View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19825_low_28 (Length: 252)
Name: NF19825_low_28
Description: NF19825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19825_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 43542184 - 43542405
Alignment:
| Q |
16 |
ggagctcacaacattaatccatatatgactgaattaatcttgaacaaactatattatatgctacatatttgatgacataatggtaatgtttacaattatt |
115 |
Q |
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| T |
43542184 |
ggagctcacaacattaatccatatatgagtgaattaatcttgaacaaactatattatatgctacatatttgatgacataatggtaatgtttacaattgtt |
43542283 |
T |
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| Q |
116 |
atgaaggcaggtaaaagtagaggtacctatctgagttgaagcgaggttcttagacaagttgagtgtacatagttagaaaccaattattatgtcatggtgc |
215 |
Q |
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| T |
43542284 |
atgaagacaggtaaaagtagaggtacctatctgagttgaagcgaggttcttagacaagttgagtgtacatagttagaaaccaattattatgtcatggtgc |
43542383 |
T |
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| Q |
216 |
atgtaatgtgattagtgaagaa |
237 |
Q |
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| T |
43542384 |
atgtaatgtgattagtgaagaa |
43542405 |
T |
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