View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19829_high_31 (Length: 289)

Name: NF19829_high_31
Description: NF19829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19829_high_31
NF19829_high_31
[»] chr4 (8 HSPs)
chr4 (1-289)||(18655565-18655853)
chr4 (1-289)||(18731592-18731880)
chr4 (1-289)||(18679655-18679943)
chr4 (1-289)||(18699488-18699776)
chr4 (30-289)||(18724173-18724432)
chr4 (122-196)||(5091148-5091222)
chr4 (26-107)||(17989320-17989401)
chr4 (26-107)||(18073588-18073669)
[»] chr6 (54 HSPs)
chr6 (1-289)||(27724946-27725234)
chr6 (1-288)||(28786076-28786363)
chr6 (1-288)||(28792197-28792484)
chr6 (1-289)||(27611103-27611391)
chr6 (1-289)||(27718480-27718768)
chr6 (1-289)||(28780937-28781225)
chr6 (13-289)||(26802252-26802528)
chr6 (1-289)||(27698595-27698882)
chr6 (32-289)||(26622805-26623062)
chr6 (32-289)||(26728783-26729040)
chr6 (1-289)||(31284086-31284374)
chr6 (41-289)||(26861454-26861702)
chr6 (15-247)||(27229044-27229276)
chr6 (1-289)||(27678744-27679032)
chr6 (58-289)||(26646334-26646565)
chr6 (58-289)||(26752302-26752533)
chr6 (1-285)||(27604810-27605100)
chr6 (1-270)||(26655787-26656056)
chr6 (1-270)||(26761758-26762027)
chr6 (39-289)||(27593121-27593371)
chr6 (1-289)||(27706503-27706791)
chr6 (1-270)||(27338185-27338454)
chr6 (1-270)||(27398925-27399194)
chr6 (39-289)||(27677715-27677965)
chr6 (1-289)||(26823644-26823926)
chr6 (65-195)||(26884025-26884155)
chr6 (85-280)||(27531307-27531502)
chr6 (30-289)||(28139368-28139627)
chr6 (68-285)||(28234429-28234646)
chr6 (59-285)||(28185222-28185448)
chr6 (97-270)||(25579613-25579786)
chr6 (97-261)||(25481636-25481800)
chr6 (65-285)||(28325343-28325563)
chr6 (59-285)||(28180970-28181196)
chr6 (97-270)||(26142759-26142932)
chr6 (119-285)||(28242720-28242886)
chr6 (97-234)||(26055820-26055957)
chr6 (97-234)||(26075790-26075927)
chr6 (50-117)||(26139464-26139531)
chr6 (134-261)||(29825958-29826085)
chr6 (187-289)||(25507010-25507112)
chr6 (5-62)||(26055761-26055818)
chr6 (26-107)||(27427886-27427967)
chr6 (5-61)||(25538375-25538431)
chr6 (41-117)||(26018760-26018836)
chr6 (5-61)||(26048680-26048736)
chr6 (97-177)||(26048739-26048819)
chr6 (5-61)||(26069849-26069905)
chr6 (97-177)||(26069908-26069988)
chr6 (5-61)||(26075731-26075787)
chr6 (5-61)||(26142700-26142756)
chr6 (97-234)||(25538434-25538571)
chr6 (24-65)||(27531501-27531542)
chr6 (13-61)||(25481585-25481633)
[»] scaffold0349 (3 HSPs)
scaffold0349 (1-286)||(3526-3811)
scaffold0349 (1-289)||(14456-14743)
scaffold0349 (1-129)||(8062-8190)
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-288)||(13734-14021)
scaffold0277 (1-283)||(4778-5060)
[»] chr1 (3 HSPs)
chr1 (30-289)||(268445-268704)
chr1 (9-195)||(28127862-28128042)
chr1 (6-289)||(28164450-28164733)
[»] scaffold1254 (1 HSPs)
scaffold1254 (1-288)||(19-306)
[»] scaffold0419 (1 HSPs)
scaffold0419 (1-288)||(7323-7610)
[»] chr8 (2 HSPs)
chr8 (39-289)||(29273871-29274121)
chr8 (84-234)||(31903732-31903882)
[»] scaffold0019 (1 HSPs)
scaffold0019 (65-289)||(58383-58607)
[»] scaffold0038 (3 HSPs)
scaffold0038 (68-285)||(34590-34807)
scaffold0038 (65-285)||(116658-116878)
scaffold0038 (119-285)||(42882-43048)
[»] scaffold0713 (1 HSPs)
scaffold0713 (50-117)||(5925-5992)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-107)||(59396-59477)


Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 18655853 - 18655565
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18655853 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 18655754  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18655753 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtg 18655654  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18655653 agctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 18655565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 18731880 - 18731592
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731880 attctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 18731781  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  18731780 ttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtg 18731681  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18731680 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18731592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 18679943 - 18679655
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18679943 attctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgattcacttaccaagtg 18679844  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  18679843 ttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtg 18679744  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18679743 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18679655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 18699776 - 18699488
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699776 attctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 18699677  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18699676 ttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtg 18699577  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18699576 acctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18699488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 30 - 289
Target Start/End: Complemental strand, 18724432 - 18724173
Alignment:
Q  30 tctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 129  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724432 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 18724333  T
Q  130 taacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 229  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724332 taacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 18724233  T
Q  230 tcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18724232 tcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 5091222 - 5091148
Alignment:
Q  122 gacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    ||||||||| |||||||||||||  |||||||  |||||||   || ||||||||| ||||||||||||||||||    
