View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19825_high_8 (Length: 432)
Name: NF19825_high_8
Description: NF19825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19825_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 401; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 44585558 - 44585146
Alignment:
| Q |
1 |
caccaataatcaacacatgaacaagacacgttcttgaaatggtgaaatcgactgttatccctcacaatgatttcccttccaacaatctttgtaataaatt |
100 |
Q |
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|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
44585558 |
caccaataatcaccacatgaacaagacccgttcttgaaatggtgaaatcgactgttatccctcacagtgatttcccttccaacaatctttgtaataaatt |
44585459 |
T |
|
| Q |
101 |
taattgcagtatggcagtctgcgcacactcgaatgttctttatcactcggatggttgtaccagcagtagtgctaatgatgccatatgctatggcaagtct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44585458 |
taattgcagtatggcagtctgcgcacactcgaatgttctttatcactcggatggttgtaccagcagtagtgctaatgatgccatatgctatggcaagtct |
44585359 |
T |
|
| Q |
201 |
ctcactatgattgtgtaacaactcgcgtttaagttcctcatcaacatcatggagcacctgatttgtgtcaatgacataaccttctttctccatctgttcc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44585358 |
ctcactatgattgtgtaacaactcgcgtttaagttcctcatcaacatcatggagcacctgatttgtgtcaatgacataaccttctttctccatctgttcc |
44585259 |
T |
|
| Q |
301 |
aataaaacatccaatgccttgtttattttgtcgtaataaggatgtgatttatctccagccataaaagtatgcacttgatttccaacttctatccagctgc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44585258 |
aataaaacatccaatgccttgtttattttgtcgtaataaggatgtgatttatctccagccataaaagtatgcacttgatttccaacttctatccagctgc |
44585159 |
T |
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| Q |
401 |
atgcaggggtttt |
413 |
Q |
| |
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||||||||||||| |
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| T |
44585158 |
atgcaggggtttt |
44585146 |
T |
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