View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19829_high_23 (Length: 347)

Name: NF19829_high_23
Description: NF19829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19829_high_23
NF19829_high_23
[»] chr7 (46 HSPs)
chr7 (4-196)||(9625111-9625303)
chr7 (196-323)||(9623234-9623361)
chr7 (197-305)||(6719067-6719176)
chr7 (197-309)||(42515584-42515697)
chr7 (197-324)||(9124984-9125112)
chr7 (197-310)||(2465772-2465886)
chr7 (197-305)||(2941750-2941859)
chr7 (197-305)||(13125129-13125238)
chr7 (197-318)||(2193287-2193409)
chr7 (197-305)||(2465968-2466077)
chr7 (197-305)||(28495898-28496007)
chr7 (197-305)||(34405584-34405693)
chr7 (197-305)||(36422296-36422405)
chr7 (197-325)||(42515116-42515245)
chr7 (196-322)||(35474113-35474240)
chr7 (197-285)||(2189208-2189297)
chr7 (197-309)||(2611645-2611758)
chr7 (201-285)||(11517386-11517471)
chr7 (197-285)||(46425805-46425894)
chr7 (196-326)||(26421752-26421883)
chr7 (196-285)||(18833350-18833440)
chr7 (196-309)||(25182401-25182515)
chr7 (214-319)||(31743834-31743940)
chr7 (197-309)||(6747591-6747704)
chr7 (197-325)||(28495601-28495730)
chr7 (189-284)||(26421290-26421386)
chr7 (196-323)||(29357448-29357576)
chr7 (197-285)||(679881-679969)
chr7 (197-259)||(13122498-13122561)
chr7 (196-309)||(36015403-36015517)
chr7 (197-284)||(31406577-31406665)
chr7 (200-285)||(35527117-35527203)
chr7 (197-253)||(7646471-7646528)
chr7 (196-300)||(22529227-22529332)
chr7 (197-283)||(5406581-5406668)
chr7 (197-283)||(16192385-16192472)
chr7 (196-277)||(7461343-7461424)
chr7 (197-236)||(43776283-43776322)
chr7 (197-250)||(7646514-7646568)
chr7 (235-285)||(29039052-29039102)
chr7 (196-320)||(33316757-33316877)
chr7 (239-284)||(43233478-43233523)
chr7 (200-299)||(11372501-11372601)
chr7 (202-309)||(20966091-20966199)
chr7 (269-309)||(16811912-16811952)
chr7 (249-285)||(26957603-26957639)
[»] chr4 (55 HSPs)
chr4 (4-196)||(13611943-13612135)
chr4 (196-323)||(13613884-13614011)
chr4 (197-325)||(12691986-12692115)
chr4 (197-309)||(44471312-44471425)
chr4 (196-311)||(49998674-49998790)
chr4 (196-309)||(50398979-50399093)
chr4 (197-305)||(50398525-50398634)
chr4 (196-299)||(21220317-21220421)
chr4 (197-305)||(35871672-35871780)
chr4 (197-325)||(24629420-24629549)
chr4 (197-283)||(50814812-50814899)
chr4 (204-284)||(4127431-4127512)
chr4 (197-285)||(24628964-24629053)
chr4 (197-305)||(51331268-51331377)
chr4 (201-300)||(7678613-7678713)
chr4 (197-300)||(23942776-23942880)
chr4 (197-285)||(44470862-44470950)
chr4 (197-311)||(4127876-4127991)
chr4 (197-323)||(21067308-21067435)
chr4 (197-305)||(1645736-1645845)
chr4 (197-305)||(23350270-23350379)
chr4 (196-309)||(29628654-29628767)
chr4 (201-305)||(53996106-53996211)
chr4 (197-285)||(27026567-27026655)
chr4 (201-282)||(4185782-4185864)
chr4 (196-325)||(14351819-14351949)
chr4 (201-325)||(9423849-9423974)
chr4 (197-305)||(14571708-14571817)
chr4 (197-284)||(1464212-1464300)
chr4 (201-284)||(27029342-27029426)
chr4 (197-324)||(31817839-31817967)
chr4 (197-271)||(15306078-15306153)
chr4 (207-285)||(14572148-14572226)
chr4 (196-324)||(31817384-31817513)
chr4 (197-284)||(23943229-23943317)
chr4 (200-282)||(23091501-23091584)
chr4 (197-305)||(3169250-3169359)
chr4 (235-309)||(8467826-8467900)
chr4 (192-285)||(17628575-17628669)
chr4 (202-283)||(52048659-52048740)
chr4 (197-280)||(33764929-33765013)
chr4 (197-323)||(21067760-21067884)
chr4 (197-283)||(27578444-27578531)
chr4 (246-309)||(53391927-53391990)
chr4 (197-285)||(20306151-20306237)
chr4 (235-284)||(41869983-41870032)
chr4 (201-276)||(17029403-17029479)
chr4 (211-282)||(24271552-24271623)
chr4 (235-283)||(23976245-23976293)
chr4 (196-282)||(42838690-42838780)
chr4 (202-292)||(4186224-4186315)
chr4 (235-298)||(43928989-43929052)
chr4 (197-234)||(11828472-11828509)
chr4 (202-286)||(34554492-34554577)
chr4 (197-284)||(27578896-27578984)
[»] chr5 (39 HSPs)
chr5 (196-325)||(3886593-3886723)
chr5 (197-322)||(2473986-2474112)
chr5 (197-325)||(17445448-17445577)
chr5 (200-325)||(189092-189218)
chr5 (197-322)||(1821933-1822059)
chr5 (197-318)||(8642027-8642149)
chr5 (192-325)||(22556560-22556694)
chr5 (197-305)||(2193860-2193969)
chr5 (197-305)||(34371656-34371765)
chr5 (197-305)||(34372112-34372221)
chr5 (197-325)||(34867814-34867943)
chr5 (197-305)||(2474449-2474558)
chr5 (197-309)||(10927396-10927509)
chr5 (201-325)||(21886143-21886268)
chr5 (192-324)||(22556994-22557127)
chr5 (197-284)||(42788639-42788727)
chr5 (197-325)||(10926939-10927068)
chr5 (201-285)||(20039472-20039556)
chr5 (197-300)||(27646828-27646932)
chr5 (197-284)||(39147004-39147092)
chr5 (197-305)||(3887050-3887159)
chr5 (197-325)||(8391315-8391443)
chr5 (200-285)||(18304495-18304581)
chr5 (196-262)||(29680099-29680166)
chr5 (199-284)||(4673466-4673552)
chr5 (197-286)||(15513005-15513094)
chr5 (201-285)||(20858538-20858623)
chr5 (197-285)||(30684549-30684638)
chr5 (197-285)||(30719798-30719887)
chr5 (209-300)||(18750201-18750293)
chr5 (197-259)||(11757274-11757337)
chr5 (197-299)||(24182239-24182341)
chr5 (203-283)||(4657992-4658073)
chr5 (235-300)||(42429194-42429259)
chr5 (235-306)||(16370740-16370811)
chr5 (243-284)||(2058696-2058737)
chr5 (235-284)||(5066923-5066972)
chr5 (197-285)||(32574651-32574740)
chr5 (235-284)||(43356652-43356701)
[»] scaffold0499 (1 HSPs)
scaffold0499 (197-325)||(2044-2173)
[»] chr1 (39 HSPs)
chr1 (197-325)||(20845654-20845783)
chr1 (197-325)||(20054073-20054202)
chr1 (197-325)||(20054529-20054658)
chr1 (197-325)||(20054985-20055114)
chr1 (197-325)||(20055441-20055570)
chr1 (197-325)||(20055897-20056026)
chr1 (197-325)||(20056353-20056482)
chr1 (197-325)||(20057256-20057385)
chr1 (201-325)||(20061188-20061313)
chr1 (196-325)||(50002699-50002829)
chr1 (197-325)||(20057712-20057841)
chr1 (197-325)||(38340930-38341059)
chr1 (197-305)||(43057058-43057167)
chr1 (197-309)||(43057516-43057629)
chr1 (197-305)||(52250250-52250359)
chr1 (196-285)||(20056808-20056898)
chr1 (196-324)||(2634949-2635078)
chr1 (197-305)||(16451926-16452035)
chr1 (197-305)||(16461079-16461188)
chr1 (201-285)||(20060337-20060422)
chr1 (197-325)||(35759601-35759730)
chr1 (197-325)||(35760907-35761036)
chr1 (204-324)||(50002285-50002406)
chr1 (197-299)||(51372867-51372970)
chr1 (200-325)||(30872946-30873072)
chr1 (202-305)||(2328359-2328463)
chr1 (197-299)||(46693728-46693831)
chr1 (196-293)||(12883580-12883678)
chr1 (200-284)||(12728056-12728142)
chr1 (198-309)||(31822657-31822769)
chr1 (197-284)||(50003068-50003156)
chr1 (196-285)||(16907298-16907388)
chr1 (197-298)||(23180781-23180883)
chr1 (197-251)||(52250641-52250696)
chr1 (197-251)||(52250978-52251033)
chr1 (201-284)||(16440576-16440660)
chr1 (198-284)||(7548156-7548243)
chr1 (239-283)||(10820658-10820702)
chr1 (217-280)||(31823097-31823161)
[»] chr3 (40 HSPs)
chr3 (197-324)||(31284269-31284397)
chr3 (197-325)||(28561770-28561899)
chr3 (197-306)||(13150547-13150657)
chr3 (201-325)||(39653188-39653313)
chr3 (197-305)||(11180027-11180136)
chr3 (197-305)||(16811425-16811534)
chr3 (197-309)||(50347786-50347899)
chr3 (196-325)||(25239069-25239199)
chr3 (196-309)||(39640977-39641091)
chr3 (197-305)||(13150092-13150201)
chr3 (197-309)||(14813989-14814102)
chr3 (197-305)||(32227544-32227653)
chr3 (197-325)||(41472325-41472453)
chr3 (197-324)||(20885110-20885238)
chr3 (197-299)||(32386727-32386830)
chr3 (197-285)||(8067344-8067433)
chr3 (197-285)||(14820218-14820307)
chr3 (197-325)||(25230241-25230370)
chr3 (197-325)||(25237828-25237957)
chr3 (197-309)||(25238677-25238790)
chr3 (197-285)||(27187323-27187412)
chr3 (197-305)||(32227214-32227323)
chr3 (197-300)||(2911144-2911248)
chr3 (197-284)||(4067353-4067441)
chr3 (200-320)||(7493910-7494031)
chr3 (197-309)||(25230698-25230811)
chr3 (197-309)||(25238285-25238398)
chr3 (197-309)||(30529727-30529840)
chr3 (197-318)||(25248142-25248264)
chr3 (196-281)||(25802540-25802626)
chr3 (200-320)||(7477220-7477341)
chr3 (197-293)||(37045091-37045188)
chr3 (205-284)||(32796936-32797016)
chr3 (197-309)||(29224364-29224477)
chr3 (201-285)||(16810989-16811074)
chr3 (197-284)||(41474062-41474150)
chr3 (202-283)||(26309987-26310069)
chr3 (197-280)||(25802997-25803081)
chr3 (201-284)||(31103955-31104041)
chr3 (239-281)||(3890046-3890088)
[»] chr8 (40 HSPs)
chr8 (197-325)||(10844907-10845036)
chr8 (197-324)||(22026404-22026532)
chr8 (197-325)||(27925923-27926052)
chr8 (197-298)||(12827247-12827349)
chr8 (196-325)||(41659097-41659227)
chr8 (197-309)||(2044098-2044211)
chr8 (197-305)||(10844608-10844717)
chr8 (197-305)||(22548988-22549097)
chr8 (197-285)||(25144836-25144925)
chr8 (197-309)||(25147576-25147689)
chr8 (197-283)||(22548542-22548629)
chr8 (197-309)||(17103121-17103234)
chr8 (197-325)||(32292421-32292550)
chr8 (197-300)||(6464903-6465007)
chr8 (197-323)||(28453364-28453491)
chr8 (197-309)||(12100731-12100844)
chr8 (197-285)||(25148031-25148120)
chr8 (197-285)||(27022331-27022420)
chr8 (197-309)||(34308472-34308585)
chr8 (196-309)||(27819238-27819352)
chr8 (188-325)||(28375038-28375176)
chr8 (197-305)||(8080335-8080444)
chr8 (201-318)||(21316106-21316224)
chr8 (205-309)||(22840530-22840635)
chr8 (197-285)||(41913034-41913123)
chr8 (197-309)||(34308928-34309045)
chr8 (197-318)||(33852251-33852373)
chr8 (202-309)||(15819014-15819121)
chr8 (235-306)||(27021911-27021982)
chr8 (201-271)||(31283648-31283719)
chr8 (196-300)||(15567548-15567653)
chr8 (201-284)||(30527479-30527563)
chr8 (196-309)||(1297047-1297161)
chr8 (200-324)||(3744663-3744788)
chr8 (197-305)||(3745145-3745254)
chr8 (239-283)||(22705238-22705282)
chr8 (200-260)||(25307855-25307914)
chr8 (235-284)||(30334940-30334989)
chr8 (239-284)||(6466775-6466820)
chr8 (239-284)||(15568041-15568086)
[»] chr2 (34 HSPs)
chr2 (197-324)||(41754314-41754442)
chr2 (197-325)||(30966714-30966843)
chr2 (197-305)||(8256570-8256679)
chr2 (197-309)||(11388228-11388340)
chr2 (197-325)||(24818350-24818479)
chr2 (197-325)||(25337990-25338119)
chr2 (197-323)||(16378963-16379090)
chr2 (197-283)||(1912591-1912677)
chr2 (200-309)||(18098874-18098984)
chr2 (196-305)||(33175002-33175112)
chr2 (197-305)||(25434049-25434158)
chr2 (197-285)||(29804746-29804835)
chr2 (197-305)||(30966278-30966387)
chr2 (200-285)||(33771065-33771151)
chr2 (197-285)||(5399810-5399899)
chr2 (197-285)||(33174567-33174656)
chr2 (196-323)||(16379419-16379547)
chr2 (197-306)||(38898905-38899015)
chr2 (197-309)||(11394575-11394686)
chr2 (196-309)||(83057-83171)
chr2 (196-309)||(1707081-1707195)
chr2 (196-325)||(27882918-27883048)
chr2 (197-305)||(29259613-29259722)
chr2 (197-322)||(20502050-20502175)
chr2 (197-284)||(30963713-30963801)
chr2 (235-325)||(1953179-1953269)
chr2 (197-318)||(15619929-15620051)
chr2 (200-284)||(8073957-8074042)
chr2 (203-284)||(13191039-13191121)
chr2 (239-285)||(30963299-30963345)
chr2 (197-284)||(30961876-30961964)
chr2 (235-285)||(15639798-15639848)
chr2 (239-284)||(18447954-18447999)
chr2 (200-237)||(32377712-32377749)
[»] scaffold0020 (1 HSPs)
scaffold0020 (197-305)||(107456-107565)
[»] chr6 (41 HSPs)
chr6 (197-309)||(13492829-13492942)
chr6 (197-309)||(16520008-16520121)
chr6 (197-309)||(20896681-20896794)
chr6 (197-324)||(20850346-20850474)
chr6 (197-323)||(17027524-17027651)
chr6 (197-309)||(6330905-6331018)
chr6 (197-305)||(13191506-13191615)
chr6 (197-285)||(13492396-13492485)
chr6 (203-305)||(7911922-7912025)
chr6 (196-285)||(15929646-15929736)
chr6 (197-325)||(17850942-17851071)
chr6 (197-309)||(20126175-20126288)
chr6 (197-284)||(2681209-2681297)
chr6 (202-305)||(3652530-3652634)
chr6 (210-325)||(27334185-27334301)
chr6 (210-325)||(27394925-27395041)
chr6 (197-309)||(9352102-9352215)
chr6 (197-309)||(11062325-11062438)
chr6 (197-323)||(7912336-7912463)
chr6 (201-285)||(20735759-20735844)
chr6 (201-322)||(2720560-2720683)
chr6 (197-284)||(17731102-17731194)
chr6 (197-285)||(17851438-17851527)
chr6 (197-309)||(21312011-21312124)
chr6 (201-285)||(23986314-23986399)
chr6 (197-323)||(2890832-2890959)
chr6 (216-309)||(31821704-31821798)
chr6 (201-285)||(9440306-9440391)
chr6 (201-285)||(28583027-28583112)
chr6 (198-305)||(23776485-23776592)
chr6 (201-309)||(14771716-14771825)
chr6 (197-305)||(21311559-21311668)
chr6 (196-319)||(9440849-9440973)
chr6 (211-285)||(15929263-15929338)
chr6 (209-283)||(17205405-17205479)
chr6 (197-250)||(28780209-28780263)
chr6 (202-285)||(1991617-1991701)
chr6 (200-285)||(28065831-28065920)
chr6 (239-319)||(32292915-32292995)
chr6 (196-300)||(33774994-33775101)
chr6 (201-285)||(20732642-20732727)
[»] scaffold0243 (1 HSPs)
scaffold0243 (197-305)||(1264-1373)
[»] scaffold0018 (1 HSPs)
scaffold0018 (197-325)||(10324-10453)
[»] scaffold0322 (1 HSPs)
scaffold0322 (197-323)||(18992-19119)
[»] scaffold0047 (2 HSPs)
scaffold0047 (197-284)||(18128-18215)
scaffold0047 (197-305)||(17591-17700)
[»] scaffold0168 (1 HSPs)
scaffold0168 (197-305)||(2786-2895)
[»] scaffold0024 (1 HSPs)
scaffold0024 (197-285)||(105784-105873)
[»] scaffold0040 (1 HSPs)
scaffold0040 (197-318)||(2203-2325)
[»] scaffold0333 (2 HSPs)
scaffold0333 (201-305)||(4605-4710)
scaffold0333 (197-279)||(5091-5174)
[»] scaffold0022 (4 HSPs)
scaffold0022 (197-305)||(162671-162780)
scaffold0022 (203-309)||(69814-69921)
scaffold0022 (197-253)||(163167-163224)
scaffold0022 (197-250)||(163127-163181)
[»] scaffold0002 (1 HSPs)
scaffold0002 (197-305)||(154801-154910)
[»] scaffold0389 (1 HSPs)
scaffold0389 (197-262)||(13526-13592)
[»] scaffold0005 (2 HSPs)
scaffold0005 (197-305)||(245559-245668)
scaffold0005 (207-285)||(245150-245228)
[»] scaffold0007 (1 HSPs)
scaffold0007 (235-325)||(142306-142396)
[»] scaffold0557 (1 HSPs)
scaffold0557 (200-300)||(2154-2255)
[»] scaffold0088 (1 HSPs)
scaffold0088 (237-324)||(23698-23785)
[»] scaffold0664 (1 HSPs)
scaffold0664 (215-323)||(3993-4102)
[»] scaffold0391 (1 HSPs)
scaffold0391 (200-293)||(14797-14891)
[»] scaffold0277 (1 HSPs)
scaffold0277 (197-250)||(14695-14749)
[»] scaffold0036 (1 HSPs)
scaffold0036 (209-285)||(26134-26211)


