212 |
ttatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaacatcaaagag |
285 |
Q |
| |
|
|||| || |||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
3962564 |
ttatcaggtagatcctacagatgtaagatatcaaaacaagagttatgataatgcatttgttgaactccaaagag |
3962637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 3825950 - 3825751
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
3825950 |
aaataaaagcctttgttgatgatgaacttaagaggggagatgaaataccacaatcacttgtaagaggaaatgaaggatcattaatttccttgatcatatt |
3825851 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
3825850 |
ctcacaagactatgcttcttcatgttggtgtttagaagaacatgtcacaatacgtcaatgcagagagaaatatggacaaattgttatacctgttttttat |
3825751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 275
Target Start/End: Complemental strand, 3805977 - 3805724
Alignment:
| Q |
12 |
aagaaaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatca |
111 |
Q |
| |
|
|||||| ||||| |||| || |||||||| ||||| |||||||||||||||||||||||||||| || |||||| | ||| ||||||||||| |
|
|
| T |
3805977 |
aagaaattaaaacccttcgtagatgatgaacttaaaaggggagatgaaataccacaatcacttgtca---------aaggattattaacttccttgatca |
3805887 |
T |
|
| Q |
112 |
tattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctatttt |
211 |
Q |
| |
|
|| | ||| ||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
3805886 |
taat-tcagaaggctatgcttcttcatgttggtgtttggacgaacttgtcacaatacttcaatgcagaaagaaatatggacagattgttatacctatttt |
3805788 |
T |
|
| Q |
212 |
ttatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaa |
275 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3805787 |
ttatgggatagatcctgcagatgtaagatatcaaatgaagggttatgaaaatgcatttgttgaa |
3805724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 3792797 - 3792676
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
3792797 |
aaataaaagcctttgttgatgatgaacttaagaggggagatgaaataccacaatcacttgtaagaggaaatgaaggatcattaatttccttgatcatatt |
3792698 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttca |
137 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
3792697 |
ctcacaagactatgcttcttca |
3792676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 4011910 - 4011650
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| |||||||||||||| | ||||||||||||||||| || |||| ||||||| || |||||||||||| | ||||| ||| ||||||| |
|
|
| T |
4011910 |
aaataaatgcctttgttgatgagaaacttaagaggggagatgacatgtcacattcacttgttgaagcaattgaaggatctcccatttcattggtcatatt |
4011811 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || ||||||||| ||||| |||||||| |||||||||| | |||| || | |||| ||||||||||||||||||||| ||||| |||| ||| |
|
|
| T |
4011810 |
ctcataaaactatgcttgttcacattggtgtttagaagaacttgcgaaaataattgagtgcaaagagaaatatggacagattgtaatacctgttttctat |
4011711 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaac |
276 |
Q |
| |
|
| | |||||||| || ||| | || |||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4011710 |
ggggtagatcctacaaatgtacgacatcaaaagaagagttatgaaaatgcatttgctgaac |
4011650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 272
Target Start/End: Complemental strand, 4220907 - 4220677
Alignment:
| Q |
42 |
cttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgct |
141 |
Q |
| |
|
||||||| |||||||| ||| |||| |||||||| || ||||||||||||| ||||| ||| |||||||||| || ||||||||||||||| | |
|
|
| T |
4220907 |
cttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacatt |
4220808 |
T |
|
| Q |
142 |
ggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagata |
241 |
Q |
| |
|
||||||| ||||||||||| | |||| || | |||||||||||||||||||| |||| |||||||||| || ||| |||||||| || ||| | |||| |
|
|
| T |
4220807 |
ggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttgtaatacctattttctacgaggtagatcctacaaatgtacgata |
4220708 |
T |
|
| Q |
242 |
tcaaatgaagagttatgaaaatgcatttgtt |
272 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |
|
|
| T |
4220707 |
tcaaaagaagagttatgaaaatgcatttgtt |
4220677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 16 - 257
Target Start/End: Complemental strand, 4003431 - 4003190
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| ||||||||||| || | ||||||||||||||||| ||| |||| |||||| || ||||||||||||| | ||||| ||| ||||||| |