T  5091222 gacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgac 5091148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 17989401 - 17989320
Alignment:
Q  26 tttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctca 107  Q
    |||||||||||| ||||||| | ||||| ||||| ||  ||||||||||||||||||  ||||| |||| | ||||||||||    
T  17989401 tttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtgttcctca 17989320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 18073588 - 18073669
Alignment:
Q  26 tttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctca 107  Q
    |||||||||||| ||||||| | ||||| ||||| ||  ||||||||||||||||||  ||||| |||| | ||||||||||    
T  18073588 tttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtgttcctca 18073669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 7e-86; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 27725234 - 27724946
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27725234 attctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 27725135  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||    
T  27725134 ttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27725035  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| || ||||||||||||||||||||||||    
T  27725034 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 27724946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 28786076 - 28786363
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28786076 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 28786175  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  28786176 ttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 28786275  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaacta 288  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| || |||||||||||||||||||||||    
T  28786276 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 28786363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 28792197 - 28792484
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28792197 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 28792296  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  28792297 ttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 28792396  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaacta 288  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| || |||||||||||||||||||||||    
T  28792397 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 28792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 27611391 - 27611103
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||| || ||||||||||||||| |||||||||||||||||    
T  27611391 attctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatggattcacttaccaagtg 27611292  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||    
T  27611291 ttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27611192  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || | |||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| || ||||||||||||||||||||||||    
T  27611191 atcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 27611103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 27718768 - 27718480
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||  |||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  27718768 attctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtg 27718669  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  || ||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||    
T  27718668 ttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27718569  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| || ||||||||||||||||||||||||    
T  27718568 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 27718480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 28780937 - 28781225
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||| |  ||||||||||||||||    
T  28780937 attctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtg 28781036  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  28781037 ttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 28781136  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| || ||||||||||||||||||||||||    
T  28781137 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactat 28781225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 289
Target Start/End: Original strand, 26802252 - 26802528
Alignment:
Q  13 ttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttc 112  Q
    |||||||||||| |||||| ||||||||||||||| ||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||     
T  26802252 ttttttcatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagtttt 26802351  T
Q  113 aggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagag 212  Q
    ||||||| |||||||||  |||||||||| ||  |||||||||| ||||||| || |||||||||||| |||||||||||||||  ||| || |||||||    
T  26802352 aggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagag 26802451  T
Q  213 gggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | |||||||||| ||||||||||  ||| |||||| |||| ||||| || || ||||||||||||||||||||||||    
T  26802452 gagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactat 26802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 27698882 - 27698595
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||||||||| |||||  |||||||||||| |||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  27698882 attctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 27698784  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||| |||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||    
T  27698783 ttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27698684  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| || ||||||||||||||| ||||||||    
T  27698683 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactat 27698595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 32 - 289
Target Start/End: Original strand, 26622805 - 26623062
Alignment:
Q  32 tcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgta 131  Q
    |||||| ||||||||| ||||||||| ||||| ||||||||| ||||||||| |||||  |||||||||||||| || ||||| ||||||||||||||      