Alignment Details
Target: chr7 (Bit Score: 181; Significance: 9e-98; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 9625303 - 9625111
Alignment:
Q  4 ctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcggttctctagctgaacttttt 103  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  9625303 ctaacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcggttctctagctgaagttttt 9625204  T
Q  104 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9625203 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 9625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 9623361 - 9623234
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9623361 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 9623262  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    |||||||||||||||||||||| |||||    
T  9623261 ccatggagtctcatgcatgcacaacctc 9623234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 6719067 - 6719176
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |    
T  6719067 cacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttcaa 6719166  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  6719167 ccatgtagtc 6719176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 42515697 - 42515584
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  42515697 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagccttccttcaa 42515598  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  42515597 ccatgtagtctcat 42515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 9125112 - 9124984
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||  |    
T  9125112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctttaa 9125013  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||  |||||||| | |||||| |||||    
T  9125012 ccatacagtctcatacctgcacggcctca 9124984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 310
Target Start/End: Complemental strand, 2465886 - 2465772
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2465886 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465787  T
Q  296 ccatggagtctcatg 310  Q
    ||||| |||| ||||    
T  2465786 ccatgtagtcccatg 2465772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 2941750 - 2941859
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  2941750 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagccttccttcaa 2941849  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  2941850 ccatgcagtc 2941859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 13125129 - 13125238
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  13125129 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 13125228  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  13125229 ccatgcagtc 13125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 2193409 - 2193287
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2193409 cacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2193310  T
Q  296 ccatggagtctcatgcatgcacg 318  Q
    ||||| |||| ||| | ||||||    
T  2193309 ccatgcagtcccatacctgcacg 2193287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 2466077 - 2465968
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2466077 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465978  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  2465977 ccatgtagtc 2465968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 28496007 - 28495898
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | |||| |||||||||||  |||||| |    
T  28496007 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagccttccttcaa 28495908  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  28495907 ccatgtagtc 28495898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 34405584 - 34405693
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  34405584 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagccttccttcaa 34405683  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  34405684 ccatgtagtc 34405693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 36422405 - 36422296
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  36422405 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 36422306  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  36422305 ccatgtagtc 36422296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 42515245 - 42515116
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  42515245 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 42515146  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
     |||| |||||||| | |||||| ||||||    
T  42515145 tcatgcagtctcatacctgcacggcctcag 42515116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 35474113 - 35474240
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || |||  ||||||||||||||||   | ||||     
T  35474113 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagtctttcttca 35474212  T
Q  295 accatggagtctcatgcatgcacgacct 322  Q
    |||||| |||||||| | | ||||||||    
T  35474213 accatgtagtctcatacctacacgacct 35474240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 2189297 - 2189208
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  2189297 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagc 2189208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 2611645 - 2611758
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||| ||||| | ||| ||||||||||||||||||  |||||| |    
T  2611645 cacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagccttccttcca 2611744  T
Q  296 ccatggagtctcat 309  Q
    ||||  ||||||||    
T  2611745 ccatatagtctcat 2611758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 11517386 - 11517471
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  11517386 cttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagc 11517471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 46425894 - 46425805
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||  || ||||||||||||||||||    
T  46425894 cacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagc 46425805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 26421752 - 26421883
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||| ||||||  ||| | |||||||||||| |||  | ||||     
T  26421752 acacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattcttatgagccttacttca 26421851  T
Q  295 accatggagtctcatgcatgcacgacctcagt 326  Q
    |||||| |||||||| |||||||| |||||||    
T  26421852 accatgcagtctcatacatgcacggcctcagt 26421883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 18833440 - 18833350
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||| |||||||    
T  18833440 acacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagc 18833350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 25182515 - 25182401
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| |||||||||| ||||||||| ||||||| ||||||||  |||||| ||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  25182515 acacacttaactgtgaagttcttatggaatgagttaccgaaaataagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 25182416  T
Q  295 accatggagtctcat 309  Q
    |||||| ||||||||    
T  25182415 accatgcagtctcat 25182401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 31743834 - 31743940
Alignment:
Q  214 ttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgca 312  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||| | | | ||||| ||||||||||||| |||||| |||||| ||||||||||     
T  31743834 ttcttatggaatgggctaccgaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatgcagtctcatgct 31743933  T
Q  313 tgcacga 319  Q
    |||||||    
T  31743934 tgcacga 31743940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 6747591 - 6747704
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  6747591 cacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 6747690  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||| ||||    
T  6747691 ccatgtagtatcat 6747704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 28495601 - 28495730
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||   |   |||||||||||||||   |||||| |    
T  28495601 cacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataagtcttccttcaa 28495700  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | | |||||||||||    
T  28495701 ccatgtagtcccatacctacacgacctcag 28495730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 26421290 - 26421386
Alignment:
Q  189 aattcagacacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||| ||||| ||||||||||||||||||| |||||  ||||||||| ||  ||||||||||||||||||||| ||||||| |||||||||||||    
T  26421290 aattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataag 26421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 29357448 - 29357576
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||| ||||||||| |||||||||  || | |||| ||||| ||||||||||||||||||||||| | ||| |||||||||||||||| || ||||||     
T  29357448 acacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatatagttagtaccaaacaattcttataaacattccttca 29357547  T
Q  295 accatggagtctcatgcatgcacgacctc 323  Q
    |||||| |||| ||| | |||||||||||    
T  29357548 accatgcagtcccatacctgcacgacctc 29357576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 679969 - 679881
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||||||||| ||| | ||||||||||||||||    
T  679969 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagta-ccaacaattcttataagc 679881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 13122498 - 13122561
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 259  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13122498 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 309
Target Start/End: Original strand, 36015403 - 36015517
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||| ||||||||| ||||||||| ||||| ||||   ||| ||||| |||||||||||||||| || ||| |||||||||||| |||||  ||||||     
T  36015403 acacgtttaactgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttca 36015502  T
Q  295 accatggagtctcat 309  Q
    |||||||||||||||    
T  36015503 accatggagtctcat 36015517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 31406577 - 31406665
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||||||  || | |||||||||| |||||||||||||||||||||||||   | ||||||||||| |||||    
T  31406577 cacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataag 31406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 35527117 - 35527203
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||| ||| |||||  |||| |||| ||| ||||||||||||||||||||| | | ||||||||||||||||||    
T  35527117 gcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagc 35527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 7646471 - 7646528
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 253  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  7646471 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtt 7646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 22529227 - 22529332
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||| ||||||| |  |||||| ||| |||| |||||||||||||||| |||||| | ||| |||||| |||||||||||  ||||||     
T  22529227 acacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagccttccttca 22529326  T
Q  295 accatg 300  Q
    ||||||    
T  22529327 accatg 22529332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 5406581 - 5406668
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||||||| |  || || ||| |||  ||||||||||||||||||||||||  || ||||||||||||||||    
T  5406581 cacgcttaactgtggagttcttatggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataa 5406668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 16192472 - 16192385
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||| |||||  ||||||||| ||||| |||||| ||| ||||||||||||||||||| |||||  || ||||||||||||||||    
T  16192472 cacgcttcactgtatagttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataa 16192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 7461343 - 7461424
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattc 277  Q
    |||||||||||||| |||||||||| |||||| ||||| ||| ||||||| |||||||| |||||| | ||||||||||||||    
T  7461343 acacgcttaactgtagagttcttat-gaatgaactaccaaaaagaagatgtatcttgtttatatagttagtatcaaacaattc 7461424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 43776283 - 43776322
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaa 236  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43776283 cacgcttaactgtggagttcttatggaatgagctaccgaa 43776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 7646568 - 7646514
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  7646568 cacgcttaactgtggagttcttatggaatgagttaccgaaaacaagatgcatctt 7646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 29039052 - 29039102
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||| |||||    
T  29039052 aaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagc 29039102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 320
Target Start/End: Complemental strand, 33316877 - 33316757
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||| |||| ||||||||||||||||  || ||||||||||  |||  ||||||||||||||| ||  | |||||||||||||||||    |||||| |    
T  33316877 acacgtttaattgtggagttcttatagtttgggctaccgaaa--aga--catcttgttgatataagtattgtcaaacaattcttataatttttccttcaa 33316782  T
Q  296 ccatggagtctcatgcatgcacgac 320  Q
    ||||| |||||||| | ||||||||    
T  33316781 ccatgtagtctcatacctgcacgac 33316757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 43233523 - 43233478
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||    
T  43233523 aagatgcatcttgttgatatagatagtaccaaacaattcttataag 43233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 11372601 - 11372501
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||| |||||||||||| |  ||||||||| |||  || ||||||| ||||| || |||| ||| ||||||||||||||||||  |||||| ||||    
T  11372601 gcttaactttggagttcttatggtttgagctaccaaaaataacatgcatcatgttggtacaggtagtaccaaacaattcttataagccttccttcaacca 11372502  T
Q  299 t 299  Q
    |    
T  11372501 t 11372501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 20966199 - 20966091
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||| ||||||||| ||||||||||||| ||| || || |||||||||| |||||||  ||  ||| ||||||||||||   |||||| | ||||    
T  20966199 ttaactgtgaagttcttatggaatgagctaccgaaaataatatacatcttgttggtataggtattacaaaataattcttataagtcatccttcaatcatg 20966100  T
Q  301 gagtctcat 309  Q
     ||||||||    
T  20966099 cagtctcat 20966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 16811912 - 16811952
Alignment:
Q  269 aaacaattcttataagcactccttctaccatggagtctcat 309  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  16811912 aaacaattcttataagcattccttcaaccatgtagtctcat 16811952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 26957603 - 26957639
Alignment:
Q  249 ttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagc 26957639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 9e-98; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 13611943 - 13612135
Alignment:
Q  4 ctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcggttctctagctgaacttttt 103  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13611943 ctaacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcggttctctagctgaagttttt 13612042  T
Q  104 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612043 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 13612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 13613884 - 13614011
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13613884 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 13613983  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    |||||||||||||||||||||| |||||    
T  13613984 ccatggagtctcatgcatgcacaacctc 13614011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 12691986 - 12692115
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  12691986 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 12692085  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  12692086 ccatgcagtcccatacctgcacggcctcag 12692115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 44471312 - 44471425
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  44471312 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 44471411  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  44471412 ccatgtagtctcat 44471425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 49998790 - 49998674
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  49998790 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 49998691  T
Q  295 accatggagtctcatgc 311  Q
    |||||| |||| |||||    
T  49998690 accatgcagtcccatgc 49998674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 196 - 309
Target Start/End: Original strand, 50398979 - 50399093
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50398979 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagccttccttca 50399078  T
Q  295 accatggagtctcat 309  Q
    |||||| | ||||||    
T  50399079 accatgtaatctcat 50399093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 50398525 - 50398634
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  50398525 cacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 50398624  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  50398625 ccatgtagtc 50398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 21220317 - 21220421
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||     
T  21220317 acacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttca 21220416  T
Q  295 accat 299  Q
    |||||    
T  21220417 accat 21220421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 35871780 - 35871672
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||| |||||||  |||||| ||    
T  35871780 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaaatgcatcttgttgatataggtggtaccaaacaattcatataagccttccttcaac 35871681  T
Q  297 catggagtc 305  Q
    |||| ||||    
T  35871680 catgaagtc 35871672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 24629420 - 24629549
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  |    
T  24629420 cacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattcctttaa 24629519  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | | |||||||||||    
