View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19828_low_14 (Length: 483)

Name: NF19828_low_14
Description: NF19828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19828_low_14
NF19828_low_14
[»] chr5 (5 HSPs)
chr5 (188-375)||(3619143-3619330)
chr5 (35-178)||(3618895-3619037)
chr5 (389-470)||(3619388-3619469)
chr5 (54-138)||(7907930-7908015)
chr5 (49-114)||(13244483-13244548)
[»] scaffold0311 (1 HSPs)
scaffold0311 (59-138)||(10559-10638)
[»] chr3 (6 HSPs)
chr3 (59-138)||(27016392-27016470)
chr3 (44-114)||(26330250-26330320)
chr3 (35-92)||(30657381-30657438)
chr3 (44-92)||(20210855-20210903)
chr3 (48-92)||(41033187-41033231)
chr3 (35-91)||(44237513-44237569)
[»] chr4 (6 HSPs)
chr4 (48-138)||(2841675-2841765)
chr4 (77-138)||(9843213-9843274)
chr4 (54-119)||(18628490-18628555)
chr4 (49-130)||(46187841-46187922)
chr4 (44-92)||(22523775-22523823)
chr4 (98-138)||(27970107-27970147)
[»] scaffold0426 (1 HSPs)
scaffold0426 (54-123)||(4280-4349)
[»] chr2 (3 HSPs)
chr2 (49-122)||(40943978-40944051)
chr2 (118-178)||(1160741-1160800)
chr2 (35-131)||(6561393-6561489)
[»] scaffold0141 (1 HSPs)
scaffold0141 (44-92)||(9705-9753)
[»] chr7 (2 HSPs)
chr7 (54-161)||(33645897-33646004)
chr7 (59-131)||(23214911-23214983)
[»] chr6 (5 HSPs)
chr6 (58-138)||(10031781-10031861)
chr6 (101-144)||(20377904-20377947)
chr6 (48-131)||(27857414-27857497)
chr6 (35-93)||(7351589-7351647)
chr6 (98-139)||(31839268-31839309)
[»] scaffold0153 (2 HSPs)
scaffold0153 (107-178)||(6484-6554)
scaffold0153 (107-178)||(13504-13574)
[»] chr1 (1 HSPs)
chr1 (44-138)||(4868449-4868542)
[»] chr8 (3 HSPs)
chr8 (56-161)||(26410306-26410411)
chr8 (101-138)||(27119913-27119950)
chr8 (44-160)||(6950350-6950465)


Alignment Details
Target: chr5 (Bit Score: 168; Significance: 8e-90; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 188 - 375
Target Start/End: Original strand, 3619143 - 3619330
Alignment:
Q  188 gtaattaaattgtttatcaaaacaggtcttaatcatgtcatgtggaattgagaaaaatgcaggcggattttcctaattgccattgctaatttttaatcta 287  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3619143 gtaattaaattgtttatcaaaacaggtcttaataatgtcatattgaattgagaaaaatgcaggcggattttcctaattgccattgctaatttttaatcta 3619242  T
Q  288 cgtcccctacagttgttctcattttcacttctgtttaatataatcttagtgctattgtatagtagtagatattttggtcagttacttg 375  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3619243 cgtcccctaccgttgttctcattttcacttctgtttaatataatcttagtgctattgtatagtagtagatattttggtcacttacttg 3619330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 35 - 178
Target Start/End: Original strand, 3618895 - 3619037
Alignment:
Q  35 ctgtttaacttgatttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttg 134  Q
    |||||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  3618895 ctgtttaacttgatttatctgagtttatctgctaacataaaaacttgtgagactgtttacaaaagtttatgaaaacaactaacgacatatctataagtag 3618994  T
Q  135 tttttggctttatttccatatgctctctgtgattgcttatgaaa 178  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  3618995 tttttggc-ttatttccatatgctctctgtgattgcttatgaaa 3619037  T

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Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 3619388 - 3619469
Alignment:
Q  389 caaactatgaaggtgacattaatatttagaattcctctattggaagcaagtagaaacagaatggaaaaattgattatttcat 470  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3619388 caaactatgaagatgacattaatatttagaattcctctattggaagcaagtagaaacagaatggaaaaattgattatttcat 3619469  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 7908015 - 7907930
Alignment:
Q  54 tgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaac-taatgacatatctataagttgtttt 138  Q
    |||||||||||| | ||||||| ||||||||||||||||  || |  ||||||||||||| || ||| ||||  ||||||||||||    
T  7908015 tgagtttatctaataacataaacacttatgagactgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtttt 7907930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 13244483 - 13244548
Alignment:
Q  49 ttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaact 114  Q
    |||| |||||||||||| ||| ||||| |||||||| |||||||  || || ||||||||||||||    
T  13244483 ttatttgagtttatctattgaaataaacacttatgacactgtttggaagagcttatgaaaacaact 13244548  T

