View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19829_low_17 (Length: 382)
Name: NF19829_low_17
Description: NF19829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19829_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 18 - 351
Target Start/End: Complemental strand, 34901504 - 34901171
Alignment:
| Q |
18 |
atgatgtcatagtaaaagggataaatcaaaatagagaggaaggaagtgagacagattatatttgcagttcacttatttgttttgtgatggatttaataca |
117 |
Q |
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| T |
34901504 |
atgatgtcatagtaaaagggataaatcaaaatagagaggaaggaagtgagacagattatatttgcagttcacttatttgttttgtgatggatttaataca |
34901405 |
T |
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| Q |
118 |
agttataaagatggatttttcattgacaatgaatgttgatacaatagtcaatatggttatttagagaatggtgacatggaaaaacattttgctggtcgaa |
217 |
Q |
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| T |
34901404 |
agttataaagatggatttttcattgagaatgaatgttgatacaatagtcaatatggttatttagagaatggtgacatggaaaaacatttttatggtcaaa |
34901305 |
T |
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| Q |
218 |
tgttcgatcagtcagtggttaattaagatgaaaatgtcatttgatttagggatgatgtacttgaagcaacaattgatacacatattgtagttcatcaagc |
317 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34901304 |
tgtttgatcagtcagtggttaattaagatgaaaatgtcatttgatttagggatgatgtacttgaagcaacaattgatacacatattgtagttcatcaagc |
34901205 |
T |
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| Q |
318 |
aatttgttatgaatctcaagatgattttacccaa |
351 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
34901204 |
aatttgttatgaatctcaagatgattttacccaa |
34901171 |
T |
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