T  24629520 ccatgcagtcccatacctacacgacctcag 24629549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 50814812 - 50814899
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  50814812 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 4127431 - 4127512
Alignment:
Q  204 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 4127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 24628964 - 24629053
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  24628964 cacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 24629053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 51331268 - 51331377
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  51331268 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 51331367  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  51331368 ccatgtagtc 51331377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 7678613 - 7678713
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |||||    
T  7678613 cttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccat 7678712  T
Q  300 g 300  Q
    |    
T  7678713 g 7678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 23942776 - 23942880
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  23942776 cacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 23942875  T
Q  296 ccatg 300  Q
    |||||    
T  23942876 ccatg 23942880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 44470862 - 44470950
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  44470862 cacgcttaactgtggagttcttatggaatgagttacgaacagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 44470950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 311
Target Start/End: Original strand, 4127876 - 4127991
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  4127876 cacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 4127975  T
Q  296 ccatggagtctcatgc 311  Q
    ||||  ||||||||||    
T  4127976 ccatatagtctcatgc 4127991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 21067435 - 21067308
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||| |||| |||| ||   |||||| |    
T  21067435 cacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatatatgtagtaccaaataattattattagtcttccttcaa 21067336  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||||||| |||||||||||||    
T  21067335 ccatgcagtctcatacatgcacgacctc 21067308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 1645736 - 1645845
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||  || |||||||||||||||||   |||||| |    
T  1645736 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagtcttccttcaa 1645835  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  1645836 ccatgtagtc 1645845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 23350270 - 23350379
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  23350270 cacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataagccttccttcaa 23350369  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  23350370 ccatgcagtc 23350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 309
Target Start/End: Original strand, 29628654 - 29628767
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||| ||||| |||||| ||  ||||  |||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  29628654 acacgcttaactgtggagttcttatggaatgggctaccaaacaaagacacatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 29628753  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  29628754 ccatgtagtctcat 29628767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 53996106 - 53996211
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||||    
T  53996106 cttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagcattccttcaaccat 53996205  T
Q  300 ggagtc 305  Q
    | ||||    
T  53996206 gtagtc 53996211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 27026655 - 27026567
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||  | ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  27026655 cacgcttaactacgtagttcttatggaatgggctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagc 27026567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 4185864 - 4185782
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttata 282  Q
    ||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  4185864 cttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttata 4185782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 14351949 - 14351819
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| ||||  | |||| ||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||  ||||||     
T  14351949 acacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagccttccttca 14351850  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    |||||| || ||||| |||||||||||||||    
T  14351849 accatgcagactcatacatgcacgacctcag 14351819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 325
Target Start/End: Original strand, 9423849 - 9423974
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||| |||| | ||||||| ||||| |||||  ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||  || ||| |||||    
T  9423849 cttaattgtgaaattcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttctttcaaccat 9423948  T
Q  300 ggagtctcatgcatgcacgacctcag 325  Q
    | |||| ||| |||||||||||||||    
T  9423949 gcagtcccatacatgcacgacctcag 9423974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 14571708 - 14571817
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  14571708 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 14571807  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  14571808 ccatgaagtc 14571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 1464300 - 1464212
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||| || |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1464300 cacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 1464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 27029426 - 27029342
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| || ||| |||| ||||||||||||    
T  27029426 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataag 27029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 31817839 - 31817967
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || |||||||||  ||||  ||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||||  |||||| |    
T  31817839 cacgcttaactatgaagttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagccttccttcaa 31817938  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||| |||| ||| |||||| |||||||    
T  31817939 ccatgcagtcccatacatgcatgacctca 31817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 15306078 - 15306153
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 271  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  15306078 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaa 15306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 14572148 - 14572226
Alignment:
Q  207 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  14572148 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 14572226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 31817384 - 31817513
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||| ||| |||||||||  ||||| ||| | |||| |||||||||| |||||| ||||||| ||| ||||||||| |||||| |  ||||||     
T  31817384 acacgcttaattgtagagttcttaaggaatgggctgcggaaaagaagatgcattttgttggtataggtagtaccaaacaattattataaacgttccttca 31817483  T
Q  295 accatggagtctcatgcatgcacgacctca 324  Q
    |||||| |||||||| ||||||||||||||    
T  31817484 accatgaagtctcatacatgcacgacctca 31817513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 23943229 - 23943317
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| | || |||||||    
T  23943229 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataag 23943317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 23091501 - 23091584
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttata 282  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| || ||| ||||||||| |||||    
T  23091501 gcttaactgtggagtttttatagaataagctaccagaaagaagatgcatcttgttaatatatgtagtaccaaacaatttttata 23091584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 3169359 - 3169250
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| || || | |||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||   |||||| |    
T  3169359 cacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagtcttccttcaa 3169260  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  3169259 ccatgtagtc 3169250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 8467826 - 8467900
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcat 309  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||   |||||| |||||| ||||||||    
T  8467826 aaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcat 8467900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 17628669 - 17628575
Alignment:
Q  192 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||| |||||| ||||||||| ||||||| |  || |||| ||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  17628669 tcaggcacgctcaactgtggaattcttatgggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagc 17628575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 52048659 - 52048740
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||||||||||||||| ||||||  |||  || ||||||||||||||||  |||| || ||||||||||||||||||||    
T  52048659 ttaactgtggagttcttatggaatgacttacaaaatgaagatgcatcttgttagtatacgtagtatcaaacaattcttataa 52048740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 33765013 - 33764929
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 280  Q
    ||||||||| |||| |||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| | | |||||||||||||    
T  33765013 cacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattctta 33764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 21067884 - 21067760
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||| ||||||||| |||||  ||||| ||| ||  || ||||||||||||||||| | | |||||||||||||||||   |||||| ||    
T  21067884 cacgcttaactgtgaagttcttatggaatggactaccaaaaaaa--tgtatcttgttgatataggtagcaccaaacaattcttataagtcttccttcaac 21067787  T
Q  297 catggagtctcatgcatgcacgacctc 323  Q
    |||| |||| ||| | |||||| ||||    
T  21067786 catgcagtcccatacctgcacggcctc 21067760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 27578444 - 27578531
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||||||| |||||||||||| |  || | |||||||| ||||||||||||||||||||||||| | | |||| |||||||||||    
T  27578444 cacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 53391990 - 53391927
Alignment:
Q  246 atcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcat 309  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | |||| |||||| ||||||||    
T  53391990 atcttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgcagtctcat 53391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 20306151 - 20306237
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| ||| |||||||||  |||| | |||| |||  ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  20306151 cacgcttaaccgtgtagttcttatgaaatgggataccaaaa--agatgcatcttgttgatatagatagtaccaaacaattcttataagc 20306237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 41870032 - 41869983
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  41870032 aaagaagatgcgtcttgttgatataggtagtatcatacaattcttataag 41869983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 17029479 - 17029403
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaatt 276  Q
    |||||||||||||||||||| |||| || |||| |||| || ||||||||||||||||||||| |||  ||||||||    
T  17029479 cttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaatt 17029403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 24271552 - 24271623
Alignment:
Q  211 gagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttata 282  Q
    |||||||||| ||||| |||||| ||| || ||||||||||||  ||||||| |||||||| ||||||||||    
T  24271552 gagttcttatggaatgggctacccaaaaaatatgcatcttgttcgtataggtagtatcaaataattcttata 24271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 23976245 - 23976293
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||  ||||||| ||| ||||||||||||||||    
T  23976245 aaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa 23976293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 42838780 - 42838690
Alignment:
Q  196 acacgcttaactgtgga-gttcttatagaatgagctaccgaaaga---agatgcatcttgttgatataggtggtatcaaacaattcttata 282  Q
    ||||||||||||||| | |||||||| |||||| ||| ||||| |   |||||||| |||||||||||||| ||| ||||||||| |||||    
T  42838780 acacgcttaactgtgaaagttcttatggaatgaactatcgaaaaagaaagatgcattttgttgatataggtagtaccaaacaatttttata 42838690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 4186315 - 4186224
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcctt 292  Q
    ||||||||| |||||||||  |||| |||||| ||| ||||||| |||||||| || ||||| ||| ||||  ||||||||||||| |||||    
T  4186315 ttaactgtgtagttcttatgcaatgggctaccaaaaagaagatgaatcttgttcatgtaggtagtaccaaatcattcttataagcattcctt 4186224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 43928989 - 43929052
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||||||||||||||| |||| || ||| |||||||||||| |||||  |||||| ||||    
T  43928989 aaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagctttccttcgacca 43929052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 11828472 - 11828509
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg 234  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  11828472 cacgcttaactgtggagttcttatggaaggagctaccg 11828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 34554577 - 34554492
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagca 286  Q
    |||||| || ||||||||| |||||  ||||| |||  || |||||||||| || ||||||| || ||||||||||||||||||||    
T  34554577 ttaactatgaagttcttatggaatggtctaccaaaaataaaatgcatcttgctggtataggtagtgtcaaacaattcttataagca 34554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 27578896 - 27578984
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||| ||||||||| ||  | ||||| |||| |||||||  |||  |||||||| || ||| |||||||||||||||||    
T  27578896 cacgcttaactgtgtagttcttatggatagggctactgaaaagaagatgtgtctaattgatatatgtagtaccaaacaattcttataag 27578984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 3886593 - 3886723
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||    
T  3886593 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcattccttct 3886692  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    |||||| |||| ||| | || ||||||||||    
T  3886693 accatgcagtcccatacttgtacgacctcag 3886723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 2474112 - 2473986
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  2474112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagccttccttcaa 2474013  T
Q  296 ccatggagtctcatgcatgcacgacct 322  Q
    ||||| |||||||||| || |||||||    
T  2474012 ccatgcagtctcatgcctgtacgacct 2473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 17445448 - 17445577
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccga-aagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17445448 cacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17445547  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||||| | |||| ||||||    
T  17445548 ccatgtagtcccatgcctacacggcctcag 17445577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 325
Target Start/End: Complemental strand, 189218 - 189092
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| ||||    
T  189218 gcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagccttccttcaacca 189119  T
Q  299 tggagtctcatgcatgcacgacctcag 325  Q
    || |||| ||| |||| ||| ||||||    
T  189118 tgcagtcccatacatgtacggcctcag 189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 1822059 - 1821933
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  1822059 cacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 1821960  T
Q  296 ccatggagtctcatgcatgcacgacct 322  Q
    ||||| |||||||| | ||||||||||    
T  1821959 ccatgcagtctcatacctgcacgacct 1821933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 8642027 - 8642149
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  8642027 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 8642126  T
Q  296 ccatggagtctcatgcatgcacg 318  Q
    ||||| |||| ||| | ||||||    
T  8642127 ccatgcagtcccatacctgcacg 8642149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 192 - 325
Target Start/End: Complemental strand, 22556694 - 22556560
Alignment:
Q  192 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 290  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||  |||    
T  22556694 tcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagccttcc 22556595  T
Q  291 ttctaccatggagtctcatgcatgcacgacctcag 325  Q
    ||| |||||| |||| ||| | |||||| ||||||    
T  22556594 ttcaaccatgcagtcccatacctgcacggcctcag 22556560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 2193969 - 2193860
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2193969 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2193870  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  2193869 ccatgtagtc 2193860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 34371765 - 34371656
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34371765 cacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34371666  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  34371665 ccatgcagtc 34371656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 34372221 - 34372112
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34372221 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34372122  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  34372121 ccatgtagtc 34372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 34867943 - 34867814
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  34867943 cacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 34867844  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  34867843 ccatgcagtcccatacctgcacggcctcag 34867814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 2474558 - 2474449
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||   |||||| |    
T  2474558 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagtcttccttcaa 2474459  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  2474458 ccatgcagtc 2474449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 10927396 - 10927509
