View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19828_low_30 (Length: 373)

Name: NF19828_low_30
Description: NF19828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19828_low_30
NF19828_low_30
[»] chr4 (75 HSPs)
chr4 (7-132)||(35124358-35124483)
chr4 (7-136)||(23297409-23297535)
chr4 (7-121)||(38345823-38345936)
chr4 (7-136)||(29877610-29877739)
chr4 (39-136)||(52274106-52274203)
chr4 (39-131)||(28074368-28074459)
chr4 (7-102)||(3564191-3564286)
chr4 (39-136)||(48591410-48591507)
chr4 (11-121)||(948047-948158)
chr4 (21-132)||(41228888-41228999)
chr4 (7-128)||(1374356-1374478)
chr4 (39-132)||(7148775-7148868)
chr4 (59-132)||(17222852-17222925)
chr4 (7-133)||(43699470-43699598)
chr4 (39-134)||(896973-897068)
chr4 (24-136)||(12495630-12495744)
chr4 (39-136)||(23335645-23335742)
chr4 (21-118)||(212952-213048)
chr4 (40-136)||(4603318-4603413)
chr4 (7-136)||(40699327-40699460)
chr4 (13-136)||(19725270-19725393)
chr4 (21-136)||(46704256-46704370)
chr4 (7-137)||(35405656-35405785)
chr4 (7-120)||(42611870-42611983)
chr4 (7-108)||(8130459-8130560)
chr4 (7-136)||(15184518-15184646)
chr4 (40-121)||(27368153-27368234)
chr4 (7-136)||(33533899-33534028)
chr4 (39-136)||(36740907-36741004)
chr4 (40-121)||(39932755-39932836)
chr4 (20-136)||(7206572-7206688)
chr4 (41-136)||(55638067-55638162)
chr4 (86-136)||(22273830-22273880)
chr4 (39-136)||(488370-488467)
chr4 (9-130)||(18424270-18424390)
chr4 (39-132)||(22397295-22397388)
chr4 (69-130)||(28663606-28663667)
chr4 (14-134)||(42617218-42617337)
chr4 (39-134)||(825685-825780)
chr4 (85-136)||(18630881-18630932)
chr4 (41-136)||(46650276-46650371)
chr4 (14-132)||(46175969-46176086)
chr4 (39-132)||(2141644-2141737)
chr4 (39-132)||(15179821-15179913)
chr4 (59-132)||(35010234-35010307)
chr4 (71-136)||(36255022-36255087)
chr4 (39-136)||(47202829-47202925)
chr4 (7-132)||(52700534-52700658)
chr4 (40-132)||(22117358-22117449)
chr4 (7-121)||(32628752-32628863)
chr4 (7-66)||(3564319-3564378)
chr4 (39-134)||(8601204-8601299)
chr4 (59-126)||(21216324-21216391)
chr4 (85-136)||(39931530-39931581)
chr4 (7-132)||(2702705-2702830)
chr4 (39-117)||(3966733-3966810)
chr4 (9-118)||(43415293-43415402)
chr4 (200-241)||(48591407-48591448)
chr4 (7-119)||(2494403-2494515)
chr4 (9-121)||(10794911-10795022)
chr4 (7-55)||(22273764-22273812)
chr4 (49-104)||(4331350-4331405)
chr4 (41-132)||(26206344-26206435)
chr4 (22-77)||(31736431-31736486)
chr4 (7-66)||(34633370-34633429)
chr4 (59-121)||(45018556-45018618)
chr4 (40-117)||(9201655-9201731)
chr4 (200-241)||(15184608-15184649)
chr4 (93-134)||(31022457-31022498)
chr4 (200-241)||(52274103-52274144)
chr4 (61-121)||(2405213-2405272)
chr4 (21-121)||(8057089-8057189)
chr4 (20-64)||(11298697-11298741)
chr4 (7-55)||(30956808-30956856)
chr4 (7-55)||(48591338-48591386)
[»] chr2 (57 HSPs)
chr2 (14-136)||(4026904-4027025)
chr2 (20-136)||(33321298-33321414)
chr2 (7-136)||(38215994-38216119)
chr2 (9-130)||(4090462-4090583)
chr2 (9-136)||(25836698-25836825)
chr2 (14-136)||(29774723-29774845)
chr2 (14-121)||(2790071-2790179)
chr2 (20-136)||(21788441-21788557)
chr2 (21-111)||(34913401-34913491)
chr2 (59-136)||(36501501-36501578)
chr2 (40-136)||(4004823-4004919)
chr2 (20-136)||(755727-755844)
chr2 (9-130)||(13056319-13056440)
chr2 (39-131)||(887415-887507)
chr2 (243-335)||(38638830-38638921)
chr2 (8-107)||(33321418-33321517)
chr2 (14-136)||(38471777-38471899)
chr2 (39-136)||(11776987-11777084)
chr2 (39-136)||(12223855-12223952)
chr2 (12-136)||(5903509-5903633)
chr2 (243-335)||(38634705-38634796)
chr2 (20-130)||(29133659-29133769)
chr2 (20-136)||(5516059-5516176)
chr2 (40-132)||(32366154-32366245)
chr2 (59-131)||(42839312-42839383)
chr2 (41-121)||(43787804-43787884)
chr2 (57-136)||(39592270-39592349)
chr2 (58-120)||(12442835-12442897)
chr2 (41-114)||(30995908-30995984)
chr2 (20-130)||(37409627-37409737)
chr2 (39-132)||(32522036-32522128)
chr2 (7-132)||(7480889-7481017)
chr2 (40-132)||(22898347-22898438)
chr2 (14-114)||(27881005-27881105)
chr2 (7-106)||(2757087-2757184)
chr2 (39-132)||(12238476-12238566)
chr2 (41-136)||(12683592-12683687)
chr2 (7-116)||(13097887-13097998)
chr2 (14-132)||(2401612-2401729)
chr2 (20-78)||(27703502-27703560)
chr2 (46-134)||(8832464-8832555)
chr2 (20-117)||(9140735-9140831)
chr2 (69-130)||(16108114-16108175)
chr2 (23-99)||(8441460-8441536)
chr2 (40-100)||(41554602-41554662)
chr2 (100-136)||(42382684-42382720)
chr2 (7-66)||(755625-755684)
chr2 (7-66)||(8832570-8832629)
chr2 (7-66)||(33321226-33321285)
chr2 (200-241)||(755724-755765)
chr2 (200-241)||(4026987-4027028)
chr2 (200-241)||(12683589-12683630)
chr2 (85-134)||(17546473-17546522)
chr2 (200-245)||(36501494-36501539)
chr2 (7-55)||(4533446-4533494)
chr2 (7-99)||(37419987-37420078)
chr2 (7-55)||(38010584-38010632)
[»] chr7 (61 HSPs)
chr7 (7-136)||(38372529-38372658)
chr7 (39-132)||(29378648-29378741)
chr7 (7-119)||(30181521-30181633)
chr7 (7-136)||(34922902-34923033)
chr7 (21-121)||(44613474-44613574)
chr7 (9-135)||(19308478-19308604)
chr7 (7-132)||(22575557-22575682)
chr7 (7-131)||(29390542-29390665)
chr7 (7-142)||(22319271-22319406)
chr7 (39-126)||(47511046-47511133)
chr7 (40-136)||(41677378-41677475)
chr7 (7-99)||(40629440-40629531)
chr7 (14-132)||(16958794-16958911)
chr7 (44-136)||(14691285-14691378)
chr7 (7-136)||(37779268-37779392)
chr7 (40-131)||(14675951-14676041)
chr7 (14-132)||(16932920-16933037)
chr7 (14-132)||(16938303-16938420)
chr7 (14-136)||(22032740-22032862)
chr7 (20-134)||(23119908-23120022)
chr7 (30-135)||(14593142-14593250)
chr7 (41-132)||(41094223-41094312)
chr7 (69-136)||(17944686-17944753)
chr7 (82-136)||(6406858-6406912)
chr7 (41-126)||(20888578-20888664)
chr7 (86-136)||(46744003-46744053)
chr7 (14-136)||(47654400-47654522)
chr7 (7-104)||(7098118-7098215)
chr7 (40-136)||(23356477-23356573)
chr7 (82-134)||(16012744-16012796)
chr7 (40-132)||(19913949-19914041)
chr7 (59-118)||(14536905-14536964)
chr7 (243-318)||(40766697-40766772)
chr7 (14-128)||(28004562-28004675)
chr7 (40-118)||(43391725-43391803)
chr7 (7-124)||(18837193-18837315)
chr7 (69-130)||(39279462-39279523)
chr7 (85-134)||(48949769-48949818)
chr7 (40-136)||(991504-991599)
chr7 (72-136)||(12473389-12473453)
chr7 (40-136)||(23137149-23137244)
chr7 (7-55)||(26331782-26331830)
chr7 (40-135)||(35246676-35246768)
chr7 (7-127)||(35809061-35809181)
chr7 (69-136)||(7774733-7774799)
chr7 (13-80)||(21249133-21249200)
chr7 (7-66)||(29390465-29390524)
chr7 (46-129)||(31613658-31613741)
chr7 (91-121)||(14730019-14730049)
chr7 (59-121)||(21027514-21027576)
chr7 (20-134)||(48021636-48021749)
chr7 (15-136)||(48895276-48895401)
chr7 (88-136)||(18765098-18765147)
chr7 (200-241)||(29378707-29378748)
chr7 (43-136)||(32917578-32917671)
chr7 (200-241)||(46744015-46744056)
chr7 (20-80)||(12473190-12473250)
chr7 (7-55)||(29378769-29378817)
chr7 (7-55)||(35331113-35331161)
chr7 (200-244)||(37779262-37779306)
chr7 (39-103)||(41037756-41037819)
[»] chr3 (54 HSPs)
chr3 (8-136)||(40581062-40581191)
chr3 (7-136)||(53218026-53218155)
chr3 (9-130)||(22809185-22809307)
chr3 (7-129)||(10272093-10272213)
chr3 (39-136)||(52021249-52021347)
chr3 (7-136)||(29270332-29270461)
chr3 (7-136)||(34707699-34707828)
chr3 (39-128)||(43079928-43080017)
chr3 (20-118)||(51409377-51409475)
chr3 (39-136)||(40240563-40240660)
chr3 (42-136)||(48597853-48597947)
chr3 (7-132)||(584991-585116)
chr3 (7-136)||(29614165-29614293)
chr3 (39-136)||(52421127-52421224)
chr3 (29-136)||(28741200-28741307)
chr3 (7-121)||(2086692-2086806)
chr3 (43-136)||(42956165-42956258)
chr3 (8-120)||(3845827-3845939)
chr3 (69-136)||(23816157-23816224)
chr3 (14-136)||(3645281-3645402)
chr3 (14-115)||(10448752-10448853)
chr3 (7-108)||(21296737-21296838)
chr3 (39-127)||(45331290-45331378)
chr3 (40-136)||(4257286-4257383)
chr3 (7-118)||(7292652-7292762)
chr3 (44-134)||(10521162-10521252)
chr3 (40-134)||(10667402-10667496)
chr3 (40-121)||(24842108-24842189)
chr3 (39-120)||(3870228-3870309)
chr3 (42-114)||(30473151-30473223)
chr3 (40-136)||(32901134-32901230)
chr3 (69-121)||(43069079-43069131)
chr3 (21-115)||(3876270-3876364)
chr3 (14-136)||(20894481-20894602)
chr3 (83-133)||(50021958-50022007)
chr3 (83-136)||(7300410-7300463)
chr3 (200-241)||(43079917-43079958)
chr3 (47-136)||(43971833-43971922)
chr3 (7-66)||(242021-242081)
chr3 (88-136)||(20685837-20685885)
chr3 (41-101)||(36266249-36266309)
chr3 (89-132)||(20174930-20174973)
chr3 (200-239)||(29270423-29270462)
chr3 (7-126)||(30383739-30383858)
chr3 (85-136)||(37778182-37778233)
chr3 (20-118)||(11528875-11528973)
chr3 (74-132)||(19307979-19308037)
chr3 (85-136)||(29830625-29830680)
chr3 (20-136)||(33946536-33946644)
chr3 (200-241)||(29830622-29830663)
chr3 (7-80)||(30499937-30500010)
chr3 (7-64)||(40240492-40240548)
chr3 (200-241)||(52021309-52021350)
chr3 (7-55)||(20685909-20685957)
[»] chr8 (58 HSPs)
chr8 (7-136)||(32131411-32131540)
chr8 (15-134)||(16972344-16972464)
chr8 (41-136)||(10298912-10299007)
chr8 (39-114)||(35453413-35453488)
chr8 (39-136)||(32975690-32975787)
chr8 (39-136)||(34286550-34286646)
chr8 (24-136)||(19327855-19327966)
chr8 (39-117)||(28879061-28879139)
chr8 (58-128)||(35168435-35168505)
chr8 (25-136)||(19925546-19925657)
chr8 (20-126)||(16706096-16706202)
chr8 (14-136)||(42363303-42363424)
chr8 (7-136)||(42102078-42102206)
chr8 (41-136)||(11988202-11988296)
chr8 (14-136)||(13131408-13131539)
chr8 (41-132)||(24350509-24350600)
chr8 (39-134)||(38895662-38895757)
chr8 (42-136)||(12607086-12607179)
chr8 (39-121)||(35285931-35286013)
chr8 (39-120)||(2669651-2669732)
chr8 (39-132)||(9131118-9131211)
chr8 (41-134)||(14709525-14709617)
chr8 (22-132)||(8216893-8217005)
chr8 (7-143)||(19925368-19925503)
chr8 (41-136)||(8752811-8752906)
chr8 (13-132)||(43577198-43577317)
chr8 (20-118)||(32924216-32924314)
chr8 (39-136)||(28280712-28280809)
chr8 (7-132)||(30973960-30974085)
chr8 (62-130)||(24866943-24867011)
chr8 (82-134)||(25333720-25333771)
chr8 (85-132)||(37410903-37410950)
chr8 (39-101)||(32213043-32213105)
chr8 (14-136)||(38338837-38338958)
chr8 (39-136)||(41145382-41145481)
chr8 (7-64)||(16972270-16972327)
chr8 (41-121)||(2563363-2563443)
chr8 (40-132)||(14262330-14262422)
chr8 (7-131)||(14942395-14942519)
chr8 (41-132)||(32751143-32751234)
chr8 (41-132)||(218244-218333)
chr8 (41-132)||(694804-694893)
chr8 (41-132)||(699013-699102)
chr8 (41-132)||(731867-731956)
chr8 (41-132)||(855763-855852)
chr8 (7-66)||(28879168-28879227)
chr8 (85-132)||(36907634-36907681)
chr8 (41-99)||(13265489-13265547)
chr8 (20-66)||(16706027-16706073)
chr8 (200-241)||(10298909-10298950)
chr8 (200-241)||(16972339-16972380)
chr8 (200-241)||(24866934-24866975)
chr8 (7-55)||(2019716-2019764)
chr8 (24-80)||(7638511-7638567)
chr8 (39-103)||(29243083-29243146)
chr8 (201-241)||(34286547-34286587)
chr8 (85-136)||(35055468-35055522)
chr8 (40-136)||(38195491-38195586)
[»] chr5 (78 HSPs)
chr5 (39-136)||(28625483-28625580)
chr5 (7-136)||(42851993-42852121)
chr5 (40-136)||(13060588-13060684)
chr5 (41-129)||(41534628-41534716)
chr5 (7-121)||(14243794-14243909)
chr5 (15-136)||(12467243-12467365)
chr5 (14-136)||(22201918-22202044)
chr5 (15-136)||(29922175-29922296)
chr5 (69-136)||(41419534-41419601)
chr5 (20-121)||(1473340-1473441)
chr5 (7-136)||(1576602-1576730)
chr5 (7-136)||(1608085-1608213)
chr5 (43-136)||(1868853-1868946)
chr5 (11-136)||(24030190-24030314)
chr5 (40-136)||(12987000-12987096)
chr5 (40-136)||(17657246-17657342)
chr5 (20-134)||(2878665-2878778)
chr5 (39-134)||(42706799-42706896)
chr5 (20-101)||(2670059-2670140)
chr5 (7-116)||(3520509-3520617)
chr5 (7-132)||(15413963-15414088)
chr5 (8-101)||(17128250-17128343)
chr5 (39-136)||(41059775-41059872)
chr5 (58-129)||(31637087-31637158)
chr5 (7-137)||(1371979-1372108)
chr5 (59-136)||(5559905-5559985)
chr5 (39-136)||(35536845-35536945)
chr5 (39-136)||(40452463-40452561)
chr5 (14-136)||(43318981-43319103)
chr5 (21-106)||(10537235-10537320)
chr5 (7-136)||(26002968-26003097)
chr5 (39-136)||(28357355-28357452)
chr5 (39-134)||(13625508-13625604)
chr5 (14-121)||(341968-342075)
chr5 (42-136)||(11912088-11912182)
chr5 (40-141)||(15122549-15122649)
chr5 (44-112)||(3977483-3977551)
chr5 (20-136)||(7364295-7364411)
chr5 (39-99)||(43268644-43268704)
chr5 (7-101)||(11163290-11163384)
chr5 (23-121)||(40415973-40416071)
chr5 (47-136)||(6144749-6144838)
chr5 (7-136)||(11991276-11991404)
chr5 (47-136)||(38461268-38461357)
chr5 (25-121)||(11706919-11707015)
chr5 (82-130)||(28357187-28357235)
chr5 (7-103)||(42558740-42558834)
chr5 (39-121)||(40697004-40697091)
chr5 (8-118)||(27981916-27982026)
chr5 (38-136)||(29418738-29418836)
chr5 (200-241)||(17657304-17657345)
chr5 (41-102)||(30852176-30852237)
chr5 (14-119)||(33757066-33757170)
chr5 (200-241)||(35536907-35536948)
chr5 (200-241)||(41419563-41419604)
chr5 (40-136)||(7984109-7984205)
chr5 (200-240)||(28625542-28625582)
chr5 (41-132)||(780558-780648)
chr5 (23-130)||(6025977-6026083)
chr5 (40-143)||(6125291-6125393)
chr5 (41-136)||(16722032-16722126)
chr5 (14-129)||(20458551-20458665)
chr5 (13-96)||(6150358-6150437)
chr5 (39-136)||(29659065-29659160)
chr5 (7-80)||(35536945-35537016)
chr5 (7-65)||(41125675-41125733)
chr5 (200-241)||(13060585-13060626)
chr5 (20-101)||(22573637-22573718)
chr5 (59-136)||(23087765-23087842)
chr5 (41-99)||(33803814-33803874)
chr5 (40-121)||(39990580-39990661)
chr5 (7-80)||(40452391-40452463)
chr5 (7-66)||(1576743-1576803)
chr5 (7-66)||(1608012-1608072)
chr5 (39-99)||(1943013-1943073)
chr5 (195-239)||(5559904-5559948)
chr5 (82-134)||(27805961-27806013)
chr5 (40-96)||(43010639-43010695)
[»] chr1 (84 HSPs)
chr1 (7-136)||(4068086-4068215)
chr1 (7-136)||(35590101-35590230)
chr1 (7-134)||(26946092-26946220)
chr1 (41-136)||(15515333-15515428)
chr1 (39-136)||(6337742-6337839)
chr1 (39-136)||(36422967-36423064)
chr1 (7-132)||(37712039-37712163)
chr1 (7-136)||(28689973-28690104)
chr1 (41-136)||(37329398-37329493)
chr1 (39-136)||(48819302-48819399)
chr1 (8-136)||(26435161-26435288)
chr1 (45-136)||(16888952-16889042)
chr1 (7-129)||(18327495-18327617)
chr1 (46-132)||(26988158-26988244)
chr1 (14-136)||(49971229-49971351)
chr1 (39-136)||(3069840-3069937)
chr1 (59-136)||(41196696-41196773)
chr1 (21-136)||(13038932-13039047)
chr1 (14-136)||(32497258-32497379)
chr1 (21-136)||(9572770-9572886)
chr1 (7-129)||(1321513-1321635)
chr1 (23-130)||(51162256-51162363)
chr1 (39-132)||(45267468-45267562)
chr1 (39-136)||(1005343-1005440)
chr1 (7-136)||(16225480-16225607)
chr1 (39-136)||(17628411-17628507)
chr1 (13-132)||(17814168-17814286)
chr1 (40-134)||(26542977-26543071)
chr1 (23-136)||(15631891-15632004)
chr1 (20-121)||(20169248-20169349)
chr1 (41-130)||(50919493-50919581)
chr1 (14-130)||(5243396-5243511)
chr1 (40-136)||(13412439-13412534)
chr1 (64-120)||(23544819-23544875)
chr1 (9-100)||(1265715-1265806)
chr1 (20-103)||(10850090-10850173)
chr1 (21-136)||(46689536-46689651)
chr1 (40-130)||(5347159-5347248)
chr1 (20-118)||(46473078-46473176)
chr1 (39-132)||(3116052-3116144)
chr1 (40-120)||(10082254-10082335)
chr1 (7-136)||(15791355-15791483)
chr1 (39-136)||(22593393-22593490)
chr1 (39-132)||(31378741-31378834)
chr1 (7-103)||(37148112-37148208)
chr1 (7-103)||(37156937-37157033)
chr1 (25-136)||(41003376-41003487)
chr1 (41-132)||(10365176-10365266)
chr1 (69-136)||(18317034-18317101)
chr1 (7-66)||(37712180-37712239)
chr1 (69-128)||(39658317-39658376)
chr1 (42-113)||(39941516-39941587)
chr1 (7-135)||(1565368-1565495)
chr1 (42-104)||(39941447-39941509)
chr1 (24-134)||(42591370-42591480)
chr1 (39-132)||(22103114-22103205)
chr1 (21-134)||(25485733-25485846)
chr1 (39-132)||(28122619-28122712)
chr1 (41-130)||(36259283-36259372)
chr1 (88-136)||(14461027-14461075)
chr1 (30-118)||(35282598-35282686)
chr1 (76-131)||(1683892-1683947)
chr1 (7-66)||(26435089-26435148)
chr1 (7-66)||(28690117-28690176)
chr1 (63-130)||(34265596-34265663)
chr1 (7-66)||(35897533-35897592)
chr1 (7-66)||(47413485-47413544)
chr1 (7-92)||(391139-391225)
chr1 (7-65)||(6900625-6900683)
chr1 (47-134)||(19284907-19284996)
chr1 (63-129)||(29333444-29333510)
chr1 (59-133)||(41130017-41130091)
chr1 (41-134)||(46500988-46501082)
chr1 (200-241)||(4068177-4068218)
chr1 (200-241)||(15515330-15515371)
chr1 (39-132)||(16708802-16708895)
chr1 (74-132)||(23369332-23369392)
chr1 (200-241)||(35590192-35590233)
chr1 (200-241)||(37329395-37329436)
chr1 (200-241)||(45267528-45267569)
chr1 (7-99)||(35897646-35897738)
chr1 (88-136)||(38781130-38781178)
chr1 (7-55)||(41196624-41196672)
chr1 (39-99)||(51409730-51409790)
[»] scaffold0024 (1 HSPs)
scaffold0024 (14-136)||(97195-97314)
[»] chr6 (48 HSPs)
chr6 (21-136)||(2255719-2255834)
chr6 (7-143)||(25430745-25430878)
chr6 (39-132)||(2027166-2027259)
chr6 (39-128)||(2034223-2034312)
chr6 (21-136)||(6758612-6758727)
chr6 (39-136)||(6776811-6776908)
chr6 (39-136)||(7267778-7267875)
chr6 (39-135)||(21025214-21025310)
chr6 (39-134)||(8014791-8014886)
chr6 (42-121)||(24625857-24625936)
chr6 (21-136)||(29623463-29623578)
chr6 (7-129)||(21891331-21891453)
chr6 (20-102)||(30533964-30534046)
chr6 (7-132)||(17914917-17915041)
chr6 (39-136)||(29052336-29052433)
chr6 (14-136)||(3210982-3211109)
chr6 (20-134)||(10873970-10874082)
chr6 (40-136)||(1240596-1240693)
chr6 (8-136)||(10687279-10687410)
chr6 (40-136)||(32675875-32675971)
chr6 (39-136)||(34801036-34801132)
chr6 (39-103)||(10054384-10054448)
chr6 (88-136)||(32165247-32165295)
chr6 (9-123)||(10619202-10619314)
chr6 (39-114)||(10755288-10755363)
chr6 (41-136)||(16589756-16589851)
chr6 (41-136)||(16605529-16605624)
chr6 (40-135)||(21871271-21871365)
chr6 (20-118)||(3829923-3830021)
chr6 (14-115)||(6632637-6632738)
chr6 (14-103)||(9894744-9894833)
chr6 (23-132)||(21610039-21610148)
chr6 (39-136)||(32615401-32615497)
chr6 (14-132)||(4808550-4808667)
chr6 (61-136)||(6958649-6958724)
chr6 (14-132)||(10184320-10184437)
chr6 (69-126)||(13429488-13429545)
chr6 (20-136)||(23239231-23239347)
chr6 (58-118)||(34509934-34509994)
chr6 (83-134)||(9202387-9202438)
chr6 (47-134)||(34413331-34413417)
chr6 (14-132)||(1468154-1468270)
chr6 (21-99)||(2040209-2040287)
chr6 (40-98)||(12817116-12817174)
chr6 (41-130)||(4272387-4272476)
chr6 (200-241)||(16589813-16589854)
chr6 (200-241)||(16605526-16605567)
chr6 (26-78)||(6752809-6752861)
[»] scaffold0157 (1 HSPs)
scaffold0157 (24-136)||(24733-24847)
[»] scaffold0370 (1 HSPs)
scaffold0370 (245-335)||(13779-13868)
[»] scaffold0048 (1 HSPs)
scaffold0048 (20-134)||(58856-58970)
[»] scaffold0057 (2 HSPs)
scaffold0057 (14-132)||(24379-24496)
scaffold0057 (20-103)||(43835-43918)
[»] scaffold0332 (1 HSPs)
scaffold0332 (39-136)||(14732-14829)
[»] scaffold1367 (1 HSPs)
scaffold1367 (40-136)||(1062-1158)
[»] scaffold0012 (1 HSPs)
scaffold0012 (7-132)||(178471-178597)
[»] scaffold0004 (2 HSPs)
scaffold0004 (39-132)||(227709-227803)
scaffold0004 (41-136)||(242626-242720)
[»] scaffold0041 (1 HSPs)
scaffold0041 (41-132)||(108984-109073)
[»] scaffold0006 (1 HSPs)
scaffold0006 (40-136)||(278978-279073)
[»] scaffold1088 (1 HSPs)
scaffold1088 (9-132)||(1267-1390)
[»] scaffold0299 (1 HSPs)
scaffold0299 (40-136)||(11286-11382)
[»] scaffold0512 (1 HSPs)
scaffold0512 (47-133)||(4076-4161)
[»] scaffold0015 (1 HSPs)
scaffold0015 (8-66)||(48543-48601)


Alignment Details
Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 35124358 - 35124483
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||  ||||||||||||| |||  ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  35124358 ggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacag 35124457  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||||| ||||||    
T  35124458 cttatgaagatacaaattttgttagt 35124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 23297409 - 23297535
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||||| ||||||||||||||||   ||||||    
T  23297409 ggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatg---aaacag 23297505  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||| ||| ||||| ||||    
T  23297506 cttatgaagatacaatttttgttagcgaga 23297535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 38345936 - 38345823
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||  |||||| ||||||||||  |||||||||| |||||||||||| ||||| ||||||||||||||||||     
T  38345936 ggattgacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataagtt-gtcaaagtagtttatgaaaaaacaa 38345838  T
Q  107 cttatgaagatacaa 121  Q
    |||||||||||||||    
T  38345837 cttatgaagatacaa 38345823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 29877610 - 29877739
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| |||||||||||||||||    |||||||||||||||  |||||||||| |||||||||| | |  |||||||||||||||||| |||    
T  29877610 ggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcag 29877709  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||| ||| ||||||||||    
T  29877710 cttatgaagatacaatttttgttagtgaga 29877739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 52274203 - 52274106
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||| ||||||||||| |||| ||||| |  ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  52274203 gcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgaga 52274106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 28074368 - 28074459
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 131  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttag 28074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 3564191 - 3564286
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 102  Q
    |||||||||| | |||||||||||||||||  ||||||| ||||||||| |||||||| || |||||||||||| |||||||||||||||||||||    
T  3564191 ggattgacttgtttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaaaa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 48591507 - 48591410
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||   |||||| || |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  48591507 gcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgaga 48591410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 948047 - 948158
Alignment:
Q  11 tgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagctt 109  Q
    |||||||  ||| |||||||||||||  ||||||| |||||||||  |||||||||| ||||||||| || |||||||||||||||| ||||||||||||    
T  948047 tgacttactttttagcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagctt 948146  T
Q  110 atgaagatacaa 121  Q
    || |||||||||    
T  948147 ataaagatacaa 948158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 41228888 - 41228999
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||  |||||||||  ||||||| ||||||| || |||||||||| | || ||||||||||||||||||||| || |||||||||||    
T  41228888 ttgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagataca 41228987  T
Q  121 aatttcgttagt 132  Q
    | |||| |||||    
T  41228988 attttcattagt 41228999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 1374478 - 1374356
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-ca 105  Q
    |||||| ||||| ||||||||||||||||||  |||||||||||||| |   ||||||| |  ||||||||| | |||| ||||||||||||||||| ||    
T  1374478 ggattggcttatttttgagcttatgcaaaaaaacttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaacca 1374379  T
Q  106 gcttatgaagatacaaatttcgt 128  Q
    |||||||||||||||| ||||||    
T  1374378 gcttatgaagatacaattttcgt 1374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 7148775 - 7148868
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||| |||||||||||||||| || |||||| |||| |||||    
T  7148775 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagt 7148868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 17222852 - 17222925
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagt 17222925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 43699598 - 43699470
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| |||||||||||| ||||   ||||| ||||||||||  |||||||||  |||||||||| | ||||| |||||||||||||||||||    
T  43699598 ggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaacag 43699499  T
Q  107 --cttatgaagatacaaatttcgttagtg 133  Q
      ||||||||||||||| |||| ||||||    
T  43699498 ctcttatgaagatacaattttcattagtg 43699470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 896973 - 897068
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||||||| ||||||||||| |||||||||| | ||||| ||||||||||||||||||  ||| | |||||| | ||||||||||||    
T  896973 gcttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtga 897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 12495744 - 12495630
Alignment:
