View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19825_low_27 (Length: 259)
Name: NF19825_low_27
Description: NF19825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19825_low_27 |
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Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 45293699 - 45293459
Alignment:
| Q |
1 |
cctaacataatacttccagcaatactgctgctatcaatgaagttaataactattaagtaatattatgatattcctttttgtttctatcagtgaaataaat |
100 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45293699 |
cctaacataatacttccagtaatactgctgctatcaatgaagttaataactattaagtaatattatgatattcctttttgtttctatcagtgaaataaat |
45293600 |
T |
|
| Q |
101 |
gtatgtgatatcacaagagaacacatttttggaagaaaagaatagtttgggcaaactagtactagattagtcttttttgtttcacataagtcctataagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45293599 |
gtatgtgatatcacaagagaacacatttttggaagaaaagaatagtttgggcaaactagtactagattagtcttttttgtttcacataagtcctataagt |
45293500 |
T |
|
| Q |
201 |
cccattacgtgtacaatgttacccttttttacacattacgt |
241 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
45293499 |
cccattacgtgtacaatgttacccttttttacacattacgt |
45293459 |
T |
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