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10927396 cacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927495  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  10927496 ccatgtagtctcat 10927509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 201 - 325
Target Start/End: Original strand, 21886143 - 21886268
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||    
T  21886143 cttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccat 21886242  T
Q  300 ggagtctcatgcatgcacgacctcag 325  Q
    | |||| ||| | ||||| |||||||    
T  21886243 gcagtcccatacctgcacaacctcag 21886268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 22557127 - 22556994
Alignment:
Q  192 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 290  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||  |||    
T  22557127 tcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataagccttcc 22557028  T
Q  291 ttctaccatggagtctcatgcatgcacgacctca 324  Q
    ||| |||||| |||| ||| | |||||| |||||    
T  22557027 ttcaaccatgcagtcccatacctgcacggcctca 22556994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 42788639 - 42788727
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  42788639 cacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 42788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 10926939 - 10927068
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| ||||||||||||||||||| |||||  ||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10926939 cacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927038  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | | |||||||||||    
T  10927039 ccatgtagtcccatacctacacgacctcag 10927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 20039472 - 20039556
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  20039472 cttaactgtagagttcttatggaatgggctaccaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagc 20039556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 27646828 - 27646932
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  |||| |||||| ||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||  |||||| |    
T  27646828 cacgcttaactgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaa 27646927  T
Q  296 ccatg 300  Q
    |||||    
T  27646928 ccatg 27646932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 39147092 - 39147004
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| ||||| || |||||||||||||||||||||    
T  39147092 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataag 39147004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 3887050 - 3887159
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||   |||||| |    
T  3887050 cacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataagtcttccttcaa 3887149  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  3887150 ccatgcagtc 3887159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 8391315 - 8391443
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||| |||  ||| |||||||||||||||||   |||||| |    
T  8391315 cacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacagg-agtaccaaacaattcttataagtcttccttcaa 8391413  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
     |||| |||||||||| | |||| ||||||    
T  8391414 tcatgtagtctcatgcctacacggcctcag 8391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 18304581 - 18304495
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||  |||||||    
T  18304581 gcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataagc 18304495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 29680099 - 29680166
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggt 262  Q
    |||||||||||||||||||||||||  |||| |||||| ||| |||||||||||||||||||||||||    
T  29680099 acacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatataggt 29680166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 4673466 - 4673552
Alignment:
Q  199 cgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||| ||||||  |||| ||| ||| |||||||||||||||| ||||| || |||| ||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataag 4673552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 15513005 - 15513094
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagca 286  Q
    |||| |||| |||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| ||| ||| | |||||||||||||||||    
T  15513005 cacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatattggtagta-ccaacaattcttataagca 15513094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 20858538 - 20858623
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||| |||||||||||| ||||||||||| | |||||||| |||||||||||||||||    || ||||||||||||||||||    
T  20858538 cttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataagc 20858623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 30684549 - 30684638
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||| | ||| |||||||||| |||||||    
T  30684549 cacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataagc 30684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 30719798 - 30719887
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||| |||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||||| ||| |||||||||| |||||||    
T  30719798 cacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagc 30719887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 18750201 - 18750293
Alignment:
Q  209 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||||| |  |||||| ||||||    
T  18750201 tggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatccttccttcaaccatg 18750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 11757274 - 11757337
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 259  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||||||||| |||||||||||    
T  11757274 cacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatata 11757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 24182239 - 24182341
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||  |||| |||| |  || | ||||||||||||||||||||||||| ||||| | ||| |||| |||||||||||||  |||||| ||    
T  24182239 cacgcttaactgttaagttattatggtttggggtaccgaaagaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaac 24182338  T
Q  297 cat 299  Q
    |||    
T  24182339 cat 24182341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 4657992 - 4658073
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||| ||||||||| |||||  ||||| ||| |||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  4657992 taactgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa 4658073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 42429259 - 42429194
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    |||||| |||||| ||||||||| |||| ||| |||||||||||||||||  ||||||| ||||||    
T  42429259 aaagaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatg 42429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 16370740 - 16370811
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 306  Q
    ||||||||| | ||||||||||||| || ||| |||||||||||||||||   |||||| |||||| |||||    
T  16370740 aaagaagatacgtcttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgcagtct 16370811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 2058696 - 2058737
Alignment:
Q  243 tgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||| ||| |||||||||| ||||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaattcatataag 2058737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 5066923 - 5066972
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||    
T  5066923 aaagaaaatgcatcttgttgatatagataataccaaacaattcttataag 5066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 32574651 - 32574740
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||| || |||| ||||||  || |||||| |||| ||||||||| |||||  ||||||| ||| |||||||||| |||||||    
T  32574651 cacgcttaactatgaagttattatagtttgggctaccaaaagaaagatgcattttgtttgtataggtagtaccaaacaattcctataagc 32574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 43356652 - 43356701
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||| |||||| | ||||| ||| |||||||||||||||||    
T  43356652 aaagaagatgcatattgttggtttaggttgtaccaaacaattcttataag 43356701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 2044 - 2173
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2044 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2143  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||||||| | |||||| ||||||    
T  2144 ccatgcagtctcatacctgcacggcctcag 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20845654 - 20845783
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20845654 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagccttccttcaa 20845753  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||||||| | |||||| ||||||    
T  20845754 ccatgcagtctcatacctgcacggcctcag 20845783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20054073 - 20054202
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054073 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054172  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20054173 ccatgcagtcccatacctgcacggcctcag 20054202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20054529 - 20054658
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054529 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054628  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20054629 ccatgcagtcccatacctgcacggcctcag 20054658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20054985 - 20055114
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054985 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055084  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20055085 ccatgcagtcccatacctgcacggcctcag 20055114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20055441 - 20055570
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055441 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055540  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20055541 ccatgcagtcccatacctgcacggcctcag 20055570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20055897 - 20056026
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055897 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055996  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20055997 ccatgcagtcccatacctgcacggcctcag 20056026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20056353 - 20056482
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20056353 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20056452  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20056453 ccatgcagtcccatacctgcacggcctcag 20056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20057256 - 20057385
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20057256 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20057355  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20057356 ccatgcagtcccatacctgcacggcctcag 20057385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 201 - 325
Target Start/End: Original strand, 20061188 - 20061313
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  20061188 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 20061287  T
Q  300 ggagtctcatgcatgcacgacctcag 325  Q
    | |||| ||| | |||||||||||||    
T  20061288 gcagtcccatacctgcacgacctcag 20061313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 50002699 - 50002829
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50002699 acacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 50002798  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    |||||| |||| ||||| | |||| ||||||    
T  50002799 accatgcagtcccatgcctacacggcctcag 50002829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 20057712 - 20057841
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  20057712 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttctttcaa 20057811  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  20057812 ccatgcagtcccatacctgcacggcctcag 20057841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 38341059 - 38340930
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  38341059 cacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 38340960  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  38340959 ccatgcagtcccatacctgcacggcctcag 38340930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 43057058 - 43057167
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||  |||||| |    
T  43057058 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagccttccttcaa 43057157  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  43057158 ccatgtagtc 43057167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 43057516 - 43057629
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  43057516 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 43057615  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  43057616 ccatgtagtctcat 43057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 52250359 - 52250250
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  52250359 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcga 52250260  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  52250259 ccatgtagtc 52250250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 20056808 - 20056898
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  20056808 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagc 20056898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 2635078 - 2634949
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| ||   ||||||     
T  2635078 acacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttatgagttatccttca 2634979  T
Q  295 accatggagtctcatgcatgcacgacctca 324  Q
    |||||| |||| ||| | ||||| ||||||    
T  2634978 accatgcagtcccatacctgcacaacctca 2634949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 16451926 - 16452035
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16451926 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16452025  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  16452026 ccatgtagtc 16452035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 16461079 - 16461188
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16461079 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16461178  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  16461179 ccatgtagtc 16461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 20060337 - 20060422
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  20060337 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20060422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 35759601 - 35759730
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35759601 cacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35759700  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  35759701 ccatgcagtcccatacctgcacggcctcag 35759730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 35760907 - 35761036
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||  |||||||| || |||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35760907 cacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35761006  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||||||| | |||||| ||||||    
T  35761007 ccatgcagtctcatacctgcacggcctcag 35761036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 50002285 - 50002406
Alignment:
Q  204 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 302  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||| |||||| |    
T  50002285 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgta 50002384  T
Q  303 gtctcatgcatgcacgacctca 324  Q
    ||| ||||| | |||| |||||    
T  50002385 gtcccatgcctacacggcctca 50002406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 51372867 - 51372970
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||||||  |||||| |    
T  51372867 cacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagccttccttcaa 51372966  T
Q  296 ccat 299  Q
    ||||    
T  51372967 ccat 51372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 30872946 - 30873072
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||   |||||| ||||    
T  30872946 gcttaattgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaacca 30873045  T
Q  299 tggagtctcatgcatgcacgacctcag 325  Q
    |  |||||||| | |||||| ||||||    
T  30873046 tacagtctcatacctgcacggcctcag 30873072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 2328463 - 2328359
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| ||||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatg 2328364  T
Q  301 gagtc 305  Q
     ||||    
T  2328363 cagtc 2328359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 46693728 - 46693831
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| ||||  |||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  46693728 cacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagccttccttcaa 46693827  T
Q  296 ccat 299  Q
    ||||    
T  46693828 ccat 46693831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 12883678 - 12883580
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttc 293  Q
    |||| ||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||| | ||||||    
T  12883678 acacacttaactgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtattccttc 12883580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 12728142 - 12728056
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggt-atcaaacaattcttataag 284  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  || | |||||||||||||||||    
T  12728142 gcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataag 12728056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 31822657 - 31822769
Alignment:
Q  198 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||||||| ||||||||||| || ||| |||| |||||||||||    |||||| ||    
T  31822657 acgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaatcttccttcaac 31822756  T
Q  297 catggagtctcat 309  Q
    |||| ||||||||    
T  31822757 catgtagtctcat 31822769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 50003068 - 50003156
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||||||||||| ||| | ||||||| |||||||    