Q  24 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaa--ggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||| ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||  |||||||||||||||||||||| || |||||||||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 12495645  T
Q  122 atttcgttagtgaga 136  Q
      ||| |||||||||    
T  12495644 tattcattagtgaga 12495630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 23335645 - 23335742
Alignment:
Q  39 gcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    ||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  23335645 gcttatgcaaataaatgaga-ttttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataagtgaga 23335742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 213048 - 212952
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    ||||||||||||||||   |||||||||||||||| | |||||| || |||||||||| | || ||||||||||||||||||||| ||||||||||||    
T  213048 ttgagcttatgcaaaacaacttatgcaaataaata-agttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagata 212952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 4603413 - 4603318
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||   ||||||||| |||| |||| ||  | |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  4603413 cttatgcaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 4603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 40699327 - 40699460
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| |||||  ||||||||||||||||  ||||||||||||||||| | ||||||||| |   |||||| | ||||||||||||||||||||||||     
T  40699327 ggattggcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagtttatgaaaaaacaa 40699426  T
Q  107 ----cttatgaagatacaaatttcgttagtgaga 136  Q
        ||||||||||||||  |||||| |||||||    
T  40699427 acatcttatgaagatacagttttcgtaagtgaga 40699460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 19725270 - 19725393
Alignment:
Q  13 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 112  Q
    |||||| || |||||||| |||||  |||||||||| ||||||   ||||||||| |||| ||||||| || |||||| |||||||||||||||  ||||    
T  19725270 acttattttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatg 19725369  T
Q  113 aagatacaaatttcgttagtgaga 136  Q
    |||||| || |||| |||||||||    
T  19725370 aagatataattttcattagtgaga 19725393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 46704370 - 46704256
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||| ||||   |||||||||||||  || ||||||| || ||||||| || | || |||||||||||||||||||||||||||||||||| |    
T  46704370 ttgagcttatgtaaaacaacttatgcaaataataag-cttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaa 46704272  T
Q  121 aatttcgttagtgaga 136  Q
    | |||| |||||||||    
T  46704271 attttcattagtgaga 46704256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 35405656 - 35405785
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||   ||||| ||||||| || |  |||||||| ||| | |||  | ||||||  |||||||||||||||||    
T  35405656 ggattgacttatttttgagcttatgcaaaacaacttatacaaataacta-agatttatgtattatacttaatcttgtcaagacagtttatgaaaaaacag 35405754  T
Q  107 cttatgaagatacaaatttcgttagtgagac 137  Q
    |||||||||||| || |||||||||| ||||    
T  35405755 cttatgaagatagaattttcgttagtaagac 35405785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 42611983 - 42611870
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttt-tatgtactattcataagttggtcaaggtagtttatgaaaaaaca 105  Q
    |||||| ||||| ||| |||||||||||||   ||||||||||||||||  |||| |||||| |||||||||| | ||| || |||||||||||||||||    
T  42611983 ggattggcttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaaca 42611885  T
Q  106 gcttatgaagataca 120  Q
     ||||||||||||||    
T  42611884 acttatgaagataca 42611870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 8130459 - 8130560
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| ||| ||| |||||||||  |||||||||||||||||  |||||||| | |||||||||||| |||| ||||| ||||||| ||||||    
T  8130459 ggattggcttattttttagcatatgcaaaacagcttatgcaaataaataagcttttatgcattattcataagtttgtcagggtagcttatgaacaaacag 8130558  T
Q  107 ct 108  Q
    ||    
T  8130559 ct 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 15184518 - 15184646
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | ||| ||||||||||||||||||    
T  15184518 ggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacag 15184616  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
     |||||||||||||| ||||||||||||||    
T  15184617 tttatgaagatacaattttcgttagtgaga 15184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 27368234 - 27368153
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||||||||||||  ||||||| || |||||||||||| ||||| |||| |||||||||||||| |||| |||||||||    
T  27368234 cttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaa 27368153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 33533899 - 33534028
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||  |||||| |||| |||||   |||||||||||  |||  |||  | ||| |||||||||||| |||||||||||||||||||||||||    
T  33533899 ggattgacttaattttgagtttatacaaaacaacttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagtttatgaaaaaacag 33533998  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    |  | ||| |||||| ||||||||||||||    
T  33533999 cccacgaatatacaattttcgttagtgaga 33534028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 36740907 - 36741004
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  ||||||| || ||| |||||| | ||||| |||||||||||||| |||| | |||||||||||| |||| |||||||||    
T  36740907 gcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgaga 36741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 39932836 - 39932755
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||||||||||||| ||||||||||| |||| ||||| | || |||||||| ||||||||||||  ||||||||||||||    
T  39932836 cttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaa 39932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 7206688 - 7206572
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||||| ||  |||||||||||| ||||  ||||||| || ||||||  ||   || ||||||||||||||||||||| ||||||||||||     
T  7206688 tttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataa 7206589  T
Q  120 aaatttcgttagtgaga 136  Q
    |  ||||||||||||||    
T  7206588 agttttcgttagtgaga 7206572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 55638162 - 55638067
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||| |  |||||||||| |||||||||||| || ||  |||||||||||||||||| |||| |||||||||  | |||||||||||    
T  55638162 ttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgttagtgaga 55638067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 22273830 - 22273880
Alignment:
Q  86 aggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 22273880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 488467 - 488370
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||| ||  |||||||||| |||| ||||| | ||||||||||||||||||||||  |||| | ||||||||| |||  |||||||||    
T  488467 gcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgaga 488370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 18424390 - 18424270
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||||| ||| |||||||||||||||||    |||| ||||||||||  |||||||||| |||||||||  | || |||||||||||||| ||||||  |    
T  18424390 attgacatatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga-aaaacaatt 18424292  T
Q  109 tatgaagatacaaatttcgtta 130  Q
    ||||||||||||| ||| ||||    
T  18424291 tatgaagatacaatttttgtta 18424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 22397388 - 22397295
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||| |||||||||| |  || ||||| |||| ||||||  || ||||||||||||||||||||| |||||||| |||||| ||||||||||    
T  22397388 gcttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgttagt 22397295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 28663606 - 28663667
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||||||||| | ||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgtta 28663667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 42617337 - 42617218
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || |||||||| |||||  |||||||||||||||||   ||||| ||| |||| |||||||  | ||||||||||||||||||| || ||||||    
T  42617337 cttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttttt-aaggtagtttatgaaaaaatagtttatga 42617239  T
Q  114 agatacaaatttcgttagtga 134  Q
    |||||  | ||||||||||||    
T  42617238 agatatgattttcgttagtga 42617218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 825685 - 825780
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||||||||||||  ||||| | || ||||||||||   ||| || |||||||||||||||||||| |||||||||||  ||| ||||||||    
T  825685 gcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagatacattttttgttagtga 825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 18630932 - 18630881
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  18630932 aaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgaga 18630881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 46650276 - 46650371
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||  |||| ||||| ||||||||| || || |  |||||||||||||||| || |||| |||| |||| ||||||||||||||    
T  46650276 ttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtgaga 46650371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 46176086 - 46175969
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | ||||||||||||||||||| || ||||||    
T  46176086 cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagtttatgaaaaaatagtttatga 46175988  T
Q  114 agatacaaatttcgttagt 132  Q
    |||||||| ||||| ||||    
T  46175987 agatacaattttcgctagt 46175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 2141644 - 2141737
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  |||||||||  |||| |||| || || ||||||  |||| ||||||||| |||||||||||||| |||| |||||    
T  2141644 gcttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaagatacaattttcattagt 2141737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 15179821 - 15179913
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||| | ||||||||| |||| |||||||  | ||||||||||||||| |||  | ||||||| |||||| ||||||||||    
T  15179821 gcttatgcaaataaatatatttttatgtattatttataagtt-tttaaggtagtttatgaagaaatggattatgaaaatacaattttcgttagt 15179913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 35010234 - 35010307
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||| |||| ||||||| ||||| ||||||||||| |||| || |||| ||||||||| ||||||||||    
T  35010234 ttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgttagt 35010307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 36255087 - 36255022
Alignment:
Q  71 ttcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||| | ||||| ||||||| |||||||||||||||||||||||||| |||  |||||||||    
T  36255087 ttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgaga 36255022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 47202829 - 47202925
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||   ||||||||| || | |||| ||  | ||||||||||||||||||||   |||||||||||||| ||||||||||||||    
T  47202829 gcttatgcaaataaataagtttttatgtattacttataaattttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgaga 47202925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 52700658 - 52700534
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| || ||||||||||||| |  |||||| |||||||||    |||||||| |||| ||||| | || || || ||||||||||||| ||    
T  52700658 ggattgacttattttagagcttatgcaaacaa-cttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatag 52700560  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
     |||||||||||| | ||||||||||    
T  52700559 tttatgaagatacgattttcgttagt 52700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 22117358 - 22117449
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||||  | ||||||| || ||| ||||||||||    
T  22117358 cttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttatgaaaaaatgggttatgaaaatgcaattttcgttagt 22117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 32628752 - 32628863
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| |||||||||||||||||  |||| || |||   |||  ||||| |||  |||||||||| | ||| ||||| |||||||||||||||    
T  32628752 ggattgtcttatttttgagcttatgcaaaacagcttttgaaaa---ataagcttttttgtgttattcataagcttgtcgaggtaatttatgaaaaaacag 32628848  T
Q  107 cttatgaagatacaa 121  Q
    ||| |||||||||||    
T  32628849 cttgtgaagatacaa 32628863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 3564378 - 3564319
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  3564378 ggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgt 3564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 8601204 - 8601299
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||||||   ||||| | || |||| |||||   ||||| ||||||||||||||||| | |||||||||||||| ||| ||||||||    
T  8601204 gcttatgcaaataaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgttagtga 8601299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 21216391 - 21216324
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 126  Q
    ||||||||| |||||||||| | |||||||||||||||||||||  || |||||||| ||||| ||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaattttc 21216324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 39931581 - 39931530
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||||||   |||||||||||||| ||||||||||||||    
T  39931581 aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgaga 39931530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 2702830 - 2702705
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttta-tgtactattcataagttggtcaaggtagtttatgaaaaaaca 105  Q
    |||||| ||||| || |||||||||||||   ||||||||| ||||||| | | ||| |||| |||| ||||||| || ||||||||| ||||||| |||    
T  2702830 ggattggcttattttagagcttatgcaaagcagcttatgcacataaata-agtattagtgtattatttataagtttgttaaggtagttaatgaaaagaca 2702732  T
Q  106 gcttatgaagatacaaatttcgttagt 132  Q
     |||||||| |||||| |||| |||||    
T  2702731 acttatgaatatacaattttcattagt 2702705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 3966733 - 3966810
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 117  Q
    ||||||||||||||||| | ||||||||| | ||||||||||  ||||| || |||||| |||||||| ||||||||||    
T  3966733 gcttatgcaaataaataaatttttatgtattgttcataagtt-ttcaagctattttatggaaaaacaggttatgaagat 3966810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 43415402 - 43415293
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||||||||| |||||||||| | ||||   ||| ||||||||||||   ||||||||| |||||||||| | || || |||||||| |||||||||  |    
T  43415402 attgacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatt 43415303  T
Q  109 tatgaagata 118  Q
    ||| ||||||    
T  43415302 tatcaagata 43415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 48591448 - 48591407
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  48591448 aaaaaacagcttatgaagatacaattttcgttaatgagaact 48591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 2494515 - 2494403
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| || || |||||||||||  | ||||| ||||| |||  ||||||  || |||| ||||| | || ||||||||||||||||||| ||    
T  2494515 ggattgccttatattagatcttatgcaaaatagtttatgtaaatagataagcttttacatattatttataagcttgtaaaggtagtttatgaaaaaatag 2494416  T
Q  107 cttatgaagatac 119  Q
     ||||||||||||    
T  2494415 tttatgaagatac 2494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 10795022 - 10794911
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||||||||| || ||||||||||||||  |||| || |||||||||   ||||||||| |||| | ||| | || ||||| |||||||| |||| || |    
T  10795022 attgacttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatttaaaagctcgttaaggtggtttatga-aaaatagtt 10794924  T
Q  109 tatgaagatacaa 121  Q
    |||||||||||||    
T  10794923 tatgaagatacaa 10794911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 22273764 - 22273812
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| |||||||||||||| ||  |||||||||||||||||    
T  22273764 ggattgacttatttttgagcttatgcataatagcttatgcaaataaata 22273812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 4331350 - 4331405
Alignment:
Q  49 ataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 104  Q
    |||||||  ||||||| || ||||||||| || |||||||||||||||||||||||    
T  4331350 ataaataagcttttatttattattcataactttgtcaaggtagtttatgaaaaaac 4331405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 26206435 - 26206344
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||    |||||||| |||| ||||| | || || ||||||||||||||||||| |||||||  ||| | ||||||||||    
T  26206435 ttatgcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgttagt 26206344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 31736486 - 31736431
Alignment:
Q  22 tgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataa 77  Q
    |||||||||||||||   |||||| ||||||||| | |||||||||||||||||||    
T  31736486 tgagcttatgcaaaacaacttatgtaaataaataaaattttatgtactattcataa 31736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 34633370 - 34633429
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||| ||||| ||| |||||||||||||   |||||||||||||||| ||||||||||    
T  34633370 ggattggcttattttttagcttatgcaaaacaacttatgcaaataaataaacttttatgt 34633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 45018556 - 45018618
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||| || ||||||| || | || || |||||||||||||||||| |||||||||||||||    
T  45018556 ttttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaa 45018618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 9201655 - 9201731
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 117  Q
    ||||||||||||||||   ||||||||| |||| |||||||  ||||| || |||||| |||||||| ||||||||||    
T  9201655 cttatgcaaataaataagtttttatgtattatttataagtt-ttcaagctattttatggaaaaacaggttatgaagat 9201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 15184608 - 15184649
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    ||||||||| |||||||||||| |||||||||| ||||||||    
T  15184608 aaaaaacagtttatgaagatacaattttcgttagtgagaact 15184649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 31022457 - 31022498
Alignment:
Q  93 ttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||||||||| ||||||||| |||||| |||||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtcagtga 31022498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 52274144 - 52274103
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||| | ||||||||    
T  52274144 aaaaaacagcttatgaagatacaattttcgtcagtgagaact 52274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 2405213 - 2405272
Alignment:
Q  61 ttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||| |||| ||||| | ||||| |||||||||||||||| |||||||| ||||||||    
T  2405213 ttatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaa 2405272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 8057189 - 8057089
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||| ||||   || ||||||| |||||   |||||| || |||||||||| | |||||||||| ||| ||||||||   |||||||||||||    
T  8057189 ttgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagataca 8057090  T
Q  121 a 121  Q
    |    
T  8057089 a 8057089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11298741 - 11298697
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 64  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||    
T  11298741 tttgagcttatgaaaaatagcttatgcaaataaataaacttttat 11298697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 30956856 - 30956808
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| ||| |||||||| ||||  |||||||||||||||||    
T  30956856 ggattgacttattttttagcttatgaaaaatagcttatgcaaataaata 30956808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 48591338 - 48591386
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||| ||||| |||||||||||| ||||  |||||||||||||||||    
T  48591338 ggattggcttatttttgagcttatgaaaaatagcttatgcaaataaata 48591386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 4026904 - 4027025
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| ||||||||||||||||| ||||||||||||||||||  |||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||    
T  4026904 cttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatga 4027002  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    |||||||| ||| ||||||||||    
T  4027003 agatacaatttttgttagtgaga 4027025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 33321414 - 33321298
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||||||||   ||| ||||||||||||  |||||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  33321414 tttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatac 33321315  T
Q  120 aaatttcgttagtgaga 136  Q
    || ||| ||||||||||    
T  33321314 aatttttgttagtgaga 33321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 38215994 - 38216119
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||     ||||||| |||||||||| | |||||||||||||| ||||||| ||    
T  38215994 ggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttaggaaaaaatag 38216089  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    | ||||||||||||| ||||||||||||||    
T  38216090 catatgaagatacaattttcgttagtgaga 38216119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 4090462 - 4090583
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||| ||||| |||||||||||||||||  ||||||||||||||||| ||||| ||||| |||||||||  | |||||||||||  ||||||||||||||    
T  4090462 attggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagct 4090561  T
Q  109 tatgaagatacaaatttcgtta 130  Q
    || |||||||||| ||||||||    
T  4090562 tacgaagatacaattttcgtta 4090583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 25836825 - 25836698
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||| ||||| ||||||| |  ||||||  |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||||||| |||    
T  25836825 attgccttatttttgagcctgcgcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggct 25836726  T
Q  109 tatgaagatacaaatttcgttagtgaga 136  Q
    |||||||| |||| | ||||||||||||    
T  25836725 tatgaagacacaattatcgttagtgaga 25836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 29774723 - 29774845
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| ||| |||||||||| ||   |||||||||||||||| ||||||||| | ||||||| |||| || |||||||||||||||||||| ||||||||    
T  29774723 cttattttttagcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatga 29774822  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    | |||||| ||||||||||||||    
T  29774823 aaatacaattttcgttagtgaga 29774845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 2790179 - 2790071
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 112  Q
    ||||| |||||||||||||||||  ||||||||||||||||| | |||||||| | |||| ||||| | ||||||||| |||||||| ||||||||||||    
T  2790179 cttatttttgagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatg 2790080  T
Q  113 aagatacaa 121  Q
    |||||||||    
T  2790079 aagatacaa 2790071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 21788441 - 21788557
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||| ||||||||||   ||||||||||||||||  ||||||| || |||||||||| | || ||| ||||||||||||||||| ||||||||||||     
T  21788441 tttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataa 21788540  T
Q  120 aaatttcgttagtgaga 136  Q
    || ||||||||||||||    
T  21788541 aattttcgttagtgaga 21788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 34913491 - 34913401
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttat 111  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||||| || ||| ||||||||||||||||| |||||    
T  34913491 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaacttat 34913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 36501578 - 36501501
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgaga 36501501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 4004823 - 4004919
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  ||||||||||||||||||||| |  | || |||||||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  4004823 cttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgaga 4004919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 755844 - 755727
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa-aaaacagcttatgaagata 118  Q
    |||||||||||||||||   |||| |||||||| ||  |||||||||| |||||| ||| | || | ||||||||||||| |||||||||||||||||||    
T  755844 tttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaagata 755745  T
Q  119 caaatttcgttagtgaga 136  Q
    ||| ||| ||||||||||    
T  755744 caatttttgttagtgaga 755727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 13056440 - 13056319
