View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19829_high_52 (Length: 202)
Name: NF19829_high_52
Description: NF19829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19829_high_52 |
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Alignment Details
Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 25467618 - 25467467
Alignment:
| Q |
39 |
atacttaaccctgaggtactccaccccattccattgtccaaaagattctagccccaggggtcccc--acccactctcagtacc-----actcacattttc |
131 |
Q |
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| T |
25467618 |
atacttaaccctgaggtattccaccccattccattgtccaaaagattctagccccaggggtccccccacccactctcagtaccgtaccactcacattttc |
25467519 |
T |
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| Q |
132 |
cgcgccaaagtaaagaaacaacaaagattgttcttcttcctcaagtaaccac |
183 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
25467518 |
cgcgccaaagtaaagaaaaaacaaagattgttcttcttcctcaagtaaccac |
25467467 |
T |
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