View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19828_high_49 (Length: 249)
Name: NF19828_high_49
Description: NF19828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19828_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 53308693 - 53308484
Alignment:
| Q |
1 |
tggggcactatatttgatgatacatatatatatttgattgatgttgagaaatgaaaatgtacatgtagtaagcacaaatgtcgggagtggtcagatagat |
100 |
Q |
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| T |
53308693 |
tggggcactatatttgatgatacatatatatatttgattgatgttgagaaatgaaaatgtacatgtagtaagcacaaatgtcgggagtggtcagatagat |
53308594 |
T |
|
| Q |
101 |
gtctagaatccaccccactctcgtggcttagttttactttttcaagatcatatttaatagtatacacaaatcctataactattactactaatttttccct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
53308593 |
gtctagaatccaccccactctcgtggcttagttttactttttcaagatcatatttaatagtatactcaaatcctataactattactactaatttttccct |
53308494 |
T |
|
| Q |
201 |
tataaaatat |
210 |
Q |
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|||||||||| |
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| T |
53308493 |
tataaaatat |
53308484 |
T |
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