T  50003068 cacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataag 50003156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 16907388 - 16907298
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||| |||||||||| |||||||  | || |||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  16907388 acacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagc 16907298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 197 - 298
Target Start/End: Complemental strand, 23180883 - 23180781
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||| ||||||| ||||| |||| |||| ||||||| |||||||||||||||||| ||| ||| |||||||||||| || |||||| |    
T  23180883 cacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatataggtagtaccaagcaattcttataatcattccttcaa 23180784  T
Q  296 cca 298  Q
    |||    
T  23180783 cca 23180781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 52250696 - 52250641
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 251  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52250696 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 52251033 - 52250978
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 251  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52251033 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 16440576 - 16440660
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||| || |||| ||||||||||||||||| ||| ||| ||||||||||||| ||| ||| ||| |||||| ||||||||||    
T  16440576 cttaactttgaagttattatagaatgagctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataag 16440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 7548243 - 7548156
Alignment:
Q  198 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||| ||||||||||||||  |||| |||||| ||| ||| ||||||||||||||||||| |  || ||||||||| |||||||    
T  7548243 acgcttaattgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataag 7548156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 10820702 - 10820658
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  10820702 aagatgtatcttattgatataggtagtaccaaacaattcttataa 10820658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 31823097 - 31823161
Alignment:
Q  217 ttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 280  Q
    |||| |||||||||||| ||| |||||||||| || ||||||||||| ||| |||| ||||||||    
T  31823097 ttatggaatgagctaccaaaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 31284269 - 31284397
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  31284269 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 31284368  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||| |||| ||| | ||||||||||||    
T  31284369 ccatgcagtcccatacctgcacgacctca 31284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 28561899 - 28561770
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  28561899 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 28561800  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  28561799 ccatgcagtcccatacctgcacggcctcag 28561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 13150547 - 13150657
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  13150547 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 13150646  T
Q  296 ccatggagtct 306  Q
    ||||| |||||    
T  13150647 ccatgtagtct 13150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 201 - 325
Target Start/End: Complemental strand, 39653313 - 39653188
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||| |||||    
T  39653313 cttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataagctttccttcaaccat 39653214  T
Q  300 ggagtctcatgcatgcacgacctcag 325  Q
    | |||| ||| | |||||| ||||||    
T  39653213 gcagtcccatacctgcacggcctcag 39653188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 11180027 - 11180136
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  11180027 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 11180126  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  11180127 ccatgtagtc 11180136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 16811534 - 16811425
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||||||||  |||||| |    
T  16811534 cacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataagccttccttcaa 16811435  T
Q  296 ccatggagtc 305  Q
    ||||||||||    
T  16811434 ccatggagtc 16811425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 50347899 - 50347786
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  50347899 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 50347800  T
Q  296 ccatggagtctcat 309  Q
    ||| | ||||||||    
T  50347799 ccaagtagtctcat 50347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 25239069 - 25239199
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  ||||||     
T  25239069 acacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttca 25239168  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    |||||  |||| ||| | | |||||||||||    
T  25239169 accatatagtcccatacctacacgacctcag 25239199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 39641091 - 39640977
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||   ||||||     
T  39641091 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataagtcttccttca 39640992  T
Q  295 accatggagtctcat 309  Q
    |||||| ||||||||    
T  39640991 accatgtagtctcat 39640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 13150092 - 13150201
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  13150092 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 13150191  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  13150192 ccatgtagtc 13150201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 14814102 - 14813989
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||  |||||  |    
T  14814102 cacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataagccttcctttaa 14814003  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  14814002 ccatgcagtctcat 14813989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 32227653 - 32227544
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227653 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227554  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  32227553 ccatgtagtc 32227544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 41472453 - 41472325
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |    
T  41472453 cacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc-ttccttcaa 41472355  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||||||| | || ||||||||||    
T  41472354 ccatgcagtctcatacctgtacgacctcag 41472325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 20885110 - 20885238
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||   |||||| |    
T  20885110 cacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaa 20885209  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||| |||| ||| | | ||||||||||    
T  20885210 ccatgtagtcacatacctacacgacctca 20885238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 32386727 - 32386830
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  32386727 cacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 32386826  T
Q  296 ccat 299  Q
    ||||    
T  32386827 ccat 32386830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 8067433 - 8067344
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||    
T  8067433 cacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagc 8067344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 14820307 - 14820218
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  14820307 cacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaattcttataagc 14820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 25230241 - 25230370
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25230241 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25230340  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | | |||||||||||    
T  25230341 ccatgtagtcccatacctacacgacctcag 25230370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 25237828 - 25237957
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25237828 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25237927  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | | |||||||||||    
T  25237928 ccatgtagtcccatacctacacgacctcag 25237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 25238677 - 25238790
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||| || | ||| |||||||||||||||||   |||||| |    
T  25238677 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataagtcttccttcaa 25238776  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  25238777 ccatgtagtctcat 25238790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 27187323 - 27187412
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||||||    
T  27187323 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagc 27187412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 32227214 - 32227323
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227214 cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227313  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  32227314 ccatgtagtc 32227323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 300
Target Start/End: Complemental strand, 2911248 - 2911144
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||  |||||||||||| |||||| || || ||| |    
T  2911248 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataaccattctttcaa 2911149  T
Q  296 ccatg 300  Q
    |||||    
T  2911148 ccatg 2911144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 4067353 - 4067441
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  4067353 cacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 4067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 200 - 320
Target Start/End: Complemental strand, 7494031 - 7493910
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| |||||||||||||| |  || |||||||||| |||||||||||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7494031 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7493932  T
Q  299 tggagtctcatgcatgcacgac 320  Q
    || |||||||| | ||||||||    
T  7493931 tgcagtctcatacctgcacgac 7493910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 25230698 - 25230811
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25230698 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25230797  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  25230798 ccatgtagtctcat 25230811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 25238285 - 25238398
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25238285 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25238384  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  25238385 ccatgtagtctcat 25238398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 30529840 - 30529727
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  | |||| |    
T  30529840 cacgcttaactatgaagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaa 30529741  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  30529740 ccatgtagtctcat 30529727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 25248264 - 25248142
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||| ||| |||||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| || |||||  |    
T  25248264 cacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattcctttaa 25248165  T
Q  296 ccatggagtctcatgcatgcacg 318  Q
    ||||| |||| ||| | ||||||    
T  25248164 ccatgcagtcccatacctgcacg 25248142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 25802540 - 25802626
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttat 281  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  25802540 acacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatataggtagtaccaaaccattcttat 25802626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 320
Target Start/End: Complemental strand, 7477341 - 7477220
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| |||||||||||||| |  || |||||||||| ||||||| |||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7477341 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7477242  T
Q  299 tggagtctcatgcatgcacgac 320  Q
    || |||||||| | ||||||||    
T  7477241 tgcagtctcatacctgcacgac 7477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 37045188 - 37045091
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttc 293  Q
    |||||||||||||||||||||||| ||||  | |||| ||| ||||||||| |||||||||||||||  || ||||||||||||||||||| ||||||    
T  37045188 cacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagcattccttc 37045091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 32796936 - 32797016
Alignment:
Q  205 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 32797016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 29224477 - 29224364
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||| ||||||||| |  || |||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||||||   |||||| |    
T  29224477 cacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataagtcttccttcaa 29224378  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  29224377 ccatgcagtctcat 29224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 16811074 - 16810989
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||| | |||   ||||||||||||||||    
T  16811074 cttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagc 16810989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 41474150 - 41474062
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||| ||||||||||| ||||||||||| | ||| ||| ||| ||  ||||||||||||||||  |||||||||||||||||||||    
T  41474150 cacgcttgactgtggagtttttatagaatgatccaccaaaaagaatatcaatcttgttgatataggaagtatcaaacaattcttataag 41474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 26309987 - 26310069
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||| ||||||| || ||||||||||||  |||||||||||||||| ||| |||| || ||| |||| |||||||||||    
T  26309987 ttaactgtcgagttctaatggaatgagctaccataaagaagatgcatctttttggtatatgtagtaacaaaaaattcttataa 26310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 280
Target Start/End: Original strand, 25802997 - 25803081
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 280  Q
    |||||||||||  |||||||||||  |||| | |||||||| |||||| |||||||||  ||||||| ||| |||||||||||||    
T  25802997 cacgcttaactacggagttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagtaccaaacaattctta 25803081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 31103955 - 31104041
Alignment:
Q  201 cttaactgtggagttcttatagaatgag--ctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||| |||| ||||||||| |||||||  ||||| ||| ||| |||||||| |||| ||||| | |||||||||||||||||||||    
T  31103955 cttaaatgtgaagttcttatggaatgagagctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataag 31104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 3890088 - 3890046
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttat 281  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  3890088 aagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 10845036 - 10844907
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10845036 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 10844937  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  10844936 ccatgcagtcccatacctgcacggcctcag 10844907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 22026532 - 22026404
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  22026532 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcattcaa 22026433  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||| |||| ||| | |||||| |||||    
T  22026432 ccatgcagtcccatacctgcacggcctca 22026404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 27926052 - 27925923
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  27926052 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 27925953  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  27925952 ccatgcagtcccatacctgcacggcctcag 27925923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 12827247 - 12827349
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  12827247 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 12827346  T
Q  296 cca 298  Q
    |||    
T  12827347 cca 12827349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 41659097 - 41659227
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  41659097 acacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 41659196  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    |||||| |||| ||| | |||||||| ||||    
T  41659197 accatgcagtcccatacctgcacgacatcag 41659227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 2044211 - 2044098
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |    
T  2044211 cacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaa 2044112  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  2044111 ccatgtagtctcat 2044098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 10844608 - 10844717
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||||  |||||| |    
T  10844608 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagccttccttcaa 10844707  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  10844708 ccatgcagtc 10844717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 22548988 - 22549097
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  22548988 cacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 22549087  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  22549088 ccatgcagtc 22549097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 25144925 - 25144836
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  25144925 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagc 25144836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 25147689 - 25147576
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||  |||||| |    
T  25147689 cacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagccttccttcaa 25147590  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  25147589 ccatgcagtctcat 25147576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 22548542 - 22548629
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  22548542 cacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22548629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 17103234 - 17103121
