View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19831_low_2 (Length: 395)
Name: NF19831_low_2
Description: NF19831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19831_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 24 - 378
Target Start/End: Complemental strand, 45328734 - 45328380
Alignment:
| Q |
24 |
aatcatctgagatacaatccatcaacttcactccacaacaacaattattttctcatcacaaacnnnnnnnnctcagccgctgcaaaacagcaccagctat |
123 |
Q |
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| T |
45328734 |
aatcatctgagatacaatccatcaacttcactccacaacaacaatcattttctcatcacaaacaaaaaaaactcagccgctgcaaaacagcaccagctat |
45328635 |
T |
|
| Q |
124 |
gttcattctcccacaccttaaacccatcaatgaccaacctcaacttcccaaacctcaaaccaattccatcattcgacaaggcatttggcttctccttata |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328634 |
gttcattctcccacaccttaaacccatcaatgaccaacctcaacttcccaaacctcaaaccaattccatcattcgacaaggcatttggcttctccttata |
45328535 |
T |
|
| Q |
224 |
tacctctctgtcggtgtcataatatactctttcaacacaaaaaatttctctggcattgaaactcaccctgttgttgatgctctttatttttgtatagtca |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328534 |
tacctctctgtcggtgtcataatatactctttcaacacaaaaaatttctctggcattgaaactcaccctgttgttgatgctctttatttttgtatagtca |
45328435 |
T |
|
| Q |
324 |
ccatgtgtacaattggttatggagacatagctcctttaacaccaatgactaaact |
378 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328434 |
ccatgtgtacaattggttatggagacatagctcctttaacaccaatgactaaact |
45328380 |
T |
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