View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19827_high_1 (Length: 312)
Name: NF19827_high_1
Description: NF19827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19827_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 15 - 298
Target Start/End: Complemental strand, 21881668 - 21881385
Alignment:
| Q |
15 |
aaatatacccggctttctgaaactacatcaactccatttttagcatgctgcagcctctgaatcatggcaataagtgcagatcttgcatcgccttcctcat |
114 |
Q |
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| T |
21881668 |
aaatatacccggctttctgaaactacatcaactccatttttagcatgctgcagcctctgaatcatggcaataagtgcagatcttgcatcaccttcctcat |
21881569 |
T |
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| Q |
115 |
aaacactagtcaaatagttatgcatttctataacaccctgcagcattgatacatgttaaaaacttctaaaactgtgttacgtcgaggttaaaaagcaaaa |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
21881568 |
aaacactagtcaaatagttatgcatttctataacaccctgcagcattgatacatgttaaaaacttctaaaactgtgttaggtcgaggttaaaaagcaaaa |
21881469 |
T |
|
| Q |
215 |
agtttggtacttaatcttacatcactgtcatgttctgcaatatcatccataacacctttgaaccattcaaatgaagcttgttcc |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21881468 |
agtttggtacttaatcttacatcactgtcatgttctgcaatatcatccataacacctttgaaccattcaaatgaagcttgttcc |
21881385 |
T |
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