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  132 acggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatc 231  Q
    ||||||| |||||  |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26623004  T
Q  232 actcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    ||| |||||||| ||  ||||||||||||| || |||||||||||||||  |||||||    
T  26623005 acttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactat 26623062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 32 - 289
Target Start/End: Original strand, 26728783 - 26729040
Alignment:
Q  32 tcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgta 131  Q
    |||||| ||||||||| ||||||||| ||||| ||||||||| ||||||||| |||||  |||||||||||||| || ||||| ||||||||||||||      
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  132 acggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatc 231  Q
    ||||||| |||||  |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26728982  T
Q  232 actcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    ||| |||||||| ||  ||||||||||||| || |||||||||||||||  |||||||    
T  26728983 acttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactat 26729040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 31284086 - 31284374
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||| ||||| ||||||||  ||||||||| | ||||||||| ||||||| ||||||| ||||||||| ||||||||  |||||  ||||||||     
T  31284086 attctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagta 31284185  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||| || |||||||| |||||||||||  | ||||| || ||  |||||||||| |||||||||| |||||||||||||||||||||||||||  |||    
T  31284186 ttccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtg 31284285  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || || || |||||||||  |||||||    
T  31284286 aacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactat 31284374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 41 - 289
Target Start/End: Original strand, 26861454 - 26861702
Alignment:
Q  41 atggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggtttta 140  Q
    ||||||| ||||||||||| ||| ||||||||  |||||||| ||||||  ||||| || |||||||| ||||| || |||||||||||  | |||||||    
T  26861454 atggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggtttta 26861553  T
Q  141 ctgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaa 240  Q
    | ||  |||||||||| |||||||||| ||||||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||  ||||||||||||    
T  26861554 ccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaa 26861653  T
Q  241 tgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    ||||||| |||||||||| || ||||||||||||||||||  |||||||    
T  26861654 tgccattgaagagtctagaattttcattcctgtgttttctgccaactat 26861702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 27229044 - 27229276
Alignment:
Q  15 ttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcag 114  Q
    |||||||||| |||||||||| | |||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||| || || ||    
T  27229044 ttttcatccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttag 27229143  T
Q  115 gggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggg 214  Q
    ||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||| || ||||||||     
T  27229144 gggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagga 27229243  T
Q  215 gatgaaatcaaaccatcactcgacaatgccatt 247  Q
    || ||||||| ||||||||||| ||| ||||||    
T  27229244 gacgaaatcacaccatcactcgtcaaggccatt 27229276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 27678744 - 27679032
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||| | ||||||| || | ||||||||| ||||||||||||||| ||| ||||| ||||||||   | ||  ||||||||     
T  27678744 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagta 27678843  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| ||||| || |||||||||||  ||||||| || ||| |||||||||| |||||||||| |||||||||| |||||||||||||| |   ||    
T  27678844 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatg 27678943  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
      || |||||||| |||||||||| |||||||||   ||| |||||| ||||||||||||| || ||||||||||||||||||||||||    
T  27678944 gtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactat 27679032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 58 - 289
Target Start/End: Original strand, 26646334 - 26646565
Alignment:
Q  58 ttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaa 157  Q
    |||||| ||||||| | |||||||  ||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||     
T  26646334 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26646433  T
Q  158 gctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtcta 257  Q
    |||||||||| ||||||||| |||||||||||||||||  |||| ||  | ||||| |||||||||| ||||||||||  ||| |||||| |||| ||||    
T  26646434 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26646533  T
Q  258 ggatcttcattcctgtgttttctatcaactat 289  Q
    |||| || ||||||||||||||||||||||||    
T  26646534 ggatttttattcctgtgttttctatcaactat 26646565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 58 - 289
Target Start/End: Original strand, 26752302 - 26752533
Alignment:
Q  58 ttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaa 157  Q
    |||||| ||||||| | |||||||  ||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||     
T  26752302 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26752401  T
Q  158 gctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtcta 257  Q
    |||||||||| ||||||||| |||||||||||||||||  |||| ||  | ||||| |||||||||| ||||||||||  ||| |||||| |||| ||||    
T  26752402 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26752501  T
Q  258 ggatcttcattcctgtgttttctatcaactat 289  Q
    |||| || ||||||||||||||||||||||||    
T  26752502 ggatttttattcctgtgttttctatcaactat 26752533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 27605100 - 27604810
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctc------ttcattttcctatcgattcacttac 94  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||      |||||||||||||  ||||||||||    