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Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 10559 - 10638
Alignment:
Q  59 ttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    |||| |||||||||||  |||| |||||||||||   |||| ||||| |||||||||||||||| || ||||||||||||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgtttt 10638  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 27016392 - 27016470
Alignment:
Q  59 ttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    ||||||||||| ||||  ||||||||||||||||  || |||||||| ||||| || ||||||||||||||| |||||||    
T  27016392 ttatctactga-ataagtacttatgagactgtttcaaagagtttatggaaacagctcatgacatatctataacttgtttt 27016470  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 26330250 - 26330320
Alignment:
Q  44 ttgatttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaact 114  Q
    ||||||||| |||| ||||||||||| ||||  | || |||||||||||| || || ||||||||||||||    
T  26330250 ttgatttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaact 26330320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 30657438 - 30657381
Alignment:
Q  35 ctgtttaacttgatttatctgagtttatctactgacataaagacttatgagactgttt 92  Q
    |||||| | ||||||||| |||||||||||||||||||||  |||| ||||| |||||    
T  30657438 ctgtttgaattgatttatttgagtttatctactgacataagcacttttgagattgttt 30657381  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 20210855 - 20210903
Alignment:
Q  44 ttgatttatctgagtttatctactgacataaagacttatgagactgttt 92  Q
    ||||||||| |||| ||||||||||||||||  |||| |||||||||||    
T  20210855 ttgatttatttgaggttatctactgacataaccacttgtgagactgttt 20210903  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 41033187 - 41033231
Alignment:
Q  48 tttatctgagtttatctactgacataaagacttatgagactgttt 92  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||    
T  41033187 tttatttgagtttatctactgacataaggactcgtgagactgttt 41033231  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 44237569 - 44237513
Alignment:
Q  35 ctgtttaacttgatttatctgagtttatctactgacataaagacttatgagactgtt 91  Q
    |||||||| ||| ||||| |||||||||||||||||||||  |||| ||| ||||||    
T  44237569 ctgtttaaattggtttatttgagtttatctactgacataagcacttgtgaaactgtt 44237513  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 2841765 - 2841675
Alignment:
Q  48 tttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    ||||| |||||||||| | ||||||||| |||  ||||| ||||| | | ||||||||||| ||||| ||||||| || ||||||||||||    
T  2841765 tttatttgagtttatccattgacataaaaactcgtgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgtttt 2841675  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 9843213 - 9843274
Alignment:
Q  77 acttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    |||| |||||||||||  || || ||| ||||||||||||| ||||||| ||||||||||||    
T  9843213 acttgtgagactgtttcaaagagattaagaaaacaactaatcacatatccataagttgtttt 9843274  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 18628490 - 18628555
Alignment:
Q  54 tgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatga 119  Q
    |||| ||||||||||||||||| |||| |||||||||||   | || |||||||||||||| ||||    
T  18628490 tgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 46187841 - 46187922
Alignment:
Q  49 ttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataa 130  Q
    |||| |||| |||||||||| |||||| |||||||||||||||||  |  ||||||| |||||| | |||| || |||||||    
T  46187841 ttatttgagcttatctactggcataaacacttatgagactgtttaagagggtttatggaaacaatttatgatatgtctataa 46187922  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 22523823 - 22523775
Alignment:
Q  44 ttgatttatctgagtttatctactgacataaagacttatgagactgttt 92  Q
    |||||||||  ||||||||||||||||||||  |||| |||||||||||    
T  22523823 ttgatttattcgagtttatctactgacataagtacttgtgagactgttt 22523775  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 27970147 - 27970107
Alignment:
Q  98 agtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    ||||||||||||||||| ||||||| |||||||| ||||||    
T  27970147 agtttatgaaaacaacttatgacatgtctataagctgtttt 27970107  T

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Target: scaffold0426 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 4349 - 4280
Alignment:
Q  54 tgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacata 123  Q
    |||||||||||||||| | ||| | || |||||||||||  ||||||||||| |||||||| ||||||||    
T  4349 tgagtttatctactgataaaaatatttgtgagactgtttgaaaaagtttatggaaacaacttatgacata 4280  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 40944051 - 40943978
Alignment:
Q  49 ttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacat 122  Q
    |||| |||||||||||| ||||||||  |||| ||| |||||||  ||||||||||||||||| || |||||||    
T  40944051 ttatttgagtttatctaatgacataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacat 40943978  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 1160741 - 1160800
Alignment:
Q  118 gacatatctataagttgtttttggctttatttccatatgctctctgtgattgcttatgaaa 178  Q
    ||||| |||||||||||||||  | |||||||||||| |||||| | ||||||||||||||    
T  1160741 gacatgtctataagttgttttcag-tttatttccataagctctccgggattgcttatgaaa 1160800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 6561489 - 6561393
Alignment:
Q  35 ctgtttaacttgatttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataag 131  Q
    |||||| | |||| |||| ||||||||||||| | ||||||  ||| || ||| ||| | || || ||||| |||||||| ||||||||||||||||    
T  6561489 ctgtttgaattgacttatttgagtttatctacgggcataaacgcttctgtgaccgttcaaaagagcttatggaaacaacttatgacatatctataag 6561393  T