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||| ||||| ||| |||| ||||||||  | ||||||||||| |||  |||||||||| | |||||||| | ||||||||||||||| |||||| ||||    
T  13056440 attggcttattttttagctcatgcaaaacggattatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagct 13056341  T
Q  109 tatgaagatacaaatttcgtta 130  Q
    ||||||||| ||| ||||||||    
T  13056340 tatgaagatgcaattttcgtta 13056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 887415 - 887507
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 131  Q
    |||||||||||||||||  ||||| |||| |||||||||| | |||||||||||||||| |||| | |||||||||||||||| |||| ||||    
T  887415 gcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttcattag 887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 38638830 - 38638921
Alignment:
Q  243 atgttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgacaaactaagtggagatgg 335  Q
    |||||| ||||||| ||||||| |||||||  ||||||||||||| |||||||||| || |||||||||||||||  ||||||||||||||||    
T  38638830 atgttaaaatggaataataataaggctttcagagaagattatgagaagaaggttctacaatcattagagagacga-gaactaagtggagatgg 38638921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 33321517 - 33321418
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagc 107  Q
    ||||||||||| ||| |||||||||||||   ||||||||||||| ||   ||||||||| || ||||||| | ||||||||||||||||||||||||||    
T  33321517 gattgacttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttatgaaaaaacagc 33321418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 38471899 - 38471777
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||||||||  |||||||||||||||||  |||||||||  |||  ||||| |  |  | ||||||||||||||||||| ||||||    
T  38471899 cttattttcgagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatga 38471800  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    || ||||| ||||||||||||||    
T  38471799 aggtacaattttcgttagtgaga 38471777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 11776987 - 11777084
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| |||||||  |||||||||| |||| ||||| | || ||| ||||||||||||| ||||||||||||||||||  ||| ||||||||||    
T  11776987 gcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgaga 11777084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 12223855 - 12223952
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||| ||||||||| ||  |||| ||||| ||||||||||   ||||||||||||||||||||||||| |||||||||||| | |||| |||||||||    
T  12223855 gcttttgcaaataagtaacctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattttcattagtgaga 12223952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 5903509 - 5903633
Alignment:
Q  12 gacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttat 111  Q
    ||||||| |||||||| ||||||||   |||||||||||||| |  | ||  |||| || ||||||| | ||||| |||||| ||||||||||| |||||    
T  5903509 gacttatttttgagctaatgcaaaacaacttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaaaaacatcttat 5903608  T
Q  112 gaagatacaaatttcgttagtgaga 136  Q
    |||||||||| ||| ||||||||||    
T  5903609 gaagatacaatttttgttagtgaga 5903633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 38634705 - 38634796
Alignment:
Q  243 atgttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgacaaactaagtggagatgg 335  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||| | ||||||| ||| |||||||||||||| | |||||||| |||||||    
T  38634705 atgttagaatggaacaacaataagactttccgagaagattatgagaaaaaggttcggcaatcattagagagacggc-aactaagtagagatgg 38634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 29133769 - 29133659
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||  ||||  | |||||||||||||||  |||||||||| |||||||||||| ||||  || |||| || |||||||| |||| |||||||    
T  29133769 tttgagcttatataaaatagtttatgcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatac 29133670  T
Q  120 aaatttcgtta 130  Q
    || ||||||||    
T  29133669 aattttcgtta 29133659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 5516059 - 5516176
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagata 118  Q
    ||||||||| |||||||  ||||||| ||| |||||  ||| |||||  |||||||||||| || || |||||||||| ||||||||| |||| || |||    
T  5516059 tttgagcttttgcaaaacagcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaata 5516158  T
Q  119 caaatttcgttagtgaga 136  Q
    ||| ||||||||||||||    
T  5516159 caattttcgttagtgaga 5516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 32366154 - 32366245
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||||| ||||||| |||| | ||||||||||    
T  32366154 cttatgcaaataaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaaacagtttatgaatatacgattttcgttagt 32366245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 42839383 - 42839312
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 131  Q
    ||||||||| |||||||||||| |||||| ||||||||| |||| |||||||||||||| ||| |||||||||    
T  42839383 ttttatgtattattcataagtttgtcaagttagtttatg-aaaaccagcttatgaagatgcaattttcgttag 42839312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 43787884 - 43787804
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||| |||||||||| ||||||||||| |||||||||  | ||  |||||| ||||||||||||| |||||||||||||||    
T  43787884 ttatacaaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaa 43787804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 39592270 - 39592349
Alignment:
Q  57 acttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| | |||||||||| | |||||||||||||||||||| | |||||| ||||||| || |||| |||||||||    
T  39592270 acttttatgcattattcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattttctttagtgaga 39592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 12442835 - 12442897
Alignment:
Q  58 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    |||||| ||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||    
T  12442835 cttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 30995984 - 30995908
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaa 114  Q
    |||| |||||||||| ||||||||||| ||||   ||||||||| ||||| ||||||||||||||| ||||||||||    
T  30995984 ttatacaaataaataaacttttatgtattattattcataagttgatcaagatagtttatgaaaaaatagcttatgaa 30995908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 37409627 - 37409737
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||| |||||||||   ||||||||||||||||  |||||| ||| |||||   |||| ||||| ||||||||||||||||||  ||||||| ||||    
T  37409627 tttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaatac 37409726  T
Q  120 aaatttcgtta 130  Q
    || ||| ||||    
T  37409727 aatttttgtta 37409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 32522128 - 32522036
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  32522128 gcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagt 32522036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 7481017 - 7480889
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact----attcataagttggtcaaggtagtttatgaaaaa 102  Q
    |||| ||||||| ||||| |||||||||||   ||||||||||||||||   |||||| || |    ||||||||||| || |||||||||||| |||||    
T  7481017 ggatcgacttatttttgaacttatgcaaaacaacttatgcaaataaataatattttatatattattcattcataagtttgtgaaggtagtttat-aaaaa 7480919  T
Q  103 acagcttatgaagatacaaatttcgttagt 132  Q
    ||| |||| |||||||||| |||| |||||    
T  7480918 acaacttaggaagatacaattttcattagt 7480889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 22898438 - 22898347
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||| | ||||||||| |||| |||| ||  | |||||||||||||||||||  | ||||||| |||||| ||||||||||    
T  22898438 cttatgcaaataaatacatttttatgtattatttataaattttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgttagt 22898347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 27881105 - 27881005
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||||||||  |||||||||||||||||   | ||||||| |||| |||||||  | ||||||| |||||||||||||  ||||||    
T  27881105 cttattttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatga 27881006  T
Q  114 a 114  Q
    |    
T  27881005 a 27881005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 2757184 - 2757087
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | || |||||||||||||||||||    
T  2757184 ggattgacttattttagagcttatataaaacagcttatgcaaataaata-agttttatgtattatttataagtt-tttaaagtagtttatgaaaaaacag 2757087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 12238566 - 12238476
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  | || ||||| |||| ||||| | || |||||||||||||||||||   |||||||| |||||| ||||||||||    
T  12238566 gcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaa---cttatgaacatacaattttcgttagt 12238476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 12683687 - 12683592
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||   ||| ||||| |||||||||| | ||||  | | |||| ||||||||||||||||||||||||| ||| |||| |||||    
T  12683687 ttatgcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattttggttactgaga 12683592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 13097887 - 13097998
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtactatt-cataagttggtcaaggtagtttatgaaaaaac 104  Q
    |||||| ||||| |||||||||||||||||  ||||||| ||| ||| | | |||| ||||| |||| |||||| | ||||| || ||||||||||||||    
T  13097887 ggattggcttatttttgagcttatgcaaaacagcttatggaaaaaaaaaaagctttgatgtattatttcataagcttgtcaaagttgtttatgaaaaaac 13097986  T
Q  105 agcttatgaaga 116  Q
    | ||||||||||    
T  13097987 aacttatgaaga 13097998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 2401729 - 2401612
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| | || |||||||  | |||||||||||||||||||  | ||||||    
T  2401729 cttattttagagcttatataaaacagcttatgcaaataaatatatttttatgtattgtttataagttttt-aaggtagtttatgaaaaaatgggttatga 2401631  T
Q  114 agatacaaatttcgttagt 132  Q
    | |||||| ||| ||||||    
T  2401630 aaatacaatttttgttagt 2401612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 27703560 - 27703502
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 78  Q
    |||||||||||||||||  |||||||||||||||||  ||||||| || ||||||||||    
T  27703560 tttgagcttatgcaaaacagcttatgcaaataaataagcttttatatattattcataag 27703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 8832464 - 8832555
Alignment:
Q  46 caaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||  |||||||||| ||||   |||||| |  ||||||||||||||||||| |||| |||  ||||||||| ||||||||||||    
T  8832464 caaataaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaacacaggttagaaagatacaattttcgttagtga 8832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 9140831 - 9140735
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 117  Q
    ||||||||||| |||||   | ||||||||||||||  |||||||||| || ||||||  | ||||| |||||||||| |||||||| ||||||||||    
T  9140831 tttgagcttatacaaaacatcgtatgcaaataaataaccttttatgtatta-tcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 16108175 - 16108114
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||| ||||||| || ||||||||||||||||||||| |||||||| |||||| ||| ||||    
T  16108175 tatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 16108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 8441460 - 8441536
Alignment:
Q  23 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||||||||||   |||||||||||||||||   ||||||||| |||| ||||||| || || ||||||||||||    
T  8441460 gagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 41554662 - 41554602
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 100  Q
    ||||| |||||||||| ||||||||||| ||||||||| || || || |||||||||||||    
T  41554662 cttatacaaataaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 42382684 - 42382720
Alignment:
Q  100 aaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||| ||||||||||||||||||    
T  42382684 aaaacagcttatgaagatgcaaatttcgttagtgaga 42382720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 755625 - 755684
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||| |||||||||||||||||||| ||||  ||||||||||||||| |  |||||||||    
T  755625 ggatcgacttatctttgagcttatgaaaaatagcttatgcaaataaagaagcttttatgt 755684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 8832629 - 8832570
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  8832629 ggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 8832570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 33321226 - 33321285
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||| ||||| |||||||||||| ||||  ||||||||||||||||| || |||||||    
T  33321226 ggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataaacctttatgt 33321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 755765 - 755724
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  755765 aaaaaacagcttatgaagatacaatttttgttagtgagaact 755724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 4026987 - 4027028
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  4026987 aaaaaacagcttatgaagatacaatttttgttagtgagaact 4027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 12683630 - 12683589
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  12683630 aaaaaacagcttatgaagatacaattttggttactgagaact 12683589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 17546473 - 17546522
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||||||||||| |||||||| |||  | ||||||||||||    
T  17546473 aaggtagtttatgaaaaaacaacttatgaatatatcattttcgttagtga 17546522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 36501539 - 36501494
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaactcatg 245  Q
    |||||||||||||||||||||  |||| ||||| ||||||||||||    
T  36501539 aaaaaacagcttatgaagataaaatttgcgttagtgagaactcatg 36501494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 4533494 - 4533446
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    ||||| |||||| |||||||||||| ||||  |||||||||||||||||    
T  4533494 ggattaacttatttttgagcttatgaaaaatagcttatgcaaataaata 4533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 37420078 - 37419987
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||| ||||| ||| |||||||| ||||    |||||||||||||||  |||||||||   |||||||| || ||||||||||||||||||    
T  37420078 ggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgtta-attcataattttgtcaaggtagtttatgaa 37419987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 38010584 - 38010632
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||| |||||||||||||||||| ||||  |||||| ||||||||||    
T  38010584 ggattgtcttatctttgagcttatgaaaaatagcttatacaaataaata 38010632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 7e-34; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 38372529 - 38372658
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||  || ||||||| |||||||||||| |||||||||||||| |||||| |||    
T  38372529 ggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcag 38372628  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    || | ||||| |||| ||||||||||||||    
T  38372629 ctcaagaagaaacaattttcgttagtgaga 38372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 29378648 - 29378741
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  |||||||||| |||| || |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29378648 gcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagt 29378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 30181521 - 30181633
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||||||||||||||| |   |||| ||||||||| |  |||||||||| |||||||||| | ||||||||||||||| |||||||||    
T  30181521 ggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacag 30181620  T
Q  107 cttatgaagatac 119  Q
    |||||||||||||    
T  30181621 cttatgaagatac 30181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 34922902 - 34923033
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat--gaaaaaac 104  Q
    |||||| ||||| ||| |||| | ||||||   ||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||   |||||||    
T  34922902 ggattggcttatttttcagctaacgcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaac 34923001  T
Q  105 agcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| ||||||||||  ||||||||||||||    
T  34923002 agcttgtgaagatacacttttcgttagtgaga 34923033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 44613574 - 44613474
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||  |||||||||||||||||  ||||||| || |||||||||| | || ||||||||||||||||||||| ||||||| ||||||    
T  44613574 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgataca 44613475  T
Q  121 a 121  Q
    |    
T  44613474 a 44613474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 19308604 - 19308478
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||||| ||| |||||||| |||| ||| |||||||| ||||||||| | ||| ||||| |||||||||||| || | ||||||||||||||||  ||||    
T  19308604 attgacatatttttgagctaatgcgaaactgcttatgaaaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaattagct 19308505  T
Q  109 tatgaagatacaaatttcgttagtgag 135  Q
    ||||||||| ||| ||| |||||||||    
T  19308504 tatgaagatccaatttttgttagtgag 19308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 22575557 - 22575682
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || ||||||||| ||||   ||||||||||||||||   ||||||||| |||| ||||||| || ||| || |||||||||||||||    
T  22575557 ggattaacttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacag 22575656  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
     |||||||||||||| ||||||||||    
T  22575657 tttatgaagatacaattttcgttagt 22575682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 29390665 - 29390542
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| |||||| ||||| ||||   ||||||||||||||||  |||| ||||| |||||||||| | || |||||||||||||| ||||||     
T  29390665 ggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatga-aaaacaa 29390567  T
Q  107 cttatgaagatacaaatttcgttag 131  Q
    ||||||||||||||| |||||||||    
T  29390566 cttatgaagatacaattttcgttag 29390542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 22319406 - 22319271
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| || ||| ||||||||| | | ||||||||||||||| || || ||||| |||||||||||| || ||  |||||||||||| ||||     
T  22319406 ggattggcttattttagagtttatgcaaagaggtttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttatgaaacaacaa 22319307  T
Q  107 cttatgaagatacaaatttcgttagtgagacattat 142  Q
    |||||||| |||||| |||||||||| ||| |||||    
T  22319306 cttatgaatatacaattttcgttagtaagatattat 22319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 47511046 - 47511133
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 126  Q
    |||||||||||||||||  |||||||||| |||||||||| | || |||| ||| |||||||||||||||||||||||||||| ||||    
T  47511046 gcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttc 47511133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 41677378 - 41677475
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||| ||||||||| |||||| ||| |||||||||||||| ||| ||| ||||||    
T  41677378 cttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtttgtgaga 41677475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 40629531 - 40629440
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||| ||||| |||||||||||||||||  |||||| |||||||||| || |||||||| |||||||||| | ||||||||||||||||||    
T  40629531 ggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaac-tttatgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 16958794 - 16958911
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | |||||||||||||||||||| | ||||||    
T  16958794 cttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatga 16958892  T
Q  114 agatacaaatttcgttagt 132  Q
    |||||||| ||||||||||    
T  16958893 agatacaattttcgttagt 16958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 14691378 - 14691285
Alignment:
Q  44 tgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||| | |||||||||| |||||||||| | ||||| ||| ||||||||||||||  ||||||||||| || ||||||||||||||    
T  14691378 tgcaaataaataaagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgaga 14691285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 37779392 - 37779268
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa--c 104  Q
    |||||| ||||| ||| ||||||| |||||  |||||||||||||||||  |||||||      |||||||| | ||||||||||||||||||||||  |    
T  37779392 ggattggcttattttt-agcttatacaaaacagcttatgcaaataaataagcttttat------ttcataagcttgtcaaggtagtttatgaaaaaaaac 37779300  T
Q  105 agcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| |||||| ||||||||||||||    
T  37779299 agcttatgaaaatacaactttcgttagtgaga 37779268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 14676041 - 14675951
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 131  Q
    |||||||||||||||||   |||||||| |||| |||||||  | |||||||||||||||||||||| |||||||||||||| |||| ||||    
T  14676041 cttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcattag 14675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 16933037 - 16932920
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   ||||||    
T  16933037 cttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatga 16932939  T
Q  114 agatacaaatttcgttagt 132  Q
    |||||||| ||||||||||    
T  16932938 agatacaattttcgttagt 16932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 16938420 - 16938303
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   ||||||    
T  16938420 cttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatga 16938322  T
Q  114 agatacaaatttcgttagt 132  Q
    |||||||| ||||||||||    
T  16938321 agatacaattttcgttagt 16938303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 22032740 - 22032862
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||| ||||   ||||||||||||||||   ||||||||| |||| |||||   || || ||||||||||||||||||  ||||||    
T  22032740 cttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatga 22032839  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    || ||||| ||||||||||||||    
T  22032840 aggtacaattttcgttagtgaga 22032862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 23120022 - 23119908
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||||||||   | ||||||||||||||  |||| | ||| |||||||||||| ||||| |||||||| |||| ||||| || |||||||||    
T  23120022 tttgagcttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatac 23119923  T
Q  120 aaatttcgttagtga 134  Q
    || ||| ||| ||||    
T  23119922 aatttttgttcgtga 23119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 14593142 - 14593250
Alignment:
Q  30 tgcaaaaatgcttatgcaaataaatagacttttatgtactattcata--agttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaaatttc 126  Q
    |||||||  ||||||||||||||||| |  |||||||| ||||||||  || | ||||| |||||||||||||||| | |||| ||||||||||| ||||    
T  14593142 tgcaaaatagcttatgcaaataaataaaagtttatgtattattcatataagcttgtcaaagtagtttatgaaaaaaactgcttgtgaagatacaattttc 14593241  T
Q  127 gttagtgag 135  Q
    |||||||||    
T  14593242 gttagtgag 14593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 41094223 - 41094312
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||  | |||||||| || ||||||| | |||||||| ||||||||||||  | ||||||||||||||| ||||||||||    
T  41094223 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgttagt 41094312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 17944686 - 17944753
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| | |||||||||||||||  ||||||| |||||||||||||||||| | |||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaaattacattagtgaga 17944753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 6406912 - 6406858
Alignment:
Q  82 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| || |||||    
T  6406912 gtcaaggtagtttatgaaaaaacagcttatgaagatgcaattttcgctaatgaga 6406858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 20888578 - 20888664
Alignment:
Q  41 ttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 126  Q
    |||||||||||||||  ||||| ||||| |||||||||| | |  |||||||||||||||||||||  |||||||||||||| ||||    
T  20888578 ttatgcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttc 20888664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 46744003 - 46744053
Alignment:
Q  86 aggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  46744003 aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgaga 46744053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 47654522 - 47654400
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || |||||| |||||||  ||||||| |||||||||  |  | ||||| |||  ||||| | || || ||||||||||||||||||| ||||||    
T  47654522 cttattttagagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatga 47654423  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    || ||||| ||||||||||||||    
T  47654422 aggtacaattttcgttagtgaga 47654400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 7098215 - 7098118
