View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19825_low_38 (Length: 215)
Name: NF19825_low_38
Description: NF19825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19825_low_38 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 7666667 - 7666467
Alignment:
| Q |
15 |
atcagtttagtggtaatattccaaatttgaataatccttcattgatgatttttgatgtttcaaataataatttggaaggtgaagttcctcaaggtttgtt |
114 |
Q |
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| T |
7666667 |
atcagtttagtggtaatattccaaatttgaataatccttcattgatgatttttgatgtttcaaataataatttggaaggtgaagttcctcaaggtttgtt |
7666568 |
T |
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| Q |
115 |
gagattcaatggaaattcttttttaggaaattctggtttatgtggcgaaaaaatcggcaaaatatgtggacaacaaccagtgcaacaaacaaatcctatt |
214 |
Q |
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| T |
7666567 |
gagattcaatggaaattcttttttaggaaattctggtttatgtggcgaaaaaatgggcaaaatatgtggacaacaaccagtgcaacaaacaaatcctatt |
7666468 |
T |
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| Q |
215 |
c |
215 |
Q |
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| T |
7666467 |
c |
7666467 |
T |
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