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||||||   |||||| |    
T  17103234 cacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataagtcttccttcaa 17103135  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  17103134 ccatgcagtctcat 17103121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 32292550 - 32292421
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||| | ||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||| |||||| |    
T  32292550 cacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagcattccttcaa 32292451  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||| ||||||    
T  32292450 ccatgcagtcccatacttgcacggcctcag 32292421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 6464903 - 6465007
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  6464903 cacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 6465002  T
Q  296 ccatg 300  Q
    |||||    
T  6465003 ccatg 6465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 28453491 - 28453364
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||| |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||| |||| ||||||||||||||||   || ||| |    
T  28453491 cacgcttaactgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataagttttctttcaa 28453392  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||||||| | |||||||||||    
T  28453391 ccatgaagtctcatacctgcacgacctc 28453364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 12100844 - 12100731
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| |||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||   ||||| |    
T  12100844 cacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagcttgccttcaa 12100745  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  12100744 ccatgcagtctcat 12100731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 25148120 - 25148031
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||   | ||||||||||||||||||    
T  25148120 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagc 25148031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 27022331 - 27022420
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  27022331 cacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagc 27022420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 34308472 - 34308585
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  34308472 cacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagccttccttcaa 34308571  T
Q  296 ccatggagtctcat 309  Q
    ||||  ||||||||    
T  34308572 ccatacagtctcat 34308585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 309
Target Start/End: Original strand, 27819238 - 27819352
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||||||||||| |||| ||||||||||  |||| |||||||||| |||||||||||||| ||| |||||||||||||| |||  ||||||     
T  27819238 acacacttaactgtggagtttttatggaatgagctattgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttca 27819337  T
Q  295 accatggagtctcat 309  Q
    |||||| ||||||||    
T  27819338 accatgaagtctcat 27819352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 325
Target Start/End: Original strand, 28375038 - 28375176
Alignment:
Q  188 gaattcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagca 286  Q
    |||||||  ||||||||||| || || | |||| ||| |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||     
T  28375038 gaattcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagcc 28375137  T
Q  287 ctccttctaccatggagtctcatgcatgcacgacctcag 325  Q
     |||||| | |||| |||||||| | |||||| ||||||    
T  28375138 ttccttcaatcatgcagtctcatacctgcacggcctcag 28375176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 8080335 - 8080444
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  8080335 cacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagctttccttcaa 8080434  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  8080435 ccatgtagtc 8080444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 21316106 - 21316224
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||||||||||||||  |||||||||| |||| || |||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||  |||||    
T  21316106 cttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccat 21316205  T
Q  300 ggagtctcatgcatgcacg 318  Q
      |||||||| | ||||||    
T  21316206 acagtctcatacctgcacg 21316224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 22840530 - 22840635
Alignment:
Q  205 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 303  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||| | ||| |||||||||||||||||   || ||| |||||| ||    
T  22840530 actgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtag 22840629  T
Q  304 tctcat 309  Q
    ||||||    
T  22840630 tctcat 22840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 41913123 - 41913034
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||| ||||||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | | ||||||||||||||||||    
T  41913123 cacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagc 41913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 34308928 - 34309045
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttg----atataggtggtatcaaacaattcttataagcactcct 291  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||    |||||||| ||| |||||| |||||||||||  ||||    
T  34308928 cacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttcttataagccttcct 34309027  T
Q  292 tctaccatggagtctcat 309  Q
    || |||||  ||||||||    
T  34309028 tcaaccatacagtctcat 34309045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 33852251 - 33852373
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||| ||||||||| ||||| |||||| ||| |||||| ||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  33852251 cacgcttaattgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataagttttccttcaa 33852350  T
Q  296 ccatggagtctcatgcatgcacg 318  Q
    ||||  |||||||| | ||||||    
T  33852351 ccatacagtctcatacctgcacg 33852373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 15819014 - 15819121
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||| ||||||||| ||||| |||||||||| ||||||||||| |||||||||| || ||| ||||||||| || |||||| |||||| ||||||    
T  15819014 ttaactgtg-agttcttatggaatgtgctaccgaaaagaagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatg 15819112  T
Q  301 gagtctcat 309  Q
      |||||||    
T  15819113 ttgtctcat 15819121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 27021911 - 27021982
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 306  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||| |||||    
T  27021911 aaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtct 27021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 31283648 - 31283719
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 271  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  31283648 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 15567548 - 15567653
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||| ||||||| |||||||||||  ||||| ||||| ||| ||||||| ||||||||| |||| || || |||||||||||||||||||  ||||||     
T  15567548 acacgattaactgcggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagccttccttcc 15567647  T
Q  295 accatg 300  Q
    ||||||    
T  15567648 accatg 15567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 30527479 - 30527563
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||  |||| |||||| ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||    
T  30527479 cttaactgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggtaccaaacaattcttataag 30527563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 1297161 - 1297047
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||| ||||||||||||| |||| | |||||||| ||| ||  ||||||||| ||||||| ||| |||||||||||||||||   | ||||     
T  1297161 acacacttaactatggagttcttatataatgggataccgaaaagaatataaatcttgttggtataggtagtaccaaacaattcttataagttttacttca 1297062  T
Q  295 accatggagtctcat 309  Q
    |||||| ||||||||    
T  1297061 accatgcagtctcat 1297047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 3744788 - 3744663
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| ||| ||||||||||  |||| |||||| ||| |||| ||||| |||||| ||||||| || ||||||||||||||||||   |||||| ||||    
T  3744788 gcttaattgtagagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaacca 3744689  T
Q  299 tggagtctcatgcatgcacgacctca 324  Q
    || |||| ||| | | ||||||||||    
T  3744688 tgcagtcccatacctacacgacctca 3744663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 3745254 - 3745145
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||| ||||||||||| |||| ||||| |||||| ||| |||||||||| |||||| ||||||| |||  ||||| ||||||||||   |||||| |    
T  3745254 cacgcttgactgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttttccttcaa 3745155  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  3745154 ccatgtagtc 3745145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 22705282 - 22705238
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataa 22705238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 25307914 - 25307855
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatatag 260  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||| |||||||||||||||    
T  25307914 gcttaactgtggagttcttacagaatgggctacc-aaaaaagatgtatcttgttgatatag 25307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 30334940 - 30334989
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||||||    
T  30334940 aaagaagatgtatcttgttggtataggtagtatcaaacaatttttataag 30334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 6466820 - 6466775
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaatttttataag 6466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 15568041 - 15568086
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||    
T  15568041 aagatgcatcttgttgatataggtcataccaaacaattgttataag 15568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 41754442 - 41754314
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  41754442 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 41754343  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||| |||||||| | |||||| |||||    
T  41754342 ccatgcagtctcatacctgcacggcctca 41754314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 30966843 - 30966714
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  30966843 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 30966744  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| |||| ||| ||||||    
T  30966743 ccatgcagtcccatacatgtacggcctcag 30966714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 8256679 - 8256570
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  8256679 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 8256580  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  8256579 ccatgtagtc 8256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 11388340 - 11388228
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11388340 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11388242  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  11388241 ccatgtagtctcat 11388228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 24818479 - 24818350
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  24818479 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 24818380  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| |||||||| ||||||    
T  24818379 ccatgcagtcccatacatgcacggcctcag 24818350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 25337990 - 25338119
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  25337990 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 25338089  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||||||||||    
T  25338090 ccatgcagtcccatacctgcacgacctcag 25338119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 16379090 - 16378963
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||   |||||| |    
T  16379090 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataagacttccttcaa 16378991  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||||||| | |||||| ||||    
T  16378990 ccatgcagtctcatacttgcacggcctc 16378963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 1912677 - 1912591
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1912677 cacgcttaactgtggagttcttatggaatgggctaccaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 1912591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 309
Target Start/End: Original strand, 18098874 - 18098984
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||||    
T  18098874 gcttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaacca 18098973  T
Q  299 tggagtctcat 309  Q
    || ||||||||    
T  18098974 tgtagtctcat 18098984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 33175112 - 33175002
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  33175112 acacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 33175013  T
Q  295 accatggagtc 305  Q
    |||||| ||||    
T  33175012 accatgtagtc 33175002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 25434049 - 25434158
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||  |||||| |    
T  25434049 cacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagccttccttcaa 25434148  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  25434149 ccatgaagtc 25434158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 29804835 - 29804746
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  29804835 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 29804746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 30966387 - 30966278
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  30966387 cacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 30966288  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  30966287 ccatgcagtc 30966278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 33771151 - 33771065
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33771151 gcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 33771065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 5399810 - 5399899
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  5399810 cacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 5399899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 33174656 - 33174567
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33174656 cacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 33174567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 16379547 - 16379419
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||| ||||||   ||||||     
T  16379547 acacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataagtcttccttca 16379448  T
Q  295 accatggagtctcatgcatgcacgacctc 323  Q
    |||||| |||| ||| | |||||| ||||    
T  16379447 accatgcagtcccatacctgcacggcctc 16379419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 38898905 - 38899015
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  |||| | |||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |    
T  38898905 cacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagctctccttcaa 38899004  T
Q  296 ccatggagtct 306  Q
    ||||| |||||    
T  38899005 ccatgtagtct 38899015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 11394686 - 11394575
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11394686 cacgcttaactgtgaagttcttatggaat-agctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11394589  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  11394588 ccatgtagtctcat 11394575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 83171 - 83057
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||| |||||||||| |||||||||||| ||| || ||| |||||||||| ||||||| ||| ||||| |||||||||||||  |||||     
T  83171 acacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataagcataccttca 83072  T
Q  295 accatggagtctcat 309  Q
    |||||| ||||||||    
T  83071 accatgtagtctcat 83057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 1707195 - 1707081
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||||||||||||||||   ||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  1707195 acactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 1707096  T
Q  295 accatggagtctcat 309  Q
    | |||| ||||||||    
T  1707095 atcatgtagtctcat 1707081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 27882918 - 27883048
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctac-cgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||| |||||||||||||| ||| |  ||||   |||||||||||||||| ||||||||| |  || ||||||||||||||||||| ||||||     
T  27882918 acacgcttaattgtggagttcttatggaacggcctacaaaaaagaagatgcatcttattgatatagataataccaaacaattcttataagcattccttca 27883017  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    || ||| |||||||| |||||||| ||||||    
T  27883018 acaatgcagtctcatacatgcacggcctcag 27883048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 29259613 - 29259722
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || |||||||||  ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||  |||||| |    
T  29259613 cacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagccttccttcaa 29259712  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  29259713 ccatgcagtc 29259722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 20502175 - 20502050
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||| |||| |||| |||||||||  |||| |||||| ||| |||| |||||||||||||||||   ||| ||||||||||||||||||  |||||| ||    
T  20502175 cacgtttaattgtgaagttcttatgaaatgggctaccaaaaaaagaagcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaac 20502076  T
Q  297 catggagtctcatgcatgcacgacct 322  Q
    |||| |||| ||| | ||||||||||    
T  20502075 catgcagtcccatacttgcacgacct 20502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 30963713 - 30963801
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||| |||| |  || |||||| ||||||||||||||||||||||||||||| | | || ||||||||||||||    
T  30963713 cacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataag 30963801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 1953269 - 1953179