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 104  Q
    |||||||||| | || |||||| |||||||  | |||| ||||||||||   ||||||| | |||||||||||| |||||| ||||||||||||||||    
T  7098215 ggattgacttgttttcgagcttgtgcaaaatagtttatacaaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaaaaac 7098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 23356573 - 23356477
Alignment:
Q  40 cttatgcaaataaata-gacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| ||||||||| | ||||| |||| |||||| ||||| ||||||||| ||||||||||||||| ||||||| |||| | ||| ||||||||||    
T  23356573 cttatgaaaataaataaggctttt-tgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgaga 23356477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 16012744 - 16012796
Alignment:
Q  82 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  16012744 gtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgttagtga 16012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 19913949 - 19914041
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||| ||||||||| | |||||||| ||||| |||| || || || ||||||||||||||||| | ||||||||| | || ||||||||||    
T  19913949 cttatgtaaataaataaatttttatgtgctatttataaatttgttaatgtagtttatgaaaaaacggtttatgaagagataattttcgttagt 19914041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    ||||||||| |||||||||| | |||||| |||||||||||||||||  |||||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 40766772 - 40766697
Alignment:
Q  243 atgttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgac 318  Q
    |||||||||||||||||||||| ||||||   | ||||||||||| |||| ||| |||||||||  ||||||||||    
T  40766772 atgttagaatggaacaataataaggctttttgaaaagattatgagaagaatgttgtgcattcatccgagagacgac 40766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 28004562 - 28004675
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | ||| ||||||||||||||||   ||||||    
T  28004562 cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttttttaag-tagtttatgaaaaaaccatttatga 28004660  T
Q  114 agatacaaatttcgt 128  Q
    |||||||||||||||    
T  28004661 agatacaaatttcgt 28004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 43391725 - 43391803
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||| ||||||||| |||| | | || |||||||||||| || ||||||||||||||||||| |  |||||||||||    
T  43391725 cttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagata 43391803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 18837193 - 18837315
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt--tatgaaaaaac 104  Q
    |||||| ||||| |||||||||||||||||  || ||||||||||||||  ||| | |||| |||||||||| | || |||||| ||  ||  |||||||    
T  18837193 ggattggcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataagcttgtaaaggtacttaataaaaaaaaac 18837292  T
Q  105 agcttat---gaagatacaaatt 124  Q
    |||||||   |||||||||||||    
T  18837293 agcttatcaagaagatacaaatt 18837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 39279462 - 39279523
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||||||||| | || ||||| |||||||||||| ||||||| |||||||||| ||||||||    
T  39279462 tattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgtta 39279523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 48949769 - 48949818
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  48949769 aaggtagtttatgaaaaaacagtttatgaagatataatattcgttagtga 48949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 991504 - 991599
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||| |||||||   ||||||| | |||| |||||||  | ||||||||||||||||||||   |||||||||||||  ||||||||||||||    
T  991504 cttatgcacataaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacacttttcgttagtgaga 991599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 12473389 - 12473453
Alignment:
Q  72 tcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| || || ||||||||||||||||||| |||| |||| |||| ||||||| ||||||    
T  12473389 tcataagtttgtaaatgtagtttatgaaaaaacagtttataaagaaacaattttcgtttgtgaga 12473453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 23137244 - 23137149
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| |||| ||||| | ||||||||| |||| |||||||  | ||||||||||||| |||||  | |||||||||||||| |||| |||||||||    
T  23137244 cttatacaaacaaataaatttttatgtattatttataagttttt-aaggtagtttatgtaaaaatcgtttatgaagatacaattttcattagtgaga 23137149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 26331782 - 26331830
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||||    
T  26331782 ggattgacttatgtttgagcttatgcaaaatagcttatgtaaataaata 26331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 35246676 - 35246768
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 135  Q
    ||||||||||||||||   ||||||||| |||| | |||||  | ||||||||||||||||||||   |||||| ||||||| |||||||||||||    
T  35246676 cttatgcaaataaataagtttttatgtattatttaaaagttttt-aaggtagtttatgaaaaaac--tttatgaggatacaattttcgttagtgag 35246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 35809061 - 35809181
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| || |||||||| ||||    ||||||||||||||||  | || ||||| |||| ||||| | || || ||||||||||||||||||     
T  35809061 ggattggcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaa 35809160  T
Q  107 cttatgaagatacaaatttcg 127  Q
    |||| ||| |||||| |||||    
T  35809161 cttaagaatatacaattttcg 35809181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 7774799 - 7774733
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||| ||||||| ||||| ||| ||||||||||||||  |||||||||||||| ||||||| ||||||    
T  7774799 tatttataagtttgtcaacgtactttatgaaaaaacat-ttatgaagatacaattttcgttggtgaga 7774733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 21249133 - 21249200
Alignment:
Q  13 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 80  Q
    |||||| |||| | |||||||||| | ||||||||||||||||   ||||||||| ||||||||||||    
T  21249133 acttatttttgcgtttatgcaaaactacttatgcaaataaataagtttttatgtattattcataagtt 21249200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29390465 - 29390524
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| |||||||||||| ||||  | |||||||||||||||  |||||||||    
T  29390465 ggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 29390524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 31613741 - 31613658
Alignment:
Q  46 caaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 129  Q
    |||||||||| | || |||||| ||||||| || | ||||| |||||||||||||||||| | |||||||| || | |||||||    
T  31613741 caaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaaaacaacctatgaagaaaccattttcgtt 31613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 14730019 - 14730049
Alignment:
Q  91 gtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||||||||||||||||||||||||||||    
T  14730019 gtttatgaaaaaacagcttatgaagatacaa 14730049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 21027576 - 21027514
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||||| |||| |||||||  | ||||| |||||||||||||||| || |||||||||||    
T  21027576 ttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaa 21027514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 48021749 - 48021636
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||||||| |||||    |||||||||||||||  || |||| || |||||||||| | || || ||||||||||| |||| | || ||||||||||    
T  48021749 tttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatac 48021651  T
Q  120 aaatttcgttagtga 134  Q
    || |||| |||||||    
T  48021650 aattttcattagtga 48021636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 48895276 - 48895401
Alignment:
Q  15 ttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga-----aaaaacagctt 109  Q
    |||| |||||||||||||||||  | || ||||||||||||  | || || || |||||||||| |  ||||||||||||||||     |||||||| ||    
T  48895276 ttatttttgagcttatgcaaaaccgttt-tgcaaataaataagcattcatatattattcataagcttatcaaggtagtttatgagacaaaaaaacagttt 48895374  T
Q  110 atgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||| ||| | ||||||||    
T  48895375 atgaagatacaatttttgatagtgaga 48895401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 18765147 - 18765098
Alignment:
Q  88 gtagtttatgaaaaaac-agcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  18765147 gtagtttatgaaaaaactaacttatgaagatacaatttttgttagtgaga 18765098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 29378707 - 29378748
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||| | ||||||    
T  29378707 aaaaaacagcttatgaagatacaattttcgttagtaagaact 29378748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 32917671 - 32917578
Alignment:
Q  43 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||   |||||||||  ||||||||| |  |||  || ||||| ||||||||| |||||||||||| || ||| ||||||||||    
T  32917671 atgcaaataaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgttagtgaga 32917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 46744015 - 46744056
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||| ||||||||||| |||||||||| ||||||||    
T  46744015 aaaaaacagcatatgaagatacaattttcgttagtgagaact 46744056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 12473190 - 12473250
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 80  Q
    |||||||||||||||||   |||||||||| |||||   ||||||||| ||||||||||||    
T  12473190 tttgagcttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataagtt 12473250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 29378817 - 29378769
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| |||||| ||||| ||||  |||||||||||||||||    
T  29378817 ggattgacttatttttgagtttatgaaaaatagcttatgcaaataaata 29378769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 35331113 - 35331161
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| ||  |||||||||||||  |||||||||||||||||    
T  35331113 ggattgacttattttgtagcttatgcaaaacagcttatgcaaataaata 35331161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 37779306 - 37779262
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaactcat 244  Q
    ||||||||||||||||| |||| | |||||||| |||||||||||    
T  37779306 aaaaaacagcttatgaaaatacaactttcgttagtgagaactcat 37779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 41037756 - 41037819
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||||||||  |||||||||| |||||| ||| | ||||||||| ||||||| ||||    
T  41037756 gcttatgcaaataaataagcttttatgtattattca-aagcttgtcaaggtaatttatgataaaa 41037819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 40581191 - 40581062
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa-aaaacag 106  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||||| |||| ||||| | |||||||||||||||||| |||||||    
T  40581191 gattgacttatctttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacag 40581092  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    | |||||||| |||| ||||||||||||||    
T  40581091 cgtatgaagaaacaattttcgttagtgaga 40581062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 53218155 - 53218026
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||| |||||||||||||   ||||||| ||||||||   ||||||||| |||||||||| | ||||||||||||||||||||||||     
T  53218155 ggattgacttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaa 53218056  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||| ||||||||||| ||||||||||||||    
T  53218055 cttttgaagatacaattttcgttagtgaga 53218026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 22809307 - 22809185
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagc 107  Q
    |||||||||| |||||| ||||||||||  |||||||||||||||||  ||||| || || |||||||||| | ||||||||||||||||||||||| ||    
T  22809307 attgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgc 22809208  T
Q  108 ttatgaagatacaaatttcgtta 130  Q
    |||||||||||||| ||||||||    
T  22809207 ttatgaagatacaattttcgtta 22809185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 10272093 - 10272213
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||| |||||||||||||   || ||||||||||||| ||||||||||| |||||||||| |  |||||| ||||| |||||||||||    
T  10272093 ggattgacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaaaacag 10272190  T
Q  107 cttatgaagatacaaatttcgtt 129  Q
    ||||||| |||||||||||||||    
T  10272191 cttatgaggatacaaatttcgtt 10272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 52021249 - 52021347
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  52021249 gcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgaga 52021347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 29270332 - 29270461
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||   |||||   ||||||||  |||||||||| |||||||||| |  ||||| || |||||||||||||||    
T  29270332 ggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacag 29270431  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||| |||||||| |||||    
T  29270432 cttatgaagatacaattttcgttaatgaga 29270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 34707828 - 34707699
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||   |||| | ||||| |||  |||||||||| |||||||||| | || ||||||||||||||||||||||    
T  34707828 ggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacag 34707729  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    || | |||||||||| ||||||||| ||||    
T  34707728 ctaacgaagatacaattttcgttagcgaga 34707699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 43080017 - 43079928
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 128  Q
    |||||||||||||||||  |||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  43080017 gcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgt 43079928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 51409377 - 51409475
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||||||||| ||||  |||||||||||||||||  ||||||| || ||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  51409377 tttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagata 51409475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 40240660 - 40240563
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||| |  |||||||||| ||||||||||   ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  40240660 gcttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgaga 40240563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 48597947 - 48597853
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| ||| ||||||||  | |||||||||||| ||| ||||||| |||||||||||| ||||||||||||||| |||||| |||||||    
T  48597947 tatgcaaatacataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgaga 48597853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 584991 - 585116
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||| |||||||| ||||    |||||||||||||||  |||||||| | |||||| ||| |  |  ||||||||||||||||||||     
T  584991 ggattgacttatttttcagcttatgtaaaacacattatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaa 585090  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||| ||||||||||    
T  585091 cttatgaagatacaattttcgttagt 585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 29614165 - 29614293
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | ||||||||||||||||||||||    
T  29614165 ggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacag 29614263  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
     |||||||||||||| ||||||||||||||    
T  29614264 tttatgaagatacaattttcgttagtgaga 29614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 52421224 - 52421127
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| |||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| || | |||||||||||| ||| ||||| ||||    
T  52421224 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttagcgaga 52421127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 28741307 - 28741200
Alignment:
Q  29 atgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 128  Q
    ||||||||  |||||||||||||||||  | |||||||| || | ||||| | || || ||||||||||||||||||| |||||||| ||||| ||||||    
T  28741307 atgcaaaacagcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgt 28741208  T
Q  129 tagtgaga 136  Q
    ||||||||    
T  28741207 tagtgaga 28741200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 2086806 - 2086692
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| || |||||||||| |||  ||||||| ||||||||| ||||||||||| |||| ||||  | || ||||| ||||||||||||| ||    
T  2086806 ggattggcttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatag 2086707  T
Q  107 cttatgaagatacaa 121  Q
     ||||||||||||||    
T  2086706 tttatgaagatacaa 2086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 42956258 - 42956165
Alignment:
Q  43 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||   ||||||||| |||||||||  | ||| | ||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  42956258 atgcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgaga 42956165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 3845827 - 3845939
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagc 107  Q
    ||||| ||||| ||||||||||||||| |  | |||  ||||||||||  ||||||| || |||||||||| | |||||| |||||||||| ||||||||    
T  3845827 gattggcttatatttgagcttatgcaacacagattacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatgacaaaacagc 3845926  T
Q  108 ttatgaagataca 120  Q
     ||||||||||||    
T  3845927 atatgaagataca 3845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 23816224 - 23816157
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||| || |||||||    
T  23816224 tattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaactttggtcagtgaga 23816157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 3645281 - 3645402
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||||||||||||||| | ||||    
T  3645281 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatga 3645379  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    |||||||| ||||||||||||||    
T  3645380 agatacaattttcgttagtgaga 3645402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 10448752 - 10448853
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||||||||   ||||||||||||||||  | |||||||| |||| ||||| | || || ||||||||||||||||||| ||||||    
T  10448752 cttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatga 10448851  T
Q  114 ag 115  Q
    ||    
T  10448852 ag 10448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 21296737 - 21296838
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||| ||||||||||    |||||||||||||||   |||||| || |||||||| |||  ||||||||||||||||||||| ||    
T  21296737 ggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaaatag 21296836  T
Q  107 ct 108  Q
    ||    
T  21296837 ct 21296838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 45331378 - 45331290
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcg 127  Q
    ||||||| |||||||||  |||||||||| ||| |||||| | || |||  |||||||||||||||| ||||||||||||||| |||||    
T  45331378 gcttatgtaaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcg 45331290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 4257383 - 4257286
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa--cagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||  ||| |||||||||||||| ||||| ||||||||    
T  4257383 cttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaaacagtttatgaagatacaattttcgctagtgaga 4257286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 7292652 - 7292762
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||||| |||||| |||    |||||||||||| |||  || ||||||| |||||||||||| |||||  ||||||||||||||||||    
T  7292652 ggattgacttat-tttgaacttatgtaaagcaacttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacag 7292750  T
Q  107 cttatgaagata 118  Q
     |||||| ||||    
T  7292751 tttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 10521162 - 10521252
Alignment:
Q  44 tgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||  ||| |||||| |||||||||| | ||||| ||||||||||||| ||||  ||||||||||| || ||| ||||||||    
T  10521162 tgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtga 10521252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 10667402 - 10667496
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||| |||||||||||  ||| |||||| |||||||||| | ||||| ||||||||||||| ||||  ||||||||||| || ||| ||||||||    
T  10667402 cttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtga 10667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 24842189 - 24842108
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||| || ||| |||||| ||||||| |||||||||||||||    
T  24842189 cttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatg-aaaaacaacttatgaagatacaa 24842108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 3870309 - 3870228
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||| |||||  |||||||||  | |||||||| | |||||||||||||||||||||||| | ||||| ||||||    
T  3870309 gcttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgataca 3870228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 30473223 - 30473151
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 114  Q
    |||||||||||||| || || ||||| |||| ||||| | || ||||||||||||||||||||| ||||||||    
T  30473223 tatgcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaa 30473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 32901230 - 32901134
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| |||||||||  ||||||| || |||||| || || || ||| |||||||| | |||||| |||||||||||| || ||||||||||||||    
T  32901230 cttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgttagtgaga 32901134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 43069079 - 43069131
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||||||||| |||||| |||||||||| |||||||||||||| |||||||    
T  43069079 tattcataagtttgtcaagatagtttatgagaaaacagcttatgaggatacaa 43069131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 3876364 - 3876270
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaag 115  Q
    |||||||||| |||||  ||||||| ||||||||   ||||||| || |||||||||  | || ||||||||||||||||||||| |||| ||||    
T  3876364 ttgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 20894481 - 20894602
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | || ||||||| ||||||||||| | ||||    
T  20894481 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aatgtagtttttgaaaaaacagttcatga 20894579  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    |||||||| ||||||||||||||    
T  20894580 agatacaattttcgttagtgaga 20894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 50022007 - 50021958
Alignment:
Q  83 tcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtg 133  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  50022007 tcaaggtagtttatgaaaaaacagcttatg-agataaaaatttcattagtg 50021958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 7300410 - 7300463
Alignment:
Q  83 tcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| |||||||||||||| || ||||| ||||||||| ||||||||||||||    
T  7300410 tcaagatagtttatgaaaaatcaacttataaagatacaattttcgttagtgaga 7300463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 43079958 - 43079917
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  43079958 aaaaaacagcttatgaagatacaattttcgtgattgagaact 43079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 43971922 - 43971833
Alignment:
Q  47 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||  ||||||| || |||||| ||||| || ||  |||||||||| ||||||  ||||||||||| || ||||||||||||||    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgaga 43971833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 242021 - 242081
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 66  Q
    |||||||||| | ||||| |||||| |||||| ||||||||||||||||| ||||||||||    
T  242021 ggattgacttgtttttgatcttatgtaaaaatagcttatgcaaataaataaacttttatgt 242081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 20685837 - 20685885
Alignment:
Q  88 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||    
T  20685837 gtagtttatcaaaaaacaacttatgaagatacaattttcattagtgaga 20685885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 36266249 - 36266309
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 101  Q
    ||||||||||||||| ||||||||||| |||| ||||||| || |||||| |||| |||||    
T  36266249 ttatgcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 20174973 - 20174930
Alignment:
Q  89 tagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagt 20174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 29270423 - 29270462
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaa 239  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  29270423 aaaaaacagcttatgaagatacaattttcgttaatgagaa 29270462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 30383739 - 30383858