T  27605100 attctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttac 27605001  T
Q  95 caagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatg 194  Q
    ||||||||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| ||||||||| || |||||||||||||    
T  27605000 caagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatg 27604901  T
Q  195 accgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaa 285  Q
    |   ||| || | |||||| |||||||||| |||| ||||   ||| |||||| | || || ||||| || ||||||||||||||||||||    
T  27604900 aaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaa 27604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 26655787 - 26656056
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| | || |  |||||||||    
T  26655787 attcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtg 26655886  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||| ||  |||||||||| ||  |||||||||| ||||||| ||  ||||||||||| || ||||||||||||  ||    
T  26655887 ttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatg 26655986  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcc 270  Q
    | || |  ||||| |||||||||| |||||||||||  || |||||| |||| || ||||| || |||||    
T  26655987 atcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcc 26656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 26761758 - 26762027
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| | || |  |||||||||    
T  26761758 attcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtg 26761857  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||| ||  |||||||||| ||  |||||||||| ||||||| ||  ||||||||||| || ||||||||||||  ||    
T  26761858 ttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatg 26761957  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcc 270  Q
    | || |  ||||| |||||||||| |||||||||||  || |||||| |||| || ||||| || |||||    
T  26761958 atcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcc 26762027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 39 - 289
Target Start/End: Complemental strand, 27593371 - 27593121
Alignment:
Q  39 tcatggctaggcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggtt 137  Q
    ||||||||| ||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||||||    
T  27593371 tcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtt 27593273  T
Q  138 ttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcga 237  Q
    | || ||  |||||||||| |||||||||| |||||||||| |||||||||||||||||  ||  || ||||||||  ||||||||| |||||||||       
T  27593272 tcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttct 27593173  T
Q  238 caatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    ||| |||||| ||||||||||||| || ||||||||||||||||||||||||    
T  27593172 caaggccattgaagagtctaggatttttattcctgtgttttctatcaactat 27593121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 27706791 - 27706503
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||| | ||||||| || | ||||||||| ||||||||||| ||| ||| ||||| ||||||||   | ||  ||||||||     
T  27706791 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 27706692  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| ||||| ||  ||||||||||  ||||||| || ||  |||||||||| ||| ||  || ||||||||||||||||||||||||  | | ||    
T  27706691 ttcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 27706592  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||| |||||||||||| |||||||||   ||| |||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  27706591 aacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctat 27706503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 27338454 - 27338185
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||| ||||||||||   |||||||||||| ||||||||| |||||||| |||||| ||||||||| |||||| | | ||||  ||||| |||    
T  27338454 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27338355  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || |||| || |||||||| | |||||||||| ||  |||||||||| ||||||| || |||||||||| | |||||||||||||||   |    
T  27338354 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27338255  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcc 270  Q
    | ||  ||||||| ||||||| || ||||||||| | ||| |||||| ||||||||||||| || |||||    
T  27338254 atcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcc 27338185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 27399194 - 27398925
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||| ||||||||||   |||||||||||| ||||||||| |||||||| |||||| ||||||||| |||||| | | ||||  ||||| |||    
T  27399194 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27399095  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || |||| || |||||||| | |||||||||| ||  |||||||||| ||||||| || |||||||||| | |||||||||||||||   |    
T  27399094 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27398995  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcc 270  Q
    | ||  ||||||| ||||||| || ||||||||| | ||| |||||| ||||||||||||| || |||||    
T  27398994 atcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcc 27398925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 39 - 289
Target Start/End: Complemental strand, 27677965 - 27677715
Alignment:
Q  39 tcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttt 138  Q
    ||||||||| ||||||||||||||| ||| ||||| ||||||||   | ||  |||||||| |||||||  ||||| || |||||||||||  |||||||    
T  27677965 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggttt 27677866  T
Q  139 tactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgac 238  Q
     || ||  |||||||||| ||||||  || ||||||||||||||||||||||||  | | ||| || ||||||||||||||||||| |||||||||   |    
T  27677865 caccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 27677766  T
Q  239 aatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    || |||||| ||||||||||||| || ||| ||||||||||||||||||||    
T  27677765 aaggccattgaagagtctaggatttttattgctgtgttttctatcaactat 27677715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 26823644 - 26823926