|
|
| T |
4003431 |
aaataaatgcctttgttgacgaaaaacttaagaggggagatgatatatcacatgcacttgtagaagcaattgaaggatcattcatttcattggtcatatt |
4003332 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || ||||||||||||||| |||||||| ||||||||||| | |||| || | |||| |||||||||||||| ||||||| ||||| |||| ||| |
|
|
| T |
4003331 |
ctcagaaaactatgcttcttcacattggtgtttagaagaacttgtgaaaataattgagtgcaaagagaaatatggacggattgttttacctgttttctat |
4003232 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttat |
257 |
Q |
| |
|
| | |||||||| || ||| |||| |||||| |||||||||| |
|
|
| T |
4003231 |
ggggtagatcctacaaatgtaagacatcaaaagaagagttat |
4003190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 83 - 271
Target Start/End: Original strand, 3953041 - 3953229
Alignment:
| Q |
83 |
aattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagag |
182 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||||| || |||||||||||||||| |||||||| ||||||||||| | |||| || | ||||||||| |
|
|
| T |
3953041 |
aattgaaggatcgttcatttcattgatcatattctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataattgagtgcagagag |
3953140 |
T |
|
| Q |
183 |
aaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgt |
271 |
Q |
| |
|
||| ||||||||||||| ||||| |||| || ||| ||| |||| |||||| | || |||||| ||||||||||||||||||| |||| |
|
|
| T |
3953141 |
aaaaatggacagattgtaatacctgttttctacgaggtaggtcctacagatgtacgacatcaaaagaagagttatgaaaatgcacttgt |
3953229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 4026667 - 4026407
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| |||||||||||||| | ||||||||||||||||| ||| | | ||||||| || ||| ||||||||| | ||||| ||||||||||| |
|
|
| T |
4026667 |
aaataaatgcctttgttgatgacaaacttaagaggggagatgacatatcgaattcacttgtagaagcaatagaaggatcattcatttcattgatcatatt |
4026568 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || |||||||||||||| | |||||||| ||||||||| | | |||| || | |||| ||||||||||||||||||||| ||||| |||| ||| |
|
|
| T |
4026567 |
ctcagaaaactatgcttcttcaagttggtgtttagaagaacttttgaaaataattgattgcaaagagaaatatggacagattgtaatacctgttttctat |
4026468 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaac |
276 |
Q |
| |
|
| | |||||||| || | | | || ||| || |||||||||| ||||||||||| ||||| |
|
|
| T |
4026467 |
ggggtagatcctacaaacgtacgacatctaaaaaagagttatggaaatgcatttgctgaac |
4026407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 3812122 - 3811860
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| |||||| ||||||| | ||||||||||||||||| ||| |||| ||||||| || ||| |||||||| | ||||| ||| ||||||| |
|
|
| T |
3812122 |
aaataaatgcctttcttgatgagaaacttaagaggggagatgacatatcacattcacttgtagaagcaatggaaggatctcccatttcattggtcatatt |
3812023 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || ||||||||||||||| |||||||| || || ||||| | |||| || | |||| ||||| ||||||||| |||| |||||||||| || |
|
|
| T |
3812022 |
ctcagaaaactatgcttcttcacattggtgtttagatgagcttgtgaaaataattgagtgcaaagagacatatggacattttgtaatacctattttctac |
3811923 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaacat |
278 |
Q |
| |
|
| |||||||| |||||| | || |||||| ||||||||||||||||||||| | ||||||| |
|
|
| T |
3811922 |
ggagtagatcctacagatgtacgacatcaaaagaagagttatgaaaatgcattcgctgaacat |
3811860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 3915932 - 3916194
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| || ||||||||||| | ||||||||||||||||| ||| || | |||||||| || ||| ||||||||| | ||||| ||||||||||| |
|
|
| T |
3915932 |
aaataaatgcttttgttgatgacaaacttaagaggggagatgacatatcagattcacttggtgaagcaatcgaaggatcattcatttcattgatcatatt |
3916031 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || ||||||||| ||||| |||||||| |||||||||| | |||| || | || | ||||||||||| ||| ||||| ||||| |||| | |
|
|
| T |
3916032 |
ctcagaaaactatgcttgttcacattggtgtttaaaagaacttgtgaaaatagttgagtgtaaagagaaatatgcacaaattgtaatacctgttttcttc |
3916131 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaacat |
278 |
Q |
| |
|
| |||||||| ||||| | || |||||| | |||||||||||||||||||| ||||||| |
|
|
| T |
3916132 |
agggtagatcctacagatatacgacatcaaaaaaggagttatgaaaatgcatttgctgaacat |
3916194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 269
Target Start/End: Complemental strand, 3821695 - 3821442