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||||||| || || ||||||||||||||  | |||||| |||||| |  | || ||||  |||| |||| || || |||||||||||||||||||||     
T  30383739 ggattgactaattttagagcttatgcaaaatagtttatgcgaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaa 30383838  T
Q  107 cttatgaagatacaaatttc 126  Q
    | |||||| |||||| ||||    
T  30383839 cctatgaatatacaattttc 30383858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 37778182 - 37778233
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||||  | |||||||||||||| ||| ||||||||||    
T  37778182 aaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgaga 37778233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 11528875 - 11528973
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    ||||| |||||||||||   |||||| || ||||||  |||||||||| ||||||||| || || || ||||||||||| |||| |  |||||||||||    
T  11528875 tttgaacttatgcaaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagata 11528973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 19307979 - 19308037
Alignment:
Q  74 ataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||| || ||||||||||||||||||||| | |||||| |||||| ||| ||||||    
T  19307979 ataagtttgttaaggtagtttatgaaaaaacaacctatgaatatacaatttttgttagt 19308037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 29830680 - 29830625
Alignment:
Q  85 aaggtagtttatgaa----aaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||    ||||||| |||||||||||||| ||||||||||||||    
T  29830680 aaggtagtttatgaaaaaaaaaacagtttatgaagatacaattttcgttagtgaga 29830625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 33946644 - 33946536
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||||||||  |||||||||||||||||  ||||||| || ||||    ||||    |||||| ||||||||||| || |||||| |||||     
T  33946644 tttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatt----agtt----aaggtaatttatgaaaaaccaacttatgtagataa 33946553  T
Q  120 aaatttcgttagtgaga 136  Q
    || |||||||| |||||    
T  33946552 aattttcgttaatgaga 33946536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 29830663 - 29830622
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    ||||||||| |||||||||||| |||||||||| ||||||||    
T  29830663 aaaaaacagtttatgaagatacaattttcgttagtgagaact 29830622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 30499937 - 30500010
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 80  Q
    ||||| |||||| || |||||||| |||||  | ||||||||||||||| | ||||||||| |||| |||||||    
T  30499937 ggattaacttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataagtt 30500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 40240492 - 40240548
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 64  Q
    |||||||||||| |||||||||||| ||||  |||||||||||||||||  |||||||    
T  40240492 ggattgacttat-tttgagcttatgaaaaatagcttatgcaaataaataagcttttat 40240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 52021309 - 52021350
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||  |||||||||| ||||||||    
T  52021309 aaaaaacagcttatgaagatataattttcgttagtgagaact 52021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 20685957 - 20685909
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| ||| |||||||| |||| ||||||| ||||||||||    
T  20685957 ggattgacttattttttagcttatgaaaaattgcttatccaaataaata 20685909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 32131411 - 32131540
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||  |||||||| | ||||| |||||| |||||||||||||||||| |||||     
T  32131411 ggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaa 32131510  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    | ||||||||||||| ||||  ||||||||    
T  32131511 cctatgaagatacaattttcaatagtgaga 32131540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 16972464 - 16972344
Alignment:
Q  15 ttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatga 113  Q
    |||| ||| |||||||||||||    || ||||||||||||  ||| |||||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  16972464 ttattttttagcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatga 16972365  T
Q  114 agatacaaatttcgttagtga 134  Q
    |||||||| ||||||||||||    
T  16972364 agatacaattttcgttagtga 16972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 10299007 - 10298912
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||  |||||| ||||  ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  10299007 ttatgcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgaga 10298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 35453413 - 35453488
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 114  Q
    |||||||||||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  35453413 gcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatgaa 35453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 32975690 - 32975787
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  ||||||| || |||||||||| | |||||||||||||||||||| ||| ||||||||||||||| ||| ||| ||||||    
T  32975690 gcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgaga 32975787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 34286646 - 34286550
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||| |||||||||  |||||||||| |||||||||| | ||||||||||||| || ||||||||||||||||||||||| ||||||||| ||||    
T  34286646 gcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtg-aaaaacagcttatgaagatacaattttcgttagggaga 34286550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 19327855 - 19327966
Alignment:
Q  24 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaat 123  Q
    |||||||||||||   |||||||||||||||| ||||||||||| |||||||||||| || || |||||||||| |||||||| |||| ||||||||| |    
T  19327855 agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaatt 19327953  T
Q  124 ttcgttagtgaga 136  Q
    || |||| |||||    
T  19327954 tttgttaatgaga 19327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 28879061 - 28879139
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 117  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||| |||| |||||||||||    
T  28879061 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat 28879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 35168505 - 35168435
Alignment:
Q  58 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 128  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  35168505 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgt 35168435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 19925546 - 19925657
Alignment:
Q  25 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatt 124  Q
    |||||| |||||  |||||||||||||||||  ||||||  || |||| ||||||| || |||||| |||| |||||||||  |||||||||||||| ||    
T  19925546 gcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattt 19925645  T
Q  125 tcgttagtgaga 136  Q
    ||||||||||||    
T  19925646 tcgttagtgaga 19925657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 16706202 - 16706096
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||||||||  |||||||||||||||||   ||||||||| |||||||||||| |  || |||||||||||||||||| | || ||| ||||    
T  16706202 tttgagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaacaacatacgaatatac 16706103  T
Q  120 aaatttc 126  Q
    || ||||    
T  16706102 aactttc 16706096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 42363424 - 42363303
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||| | ||||||    
T  42363424 cttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatga 42363326  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    |||||||| ||| ||||||||||    
T  42363325 agatacaatttttgttagtgaga 42363303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 42102078 - 42102206
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||| |    
T  42102078 ggattaacttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccg 42102176  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
     | |||||||||||| |||||||| |||||    
T  42102177 ttaatgaagatacaattttcgttaatgaga 42102206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 11988202 - 11988296
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||   ||||||||| |||| |||||||  | ||||||||| |||||||||| | |||||||||||||| ||||||||||||||    
T  11988202 ttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 11988296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 13131408 - 13131539
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtca---------aggtagtttatgaaaaaac 104  Q
    ||||| ||| |||||||||||||    |||||||||||||||  |||||||||| |||||||||||| ||||         |||||||||||||||||||    
T  13131408 cttattttttagcttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtagtttatgaaaaaac 13131507  T
Q  105 agcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| |||||| ||| ||| ||||||    
T  13131508 agcttatgaaaatacaatttttgtttgtgaga 13131539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 24350600 - 24350509
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||| ||  ||||||| || |||||||||| | ||||| ||| |||||||||||| |||||||||||||| || ||||||||||    
T  24350600 ttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagt 24350509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 38895662 - 38895757
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||| ||||| |||||||| || |||||||||| | || ||||||||||||||||||| |  ||||||||||||||  || ||||||||    
T  38895662 gcttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtga 38895757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 12607086 - 12607179
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||| | |||||||||||||| || |||||||||||    
T  12607086 tatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacggtttatgaagatacaatttccgttagtgaga 12607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 35285931 - 35286013
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||||||||||||||  ||||| |||  |||||||||| | ||||| ||||||||||||||||  ||||||||||||||||    
T  35285931 gcttatgcaaataaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaa 35286013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 2669651 - 2669732
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    |||||||||||||||||  || | ||||| |||| ||||||| || ||||||||||||||||||||| |||||||| |||||    
T  2669651 gcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatataca 2669732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 9131211 - 9131118
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||| |||  |||||||||| |||| ||||| | ||| |  |||||| |||| ||||||||||||||||||||| ||||||||||    
T  9131211 gcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagt 9131118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 14709617 - 14709525
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||| ||||||  |||||| |||| ||||||||| | |||||| |||||||||||||||||||| ||||| |||||| ||| ||||||||    
T  14709617 ttatgcaactaaataagcttttaagtacaattcataagcttgtcaagctagtttatgaaaaaacagctcatgaa-atacaattttagttagtga 14709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 8217005 - 8216893
Alignment:
Q  22 tgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||| |||||||  |||||||||||| ||||  ||||| ||||| |||||||||  | ||| ||||||||||||||||||  || ||||||||||||    
T  8217005 tgagcttgtgcaaaatagcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatac 8216906  T
Q  120 aaatttcgttagt 132  Q
    || ||||||||||    
T  8216905 aattttcgttagt 8216893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 19925503 - 19925368
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| || ||||||||||| ||  | |||||||||||||||  | || ||||| |||| ||||  | || ||||||| |||||||| ||||     
T  19925503 ggattgacttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtag-ttatgaaataacaa 19925405  T
Q  107 cttatgaagatacaaatttcgttagtgagacattatg 143  Q
    |||||||| |||||| |||||||||| ||| ||||||    
T  19925404 cttatgaatatacaattttcgttagtaagatattatg 19925368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 8752811 - 8752906
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| |||||  ||||| |||| ||||| || ||  ||||| ||| ||||||||||||||||||| |||||||||||||| ||| ||||||    
T  8752811 ttatgcaaagaaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtttgtgaga 8752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 43577198 - 43577317
Alignment:
Q  13 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 112  Q
    |||||| || ||||||||||||||  | ||||||||||||||| |  || ||||| |||| |||| || || |||||||||||| |||||||| |||||     
T  43577198 acttattttagagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttataaaaaaacaacttata 43577297  T
Q  113 aagatacaaatttcgttagt 132  Q
    || ||| || ||||||||||    
T  43577298 aatataaaattttcgttagt 43577317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 32924314 - 32924216
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||||||||||||||  |||||||| ||||||||  ||||||| |  |||| ||||| | ||  | |||||||||||||||||| ||||||||||||    
T  32924314 tttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagata 32924216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 28280712 - 28280809
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  | |||||||| |||| ||||||| || || ||||||||||||||||| | |||||||| || |  ||| ||||||||||    
T  28280712 gcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaaggtataccttttgttagtgaga 28280809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 30973960 - 30974085
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| || |||||||||||||   ||||||| ||||||| |  | || ||||| |||| |||| || || |||| ||||||||||||||||     
T  30973960 ggattggcttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaaaaacaa 30974059  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
    ||||||||  ||||| ||||||||||    
T  30974060 cttatgaatttacaattttcgttagt 30974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 24867011 - 24866943
Alignment:
Q  62 tatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||||| |||| ||||| | || || |||||||||||||||||||||||||||| ||||| ||||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgtta 24866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 25333771 - 25333720
Alignment:
Q  82 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  25333771 gtcaaggtagtttatgaaaaa-caacttatgaagatacaattttcgttagtga 25333720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 37410950 - 37410903
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  37410950 aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagt 37410903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 32213105 - 32213043
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 101  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||| | |||||||||||||    
T  32213105 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaa 32213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 38338958 - 38338837
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   |||||  || |||| |||||||  | ||||||||||||||||||| || ||||||    
T  38338958 cttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttttt-aaggtagtttatgaaaaaatagtttatga 38338860  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    |||||  | ||||||||||||||    
T  38338859 agatatgattttcgttagtgaga 38338837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 41145481 - 41145382
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 135  Q
    |||||||||||||||||  ||||||| || ||||   |||||||| || ||||||||||||||||||||| ||| | ||||||| | |||| ||||||||    
T  41145481 gcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaactt-taaagatacgattttcattagtgag 41145383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 16972270 - 16972327
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 64  Q
    |||||||||||  ||||||||||| |||||  ||||||||||||||||| ||||||||    
T  16972270 ggattgacttaattttgagcttattcaaaatagcttatgcaaataaataaacttttat 16972327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 2563363 - 2563443
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||||||||||| |  || ||||| |||| ||||||| || || |||||||||||||||||| ||| |||| ||||||    
T  2563363 ttatgcaaataaataaatattaatgtattatttataagtttgttaaagtagtttatgaaaaaacaacttttgaatatacaa 2563443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 14262330 - 14262422
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||| |  | || ||||  |||| |||| || || ||||||||||||||||||||| |||||||| |||||| ||| ||||||    
T  14262330 cttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttagt 14262422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 14942395 - 14942519
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| || ||||||||| ||||   |||||| | |||||||  ||||| |||| |||| ||||| | || ||| ||||||||||||||||      
T  14942395 ggattggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacga 14942494  T
Q  107 cttatgaagatacaaatttcgttag 131  Q
    ||||||||||| ||| ||| |||||    
T  14942495 cttatgaagatgcaatttttgttag 14942519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 32751143 - 32751234
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||| | |||||||||||||| |||||||  | || |||||||||| ||||||||  |||| || |||||| ||||||||||    
T  32751143 ttatgcaaataaataaatttttatgtactattaataagtt-tttaaagtagtttatgaaaaaaacattttataaaaatacaattttcgttagt 32751234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 218333 - 218244
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  218333 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 694893 - 694804
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  694893 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 694804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 699102 - 699013
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  699102 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 699013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 731956 - 731867
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  731956 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 731867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 855852 - 855763
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  855852 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 855763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 28879227 - 28879168
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  28879227 ggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28879168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 36907681 - 36907634
Alignment:
Q  85 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||    
T  36907681 aaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagt 36907634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 13265489 - 13265547
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||||||||||||  |||||||||| |||||||||| | ||||| |||||| |||||    
T  13265489 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16706027 - 16706073
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||||||||  |||||||||||||||||  |||||||||    
T  16706027 tttgagcttatgcaaaacagcttatgcaaataaatacgcttttatgt 16706073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 10298950 - 10298909
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  10298950 aaaaaacagcttatgaagatacaatttttgttaatgagaact 10298909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 16972380 - 16972339
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||| ||| ||||    
T  16972380 aaaaaacagcttatgaagatacaattttcgttagtgataact 16972339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 24866975 - 24866934
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  24866975 aaaaaacagcttatgaaggtacaattttcgttatcgagaact 24866934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 2019764 - 2019716
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||||||||| || ||||||||||||||   ||||||||||||||||    
T  2019764 ggattgacttattttagagcttatgcaaaacatcttatgcaaataaata 2019716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 7638511 - 7638567
Alignment:
Q  24 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 80  Q
    ||||||||||||| || ||||||||||||||   |||||||||| |||| |||||||    
T  7638511 agcttatgcaaaactgtttatgcaaataaatcagcttttatgtattattaataagtt 7638567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 29243146 - 29243083
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||||||||  |||||||||| |||| |||||||  | |||||||||||| ||||||    
T  29243146 gcttatgcaaataaataagcttttatgtattatttataagtt-tttaaggtagtttattaaaaaa 29243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 34286587 - 34286547
Alignment:
Q  201 aaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  34286587 aaaaacagcttatgaagatacaattttcgttagggagaact 34286547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 35055468 - 35055522
Alignment:
Q  85 aaggtagtttatgaaaaaacagc---ttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||||| | |   |||||||||||||| ||||||||||||||    
T  35055468 aaggtagtttatgaaaaaaaaaccatttatgaagatacaattttcgttagtgaga 35055522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 38195491 - 38195586
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||   |||||| || |||| |||||||  | ||||||||||| |||||||||| ||||| | |||||| ||| |||| |||||    
T  38195491 cttatgcaaataaataagtttttatatattatttataagttttt-aaggtagtttacgaaaaaacagtttatggaaatacaatttttgttaatgaga 38195586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 28625483 - 28625580
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28625483 gcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgaga 28625580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 42851993 - 42852121
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| |||| ||||||||||||  |||||| ||||||||||  |||||||||| |||||||||| | |||||| |||||||||||||||||     
T  42851993 ggattggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaa 42852092  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| || |||||| ||||||||||||||    
T  42852093 cttat-aaaatacaattttcgttagtgaga 42852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 13060684 - 13060588
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  |||||||||| | |||||||| | |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  13060684 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgaga 13060588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 41534628 - 41534716
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 129  Q
    |||||||||||||||  |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtt 41534716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 14243794 - 14243909
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat-gaaaaaaca 105  Q
    |||||||||||| |||||| ||||||||||  ||||||| |||||||||  ||| |||||| ||||||||||||| | |||||||||||| |||||||||    
T  14243794 ggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaaaca 14243893  T
Q  106 gcttatgaagatacaa 121  Q
    ||||||||| ||||||    
T  14243894 gcttatgaaaatacaa 14243909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 12467243 - 12467365
Alignment:
Q  15 ttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatga 113  Q
    |||| |||||| |||| ||||||   |||||||||||||||  |||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||    
T  12467243 ttatttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatga 12467342  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    ||| |||| ||| ||||||||||    
T  12467343 agagacaatttttgttagtgaga 12467365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 22202044 - 22201918
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat----gaaaaaacagctt 109  Q
    ||||| |||||||||||||||||  ||||||| |||||||||  |||||||||| |||||||||| | |||||||||||||||    ||||||| |||||    
T  22202044 cttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagctt 22201945  T
Q  110 atgaagatacaaatttcgttagtgaga 136  Q
     ||||||||||| ||||||||| ||||    
T  22201944 gtgaagatacaattttcgttagcgaga 22201918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 29922296 - 29922175
Alignment:
Q  15 ttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 114  Q
    |||| |||||||||||||||||  | |||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||| |||||||||| |    
T  29922296 ttatttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgca 29922197  T
Q  115 gatacaaatttcgttagtgaga 136  Q
     |||||| |||  |||||||||    
T  29922196 tatacaattttttttagtgaga 29922175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 41419534 - 41419601
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41419534 tattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgaga 41419601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 1473340 - 1473441
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||||||| || ||   ||||||||||||||||  |||||||||| |||||||||| | |||||| || ||||||||||||||||||||||||||||    