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcag 325  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||| |   |||||| |||||| |||||||| | |||||||| ||||    
T  1953269 aaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcag 1953179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 15620051 - 15619929
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| || || | | ||  |||||||||| ||||||||||||||||| ||| ||||||||||||||||||   ||||| |    
T  15620051 cacgcttaattgtggagttcttatggattgggtttccaaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagcttgccttcaa 15619952  T
Q  296 ccatggagtctcatgcatgcacg 318  Q
    | ||| |||||||| | ||||||    
T  15619951 ctatgcagtctcatacttgcacg 15619929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 8074042 - 8073957
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||| || ||||||||||||  |||| |||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  8074042 gcttatctatggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 13191121 - 13191039
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||| ||||||||||||| ||||  ||||| ||| ||||||||||||||||| |||| || ||| |||||||||||||||||    
T  13191121 taactatggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataag 13191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 30963299 - 30963345
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  30963299 aagatgcatcttgttgatataggtagtacctaacaattcttataagc 30963345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 30961876 - 30961964
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||| ||||||||||||||||||| |  |  |||||||||| ||  ||||||||||||||||||||| ||| ||| ||| |||||||||    
T  30961876 cacgtttaactgtggagttcttatggtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttataag 30961964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 15639848 - 15639798
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| || |||||||||||||| ||| |||||||||| |||||||    
T  15639848 aaagaagatgtatgttgttgatataggtagtaccaaacaattcctataagc 15639798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 18447954 - 18447999
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||| | || ||| |||||||||||||||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaattcttataag 18447999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 32377712 - 32377749
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa 237  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  32377712 gcttaactgtggagttcttttggaatgagctaccgaaa 32377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 107456 - 107565
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||| |    
T  107456 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagccttccttcaa 107555  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  107556 ccatgcagtc 107565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 13492942 - 13492829
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  13492942 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttccttcaa 13492843  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  13492842 ccatgcagtctcat 13492829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 16520121 - 16520008
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||||||  |||||| |    
T  16520121 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagccttccttcga 16520022  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  16520021 ccatgtagtctcat 16520008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 20896681 - 20896794
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20896681 cacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20896780  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  20896781 ccatgtagtctcat 20896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 20850474 - 20850346
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||||||||||  |||||| |    
T  20850474 cacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagccttccttcaa 20850375  T
Q  296 ccatggagtctcatgcatgcacgacctca 324  Q
    ||||| |||| ||| | |||||| |||||    
T  20850374 ccatgcagtcccatacctgcacggcctca 20850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 17027524 - 17027651
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17027524 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17027623  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||| ||| | |||||| ||||    
T  17027624 ccatgcagtcccatacctgcacggcctc 17027651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 6330905 - 6331018
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||   |||||| |    
T  6330905 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataagtcttccttcaa 6331004  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  6331005 ccatgtagtctcat 6331018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 13191506 - 13191615
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  13191506 cacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 13191605  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  13191606 ccatgcagtc 13191615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 13492485 - 13492396
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  13492485 cacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagc 13492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 203 - 305
Target Start/End: Complemental strand, 7912025 - 7911922
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 301  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| ||||||     
T  7912025 taactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgc 7911926  T
Q  302 agtc 305  Q
    ||||    
T  7911925 agtc 7911922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 15929736 - 15929646
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  15929736 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagc 15929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 17851071 - 17850942
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||| ||||||  |||||| |||| || ||  |    
T  17851071 cacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttatcagcattcttttaa 17850972  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| | |||||||||||||    
T  17850971 ccatgcagtcccatacttgcacgacctcag 17850942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 20126175 - 20126288
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||| |    
T  20126175 cacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagccttccttcaa 20126274  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  20126275 ccatgtagtctcat 20126288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 2681209 - 2681297
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  2681209 cacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataag 2681297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 3652634 - 3652530
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||  |||||| ||||||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatg 3652535  T
Q  301 gagtc 305  Q
     ||||    
T  3652534 tagtc 3652530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 27334301 - 27334185
Alignment:
Q  210 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 308  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27334202  T
Q  309 tgcatgcacgacctcag 325  Q
    | | |||||||||||||    
T  27334201 tacctgcacgacctcag 27334185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 27395041 - 27394925
Alignment:
Q  210 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 308  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27394942  T
Q  309 tgcatgcacgacctcag 325  Q
    | | |||||||||||||    
T  27394941 tacctgcacgacctcag 27394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 9352215 - 9352102
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| | |||||||    ||||| |    
T  9352215 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataagtctcccttcga 9352116  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  9352115 ccatgtagtctcat 9352102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 11062438 - 11062325
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||  ||||| |||||||||||  |||||| |    
T  11062438 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagccttccttcaa 11062339  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||| ||||    
T  11062338 ccatgtagtttcat 11062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 7912463 - 7912336
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| ||||||   |||||| |    
T  7912463 cacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataagttttccttcaa 7912364  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||| ||| | |||||| ||||    
T  7912363 ccatgcagtcccatacctgcacggcctc 7912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 20735844 - 20735759
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  20735844 cttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagc 20735759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 322
Target Start/End: Original strand, 2720560 - 2720683
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaagaa--gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||||||||||||||| |||||||||||| ||| ||  ||||  ||||||| |||||||| ||| |||||||||||||||||   |||||| ||||    
T  2720560 cttaactgtggagttcttatggaatgagctaccaaaaaaaaagatgtgtcttgttaatataggtagtaccaaacaattcttataagtcttccttcaacca 2720659  T
Q  299 tggagtctcatgcatgcacgacct 322  Q
    || |||||||| | ||||||||||    
T  2720660 tgcagtctcatacctgcacgacct 2720683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 17731102 - 17731194
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgc----atcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||    ||||||||||||||||| ||| |||||||||||||||||    
T  17731102 cacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattcttataag 17731194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 17851527 - 17851438
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||  ||||||||||    
T  17851527 cacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagc 17851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 21312124 - 21312011
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| |||| |||||||  |||| |||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  21312124 cacgtttaactatggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaa 21312025  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  21312024 ccatgcagtctcat 21312011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 23986314 - 23986399
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| ||||||||| |  ||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  23986314 cttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagc 23986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 2890832 - 2890959
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||| ||||||||||| ||  | |||||||||||||| |  |||||| |    
T  2890832 cacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaaccttccttcaa 2890931  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||| ||| | |||||| ||||    
T  2890932 ccatgcagtcccatacctgcacggcctc 2890959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 31821704 - 31821798
Alignment:
Q  216 cttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcat 309  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||| | ||| |||| |||||||||||||| |||||| |||||| ||||||||    
T  31821704 cttatggaatgagctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcat 31821798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 9440306 - 9440391
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| ||||||||| || ||||||||||||| ||| |||||||||||||||||| || ||| | ||||||||||||||||    
T  9440306 cttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataagc 9440391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 28583112 - 28583027
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||| ||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  28583112 cttagctgtggatttcttatggaatgaactaccggaaagatgatgcatcttgttgatatagatcgtatcaaataattcttataagc 28583027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 23776592 - 23776485
Alignment:
Q  198 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| || || |||||||||||   |||||| ||    
T  23776592 acgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataagtcttccttcaac 23776494  T
Q  297 catggagtc 305  Q
    |||| ||||    
T  23776493 catgtagtc 23776485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 14771716 - 14771825
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| ||||    ||||  |||||| ||| ||||||||||||||||| ||| |||||||||||||||||   |||||| |||||    
T  14771716 cttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccat 14771815  T
Q  300 ggagtctcat 309  Q
    | ||||||||    
T  14771816 gcagtctcat 14771825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 21311668 - 21311559
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||| ||||||||||| ||||||||| || ||| ||||||| |||||||| || |||||  || |||||||||||||||||   |||||| |    
T  21311668 cacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtttatctaggtaataccaaacaattcttataaggcttccttcaa 21311569  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  21311568 ccatgcagtc 21311559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 9440849 - 9440973
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| |||||||||| ||||||||| |  || ||||| |||| ||| |||||||||||||||| | || ||| |||| |||||||||||||| ||||||     
T  9440849 acacacttaactgtgaagttcttatggtttgggctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcattccttca 9440948  T
Q  295 accatggagtctcatgcatgcacga 319  Q
    |||||| |||  ||||| |||||||    
T  9440949 accatgtagttccatgcctgcacga 9440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 15929338 - 15929263
Alignment:
Q  211 gagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||   || ||||||||||||||||||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagc 15929263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 17205479 - 17205405
Alignment:
Q  209 tggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||| ||||| |||||| ||| |||||| ||||||||| || |||| ||| ||||||||||||||||    
T  17205479 tggagttcttatggaatgggctaccaaaacaagatgaatcttgttggtaaaggtagtaccaaacaattcttataa 17205405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 28780263 - 28780209
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  28780263 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 28780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 1991701 - 1991617
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||| ||  || |||||||||||| |||||    
T  1991701 ttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtttagatatgtaataccaaacaattcttgtaagc 1991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 28065831 - 28065920
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctacc----gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||| |||||||||||||| |||| |||||||     ||| ||||||||||||||||||| || | ||| ||||||||||||||||||    
T  28065831 gcttaattgtggagttcttatggaataagctaccaaaaaaaaaaagatgcatcttgttgatagagatagtaccaaacaattcttataagc 28065920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 32292995 - 32292915
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacga 319  Q
    |||||| || |||||| ||||||| ||| ||||||||||||||||||  || ||| |||||| |||||||| | |||||||    
T  32292995 aagatgtattttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacga 32292915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 33774994 - 33775101
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagcta-ccgaaagaagatgca--tcttgttgatataggtggtatcaaacaattcttataagcactcctt 292  Q
    |||| |||||||||||||||||||| |||||  ||| |  ||||||||||||  |||||||||||||||| | | || ||||||||||||| |  |||||    
T  33774994 acacacttaactgtggagttcttatggaatggactatcaaaaagaagatgcatctcttgttgatataggtagcaccagacaattcttataatccttcctt 33775093  T
Q  293 ctaccatg 300  Q
    | ||||||    
T  33775094 caaccatg 33775101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 20732727 - 20732642
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||| || ||||| |||| ||||| |||||||||| ||| |||||| || || |||||||| ||| |||| |||||||||||||    
T  20732727 cttaaccgtagagtttttattgaatgggctaccgaaaagaatatgcatattattaatataggtagtaccaaataattcttataagc 20732642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 1373 - 1264
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  1373 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagccttccttcaa 1274  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  1273 ccatgcagtc 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 10453 - 10324
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  10453 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 10354  T
Q  296 ccatggagtctcatgcatgcacgacctcag 325  Q
    ||||| |||| ||| |||||||| ||||||    
T  10353 ccatgcagtcccatacatgcacggcctcag 10324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 19119 - 18992
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  19119 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 19020  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||| ||| | |||||| ||||    
T  19019 ccatgcagtcccatacctgcacggcctc 18992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 18128 - 18215
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  18128 cacgcttaactgtggagttcttatggaattagctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataag 18215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 17591 - 17700
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  | ||||||||| ||| |||||| |||| ||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17591 cacgcttaactgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagctttccttcaa 17690  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  17691 ccatgtagtc 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 2895 - 2786
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2895 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2796  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  2795 ccatgtagtc 2786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 105873 - 105784
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  105873 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagc 105784  T

