View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19826_high_2 (Length: 334)
Name: NF19826_high_2
Description: NF19826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19826_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 14 - 318
Target Start/End: Complemental strand, 33461395 - 33461090
Alignment:
| Q |
14 |
aggtgtaggtatatacataaggggtaagaacttaacatgtagctgcttatataaaacaccaattaggaagataaagaagaaaagtactgtttattgagaa |
113 |
Q |
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| T |
33461395 |
aggtgtaggtatatacataaggggtaagaacttaacatgtagctgcttatataaaacaccaattaggaagataaagaagaaaagtactgtttattgagaa |
33461296 |
T |
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| Q |
114 |
taaaataatcagctac--tatactatcatttctctgacagtttctttgtagtacaaaagaagactttaattgataattaagttagaaaagattactgcta |
211 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33461295 |
taaaataatcagctaccatatactatcatttctctgacagtttctttgtagtacaaaagaagactttaattgataattaagttagaaaagattactgcta |
33461196 |
T |
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| Q |
212 |
tgatttannnnnnnnaatgcagaaagattactgctatgtgaaagtgaacttttaaaaggaaataagatacttctattaagggaagttgcatgaacacgta |
311 |
Q |
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|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33461195 |
tgattt-ttttttttaatgcagaaagattagtgctatgtgaaagtgaacttttaaaaggaaataagatacttctattaagggaagttgcatgaacacgta |
33461097 |
T |
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| Q |
312 |
agatttt |
318 |
Q |
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||||||| |
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| T |
33461096 |
agatttt |
33461090 |
T |
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