T  1473340 tttgagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatac 1473439  T
Q  120 aa 121  Q
    ||    
T  1473440 aa 1473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 1576602 - 1576730
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| |||||  ||| ||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||| |||||||     
T  1576602 ggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaa 1576700  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||| ||||||||||| ||| ||||||||||    
T  1576701 cttgtgaagatacaatttttgttagtgaga 1576730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 1608213 - 1608085
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| |||||  ||| ||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||| |||||||     
T  1608213 ggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaa 1608115  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||| ||||||||||| ||| ||||||||||    
T  1608114 cttgtgaagatacaatttttgttagtgaga 1608085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 1868853 - 1868946
Alignment:
Q  43 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||| ||||||||  |||||||||| |||||| ||| | ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  1868853 atgctaataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgaga 1868946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 24030190 - 24030314
Alignment:
Q  11 tgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagctta 110  Q
    |||||||| ||| ||||||| |||||  |||||| ||||||||||  |||||||||| |||||||||| | ||||| |||||||||||||||||| |||     
T  24030190 tgacttatttttaagcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca-cttg 24030288  T
Q  111 tgaagatacaaatttcgttagtgaga 136  Q
     || ||||||| ||||||||||||||    
T  24030289 cgaggatacaattttcgttagtgaga 24030314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 12987096 - 12987000
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  |||||||||| | |||||||| | ||||||||||||||||||||||||| |||||||| ||| | ||| ||||||||||    
T  12987096 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtgaga 12987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 17657246 - 17657342
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  |||||||||| |||||||||| | | ||  |||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgaga 17657342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 2878778 - 2878665
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||||||||| |||  |||||||||||||||||  ||||||| || |||||||||||| ||||| || |||||||||| ||||| ||| ||||||||    
T  2878778 tttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatac 2878680  T
Q  120 aaatttcgttagtga 134  Q
    || ||| ||||||||    
T  2878679 aatttttgttagtga 2878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 42706799 - 42706896
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat--gaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||||||||   |||||||||||||||||||||||| |||||| |||||    
T  42706799 gcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttatgaagatacaattttcgtcagtga 42706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 2670059 - 2670140
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 101  Q
    |||||||||||| ||||  | ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||    
T  2670059 tttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 3520617 - 3520509
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||| |||||||||||||  | ||||| |||||||||  |||||| ||| |||||||||| | |||||||||||||| || |||||||    
T  3520617 ggattgacttattttttagcttatgcaaaacagtttatgtaaataaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaaacag 3520519  T
Q  107 cttatgaaga 116  Q
    ||||||||||    
T  3520518 cttatgaaga 3520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 15413963 - 15414088
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| || ||||||||||||||  |||||||||||||||||    || ||||| |||| ||||||| || |||||||||||  ||||||||     
T  15413963 ggattgacttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaaacaa 15414062  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
    |||||||| |||||| ||| ||||||    
T  15414063 cttatgaatatacaatttttgttagt 15414088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 17128250 - 17128343
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 101  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||  |  |||| ||||||||||||||    
T  17128250 gattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaa 17128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 41059872 - 41059775
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||| |||||  |||||||||| |||||||||| |  ||||||| |||||||||||| || ||||||||||| ||| ||||||||||||||    
T  41059872 gcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgaga 41059775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 31637158 - 31637087
Alignment:
Q  58 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 129  Q
    |||||||||| |||||||||| | ||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  31637158 cttttatgtattattcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaattttcgtt 31637087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 1372108 - 1371979
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||| ||||| | || || || |||||||| |||||||    
T  1372108 ggattgacttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatga-aaaacag 1372010  T
Q  107 cttatgaagatacaaatttcgttagtgagac 137  Q
     | ||||||||  || |||||||| ||||||    
T  1372009 ttgatgaagatttaattttcgttaatgagac 1371979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 5559985 - 5559905
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaa---cagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| | |||||||| | ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||    
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattttcgttagtgaga 5559905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 35536845 - 35536945
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcat---aagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 135  Q
    ||||||||||||| |||  |||||||||  |||||||   ||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  35536845 gcttatgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgag 35536944  T
Q  136 a 136  Q
    |    
T  35536945 a 35536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 40452561 - 40452463
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa-atttcgttagtgaga 136  Q
    |||||||||||  ||||  |||||||| | |||||||||| | |||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||    
T  40452561 gcttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgaga 40452463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 43318981 - 43319103
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||||||||   ||||||||||||||||    |||||||| |||| ||||| | || || ||||||||||||||||||| ||||||    
T  43318981 cttattttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatga 43319080  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    || || || ||||||||||||||    
T  43319081 aggtataattttcgttagtgaga 43319103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 10537320 - 10537235
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||||||||| ||||  |||||||||||||||||  |||||||||| |||| ||||| | |||||| ||||||||||||||||||    
T  10537320 ttgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaacag 10537235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 26002968 - 26003097
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || |||||||| |||||  | |||||||||||||||   ||||||||| |||| ||||||| || ||| || |||||||||||   |    
T  26002968 ggattaacttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtgg 26003067  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
     |||||||||||||| ||||||||||||||    
T  26003068 tttatgaagatacaattttcgttagtgaga 26003097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 28357355 - 28357452
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  | | |||||| |||| ||||||| || || ||||||||||||||||||| |||||||| | ||| ||||||||||||||    
T  28357355 gcttatgcaaataaatatgcctatatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgaga 28357452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 13625604 - 13625508
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga-aaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||||||||||||  ||||||| || |||||||||| | ||  ||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  13625604 gcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtga 13625508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 341968 - 342075
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| ||||||||||||||||    || ||| |||||||||   ||||||||| |||| | ||||| | ||||||||||||||||||| ||||||||||    
T  341968 cttatttttgagcttatgcaaagcaactcatgtaaataaataagtttttatgtattatttacaagtttgccaaggtagtttatgaaaaatcagcttatga 342067  T
Q  114 agatacaa 121  Q
    ||||||||    
T  342068 agatacaa 342075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 11912182 - 11912088
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| ||||||||  |||||||||| | |||||||  | ||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||||    
T  11912182 tatgctaataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgaga 11912088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 15122549 - 15122649
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgagacat 139  Q
    |||||||||| |||||   ||||||||| |||| |||||||  | |||||||||||||||||||||| |||||||||||||| ||||||  |||||| ||    
T  15122549 cttatgcaaagaaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgtccgtgagaaat 15122647  T
Q  140 ta 141  Q
    ||    
T  15122648 ta 15122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3977483 - 3977551
Alignment:
Q  44 tgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 112  Q
    |||||||||||| |||||| || | |||||||||| | ||||||||||||||||||||||||| |||||    
T  3977483 tgcaaataaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg 3977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 7364411 - 7364295
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||| ||||  ||| ||||||| |||||  ||| ||| || |||||||||| | || |||||||||||| || ||||| |||||||||||||    
T  7364411 tttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatac 7364312  T
Q  120 aaatttcgttagtgaga 136  Q
    ||  || ||||||||||    
T  7364311 aatatttgttagtgaga 7364295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 43268704 - 43268644
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||||||||||||||  |||||||||| |||| ||||| ||||||||||||||||||||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 11163384 - 11163290
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 101  Q
    |||||||||||| ||| |||||||||||||  ||||||| |||| ||||   |||||||||  ||||||||| | ||| ||||||||||||||||    
T  11163384 ggattgacttattttttagcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagtttatgaaaa 11163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 40416071 - 40415973
Alignment:
Q  23 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||||||||||   ||||||||||||| || || || ||||| |||| ||||||| || ||||||||| ||||||||||| |||| ||| ||||||    
T  40416071 gagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagttcatgaaaaaacaacttaagaatatacaa 40415973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 6144749 - 6144838
Alignment:
Q  47 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||  ||||||| || || ||||||| | ||||||||| |||||||||||| |||||||||| |||||| ||| ||||| ||||    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgaga 6144838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 11991276 - 11991404
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||   ||||||||||||   |||||| |||||||||  |||||||||| |||| ||||| | || ||  | ||||||||||||| ||    
T  11991276 ggattgacttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaatag 11991375  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
     ||||||| |||||| ||||||||||||||    
T  11991376 -ttatgaacatacaattttcgttagtgaga 11991404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 38461357 - 38461268
Alignment:
Q  47 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||  | |||||||| |||| ||||||| || || ||| ||||||||||||||| ||||||||||| || ||| ||||||||||    
T  38461357 aaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtgaga 38461268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 11707015 - 11706919
Alignment:
Q  25 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||||||||  || ||||||||||||||  ||||||||||  |||| |||  | ||||| ||| |||||||| ||||| |||||||||||||||    
T  11707015 gcttatgcaaaacagcctatgcaaataaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaa 11706919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 28357187 - 28357235
Alignment:
Q  82 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  28357187 gtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgtta 28357235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 42558834 - 42558740
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||| |||| | ||||||||||  |||||||  ||||||||  |||||| |||||||||||||||| || || ||||||||||||||||    
T  42558834 ggattgacttatttttg-gattatgcaaaacagcttatgtgaataaataagcttttacgtactattcataagtttgttaa-gtagtttatgaaaaaa 42558740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 40697004 - 40697091
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-----aaaaaacagcttatgaagatacaa 121  Q
    |||||||||||||||||   ||||||||| |||| ||||| | ||||||||| ||||||     ||||||||||||||||||||||||    
T  40697004 gcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagcttatgaagatacaa 40697091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 27982026 - 27981916
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagc 107  Q
    ||||||||||| ||||| ||||| |||||   |||||| ||||||||| | ||||||||| ||||||||| ||  |  ||||| |||||||||||||| |    
T  27982026 gattgacttatttttgaacttatacaaaacatcttatgaaaataaataaatttttatgtattattcataaatttatttaggtaatttatgaaaaaacaac 27981927  T
Q  108 ttatgaagata 118  Q
    | || ||||||    
T  27981926 taataaagata 27981916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 29418836 - 29418738
Alignment:
Q  38 tgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||||    |||||||| |||| |||||   |  || ||||||||||||||||||  |||||||| ||||| ||||||||||||||    
T  29418836 tgcttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgaga 29418738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 17657304 - 17657345
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
T  17657304 aaaaaacatcttatgaagatacgattttcgttagtgagaact 17657345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 30852176 - 30852237
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 102  Q
    ||||||||||||||| ||||||||||| |||| ||||||| || || ||||||||| |||||    
T  30852176 ttatgcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttataaaaaa 30852237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 33757066 - 33757170
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | ||| |||||||||||||||||| | ||||    
T  33757066 cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaagctagtttatgaaaaaacagttaatga 33757164  T
Q  114 agatac 119  Q
    ||||||    
T  33757165 agatac 33757170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 35536907 - 35536948
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  35536907 aaaaaacagcttatgaagatacaattttcgttactgagaact 35536948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 41419563 - 41419604
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  41419563 aaaaaacagcttatgaagatacaattttcgttagtgagaact 41419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 7984109 - 7984205
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||| ||   ||||||||| |||||||||||| ||||| || ||||  |||||||||| |||  ||||||||| |||| | |||||||    
T  7984109 cttatgcaaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcataagtgaga 7984205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 28625542 - 28625582
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaac 240  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  28625542 aaaaaacagcttatgaagatacaattttcgttagtgagaac 28625582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 780648 - 780558
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||||  | |||| || |||||| |||| |||||    
T  780648 ttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttatgaaaaaatgggttatcaaaatacaattttcattagt 780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 6026083 - 6025977
Alignment:
Q  23 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 122  Q
    |||||||| |||||  | |||||||||||||||   ||||||||| |||| |||| || || || ||||||||||||||||| | |||| |||||||||     
T  6026083 gagcttatacaaaatagtttatgcaaataaatatg-ttttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatacaat 6025985  T
Q  123 tttcgtta 130  Q
    ||| ||||    
T  6025984 ttttgtta 6025977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 6125291 - 6125393
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgagacat 139  Q
    |||||| ||||||||| ||||||||||| |||||||||  |  | || ||| |||||| ||||| |||||||||| ||||||  || |||||||||| ||    
T  6125291 cttatgtaaataaataaacttttatgtattattcataatcttataaatgtattttatg-aaaaatagcttatgaatatacaatatttgttagtgagaaat 6125389  T
Q  140 tatg 143  Q
    ||||    
T  6125390 tatg 6125393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 16722032 - 16722126
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||   ||||||||| |||| |||| ||  | ||||||||||| ||| |||| | |||||||||||||  ||||||||||||||    
T  16722032 ttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagtttacgaagaaaccgtttatgaagatacacttttcgttagtgaga 16722126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 20458665 - 20458551
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||| ||||||    ||||||    
T  20458665 cttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttataaaaaaatgtgttatga 20458567  T
Q  114 agatacaaatttcgtt 129  Q
    | |||||| |||||||    
T  20458566 aaatacaattttcgtt 20458551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 6150358 - 6150437
Alignment:
Q  13 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 96  Q
    |||||| |||||| ||||||||||  |||||||||||| |      ||||||||| |||||||||||| |||||||||||||||    
T  6150358 acttatttttgagtttatgcaaaacagcttatgcaaatgagg----ttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 29659065 - 29659160
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  |  |||||||| |||| ||||| | || || |||||||| |||||||||| |||||||  ||||| |||| |||||||||    
T  29659065 gcttatgcaaataaat--atgtttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgaga 29659160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 35537016 - 35536945
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 80  Q
    |||||||||||| |||||| ||||| ||||  |||||||||||||||||  ||||||  || ||||||||||||    
T  35537016 ggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagctttta--tattattcataagtt 35536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 41125675 - 41125733
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 65  Q
    |||||| ||||| |||||||||||||||||   |||||||||||||| || ||||||||    
T  41125675 ggattggcttatttttgagcttatgcaaaacaacttatgcaaataaacaggcttttatg 41125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 13060626 - 13060585
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||| ||| |||||||||| ||||||||    
T  13060626 aaaaaacagcttatgaagttaccattttcgttagtgagaact 13060585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 22573637 - 22573718
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 101  Q
    |||||||||||||||||   |||||||||||||||    |||| |||| |||| ||||||| || || ||||||||||||||    
T  22573637 tttgagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaa 22573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 23087842 - 23087765
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| |||| ||||| | || ||  ||||||||||||||||| || |||||| ||||| ||| ||||||||||    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgaga 23087765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 33803874 - 33803814
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactat--tcataagttggtcaaggtagtttatgaa 99  Q
    |||||||||| ||||  ||||||||||||||  |||||| || ||||||||||||||||||    
T  33803874 ttatgcaaatcaataagcttttatgtactatattcataaatttgtcaaggtagtttatgaa 33803814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 39990580 - 39990661
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||| |||||||||| || || ||||| |||| ||| ||| || |||||| |||||||||||||| |||| ||| ||||||    
T  39990580 cttatacaaataaataaacattaatgtattatttatatgtttgttaaggtaatttatgaaaaaacatcttaagaatatacaa 39990661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 40452391 - 40452463
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 80  Q
    |||||| ||||| |||||||||||| ||||  |||||||||||||||||  || ||||||  ||||||||||||    
T  40452391 ggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctattatgt-ttattcataagtt 40452463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 1576803 - 1576743
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 66  Q
    |||||| ||||| |||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  1576803 ggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgt 1576743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 1608012 - 1608072
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 66  Q
    |||||| ||||| |||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  1608012 ggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgt 1608072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 1943013 - 1943073
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||||||| ||||||   ||||||||| ||| |||||| | ||||||||||||||||||    
T  1943013 gcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa 1943073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 5559948 - 5559904
Alignment:
Q  195 tgaataaaaaacagcttatgaagatacgattttcgttattgagaa 239  Q
    |||| ||||| |||||||||||||||| |||||||||| ||||||    
T  5559948 tgaaaaaaaagcagcttatgaagatacaattttcgttagtgagaa 5559904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 27805961 - 27806013
Alignment:
Q  82 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||| ||||||||||||||||||  |||| ||||||||| ||| ||||||||    
T  27805961 gtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgttagtga 27806013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 43010639 - 43010695
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 96  Q
    |||||| ||||||||| ||||||||||| |||||||| ||| ||||  |||||||||    
T  43010639 cttatgtaaataaataaacttttatgtattattcatacgtttgtcattgtagtttat 43010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 4068086 - 4068215
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||| ||||| ||| ||||| |||||||  |||| ||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||||||||     
T  4068086 ggattggcttattttttagcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaa 4068185  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||| | ||||||||||||||    
T  4068186 cttatgaagatactattttcgttagtgaga 4068215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 35590101 - 35590230
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| ||| |||||||| ||||   ||||||||||||||||  ||||||||||   |||||||| | |||||||| ||||||||||||||||    
T  35590101 ggattgacttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacag 35590200  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||| |||||| |||||||    
T  35590201 cttatgaagatacaattttcgtcagtgaga 35590230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 26946220 - 26946092
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaaca 105  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||||  ||||| ||||  |||||||||| | || |||||||||||||||||||||    
T  26946220 ggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaaca 26946121  T
Q  106 gcttatgaagatacaaatttcgttagtga 134  Q
     ||||||||||||||| |||| |||||||    
T  26946120 acttatgaagatacaattttccttagtga 26946092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 15515428 - 15515333
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| ||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  15515428 ttatgctaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgaga 15515333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 6337839 - 6337742