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||||||| ||| |||| |||||||||||| ||||||||| ||| ||| |||||||      |||| |||| |||   ||||  |||||||||    
T  26823644 attctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttcctc------ttcagtttcatatgatttcaaataccaagtg 26823737  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    || ||||| || || |||  |||||||||  | |  ||||| ||  |||||||||| |||||||| | ||||||||||||||||||  ||||||| ||||    
T  26823738 tttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttttgatgatcgtg 26823837  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||||||||| ||||| ||| ||||||| | ||||||||| ||||||||||||| || |||||||||||||||  |||||||    
T  26823838 aacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttttctgccaactat 26823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 26884025 - 26884155
Alignment:
Q  65 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 164  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||  | ||||| |||||  |||||||||| |||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  165 ctggcaagggaatccacaccttcattgatga 195  Q
    ||  |||||||||||||||||||||||||||    
T  26884125 ctaacaagggaatccacaccttcattgatga 26884155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 85 - 280
Target Start/End: Complemental strand, 27531502 - 27531307
Alignment:
Q  85 attcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacacc 184  Q
    |||||||||||||||||||||||| || ||||||   ||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  185 ttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttct 280  Q
    ||||||||||||  ||| || |||||||| |||||||||| |||||||||  | ||||||||| || | |||||||| || ||||| || ||||||    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttct 27531307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 289
Target Start/End: Original strand, 28139368 - 28139627
Alignment:
Q  30 tctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 129  Q
    |||| ||||||||||||  |||| ||||||| || ||  |||| || |||||| | ||||| ||| | || || ||||||||||| ||||||||||||||    
T  28139368 tctctattttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcg 28139467  T
Q  130 taacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 229  Q
    |  |||||| |||||  |||||||||||||||||  || |   ||||||||||| || ||||||||  | || || ||| |||| || |||||   |||     
T  28139468 tttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccg 28139567  T
Q  230 tcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    |||||||  || |||||| |||| |||||||| ||||| ||||||||||| |||||||||    
T  28139568 tcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactat 28139627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 285
Target Start/End: Original strand, 28234429 - 28234646
Alignment:
Q  68 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactg 167  Q
    ||||| || |||||| ||||||| ||  | |||||||| || || || || |||||||||||  | |||||||| |   ||||||| | |||||||  |     
T  28234429 tcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtc 28234528  T
Q  168 gcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcat 267  Q
     |||||||||||||||||||||||||||| | || || ||| |||| |||||||| | |||||||||   ||| |||||| ||||||||||||| |||||    
T  28234529 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28234628  T
Q  268 tcctgtgttttctatcaa 285  Q
    |||||| || ||||||||    
T  28234629 tcctgtcttgtctatcaa 28234646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 285
Target Start/End: Original strand, 28185222 - 28185448
Alignment:
Q  59 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaag 158  Q
    |||||||||||||| || |||||| ||||||| ||  | |||||||| ||||| || || |||||||||||| |  ||||||||||  ||||| | | ||    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  159 ctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctag 258  Q
    |||||  || |||||||||||  |||||||| |||||| | || || ||| |||| || ||||| | | |||||||   ||| |||||| ||||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  259 gatcttcattcctgtgttttctatcaa 285  Q
    ||| |||||||| || || ||||||||    
T  28185422 gattttcattcccgtcttgtctatcaa 28185448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 25579613 - 25579786
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    |||||||||||| ||||| |||||||||||||| |||  |||||| ||  ||||||| || ||||||  || ||||||||| |  |||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  197 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcc 270  Q
      ||| || |||||||| |||||||||| ||||||||| | ||| |||||| |||| |||||||| || |||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcc 25579786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 25481636 - 25481800
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||  ||||||| || ||||||  || ||||||||| |  || |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  197 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggat 261  Q
      ||| || |||||||| |||||||||| ||||||||| | ||| |||||| |||| ||||||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggat 25481800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 28325343 - 28325563
Alignment:
Q  65 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 164  Q
    |||||||| ||||||||| ||||||| ||  | |||||||| || || || || |||||||||||| | |||||||||||  |||||||||||| ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  165 ctggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 264  Q
     | | ||| |||| |  |||||||||||||||   ||||| ||| |||| || ||||| | ||| |||||   ||| |||||| ||||||||||||| ||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  265 cattcctgtgttttctatcaa 285  Q
    ||||||| | || ||||||||    
T  28325543 cattcctattttgtctatcaa 28325563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 285
Target Start/End: Original strand, 28180970 - 28181196
Alignment:
Q  59 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaag 158  Q
    |||||||||||||| || |||||| ||||||| ||  | | |||||| ||||| || ||  ||||||||||| | |||||||||||  ||||| | | ||    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  159 ctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctag 258  Q