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Target: scaffold0040 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 2203 - 2325
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| | |||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2203 cacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2302  T
Q  296 ccatggagtctcatgcatgcacg 318  Q
    ||||| |||| ||| | ||||||    
T  2303 ccatgtagtcccatacctgcacg 2325  T

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Target: scaffold0333 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 4710 - 4605
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||| |  |||||| |||||    
T  4710 cttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccat 4611  T
Q  300 ggagtc 305  Q
    | ||||    
T  4610 gcagtc 4605  T

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Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 5174 - 5091
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctt 279  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  5174 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattctt 5091  T

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Target: scaffold0022 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 162671 - 162780
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  162671 cacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagtcttccttcaa 162770  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  162771 ccatgcagtc 162780  T

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Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 69814 - 69921
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 301  Q
    |||||||||||||||||| ||||||||||  |||| || |||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||| || |||     
T  69814 taactgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgc 69913  T
Q  302 agtctcat 309  Q
    ||||||||    
T  69914 agtctcat 69921  T

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Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 163224 - 163167
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 253  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  163224 cacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatcttgtt 163167  T

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Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 163127 - 163181
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  163127 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

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Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 154910 - 154801
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  154910 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 154811  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  154810 ccatgtagtc 154801  T

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Target: scaffold0389 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 13526 - 13592
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggt 262  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13526 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggt 13592  T

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Target: scaffold0005 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 245668 - 245559
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  245668 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 245569  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  245568 ccatgaagtc 245559  T

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Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 245228 - 245150
Alignment:
Q  207 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  245228 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 245150  T

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Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 142306 - 142396
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcag 325  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||| |||| ||| | |||||| ||||||    
T  142306 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcag 142396  T

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Target: scaffold0557 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 2255 - 2154
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    ||||||||||||||||||||  ||||| |||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||||  |||||| ||||    
T  2255 gcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagccttccttcaacca 2156  T
Q  299 tg 300  Q
    ||    
T  2155 tg 2154  T

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Target: scaffold0088 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 324
Target Start/End: Complemental strand, 23785 - 23698
Alignment:
Q  237 agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctca 324  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 23698  T

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Target: scaffold0664 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 3993 - 4102
Alignment:
Q  215 tcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcat 313  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| || ||| |||| ||| | |    
T  3993 tcttataaaatgggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacct 4092  T
Q  314 gcacgacctc 323  Q
    ||||| ||||    
T  4093 gcacggcctc 4102  T

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Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 293
Target Start/End: Complemental strand, 14891 - 14797
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttc 293  Q
    ||||||||||| |||||||||  |||||  |||||||| || |||||||||| |||||||||||  || ||||||||||||||||||| ||||||    
T  14891 gcttaactgtgaagttcttattcaatgaattaccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttataagcattccttc 14797  T

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Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 14695 - 14749
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  14695 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 14749  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 26211 - 26134
Alignment:
Q  209 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| || ||| |||| ||||  |||||||    
T  26211 tggagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatatatgtagtaccaaaaaatttgtataagc 26134  T

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