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||| |||||||||  |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  6337839 gcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgaga 6337742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 36423064 - 36422967
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  ||||||| || |||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  36423064 gcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgaga 36422967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 37712039 - 37712163
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||||| |||| |||||||| ||| ||||  | |||||||||| ||||  |||||||||| |||||||||| | ||||||||||||||||||||||||     
T  37712039 ggattgatttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgta-tattcataagcttgtcaaggtagtttatgaaaaaacaa 37712137  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||| ||||||||||    
T  37712138 cttatgaagatacaactttcgttagt 37712163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 28689973 - 28690104
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagac--ttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 104  Q
    |||||| ||||| ||| || ||||||| ||  ||||||||||||||||| |   ||||||||| |||||||||||| |||||||||||||||||| ||||    
T  28689973 ggattggcttattttttagtttatgcagaacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttatgaacaaac 28690072  T
Q  105 agcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||| |||  |||||||||    
T  28690073 agcttatgaagatacaatttttattagtgaga 28690104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 37329493 - 37329398
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||   |||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  37329493 ttatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgaga 37329398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 48819302 - 48819399
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||   |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  48819302 gcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgaga 48819399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 26435288 - 26435161
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagc 107  Q
    ||||||| ||| ||||||||||| |||||  ||||||||||||||||| | ||||||||| ||||  |||||| ||||| ||||||||||||||||| |     
T  26435288 gattgacatatttttgagcttatacaaaacagcttatgcaaataaata-agttttatgtattatttttaagtttgtcaaagtagtttatgaaaaaactgt 26435190  T
Q  108 ttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||  |||||||| |||||    
T  26435189 ttatgaagatacatttttcgttactgaga 26435161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 16889042 - 16888952
Alignment:
Q  45 gcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||  |||||||||| |||||||||| | || ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16889042 gcaaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgaga 16888952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 18327495 - 18327617
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| || ||  |||| |||||  |||||||||||||||||  |||||||||| || ||||||| | |||||| ||||||||||||||||||    
T  18327495 ggattgacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacag 18327594  T
Q  107 cttatgaagatacaaatttcgtt 129  Q
    |||||||| | |||| |||||||    
T  18327595 cttatgaacacacaattttcgtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 26988158 - 26988244
Alignment:
Q  46 caaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||  |||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26988158 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagt 26988244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 49971229 - 49971351
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||||||||   ||||||||||||||||  | ||||| || |||| ||||| | || || ||||||||||||||||||||||| ||    
T  49971229 cttattttagagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacga 49971328  T
Q  114 agatacaaatttcgttagtgaga 136  Q
    |||||||| ||||||||||||||    
T  49971329 agatacaattttcgttagtgaga 49971351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 3069937 - 3069840
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| ||||||| ||  |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  3069937 gcttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgaga 3069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 41196773 - 41196696
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 41196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 13038932 - 13039047
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||| ||||||||||  ||| |||||||||||||  ||||||| || ||||||| || | || ||||||||||||||||||||| |||||||||||| |    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  121 aatttcgttagtgaga 136  Q
      ||||||||||||||    
T  13039032 gttttcgttagtgaga 13039047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 32497379 - 32497258
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||||| ||||||    
T  32497379 cttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatga 32497281  T
Q  114 agatacaaatttcgttagtgaga 136  Q
     ||||||| ||||||||||||||    
T  32497280 ggatacaattttcgttagtgaga 32497258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 9572886 - 9572770
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||||||||||||  |||| ||||||||||||  ||||| || || |||||||||||| || |||||||||||||||||||||  |||||||||||     
T  9572886 ttgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataa 9572787  T
Q  120 aaatttcgttagtgaga 136  Q
    |  ||| ||||||||||    
T  9572786 agtttttgttagtgaga 9572770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 1321513 - 1321635
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcat-aagttggtcaaggtagtttatgaaaaaaca 105  Q
    |||||||||||| |||||||||| ||||||  ||||||||||||||||| |  || ||||| ||||||| ||||| ||||||||||| ||||||||| ||    
T  1321513 ggattgacttatttttgagcttacgcaaaatggcttatgcaaataaata-agcttgatgtattattcataaagtttgtcaaggtagtgtatgaaaaagca 1321611  T
Q  106 gcttatgaagatacaaatttcgtt 129  Q
    ||||||  | |||||| |||||||    
T  1321612 gcttattgaaatacaactttcgtt 1321635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 51162256 - 51162363
Alignment:
Q  23 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 122  Q
    |||||||||||||   |||||||||||||||||  | || ||||| |||| | ||||| || ||||||||||||||||||||| |||||||| ||||||     
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  123 tttcgtta 130  Q
    ||||||||    
T  51162356 tttcgtta 51162363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 45267468 - 45267562
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa-aacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  |||||  ||| |||| || || | |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  45267468 gcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttagt 45267562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 1005343 - 1005440
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  |||||| ||| |||||||||| | ||| |||||||| ||||||||||  ||||||||||||||| ||| | ||||||||    
T  1005343 gcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaatttttgatagtgaga 1005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 16225480 - 16225607
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    |||||||||||| || ||||||||||||||  | ||||| |||||||||   ||||||||| || | ||||||| || |||||| |||| |||||||||     
T  16225480 ggattgacttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagtt-gttaaggtaatttaggaaaaaacaa 16225578  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||| | ||||||||||||||    
T  16225579 cttatgaagatac-agtttcgttagtgaga 16225607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 17628507 - 17628411
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| ||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  17628507 gcttatacaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 17628411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 17814168 - 17814286
Alignment:
Q  13 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 112  Q
    |||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||||  | |||||    
T  17814168 acttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttatgaaaaaatgggttatg 17814266  T
Q  113 aagatacaaatttcgttagt 132  Q
    || |||||| ||||||||||    
T  17814267 aaaatacaattttcgttagt 17814286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 26542977 - 26543071
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||||||||  |||||||||| |||  ||||||| || || |||||||||||||||||| |||| |||  ||||| ||||||||||||    
T  26542977 cttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaagtacaattttcgttagtga 26543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 15631891 - 15632004
Alignment:
Q  23 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 122  Q
    |||||||| |||||   ||||| ||||||||||   ||||||||| |||| ||||||| || || ||| ||||||||||||| | ||||||| ||||||     
T  15631891 gagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatacaat 15631990  T
Q  123 tttcgttagtgaga 136  Q
    ||||||||||||||    
T  15631991 tttcgttagtgaga 15632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 20169248 - 20169349
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||| ||||  |||||||||||||||||  |||||||||| |||| |||||||  | ||  |||||||||||||||||| |||| || ||||    
T  20169248 tttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatac 20169347  T
Q  120 aa 121  Q
    ||    
T  20169348 aa 20169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 50919493 - 50919581
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||||||||||||| || |||| | || |||| ||||||| ||||| ||||||||| ||||||||| |||||||||||||| ||||||||    
T  50919493 ttatgcaaataaat-gagttttttatattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattttcgtta 50919581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 5243511 - 5243396
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   |||| |||| |||| |||||||  | ||||||||||||||||||| || ||||||    
T  5243511 cttattttagagcttatataaaacagcttatgcaaataaataagtttttgtgtattatttataagttttt-aaggtagtttatgaaaaaatagtttatga 5243413  T
Q  114 agatacaaatttcgtta 130  Q
    |||||||| ||||||||    
T  5243412 agatacaattttcgtta 5243396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 13412534 - 13412439
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||| ||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   | |||||||||||||||| ||||||||||    
T  13412534 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccattcatgaagatacaaattttgttagtgaga 13412439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 23544819 - 23544875
Alignment:
Q  64 tgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaataca 23544875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 1265806 - 1265715
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 100  Q
    |||||||||| |||||||||||||||||   ||||| |||| | |||   ||||||||| ||||||||| || |||||||||||||||||||    
T  1265806 attgacttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 10850173 - 10850090
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||||||||  | || ||||||||||||  |||||||||| |||||||||| | ||||| |||||||||| |||||    
T  10850173 tttgagcttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaa 10850090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 46689651 - 46689536
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||  | ||||||||||||| |  ||||||| || ||||||| || | || |||||| ||||| | |||||| |||||||| ||| |    
T  46689651 ttgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaa 46689552  T
Q  121 aatttcgttagtgaga 136  Q
    | ||||||||||||||    
T  46689551 attttcgttagtgaga 46689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 5347159 - 5347248
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||||  | ||||||| |||||| ||||||||    
T  5347159 cttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgtta 5347248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 46473078 - 46473176
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||||||||||||||  |||| || |||||||||  ||||||| || ||||||| || |  | |||||||| |||||||||||| ||||||||||||    
T  46473078 tttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagata 46473176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 3116144 - 3116052
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||| | ||||||||  | || |||||||  | ||||||||||||||||||||   |||||||||||||| ||||||||||    
T  3116144 gcttatgcaaataaataaatttttatgttttgtttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagt 3116052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 10082254 - 10082335
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||   ||||||||  |||| ||||||| |||||||||||||||| |||||||| |||||||| |||||    
T  10082254 cttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaataca 10082335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 15791355 - 15791483
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||  |    
T  15791355 ggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaatcg 15791453  T
Q  107 cttatgaagatacaaatttcgttagtgaga 136  Q
     | |||||||||||| |||||||| |||||    
T  15791454 ttaatgaagatacaattttcgttaatgaga 15791483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 22593490 - 22593393
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||| | ||||||||| |||||||||| | || || | |||||| |||||| ||  |||| ||||||||| ||| ||||||||||    
T  22593490 gcttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgaga 22593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 31378834 - 31378741
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  ||||||| || |||| | ||| | ||||||||||||||||||||||  | |||| ||||||||| ||| ||||||    
T  31378834 gcttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgttagt 31378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 37148208 - 37148112
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||| ||  ||||||||||||   |||||||||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||||    
T  37148208 ggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 37157033 - 37156937
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||| ||  ||||||||||||   |||||||||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||||    
T  37157033 ggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 41003376 - 41003487
Alignment:
Q  25 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatacaaat 123  Q
    |||| ||||||||  ||||||||||||||||   ||||||||| |||| ||||||| ||| ||||||||||||| ||||||||||||  |||||| || |    
T  41003376 gcttgtgcaaaaaaacttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatg-aaaaacagcttactaagatataatt 41003474  T
Q  124 ttcgttagtgaga 136  Q
    ||  |||||||||    
T  41003475 tttattagtgaga 41003487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 10365176 - 10365266
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||| |||| ||||||||||| |||| ||||| | ||||| |||||||||| ||||||| |  ||||| |||||| ||||||||||    
T  10365176 ttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatg-aaaaacaaccgatgaatatacaattttcgttagt 10365266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 18317034 - 18317101
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||| | |||||||||| ||||||||||||| | |||||||||||||  ||||||| |||||    
T  18317034 tattcataagattgtcaaggtaggttatgaaaaaacatcctatgaagatacaatattcgttaatgaga 18317101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 37712239 - 37712180
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| |||||||||| | ||||  ||||||||||||||||| ||||||||||    
T  37712239 ggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgt 37712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 39658376 - 39658317
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 128  Q
    |||||||||| | | ||||||| |||||||||||||||||||||||| ||||| ||||||    
T  39658376 tattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaattttcgt 39658317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 39941516 - 39941587
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    |||||||||||||  | ||||||||| |||||||||| | ||||| |||||| ||||||||||| |||||||    
T  39941516 tatgcaaataaatgaatttttatgtattattcataagcttgtcaaagtagttaatgaaaaaacaacttatga 39941587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 1565495 - 1565368
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa-aaaaca 105  Q
    |||||||||||  | |||||||||| || |  ||||||| ||||||| |  |||||||| | ||||| |||| | |||||||||||||||||| |||| |    
T  1565495 ggattgacttacttctgagcttatgaaaca--gcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatgaaaaaaata 1565398  T
Q  106 gcttatgaagatacaaatttcgttagtgag 135  Q
     | ||||||||||||| ||||| |||||||    
T  1565397 acatatgaagatacaattttcgctagtgag 1565368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 39941447 - 39941509
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 104  Q
    |||||||||||||  ||||||||||| |||||||||| | |||||  ||||||||||||||||    
T  39941447 tatgcaaataaatgaacttttatgtattattcataagcttgtcaaaatagtttatgaaaaaac 39941509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 42591370 - 42591480
Alignment:
Q  24 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaat 123  Q
    ||||||| |||||  |||| | ||| ||||||  ||||||  || |||| ||||||| || |||||| |||||||||||| || |||||||||||||  |    
T  42591370 agcttatacaaaacagcttgtacaagtaaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagatacactt 42591469  T
Q  124 ttcgttagtga 134  Q
    |||||||||||    
T  42591470 ttcgttagtga 42591480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 22103114 - 22103205
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  || ||||||| |||||| ||||||||||    
T  22103114 gcttatgtaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaatgag-ttatgaaaatacaattttcgttagt 22103205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 25485733 - 25485846
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    |||| ||||| |||||  ||||||||||||||||| | |||||| |  ||||||| |  |  | |||||||||||||||||||||  ||||||||||| |    
T  25485733 ttgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaa 25485832  T
Q  121 aatttcgttagtga 134  Q
    | ||||| ||||||    
T  25485833 attttcgctagtga 25485846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 28122619 - 28122712
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||||   ||||||| || ||||||| || |  | ||||||||||||||||||| | ||||| |||||| || ||||||||||    
T  28122619 gcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagt 28122712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 36259372 - 36259283
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    ||||| ||||||||| | ||||||||| ||||| ||| || || |  ||||||||||||||||||| |||| || |||||| ||||||||    
T  36259372 ttatgtaaataaataaatttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaattttcgtta 36259283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 14461075 - 14461027
Alignment:
Q  88 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||||| |||| ||||||||| |||| |||||||||    
T  14461075 gtagtttatgaaaaaacagtttataaagatacaattttcattagtgaga 14461027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 35282686 - 35282598
Alignment:
Q  30 tgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||||  |||||||||||||||||  | ||||| || |||| ||||    || ||||||||||||||||||||| ||||||||||||    
T  35282686 tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagata 35282598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 1683947 - 1683892
Alignment:
Q  76 aagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 131  Q
    ||||| ||||||||||||||||||||||||| |||| ||  ||||| |||||||||    
T  1683947 aagtttgtcaaggtagtttatgaaaaaacagtttataaaactacaattttcgttag 1683892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 26435089 - 26435148
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| ||| |||||||| ||||  | |||||||||||||||||||| |||||    
T  26435089 ggattgacttatttttaagcttatgaaaaatagtttatgcaaataaatagacttatatgt 26435148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 28690176 - 28690117
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||| | |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  28690176 ggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 34265596 - 34265663
Alignment:
Q  63 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    ||||| |||| |||| || || ||||||||||||||||||||| |||||||| | |||||||| ||||    
T  34265596 atgtattatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatagacaaattttgtta 34265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 35897533 - 35897592
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||||||||| ||||| |||||| ||||  ||||||| ||||||||| ||||||||||    
T  35897533 ggattgacttatttttgaacttatgaaaaatagcttatgtaaataaataaacttttatgt 35897592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 47413544 - 47413485
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    |||||| ||||| |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  47413544 ggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 47413485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 391139 - 391225
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagt 92  Q
    |||||| ||||| |||||| ||||||||||  |||||||||||||||| ||  |||||| || |||||||||| | ||||| |||||    
T  391139 ggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 6900683 - 6900625
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 65  Q
    |||||||||||  |||||| ||||||||||   |||||||||||||||| |||||||||    
T  6900683 ggattgacttacttttgagattatgcaaaacgacttatgcaaataaatacacttttatg 6900625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 19284907 - 19284996
Alignment:
Q  47 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa--cagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||||  || ||||||| |||| ||||||| || ||| || ||||| ||||||  ||| |||||||||||||| ||||||||||||    
T  19284907 aaataaataagctattatgtattatttataagtttgttaagatattttataaaaaaaaacagtttatgaagatacaattttcgttagtga 19284996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 29333444 - 29333510
Alignment:
Q  63 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 129  Q
    ||||| |||| ||||||| || ||| ||| ||||||||||||| |||||||| |||||| |||||||    
T  29333444 atgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatacaattttcgtt 29333510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 41130017 - 41130091
Alignment:
Q  59 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtg 133  Q
    ||||||||| |||||||||| |  || |||| |||||||  |||||| ||||||||||||||| |||| ||||||    
T  41130017 ttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaattttcattagtg 41130091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 46501082 - 46500988
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaattt-cgttagtga 134  Q
    ||||| ||||||||   ||||| |||| |||| ||||| | ||||  |||||||||||||||| || |||||||||||||| ||| |||||||||    
T  46501082 ttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaattttccgttagtga 46500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 4068177 - 4068218
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||| ||||||||||||| |||||||||| ||||||||    
T  4068177 aaaaaacaacttatgaagatactattttcgttagtgagaact 4068218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 15515371 - 15515330
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||| ||||||||||||||| |||||||||| ||||||||    
T  15515371 aaaaaagagcttatgaagatacaattttcgttagtgagaact 15515330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 16708802 - 16708895
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    ||||||||||||||| | |  || |||||||||| |||| |  || ||||| |||||||||||||||  ||||||| |||||| |||| |||||    
T  16708802 gcttatgcaaataaagaaatattaatgtactatttataaatctgttaaggttgtttatgaaaaaacaatttatgaatatacaattttcattagt 16708895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 23369332 - 23369392
Alignment:
Q  74 ataagttggtcaaggtagtttatgaaaaaa--cagcttatgaagatacaaatttcgttagt 132  Q
    ||||||| ||||| ||||||||||||||||  ||| ||||||||||| || ||||||||||    
T  23369332 ataagtttgtcaaagtagtttatgaaaaaaaacagtttatgaagatataactttcgttagt 23369392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 35590192 - 35590233
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||| | ||||||||    
T  35590192 aaaaaacagcttatgaagatacaattttcgtcagtgagaact 35590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 37329436 - 37329395
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||  ||||||||    
T  37329436 aaaaaacagcttatgaagatacaattttcgttggtgagaact 37329395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 45267528 - 45267569