    |||||  || |||||||||||  |||||||| |||||| | || || ||| |||| || ||||| | | |||||||   ||| |||||| ||||||||||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  259 gatcttcattcctgtgttttctatcaa 285  Q
    ||| |||||||| || || ||||||||    
T  28181170 gattttcattcccgtcttgtctatcaa 28181196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 26142759 - 26142932
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    |||||||||||| |||||||||||||||||||| |||   ||||| ||  ||||||| || ||||||  || ||||||||| |  || |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  197 cgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcc 270  Q
      ||| ||  ||||||| |||||||||| ||||||||| | ||| |||||| |||| |||||||| || |||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcc 26142932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 285
Target Start/End: Original strand, 28242720 - 28242886
Alignment:
Q  119 agtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatg 218  Q
    |||||||||||| | |||||||||||  |||||||||||| ||||  |   |||||||| | |||||||||||||||| | || || | | |||| ||      
T  28242720 agtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccaggaggtgaca 28242819  T
Q  219 aaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaa 285  Q
    |||| | |||||||||   ||| |||||| ||||||||||||| ||||||||||| || ||||||||    
T  28242820 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaa 28242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 26055820 - 26055957
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||  ||||||| || ||||||  || |||||||||  | || |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  197 cgtgacctgcaaagaggggatgaaatcaaaccatcact 234  Q
      ||| || |||||||| |||||||||| | |||||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcact 26055957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 26075790 - 26075927
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||  ||||||| || ||||||  || |||||||||  | || |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  197 cgtgacctgcaaagaggggatgaaatcaaaccatcact 234  Q
      ||| || |||||||| |||||||||| | |||||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcact 26075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 26139531 - 26139464
Alignment:
Q  50 caatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcagggg 117  Q
    ||||||||||||||  |||| || ||||||||| || |||| |||||||||||||||| |||||||||    
T  26139531 caatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctcaacttcagggg 26139464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 29825958 - 29826085
Alignment:
Q  134 ggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcac 233  Q
    |||||||| ||  |||||||||||||||| |||| ||||  ||| | ||||||||||||||||   || || ||||||||||| ||||||| ||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  234 tcgacaatgccattcaagagtctaggat 261  Q
    | |  || || |||||||| ||||||||    
T  29826058 ttgtgaaggcaattcaagaatctaggat 29826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 25507112 - 25507010
Alignment:
Q  187 cattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaac 286  Q
    |||||||||  |||| ||| ||||||| |||||||||| ||||||| ||| ||  |||||| |||| |||||||| || ||||| ||  |||||||||||    
T  25507112 cattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaac 25507013  T
Q  287 tat 289  Q
    |||    
T  25507012 tat 25507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 26055761 - 26055818
Alignment:
Q  5 tcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcct 62  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||| ||||||||||||||    
T  26055761 tcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 27427967 - 27427886
Alignment:
Q  26 tttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctca 107  Q
    |||||||||||| ||||||| | ||||| ||||| ||  ||||||||||||||||||  ||||| |||| | ||||||||||    
T  27427967 tttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtgttcctca 27427886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25538375 - 25538431
Alignment:
Q  5 tcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcc 61  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||| |||||||||||||    
T  25538375 tcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 26018836 - 26018760
Alignment:
Q  41 atggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcagggg 117  Q
    |||||||  ||||||||||| ||  |||| || ||||||||| || |||| |||||||||||||||| |||||||||    
T  26018836 atggctattcaatcaccttcgtctacctcatccttttcctatggactcacataccaagtgttcctcaacttcagggg 26018760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26048680 - 26048736
Alignment:
Q  5 tcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcc 61  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||| |||||||||||||    
T  26048680 tcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 26048739 - 26048819
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaat 177  Q
    |||||||||||| |||||||||||||||||||| |||  |||||| ||  ||||||| || ||||| | || |||||||||    
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaat 26048819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26069849 - 26069905
Alignment:
Q  5 tcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcc 61  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||| |||||||||||||    
T  26069849 tcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 26069908 - 26069988
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaat 177  Q
    |||||||||||| |||||||||||||||||||| |||  |||||| ||  ||||||| || ||||| | || |||||||||    
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaat 26069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26075731 - 26075787
Alignment:
Q  5 tcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcc 61  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||| |||||||||||||    
T  26075731 tcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26142700 - 26142756
Alignment:
Q  5 tcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcc 61  Q