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| |||||||||||||| | |||| |||||||||||| ||| |||| |||||| || |||||||||||| | ||||| ||| ||||||| |
|
|
| T |
3821695 |
aaataaatgcctttgttgatgacgcacttacgaggggagatgacatatcacattcactttttgaagcaattgaaggatctcccatttcattggtcatatt |
3821596 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || ||||||||||||||| |||||||| || || ||||| | |||| | | |||| ||||||||||||||||||||| |||||||||| || |
|
|
| T |
3821595 |
ctcaaaaaactatgcttcttcacattggtgtttagatgagcttgtgaaaataatcgagtgcaaagagaaatatggacagattgtattacctattttctac |
3821496 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcattt |
269 |
Q |
| |
|
| || | || || ||| | || |||||| |||||||||||||||||||||| |
|
|
| T |
3821495 |
ggagtaaaacccacaaatgtacgacatcaaaagaagagttatgaaaatgcattt |
3821442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 3948350 - 3948274
Alignment:
| Q |
213 |
tatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaacatcaaagagtgta |
289 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||||| |||| |
|
|
| T |
3948350 |
tatgaggtagatcctgcagatgtaagatatcaaatgaagggttatgaaaatgcatttgttgaataccaaagaatgta |
3948274 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 3960453 - 3960393
Alignment:
| Q |
229 |
cagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaacatcaaagagtgta |
289 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
3960453 |
cagatgtaagatatcaaaacaagagttatgattatgcatttggttaacatcaaagagtgta |
3960393 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 3988293 - 3988176
Alignment:
| Q |
43 |
ttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgctg |
142 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| || ||||||||| || ||||||| ||| ||||||||||| || | ||| ||||||||| || |
|
|
| T |
3988293 |
ttaagaggggagatgaaatcaaacattcacttgttgaagcaattgaaggctcgttaatttcattggtcatattctcaaaaaattattcttcttcacattg |
3988194 |
T |
|
| Q |
143 |
gtgtttggaagaacttgt |
160 |
Q |
| |
|
|||||| || |||||||| |
|
|
| T |
3988193 |
gtgtttagatgaacttgt |
3988176 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 13399272 - 13399012
Alignment:
| Q |
16 |
aaataaaagcctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatatt |
115 |
Q |
| |
|
||||||| | ||||||||| || | |||||||||||| |||| ||| |||| |||||| || ||| ||||||||| | ||||| ||||||||||| |
|
|
| T |
13399272 |
aaataaatgtctttgttgacgacaaacttaagaggggaaatgacatatcacattcactttttgaagcaatcgaaggatcatttatttcattgatcatatt |
13399173 |
T |
|
| Q |
116 |
ctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
215 |
Q |
| |
|
|||| || |||||||||||||||| |||||||| ||||||||||| | |||| || | |||| ||||||||||||||| ||||| ||||| |||| || |
|
|
| T |
13399172 |
ctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataattgagtgcaaagagaaatatggacaaattgtaatacctgttttctac |
13399073 |
T |
|
| Q |
216 |
gagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttgaac |
276 |
Q |
| |
|
| ||||||| | |||| | || |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13399072 |
ggagtagatcccaccgatgtacgacatcaaaagaagagttatgaaaatgcatttgttgaac |
13399012 |
T |
|
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Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 42862390 - 42862281
Alignment:
| Q |
51 |
ggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgctggtgtttgg |
150 |
Q |
| |
|
|||||||||||| || || |||||| || || |||||||||||||| || || ||||| ||||| || ||||||||||||||||| ||||| |||| |
|
|
| T |
42862390 |
ggagatgaaatatcaaaagcacttgtcaaagccattgaaggatcactcatgtctttgataatattttccaaagactatgcttcttcaaagtggtgcttgg |
42862291 |
T |
|
| Q |
151 |
aagaacttgt |
160 |
Q |
| |
|
|||| ||||| |
|
|
| T |
42862290 |
aagagcttgt |
42862281 |
T |
|
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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 7087050 - 7086962
Alignment:
| Q |
109 |
tcatattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagatt |
197 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||||| || ||||||| ||| || | || ||||||||| ||||||||||| |
|
|
| T |
7087050 |
tcatattctctcaaaactatgcttcttcaaaatggtgtttggatgagcttgtcaaaattgttgagtgtagagagaaagatggacagatt |
7086962 |
T |
|
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