View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19828_low_42 (Length: 311)
Name: NF19828_low_42
Description: NF19828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19828_low_42 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 36570267 - 36570546
Alignment:
| Q |
17 |
atgattaatcattatatgttaattatcttaatattaattattttgtgaaatgattaatatcagtaccaattaattagtttaaatggaaaggaaaaannnn |
116 |
Q |
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| T |
36570267 |
atgattaatcattatatgttaattatcttaatattaattattttgtgaaatgattaatatcagtaccaattaattagtttaaatggaaaggaaaaatttt |
36570366 |
T |
|
| Q |
117 |
nnnnnnnnnnnnnnnnnatgttggaacatttgctaggagagtgactggatacaaaacatatatagctgttagccagatatatatccaactttctttgact |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36570367 |
ctttcttttttccttttatgttggaacatttgctaggagagtgactggatacaaaacatatatagctgttagccagatatatatccaactttctttgact |
36570466 |
T |
|
| Q |
217 |
ttgtcctcatatgtatgtataaaacctattaacccttctgatctaataannnnnnnctaagcaaaatttattaatttaag |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
36570467 |
ttgtcctcatatgtatgtataaaacctattaacccttctgatctaataatttttttctaagcaaaatttattaatttaag |
36570546 |
T |
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