    ||||| ||||||||||||||  |||| |||||| ||||||||| |||||||||||||    
T  26142700 tcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 25538434 - 25538571
Alignment:
Q  97 agtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgac 196  Q
    |||||||||||| |||||||||||||||||||| |||   ||||| ||  ||||||| || ||||||  || |||||||||    || ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  197 cgtgacctgcaaagaggggatgaaatcaaaccatcact 234  Q
      ||| ||  ||||||| |||||||||| |||||||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcact 25538571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 27531542 - 27531501
Alignment:
Q  24 agtttctctcaattttcatggctaggcaatcaccttcctcat 65  Q
    ||||||||||| || ||||||||| |||||||||||||||||    
T  27531542 agtttctctcagttctcatggctacgcaatcaccttcctcat 27531501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 25481585 - 25481633
Alignment:
Q  13 ttttttcatccagtttctctcaattttcatggctaggcaatcaccttcc 61  Q
    ||||||||||||  |||| |||||| ||||||||| |||||||||||||    
T  25481585 ttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 158; Significance: 4e-84; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 3811 - 3526
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3811 attctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 3712  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||    
T  3711 ttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 3612  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaac 286  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| || |||||||||||||||||||||    
T  3611 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaac 3526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 14743 - 14456
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    ||||||||||||||||| |||||  |||||||||||| |||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14743 attctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 14645  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||| |||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||||| |||||||||||||||  ||    
T  14644 ttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 14545  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||| | || |||||||| || ||||||||||||||||||||||||    
T  14544 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactat 14456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8190 - 8062
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||  |||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  8190 attctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtg 8091  T
Q  101 ttcctcagcttcaggggcagtgacactcg 129  Q
    |||||||| || ||||||| |||||||||    
T  8090 ttcctcagttttaggggcactgacactcg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 14021 - 13734
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||| |  ||||||||||||||||    
T  14021 attctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtg 13922  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  13921 ttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 13822  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaacta 288  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| || |||||||||||||||||||||||    
T  13821 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 13734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 5060 - 4778
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5060 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 4961  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    |||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  4960 ttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 4861  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatc 283  Q
    | || |||||||| |||||||||| |||||| |||  ||| |||||| | || |||||||| || ||||||||||||||||||    
T  4860 atcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatc 4778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 30 - 289
Target Start/End: Complemental strand, 268704 - 268445
Alignment:
Q  30 tctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 129  Q
    ||||| || ||||||||| ||||||||||||||| ||||||||| | || ||| ||||  | ||||| || ||||||| |||||| ||| ||||||||||    
T  268704 tctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcg 268605  T
Q  130 taacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 229  Q
    | | ||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  268604 tgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaacca 268505  T
Q  230 tcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  268504 tcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactat 268445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 28128042 - 28127862
Alignment:
Q  9 actcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcag 108  Q
    |||||||| ||||||| ||| | |||||| ||||||||| |||||||| ||||||      |||| |||||||| ||||||| |||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctc------ttcaatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  109 cttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatga 195  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||| || |||  || ||||||||||||||| |||||||||||    
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatga 28127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 289
Target Start/End: Complemental strand, 28164733 - 28164450
Alignment:
Q  6 caaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcct 105  Q
    ||||||||||| ||||||| ||||| |||||| |||||||||  | ||| | |||||| ||||||||| |||||||| ||||||| ||||||||||||||    
T  28164733 caaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcct 28164634  T
Q  106 cagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctg 205  Q
    ||| || |||||||||||||||||| ||||||| ||||| |||||||| || || |||   | ||||||||| ||||| |||||||||||  |||| ||     
T  28164633 cagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatctt 28164534  T
Q  206 caaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
     | ||||| || ||||||| ||| ||| ||  ||| |||||| || | ||| | || || ||||||||||| ||||||||||||    