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Target: scaffold0141 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 9705 - 9753
Alignment:
Q  44 ttgatttatctgagtttatctactgacataaagacttatgagactgttt 92  Q
    ||||||||| |||||||||||||| ||||||| |||| |||||||||||    
T  9705 ttgatttatttgagtttatctactaacataaatacttgtgagactgttt 9753  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 33645897 - 33646004
Alignment:
Q  54 tgagtttatctactgacataaagacttatgagactgtttacaaa-agtttatgaaaacaactaatgacatatctataagttgtttttggctttatttcca 152  Q
    |||||||||||| |||| |||| |||| |||||||| ||  | | || ||||| |||||||| ||||||| |||||||||||||||| |  |||||||||    
T  33645897 tgagtttatctattgacgtaaaaacttgtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttag-gttatttcca 33645995  T
Q  153 tatgctctc 161  Q
    || ||||||    
T  33645996 taagctctc 33646004  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 23214983 - 23214911
Alignment:
Q  59 ttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataag 131  Q
    |||||||||  |||||| ||||||||||||||||   | | ||||||||||||||| ||||||| || |||||    
T  23214983 ttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataag 23214911  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 10031861 - 10031781
Alignment:
Q  58 tttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    |||||||||||||||||  |||| |||||||||||  || ||  ||||||| ||||| | |||||||| ||||||||||||    
T  10031861 tttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaacttacgacatatccataagttgtttt 10031781  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 20377904 - 20377947
Alignment:
Q  101 ttatgaaaacaactaatgacatatctataagttgtttttggctt 144  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||    
T  20377904 ttatgaaaacaacttatgacatgtctataagttgttttcggctt 20377947  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 27857497 - 27857414
Alignment:
Q  48 tttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataag 131  Q
    ||||| |||||||||||||||||||| | |||| ||| |||||||   | || |||||||||||||| ||||||| || |||||    
T  27857497 tttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataag 27857414  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 7351589 - 7351647
Alignment:
Q  35 ctgtttaacttgatttatctgagtttatctactgacataaagacttatgagactgttta 93  Q
    |||||||| |||| |||| |||||||||||||||||||||  |||| ||||| ||||||    
T  7351589 ctgtttaaattgacttatttgagtttatctactgacataagcacttgtgagattgttta 7351647  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 31839309 - 31839268
Alignment:
Q  98 agtttatgaaaacaactaatgacatatctataagttgttttt 139  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  31839309 agtttatgataacaacttatgacatatctataagtttttttt 31839268  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 6484 - 6554
Alignment:
Q  107 aaacaactaatgacatatctataagttgtttttggctttatttccatatgctctctgtgattgcttatgaaa 178  Q
    |||||||  ||||||| |||||||||||||||  | |||||||||||| |||||| | ||||||||||||||    
T  6484 aaacaacctatgacatgtctataagttgttttcag-tttatttccataagctctccgggattgcttatgaaa 6554  T

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Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 13504 - 13574
Alignment:
Q  107 aaacaactaatgacatatctataagttgtttttggctttatttccatatgctctctgtgattgcttatgaaa 178  Q
    |||||||  ||||||| |||||||||||||||  | |||||||||||| |||||| | ||||||||||||||    
T  13504 aaacaacctatgacatgtctataagttgttttcag-tttatttccataagctctccgggattgcttatgaaa 13574  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 4868542 - 4868449
Alignment:
Q  44 ttgatttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    ||||||||| ||| |||||||| |||||||   |||| |||||||||||   | |||||||| |||||||| ||||||| || ||||||||||||    
T  4868542 ttgatttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatg-aaacaacttatgacatgtcaataagttgtttt 4868449  T

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Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 26410411 - 26410306
Alignment:
Q  56 agtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttttggctttatttccatat 155  Q
    |||||||| ||||||||||  |||| |||||||| ||   | || ||||| ||||| || ||||||| || | ||| ||||||| ||||||||||||||     
T  26410411 agtttatcaactgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagctttatttccataa 26410312  T
Q  156 gctctc 161  Q
    ||||||    
T  26410311 gctctc 26410306  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 27119913 - 27119950
Alignment:
Q  101 ttatgaaaacaactaatgacatatctataagttgtttt 138  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  27119913 ttatgaaaaccactaatgacatgtctataagttgtttt 27119950  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 6950465 - 6950350
Alignment:
Q  44 ttgatttatctgagtttatctactgacataaagacttatgagactgtttacaaaagtttatgaaaacaactaatgacatatctataagttgtttttggct 143  Q
    |||| |||| ||||||||||||||| |||||| | || ||||| |||||   | || ||||| |||||||  ||||||| || ||||||||||||  ||     
T  6950465 ttgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagc- 6950367  T
Q  144 ttatttccatatgctct 160  Q
    ||||||||||| |||||    
T  6950366 ttatttccataagctct 6950350  T

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