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    |||||||||||||||||||||| |||||||||| | ||||||    
T  45267528 aaaaaacagcttatgaagatacaattttcgttagtaagaact 45267569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 35897738 - 35897646
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    ||||||| |||| ||| || ||||||||||   ||||||||||||||||   |||||| || |||||||||| |  |||| ||||||||||||    
T  35897738 ggattgatttatttttaaggttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 38781130 - 38781178
Alignment:
Q  88 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||| ||||||||||||  |||| ||| ||||||||||    
T  38781130 gtagtttatgaaaaatcagcttatgaagccacaattttggttagtgaga 38781178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 41196624 - 41196672
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 55  Q
    |||||| ||||| |||||||||||| ||||  |||||||||||||||||    
T  41196624 ggattggcttatttttgagcttatgtaaaatagcttatgcaaataaata 41196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 51409790 - 51409730
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    |||||||||||||||||   || |||||| |||||||||||| || || ||||||||||||    
T  51409790 gcttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaa 51409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 97314 - 97195
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| ||| ||||| || ||||  |||||||||||||||||  || ||||||| |||||||||| | ||||||||||||||||||||||||||||||      
T  97314 cttattttttagcttgtgtaaaatagcttatgcaaataaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttat-- 97217  T
Q  114 agatacaaatttcgttagtgaga 136  Q
     ||||||| ||||||||||||||    
T  97216 -gatacaattttcgttagtgaga 97195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 2255719 - 2255834
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||   |||||||||||||||   ||||||||||  ||||||||| | || |||||| |||||||||||||||||||||||||||||    
T  2255719 ttgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagataca 2255818  T
Q  121 aatttcgttagtgaga 136  Q
    | ||| | ||||||||    
T  2255819 atttttggtagtgaga 2255834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 25430878 - 25430745
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaaca 105  Q
    |||||||||||| |||||||||||| ||||  |||||| ||||||||||  | ||||||   |||||||||| | |||||||||||||||| ||||||||    
T  25430878 ggattgacttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatg---tattcataagcttgtcaaggtagtttatgaaaaaaaca 25430782  T
Q  106 gcttatgaagatacaaatttcgttagtgagacattatg 143  Q
    |||||||||||||| ||||| || ||||||| ||||||    
T  25430781 gcttatgaagatac-aattttgtcagtgagaaattatg 25430745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 2027259 - 2027166
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||||  |||||||| | |||||| ||||| ||||||  |||||||||||||||||||||||||||||||| ||| ||||||    
T  2027259 gcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagt 2027166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 2034312 - 2034223
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 128  Q
    |||||||||||||||||  |||||||||| |||| ||||||| |||||||||||||||||||||||| ||||  ||||||||| ||||||    
T  2034312 gcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgt 2034223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 6758612 - 6758727
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||   ||||||||||||||||  ||||| | || ||| |||||| | || ||||||||||||||||||  | ||||| ||||||||    
T  6758612 ttgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagataca 6758711  T
Q  121 aatttcgttagtgaga 136  Q
    ||||||||||||||||    
T  6758712 aatttcgttagtgaga 6758727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 6776811 - 6776908
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||  ||||||| || ||| |||||| | || ||||||||||||| ||||| | |||||||||||||||||||| |||||||||    
T  6776811 gcttatgcaaataaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaaatttcattagtgaga 6776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 7267778 - 7267875
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||| |||||  |||||||||| |||||||||| | | |||||||||||||||||||||| ||||||||| ||||| ||||| | ||||||    
T  7267778 gcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaattttcgctggtgaga 7267875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 21025310 - 21025214
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 135  Q
    |||||||||||||||||  |||||||||| ||| |||||| | || ||||||||||||||||||| ||| |||||||||||||  ||||||| ||||    
T  21025310 gcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaatgttcgttactgag 21025214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 8014791 - 8014886
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||||||||||| ||  |||||||  | |||||||||| | ||||||||||||||||||||||| || ||||||||||||| ||| ||||||||    
T  8014791 gcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggttagtga 8014886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 24625857 - 24625936
Alignment:
Q  42 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    ||||||||||||||  |||||||||| |||||||||| | || ||||||||||||||||||  |||||||||||||||||    
T  24625857 tatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaattagcttatgaagatacaa 24625936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 29623578 - 29623463
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 120  Q
    ||||||||||||||||   ||||||||||||||||  ||||||| || |||| || |||| || || |||||||||||||||||| |||||||| ||| |    
T  29623578 ttgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaa 29623479  T
Q  121 aatttcgttagtgaga 136  Q
      ||||||||||||||    
T  29623478 gttttcgttagtgaga 29623463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 21891453 - 21891331
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||||| | || |||||||||||||| ||  |||||||||||||||||   ||| || || |||||||||| | ||||| ||||||||||||| ||||     
T  21891453 ggattgattaatttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaa 21891354  T
Q  107 cttatgaagatacaaatttcgtt 129  Q
    |||||||||||| || |||||||    
T  21891353 cttatgaagatagaattttcgtt 21891331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 30533964 - 30534046
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 102  Q
    ||||||||| |||||||  |||||||||||||||||  |||||||||| |||||||||||| || || |||||||||||||||    
T  30533964 tttgagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 17914917 - 17915041
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 106  Q
    ||||| |||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||||  |    
T  17914917 ggattaacttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttatgaaaaaatgg 17915015  T
Q  107 cttatgaagatacaaatttcgttagt 132  Q
     ||||||| |||||| ||||||||||    
T  17915016 gttatgaaaatacaattttcgttagt 17915041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 29052336 - 29052433
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| |||| ||||| ||||||||||| |||| ||||||| || |||||| ||||||||||||||| |||||| ||||||| | ||||| ||||||    
T  29052336 gcttatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtttgtgaga 29052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 3211109 - 3210982
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-----aaaaaacagct 108  Q
    ||||| ||| ||||| |||||||  |||||||||||||||||  |||||||||| || | ||||| | ||||| ||||||||||     |||||||||||    
T  3211109 cttattttttagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaaaaaaaacagct 3211010  T
Q  109 tatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||| |||| ||| |||||    
T  3211009 tatgaagatacaattttcattaatgaga 3210982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 10873970 - 10874082
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||| ||||||||||  ||||||||| |||||||  ||||||| |  |||| ||||| | || |||||||||||||| ||||||||||||||||||||    
T  10873970 tttgagattatgcaaaatagcttatgcatataaataagcttttatat--tattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatac 10874067  T
Q  120 aaatttcgttagtga 134  Q
    || ||| ||| ||||    
T  10874068 aattttagttggtga 10874082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 1240693 - 1240596
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| ||||||||||  |||||||||| |||||||||| | ||||||||| |||| ||||||| || ||||||||||||| | |||| |||||||||    
T  1240693 cttattcaaataaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaaacaacttatgaagatacgattttcattagtgaga 1240596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 10687279 - 10687410
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact---attcataagttggtcaaggtagtttatgaaaaaac 104  Q
    ||||||| ||| ||||||||||| |||||  |||||||||||||||||  |||| ||||| |   |||||||||    | ||||||||||||| ||||||    
T  10687279 gattgacgtatttttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaac 10687378  T
Q  105 agcttatgaagatacaaatttcgttagtgaga 136  Q
    | |||||| |||||||| ||||||||| ||||    
T  10687379 aacttatggagatacaattttcgttagcgaga 10687410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 32675971 - 32675875
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataag-ttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  ||||||| || |||||||||| || || ||||| ||||||||||||| | ||||||||||||||| |||| |||||||||    
T  32675971 cttatgcaaataaataagcttttatttattattcataagcttcgt-aaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgaga 32675875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 34801132 - 34801036
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||| ||||||||| |||||||| || ||||||||||||||| ||| ||||||||||||||||| | || | |||||||| |||  |||||||||    
T  34801132 gcttatgtaaataaataaacttttatttattattcataagttggt-aagatagtttatgaaaaaacaacctacggagatacaattttaattagtgaga 34801036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 10054384 - 10054448
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    |||||||||||||||||  |||||||||| |||||||||||| || || ||||||||||||||||    
T  10054384 gcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaa 10054448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 32165295 - 32165247
Alignment:
Q  88 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  32165295 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 32165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 10619202 - 10619314
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||||||||| || ||||||||| |||   ||||||||||||||||  |  || ||||| ||||  |||||| || ||||||||||||||||||||| ||    
T  10619202 attgacttattttagagcttatgtaaagcagcttatgcaaataaatgca--ttaatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaact 10619299  T
Q  109 tatgaagatacaaat 123  Q
    |||||| ||||||||    
T  10619300 tatgaatatacaaat 10619314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 10755363 - 10755288
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 114  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||  ||||||||||| ||||||||||    
T  10755363 gcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa 10755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 16589756 - 16589851
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| ||||||||  | ||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||||||||  | |||||||| |||||    
T  16589756 ttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgaga 16589851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 16605624 - 16605529
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||| ||||||||  | ||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||||||||  | |||||||| |||||    
T  16605624 ttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgaga 16605529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 21871365 - 21871271
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 135  Q
    ||||||||||||| || ||||||||||| |||| |||| ||| |||||||||||||||| |||  ||||||||| |||  || |||||||||||||    
T  21871365 cttatgcaaataagtaaacttttatgtattattgataacttg-tcaaggtagtttatgagaaagtagcttatgatgatttaattttcgttagtgag 21871271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 3830021 - 3829923
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||||||||| ||||  |||||||||||||||||  ||||||| |  |||||||||  |  | | ||||||||||||||||||| ||||||||||||    
T  3830021 tttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagata 3829923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 6632637 - 6632738
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || |||||||| |||||   ||||||||||||||||  |||||||||| |||| ||||  | || || |||||||||||||||||| |||||||    
T  6632637 cttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaacttatga 6632736  T
Q  114 ag 115  Q
    ||    
T  6632737 ag 6632738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 9894744 - 9894833
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    ||||| || |||||||| |||||  ||||| |||||||||||  |||||||||| |||| ||||||| || |||||| ||||||||||||    
T  9894744 cttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatgaaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 21610148 - 21610039
Alignment:
Q  23 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 122  Q
    ||||||||||||||  |||||||||||||||||    |||||| | |||| ||||| | || || |||||||||||||||| || ||||||| ||| ||     
T  21610148 gagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataat 21610049  T
Q  123 tttcgttagt 132  Q
    ||||||||||    
T  21610048 tttcgttagt 21610039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 32615497 - 32615401
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||||   ||||||||| |||| |||| ||  | ||||||||| ||||||||||   |||||||||||||| ||||||||||||||    
T  32615497 gcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagttgatgaaaaaactatttatgaagatacaattttcgttagtgaga 32615401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 4808550 - 4808667
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 112  Q
    ||||| || ||||||||  ||||  |||||||||||||||| || |||| ||||| |||| |||||||  | ||| |||||||||||||||||| |||||    
T  4808550 cttattttagagcttatataaaacagcttatgcaaataaat-gagttttcatgtattatttataagttttt-aagatagtttatgaaaaaacagtttatg 4808647  T
Q  113 aagatacaaatttcgttagt 132  Q
    |||||||||  |||||||||    
T  4808648 aagatacaatattcgttagt 4808667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 6958649 - 6958724
Alignment:
Q  61 ttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||  ||||||||| |  |||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattttctttagtgaga 6958724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 10184437 - 10184320
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  ||||||| |||||||||   |||||| || |||| |||||||  | |||||||||||||||||||||  ||||||    
T  10184437 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaacaatttatga 10184339  T
Q  114 agatacaaatttcgttagt 132  Q
    ||| |||| ||||||||||    
T  10184338 agaaacaattttcgttagt 10184320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 13429488 - 13429545
Alignment:
Q  69 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 126  Q
    |||||||||| | ||||| ||||||||||||||||||| |||||| ||||||| ||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattttc 13429545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 23239231 - 23239347
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    |||||||||||| ||||   ||||| ||||||||||  ||||||| || |||||||||| | || || || |||||| ||||| ||  |||||| |||||    
T  23239231 tttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgatac 23239330  T
Q  120 aaatttcgttagtgaga 136  Q
    || |||| |||||||||    
T  23239331 aactttccttagtgaga 23239347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 34509934 - 34509994
Alignment:
Q  58 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 118  Q
    |||||||||| |||||||||||| ||||| | ||||||||| |||| || |||||||||||    
T  34509934 cttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagata 34509994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 9202438 - 9202387
Alignment:
Q  83 tcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    |||||| |||||||||||||||||| ||||||||||||| |||  |||||||    
T  9202438 tcaaggcagtttatgaaaaaacagcatatgaagatacaatttttattagtga 9202387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 34413331 - 34413417
Alignment:
Q  47 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 134  Q
    ||||||||||| ||||||||| |||| ||||||| || || ||||||||||||||||||  |||| || |||||| |||  |||||||    
T  34413331 aaataaataga-ttttatgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaattttatttagtga 34413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 1468154 - 1468270
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| ||| |||  | ||||||||||||| |||||||| ||||||    
T  1468154 cttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataggtt-tttaaggtagtttatg-aaaaacagtttatga 1468251  T
Q  114 agatacaaatttcgttagt 132  Q
    ||| || | ||||||||||    
T  1468252 agaaaccattttcgttagt 1468270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 2040287 - 2040209
Alignment:
Q  21 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 99  Q
    ||||||||||||||||   |||||  |||||||||  ||||||| || |||||||||||| || |||||| ||||||||    
T  2040287 ttgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 12817174 - 12817116
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 98  Q
    ||||||||||||||||  |||| ||||| |||||||||| | ||||| |||||||||||    
T  12817174 cttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 4272387 - 4272476
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 130  Q
    |||||||||||||||   ||||||||| ||| ||||||||  | || ||||||||| ||||||||  |||| |||| |||| ||||||||    
T  4272387 ttatgcaaataaataactttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattttcgtta 4272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 16589813 - 16589854
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  16589813 aaaaaacaatttatgaagatatgattttcgttattgagaact 16589854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 16605567 - 16605526
Alignment:
Q  200 aaaaaacagcttatgaagatacgattttcgttattgagaact 241  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  16605567 aaaaaacaatttatgaagatatgattttcgttattgagaact 16605526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 6752809 - 6752861
Alignment:
Q  26 cttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 78  Q
    |||||||||||| ||||||| ||||||||| | |||||| || ||||||||||    
T  6752809 cttatgcaaaaaagcttatgtaaataaataaatttttatttattattcataag 6752861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 24733 - 24847
Alignment:
Q  24 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaa--ggtagtttatgaaaaaacagcttatgaagatacaa 121  Q
    |||||| ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||  |||||||||||||||||||||| || |||||||||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 24832  T
Q  122 atttcgttagtgaga 136  Q
      ||| |||||||||    
T  24833 tattcattagtgaga 24847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 13779 - 13868
Alignment:
Q  245 gttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgacaaactaagtggagatgg 335  Q
    |||||||||||||| || || |||||||| ||||||||||||| ||||| |||| || |||||||||||||||| ||||||||||||||||    
T  13779 gttagaatggaacagtagtaaggctttccgagaagattatgagaagaagattctacaatcattagagagacgac-aactaagtggagatgg 13868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 58970 - 58856
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 119  Q
    ||||||||||||||||||  ||| || ||||||||| || |||||||| ||||| |||||| ||||| |||||||||||||||  |  ||||||||||||    
T  58970 tttgagcttatgcaaaaaaccttgtggaaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatac 58871  T
Q  120 aaatttcgttagtga 134  Q
    || || |||||||||    
T  58870 aatttccgttagtga 58856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 24496 - 24379
Alignment:
Q  14 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 113  Q
    |||| |||||||||| | |||||  |||||||||||||||||| ||| |||||| |||||||||| | |||||||||||| || ||| |||| |||| ||    
T  24496 cttacctttgagcttctacaaaacagcttatgcaaataaatag-cttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacga 24398  T
Q  114 agatacaaatttcgttagt 132  Q
    ||||| || ||||||||||    
T  24397 agatataattttcgttagt 24379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 43918 - 43835
Alignment:
Q  20 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 103  Q
    ||||||||||| |||||  || ||||||||||||||   ||||||||| |||||| ||| | ||| ||||||||||| ||||||    
T  43918 tttgagcttatacaaaacagcatatgcaaataaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaa 43835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 14829 - 14732
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||| ||||||||||  |||||||||| ||||||||||||  | || ||||||||||||||| ||| |||| || |||||| ||||||||||||||    
T  14829 gcttatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgaga 14732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 1062 - 1158
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  ||||||| || ||| |||||| | || |||||| |||||| ||||| | |||||||||||||||||||| |||||||||    
T  1062 cttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatttcattagtgaga 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 178471 - 178597
Alignment:
Q  7 ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaaca 105  Q
    ||||| |||||| ||||| ||||| | |||   ||||||||||||||||  |||||||||| |||| |||||||  | |||||| |||||| |||||| |    
T  178471 ggattaacttatttttgaacttatactaaacaacttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaata 178570  T
Q  106 gcttatgaagatacaaatttcgttagt 132  Q
    | |||||||||||||| ||||||||||    
T  178571 gtttatgaagatacaattttcgttagt 178597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 227709 - 227803
Alignment:
Q  39 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||| ||||||||  | || ||||| |||| ||||||| || ||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  227709 gcttatgcgaataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgttagt 227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 242720 - 242626
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||||||   ||||||||| |||  |||||||  ||||| || |||||| |||||||| |||||||||||| | ||||||||| ||||    
T  242720 ttatgcaaataaataagtttttatgtattatatataagttt-tcaagctattttatggaaaaacaggttatgaagatacgattttcgttagcgaga 242626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 109073 - 108984
Alignment:
Q  41 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 132  Q
    |||||||||||||||  | |||||||| || ||||||| | |||||||| ||||||||||||  | ||||||||||||||| ||||||||||    
T  109073 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgttagt 108984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 279073 - 278978
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    |||||||||||| ||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   |||| ||||||||||||| ||||||||||    
T  279073 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttataaagatacaaattttgttagtgaga 278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 1267 - 1390
Alignment:
Q  9 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 108  Q
    |||||||||| || ||||||||||||||   ||||||||||| ||||    || || || |||| ||||||| || |||||||||||||||||||||  |    
T  1267 attgacttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatgaaaaaacaagt 1366  T
Q  109 tatgaagatacaaatttcgttagt 132  Q
    ||| || |||||| ||||||||||    
T  1367 tataaatatacaattttcgttagt 1390  T

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Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 11382 - 11286
Alignment:
Q  40 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 136  Q
    ||||||||||||||||  ||||||| || ||| ||| || | || |||||| |||||| ||||| | |||||||||||||| ||||| |||||||||    
T  11382 cttatgcaaataaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagatacatatttcattagtgaga 11286  T

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Target: scaffold0512 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 4076 - 4161
Alignment:
Q  47 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtg 133  Q
    |||||||||  |||| ||||| |||| ||||| | || ||| ||||||||||||||| |||||||| | |||||| |||||||||||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgttagtg 4161  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 48543 - 48601
Alignment:
Q  8 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 66  Q
    ||||||||||| ||| ||||||| |||||  |||||||||||||||||  |||||||||    
T  48543 gattgacttattttttagcttatacaaaatagcttatgcaaataaataagcttttatgt 48601  T

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