T  28164533 gagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactat 28164450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 306 - 19
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  306 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 207  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  206 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 107  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaacta 288  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| || |||||||||||||||||||||||    
T  106 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 7323 - 7610
Alignment:
Q  1 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 100  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  7323 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 7422  T
Q  101 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtg 200  Q
    ||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||||| |||||||||| | |||||||||||||||  ||    
T  7423 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 7522  T
Q  201 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaacta 288  Q
    | || |||||||| |||||||||| ||||||||||  ||| |||||  |||| |||||||| || |||||||||||||||||||||||    
T  7523 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 39 - 289
Target Start/End: Complemental strand, 29274121 - 29273871
Alignment:
Q  39 tcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttt 138  Q
    ||||||||| ||||||||||||||| ||||||||| | || ||| ||||||||||||| || ||||||| ||| || ||| ||||||||||| |||||||    
T  29274121 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 29274022  T
Q  139 tactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgac 238  Q
    || ||| |||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||||    
T  29274021 tattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgac 29273922  T
Q  239 aatgccattcaagagtctaggatcttcattcctgtgttttctatcaactat 289  Q
    |||| |||| |||||||||| || || ||||||||||||||||||||||||    
T  29273921 aatgtcattgaagagtctagaatttttattcctgtgttttctatcaactat 29273871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 31903732 - 31903882
Alignment:
Q  84 gattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacac 183  Q
    ||||||| ||| | |||||||||||||| || |||   ||||||||  | |||||||||||  |||||||||||||||||  ||  ||||||||||||||    
T  31903732 gattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacac 31903831  T
Q  184 cttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcact 234  Q
    ||| ||||| ||    || || ||||||||  ||||||||| |||||||||    
T  31903832 ctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 289
Target Start/End: Complemental strand, 58607 - 58383
Alignment:
Q  65 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 164  Q
    |||||||| || |||||| ||||||| || || |||||||| ||||| || ||  ||||||||||  | |||||||||||  ||||||||| |||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  165 ctggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 264  Q
     || |||||||||||  |||||||| |||||| | || || ||| |||| || ||||| | |||||||||   ||| |||||| ||||||||||||| ||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  265 cattcctgtgttttctatcaactat 289  Q
    |||||| || || ||||||||||||    
T  58407 cattcccgtcttgtctatcaactat 58383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 285
Target Start/End: Original strand, 34590 - 34807
Alignment:
Q  68 tcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactg 167  Q
    ||||| || |||||| ||||||| ||  | |||||||| || || || || |||||||||||  | |||||||| |   ||||||| | |||||||  |     
T  34590 tcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtc 34689  T
Q  168 gcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcat 267  Q
     |||||||||||||||||||||||||||| | || || ||| |||| |||||||| | |||||||||   ||| |||||| ||||||||||||| |||||    
T  34690 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 34789  T
Q  268 tcctgtgttttctatcaa 285  Q
    |||||| || ||||||||    
T  34790 tcctgtcttgtctatcaa 34807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 116658 - 116878
Alignment:
Q  65 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 164  Q
    |||||||| ||||||||| ||||||| ||  | |||||||| || || || || |||||||||||| | |||||||||||  |||||||||||| ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  165 ctggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 264  Q
     | | ||| |||| |  |||||||||||||||   ||||| ||| |||| || ||||| | ||| |||||   ||| |||||| ||||||||||||| ||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  265 cattcctgtgttttctatcaa 285  Q
    ||||||| | || ||||||||    
T  116858 cattcctattttgtctatcaa 116878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 285
Target Start/End: Original strand, 42882 - 43048
Alignment:
Q  119 agtgacactcgtaacggttttactgggcatctctacaaagctcttactggcaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatg 218  Q
    |||||||||||| | |||||||||||  |||||||||||| ||||  |   |||||||| | |||||||||||||||| | || || | | |||| ||      
T  42882 agtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccaggaggtgaca 42981  T
Q  219 aaatcaaaccatcactcgacaatgccattcaagagtctaggatcttcattcctgtgttttctatcaa 285  Q
    |||| | |||||||||   ||| |||||| ||||||||||||| ||||||||||| || ||||||||    
T  42982 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaa 43048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 5925 - 5992
Alignment:
Q  50 caatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcagggg 117  Q
    ||||||||||||||  |||| || ||||||||| || |||| |||||||||||||||| |||||||||    
T  5925 caatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctcaacttcagggg 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 59396 - 59477
Alignment:
Q  26 tttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctca 107  Q
    |||||||||||| ||||||| | ||||| ||||| ||  ||||||||||||||||||  ||||| |||| | ||||||||||    
T  59396 tttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtgttcctca 59477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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