View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19825_low_26 (Length: 260)
Name: NF19825_low_26
Description: NF19825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19825_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 45293946 - 45294174
Alignment:
| Q |
1 |
atataactatgttgaactcatattcttgtccatcacatagtgatannnnnnnaagctaaaactgcataattcattaatttgcaagaaagtgagtgaaaag |
100 |
Q |
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| T |
45293946 |
atataactatgttgaactcatattcttgtccatcacatagtgatatttttttaagctaaaactgcataattcattaatttgcaagaaagtgagtgaaaag |
45294045 |
T |
|
| Q |
101 |
ggctttgcatacagttctatacaaagccctttcacaaatgcttcatgattttctgtgataatgcaagctaaaatgagtaatttcttcactcttatataaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
45294046 |
ggctttgcatacagttctatacaaagccctttcacaaatgcttcatgcttttctgtgataatgcaagctaaaatgggtaatttcttcactcttatataaa |
45294145 |
T |
|
| Q |
201 |
tccaaagtcaagtgtggatattttatagt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
45294146 |
tccaaagtcaagtgtggatattttatagt |
45294174 |
T |
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